Pregenerated sensors for MGAT4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026110Ensembl transcript IDs: ENSMUST00000042161.15, ENSMUST00000143636.8, ENSMUST00000148047.2, ENSMUST00000149791.8, ENSMUST00000151952.8, ENSMUST00000154819.8
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGAGGAAGCAACTGGCACTGAGGGAGCAGGAGAGCGCCTGATGTaGTGGAAGACAGGAGAGCTGGCCTCCAGAGCCTGGAGTGTATTG | + |
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Preference number: 1 (lower is better) Translates to: EEEATGTEGAGERLM*WKTGELASRAWSVL Trigger: CAATACACTCCAGGCTCTGGAGGCCAGCTCTCCTGTCTTCCATCACATCAGGCGCTCTCCTGCTCCCTCAGTGCCAGTTGCTTCCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | CACTTGGTGGGTAACAGAGCCTCTGGCTCCTTAAGGCAGGTGACCTaGAGTCATTTAGGGGAGCCCCTTCCACTTAGACCAGCGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: HLVGNRASGSLRQVT*SHLGEPLPLRPAML Trigger: CAGCATCGCTGGTCTAAGTGGAAGGGGCTCCCCTAAATGACTGCAGGTCACCTGCCTTAAGGAGCCAGAGGCTCTGTTACCCACCAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | CCGTCTCCCCAACTCAAAGACAGACTGTGGAGGAAGTGCTCTAACTaGGCTGCCCTTGACTCCACTGCGGAAAACAGTGGCTTAGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: PSPQLKDRLWRKCSN*AALDSTAENSGLVD Trigger: GTCCACTAAGCCACTGTTTTCCGCAGTGGAGTCAAGGGCAGCTCAGTTAGAGCACTTCCTCCACAGTCTGTCTTTGAGTTGGGGAGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | GGCTGGCTGCTCAAGGATTTCCATGTCCAAGCCTGGGTAAGTGTCTaGGTCAAATTGTCCTATGGCAAAAGGTCTGCAGGTCCCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: GWLLKDFHVQAWVSV*VKLSYGKRSAGPTW Trigger: CCAAGTGGGACCTGCAGACCTTTTGCCATAGGACAATTTGACCCAGACACTTACCCAGGCTTGGACATGGAAATCCTTGAGCAGCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | ACGGGGCCCCTGTGCCCATCTGCATGGTTTCACAGTCTGTTATCCTaGTGCTGCACACTTGAGTGTGGGAAGATAGTGGGATTTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: TGPLCPSAWFHSLLS*CCTLECGKIVGFIC Trigger: ACAAATAAATCCCACTATCTTCCCACACTCAAGTGTGCAGCAGCAGGATAACAGACTGTGAAACCATGCAGATGGGCACAGGGGCCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | TTTCCATGTCCAAGCCTGGGTAAGTGTCTGGGTCAAATTGTCCTATaGCAAAAGGTCTGCAGGTCCCACTTGGTGGGTAACAGAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: FPCPSLGKCLGQIVL*QKVCRSHLVGNRAS Trigger: AGAGGCTCTGTTACCCACCAAGTGGGACCTGCAGACCTTTTGCCATAGGACAATTTGACCCAGACACTTACCCAGGCTTGGACATGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | CTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCACCTGCTaGCTGTCTGCTCTCGCACTTGCAGTTTTAGGTAATGCAGAAACT | + |
|
Preference number: 1 (lower is better) Translates to: LLRTRVHTTHIQVTC*LSALALAVLGNAET Trigger: AGTTTCTGCATTACCTAAAACTGCAAGTGCGAGAGCAGACAGGCAGCAGGTGACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | CATGAAGACATTGTGAGCCAAATATGTGCAGAGAAAAGAACCTGGTaGAACCTAGCAAAGGGGTTCCTTGGGCTGCTCCAAGACCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: HEDIVSQICAEKRTW*NLAKGFLGLLQDRL Trigger: GAGACGGTCTTGGAGCAGCCCAAGGAACCCCTTTGCTAGGTTGCACCAGGTTCTTTTCTCTGCACATATTTGGCTCACAATGTCTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | TTTAGAGTTCTGCTGCTGATGTCTCTCACTTCTGCCAGCCTGACATaGCTCTCAAGATTGGGCCAATCACCCACAGATGTGGTCACAGTT | + |
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Preference number: 1 (lower is better) Translates to: FRVLLLMSLTSASLT*LSRLGQSPTDVVTV Trigger: AACTGTGACCACATCTGTGGGTGATTGGCCCAATCTTGAGAGCCATGTCAGGCTGGCAGAAGTGAGAGACATCAGCAGCAGAACTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | ACCCATGAAGACATTGTGAGCCAAATATGTGCAGAGAAAAGAACCTaGTGCAACCTAGCAAAGGGGTTCCTTGGGCTGCTCCAAGACCGT | + |
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Preference number: 1 (lower is better) Translates to: THEDIVSQICAEKRT*CNLAKGFLGLLQDR Trigger: ACGGTCTTGGAGCAGCCCAAGGAACCCCTTTGCTAGGTTGCACCAGGTTCTTTTCTCTGCACATATTTGGCTCACAATGTCTTCATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | GGATGCACAAACACTCTGTGGACACAGCATTTACCTCCACGTTCATaGCACAGCGGAGCAAATCATGCTATGGAAACAGAAGTGCTACGG | + |
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Preference number: 1 (lower is better) Translates to: GCTNTLWTQHLPPRS*HSGANHAMETEVLR Trigger: CCGTAGCACTTCTGTTTCCATAGCATGATTTGCTCCGCTGTGTCATGAACGTGGAGGTAAATGCTGTGTCCACAGAGTGTTTGTGCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | CCCATCTGCATGGTTTCACAGTCTGTTATCCTGCTGCTGCACACTTaGGTGTGGGAAGATAGTGGGATTTATTTGTGGGCACAGGGCATA | + |
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Preference number: 1 (lower is better) Translates to: PICMVSQSVILLLHT*VWEDSGIYLWAQGI Trigger: TATGCCCTGTGCCCACAAATAAATCCCACTATCTTCCCACACTCAAGTGTGCAGCAGCAGGATAACAGACTGTGAAACCATGCAGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | ATTACACCTGTCACAGCCGAAGCTCTTGCAGGTGTGTTCAGCCTGTaGCCCGGGACAGCAATGAATGGCACAATACAAGATTGTAAACTT | + |
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Preference number: 1 (lower is better) Translates to: ITPVTAEALAGVFSL*PGTAMNGTIQDCKL Trigger: AAGTTTACAATCTTGTATTGTGCCATTCATTGCTGTCCCGGGCCACAGGCTGAACACACCTGCAAGAGCTTCGGCTGTGACAGGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | CATATTCCTAGGATCCAATATGGTGGCTGCTGGCCATGTGGCCACTaGGCACTCCAAAGGCTGCCAACTCAACTTTTCATTTCAACAGAT | + |
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Preference number: 1 (lower is better) Translates to: HIPRIQYGGCWPCGH*ALQRLPTQLFISTD Trigger: ATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTTGGAGTGCTCAGTGGCCACATGGCCAGCAGCCACCATATTGGATCCTAGGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | AATATGGTGGCTGCTGGCCATGTGGCCACTGAGCACTCCAAAGGCTaGCAACTCAACTTTTCATTTCAACAGATGTGTTTTGTGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: NMVAAGHVATEHSKG*QLNFSFQQMCFVAS Trigger: AGAAGCCACAAAACACATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTTGGAGTGCTCAGTGGCCACATGGCCAGCAGCCACCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | GTACGCTTACCAGCTGGAGCAGTTCCAATAAAGAACAGAATGCTATaGAAGCTAAAGGACCCCACTCTTGCTATTCTGGGACCAGTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: VRLPAGAVPIKNRML*KLKDPTLAILGPVA Trigger: AGCAACTGGTCCCAGAATAGCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCTCCAGCTGGTAAGCGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR GCA 90 bp | GTTTGTGTCAAGTTCAAATTGGAGGACAGCTTAGCTTCAAATGAATaGAGTTATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAA | + |
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Preference number: 1 (lower is better) Translates to: VCVKFKLEDSLASNE*SYPWEESLSAWRQQ Trigger: TTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGATAACTGCATTCATTTGAAGCTAAGCTGTCCTCCAATTTGAACTTGACACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| 3UTR TCA 90 bp | ATCTTGACTGTCCCACCAAAACACACACCTTCACCTGCACTACGATaGATCCATAGGTCTATTTTTAACCACAGCAGCAGGATACATTAC | + |
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Preference number: 1 (lower is better) Translates to: ILTVPPKHTPSPALR*IHRSIFNHSSRIHY Trigger: GTAATGTATCCTGCTGCTGTGGTTAAAAATAGACCTATGGATTCATCGTAGTGCAGGTGAAGGTGTGTGTTTTGGTGGGACAGTCAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CCA 90 bp | CCAGCAAGTCAACACAAAGGTGGGAATTTTTCTTCTCCATCAGTCTaGTCTAAAATACCGTTCATCATTCTTTCCTGTACTTCTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: PASQHKGGNFSSPSV*SKIPFIILSCTSGR Trigger: CCTGCCAGAAGTACAGGAAAGAATGATGAACGGTATTTTAGACCAGACTGATGGAGAAGAAAAATTCCCACCTTTGTGTTGACTTGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | AACCTTTGCCAACAACAACACTTTGCACATAAGCCAACTTTTCCTTaGGGGACAGCACTGTTGAGAACTGTAGTTCTCGTAATTATGAAA | + |
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Preference number: 1 (lower is better) Translates to: NLCQQQHFAHKPTFP*GTALLRTVVLVIMK Trigger: TTTCATAATTACGAGAACTACAGTTCTCAACAGTGCTGTCCCTCAAGGAAAAGTTGGCTTATGTGCAAAGTGTTGTTGTTGGCAAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR TCA 90 bp | AAACTAGTCTACCGCAGGCAATCATATATGGAGACTTCTCAGGACTaGCAGATTCTGTTGCTTTTTAAAAATGCCACAAATCTAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: KLVYRRQSYMETSQD*QILLLFKNATNLAT Trigger: TGTGGCTAGATTTGTGGCATTTTTAAAAAGCAACAGAATCTGTCAGTCCTGAGAAGTCTCCATATATGATTGCCTGCGGTAGACTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCAGCCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTGCTGTACACGAGAGCCAGAGAAGACTaGCAACTGTTGCTCGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LPAGTSHSPRPPPHLLYTRARED*QLLLGL Trigger: AAGGCCGAGCAACAGTTGCCAGTCTTCTCTGGCTCT...CGTGTACAGCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGGCTGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | GACGGAGGCTACCAGCCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTGCCACACTGGTTTTCTGTaGCTACACACCATACACAGT | + |
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Preference number: 2 (lower is better) Translates to: DGGYQPGPPTALGLHHTCHTGFL*LHTIHS Trigger: ACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTG...GCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGGCTGGTAGCCTCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | CTACCAGCCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTGCTGTACACGTTCCCACCTGGACAATaGCAGTCACACTGGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPAGTSHSPRPPPHLLYTFPPGQ*QSHWFS Trigger: AGAAAACCAGTGTGACTGTCATTGTCCAGGTGGGAA...CGTGTACAGCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGGCTGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCGATGCCAACCGAGCCTaGCAAGGCTCAGGCGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVDANRA*QGSGVF Trigger: GAACACGCCTGAGCCTTGGCAGGCTCGGTTGGCATC...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CAA 90 bp | GTCAAAAACCATCAGTCAGCCGGGCATGGTGATACACATCAGCACTaGAGAGGCAGAACCGGGAGAATCGGCCTGGGGTGCAAGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VKNHQSAGHGDTHQH*RGRTGRIGLGCKVR Trigger: TCTCACCTTGCACCCCAGGCCGATTCTCCCGGTTCTGCCTCTCAAGTGCTGATGTGTATCACCATGCCCGGCTGACTGATGGTTTTTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCCTATGGCAAAAGGTCTaGAGGTCCCACTTGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVLWQKV*RSHLVG Trigger: ACCCACCAAGTGGGACCTGCAGACCTTTTGCCATAG...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCCCAGGAACTAGCTCATaGGGAAAGGGGGAATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVPGTSS*GKGEFL Trigger: AAGGAATTCCCCCTTTCCCCATGAGCTAGTTCCTGG...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCGCTAGGAGAGAGATGTaGGCAACCTGGCTAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVARREM*ATWLVN Trigger: ATTAACTAGCCAGGTTGCTCACATCTCTCTCCTAGC...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCAGGAGAGCGCCTGATGTaGTGGAAGACAGGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: MLGRRMTLTCSRVILTVPGERLM*WKTGEL Trigger: CAGCTCTCCTGTCTTCCATCACATCAGGCGCTCTCC...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCCTTACAAAGCTAAAGTaGAGGTGTTTACCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVLTKLK*RCLPGW Trigger: CCAGCCTGGTAAACACCTTCACTTTAGCTTTGTAAG...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | GATAGAGTACAGGGGCACGGGCAGCAAATCCTTGAGGTGTCTTTGTTTGTTTTACTAACGGGGCCCCTGTaGCCATCTGCATGGTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: DRVQGHGQQILEVSLFVLLTGPL*PSAWFH Trigger: GTGAAACCATGCAGATGGGCACAGGGGCCCCGTTAG...TAAAACAAACAAAGACACCTCAAGGATTTGCTGCCCGTGCCCCTGTACTCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGAAGACAGGAGAGCTGGCCTCCAGAGCCTGGAGTGTATTGGAGAACACACGTAGAGCCTTGTAAGTaGATATGCTCAAAGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DGRQESWPPEPGVYWRTHVEPCK*ICSKTH Trigger: GTGGGTCTTTGAGCATATCCACTTACAAGGCTCTAC...GTGTGTTCTCCAATACACTCCAGGCTCTGGAGGCCAGCTCTCCTGTCTTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR CAA 90 bp | CTCAAGGATTTCCATGTCCAAGCCTGGGTAAGTGTCTGGGTCAAATaGTCCTATGGCAAAAGGTCTGCAGGTCCCACTTGGTGGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: LKDFHVQAWVSVWVK*SYGKRSAGPTWWVT Trigger: TGTTACCCACCAAGTGGGACCTGCAGACCTTTTGCCATAGGACAATTTGACCCAGACACTTACCCAGGCTTGGACATGGAAATCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCGAGCACTCCAAAGGCTaGCAACTCAACTTTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: RAAGALLRTRVHTTHIQVEHSKG*QLNFSF Trigger: AAATGAAAAGTTGAGTTGGCAGCCTTTGGAGTGCTC...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCAGAATGCAGTTATCCATaGGAAGAGTCCCTGTCCGCG | + |
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Preference number: 2 (lower is better) Translates to: MLGRRMTLTCSRVILTVPECSYP*EESLSA Trigger: CGCGGACAGGGACTCTTCCCATGGATAACTGCATTC...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCCATGGACTCTGTAGATaGCAGCCTCACGCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCHGLCR*QPHAAL Trigger: CAGTGCAGCGTGAGGCTGTCATCTACAGAGTCCATG...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTCATTTAGGGGAGCCCCTTCCACTTAGACCAGCGATGCTGTTTAGAGTTAGCGCTACTTGGGACTaGAAAGTGAGGATGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: CSHLGEPLPLRPAMLFRVSATWD*KVRMHK Trigger: TTTGTGCATCCTCACTTTGCAGTCCCAAGTAGCGCT...AACTCTAAACAGCATCGCTGGTCTAAGTGGAAGGGGCTCCCCTAAATGACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTAGGAGAGCGCCTGATGTaGTGGAAGACAGGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: MDSCSTETIMKGTVNRTLGERLM*WKTGEL Trigger: CAGCTCTCCTGTCTTCCATCACATCAGGCGCTCTCC...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTCATTTAGGGGAGCCCCTTCCACTTAGACCAGCGATGCTGTTTAGAGTTCAGCGGAGCAAATCATaGTATGGAAACAGAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CSHLGEPLPLRPAMLFRVQRSKS*YGNRSA Trigger: AGCACTTCTGTTTCCATAGCATGATTTGCTCCGCTG...AACTCTAAACAGCATCGCTGGTCTAAGTGGAAGGGGCTCCCCTAAATGACTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCACCTTGTAAGTGGATATaGTCAAAGACCCACGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: MLGRRMTLTCSRVILTVPPCKWI*SKTHAG Trigger: TCCTGCGTGGGTCTTTGAGCATATCCACTTACAAGG...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTAGCAGGTCCCACTTGGTaGGTAACAGAGCCTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MDSCSTETIMKGTVNRTLAGPTW*VTEPLA Trigger: AGCCAGAGGCTCTGTTACCCACCAAGTGGGACCTGC...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR GCA 90 bp | GATAGAGTACAGGGGCACGGGCAGCAAATCCTTGAGGTGTCTTTGTTTGTTTTACACAGTCTGTTATCCTaGTGCTGCACACTTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: DRVQGHGQQILEVSLFVLHSLLS*CCTLEC Trigger: ACACTCAAGTGTGCAGCAGCAGGATAACAGACTGTG...TAAAACAAACAAAGACACCTCAAGGATTTGCTGCCCGTGCCCCTGTACTCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAGGACACACCCAACAGCATTACTCAGAAAACAGTATCTGAACTCCAAAACGAATGCAGTTATCCATaGGAAGAGTCCCTGTCCGCG | + |
|
Preference number: 2 (lower is better) Translates to: QQDTPNSITQKTVSELQNECSYP*EESLSA Trigger: CGCGGACAGGGACTCTTCCCATGGATAACTGCATTC...GTTTTGGAGTTCAGATACTGTTTTCTGAGTAATGCTGTTGGGTGTGTCCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGCATCTAGAACCAATCTaGAATGGCAGTGCACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ESHHPHERNYEREKESVEHLEPI*NGSALE Trigger: TTCCAGTGCACTGCCATTCCAGATTGGTTCTAGATG...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGCACACTGGTTTTCTGTaGCTACACACCATACACAGT | + |
|
Preference number: 2 (lower is better) Translates to: ESHHPHERNYEREKESVEHTGFL*LHTIHS Trigger: ACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTG...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCAGTAGAGCCTTGTAAGTaGATATGCTCAAAGACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: MLGRRMTLTCSRVILTVPVEPCK*ICSKTH Trigger: GTGGGTCTTTGAGCATATCCACTTACAAGGCTCTAC...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCTTCCCACCTGGACAATaGCAGTCACACTGGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCFPPGQ*QSHWFS Trigger: AGAAAACCAGTGTGACTGTCATTGTCCAGGTGGGAA...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCAAAGGGGGAATTCCTTaGATGAAGGAAAGGACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCKGGIP*MKERTW Trigger: CCAAGTCCTTTCCTTCATTCAAGGAATTCCCCCTTT...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAGAGTACAGGGGCACGGGCAGCAAATCCTTGAGGTGTCTTTGTTTGTTTTAGAGCAAATCATGCTATaGAAACAGAAGTGCTACGGT | + |
|
Preference number: 2 (lower is better) Translates to: DRVQGHGQQILEVSLFVLEQIML*KQKCYG Trigger: ACCGTAGCACTTCTGTTTCCATAGCATGATTTGCTC...TAAAACAAACAAAGACACCTCAAGGATTTGCTGCCCGTGCCCCTGTACTCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCCAGCTTAGCTTCAAATaGATGCAGTTATCCATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCQLSFK*MQLSMG Trigger: TCCCATGGATAACTGCATTCATTTGAAGCTAAGCTG...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCGAGCACTCCAAAGGCTaGCAACTCAACTTTTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCEHSKG*QLNFSF Trigger: AAATGAAAAGTTGAGTTGGCAGCCTTTGGAGTGCTC...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATATAACCCATCTAGAACCAATCTaGAATGGCAGTGCACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QSHWFSVATHHTQYSNITHLEPI*NGSALE Trigger: TTCCAGTGCACTGCCATTCCAGATTGGTTCTAGATG...GGTTATATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAATGATTTCAAGAACCTTTGTTCAAACACACTCTGATGGACATAACACACGTTGTACACGCAGTTTCTaGAGAGCCAGAGAAGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: PMISRTFVQTHSDGHNTRCTRSF*RAREDW Trigger: CCAGTCTTCTCTGGCTCTCCAGAAACTGCGTGTACA...ACGTGTGTTATGTCCATCAGAGTGTGTTTGAACAAAGGTTCTTGAAATCATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTAGGTCAAATTGTCCTATaGCAAAAGGTCTGCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MDSCSTETIMKGTVNRTLGQIVL*QKVCRS Trigger: GGACCTGCAGACCTTTTGCCATAGGACAATTTGACC...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCAGGGCTTGCTGGGAATaGGTTTATTCTTATGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCRACWE*VYSYVK Trigger: TTTGACATAAGAATAAACTCATTCCCAGCAAGCCCT...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGCTGCCAACTCAACTTTTCATTTCAACAGATGTGTTTTGTGGCTTCTGTATGGAGTTTCAAGGCTTaGCCTTCTGAACTCACAACC | + |
|
Preference number: 2 (lower is better) Translates to: KGCQLNFSFQQMCFVASVWSFKA*PSELTT Trigger: GGTTGTGAGTTCAGAAGGCCAAGCCTTGAAACTCCA...TACAGAAGCCACAAAACACATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGCTGCCAACTCAACTTTTCATTTCAACAGATGTGTTTTGTGGCTTCTGTACAGCTTAGCTTCAAATaGATGCAGTTATCCATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGCQLNFSFQQMCFVASVQLSFK*MQLSMG Trigger: TCCCATGGATAACTGCATTCATTTGAAGCTAAGCTG...TACAGAAGCCACAAAACACATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTATCAGAAAACAGTATCTaGACTCCAAAACCTACCACA | + |
|
Preference number: 2 (lower is better) Translates to: MDSCSTETIMKGTVNRTLSENSI*TPKPTT Trigger: TGTGGTAGGTTTTGGAGTTCAGATACTGTTTTCTGA...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGGACACACCCAACAGCATTACTCAGAAAACAGTATCTGAACTCCAAAACCCCTCGAGAGAACATTaGTCTTTTAAAATCTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: QQDTPNSITQKTVSELQNPSREH*SFKILI Trigger: AATCAAGATTTTAAAAGACCAATGTTCTCTCGAGGG...GTTTTGGAGTTCAGATACTGTTTTCTGAGTAATGCTGTTGGGTGTGTCCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGCATAGGAAAAGTGCCAAATGCAGTACTAATTATTAAAAAGCTGAAGGAAAAGAAAAGCTTCAGCTaGGCTTTGACATGCACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QGIGKVPNAVLIIKKLKEKKSFS*ALTCTV Trigger: TACTGTGCATGTCAAAGCCCAGCTGAAGCTTTTCTT...TTCCTTCAGCTTTTTAATAATTAGTACTGCATTTGGCACTTTTCCTATGCCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | CCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTaGTGTACACGCAGTTTCTGGAGAGCCAGAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGPPTALGLHHT*CTRSFWRARED Trigger: GTCTTCTCTGGCTCTCCAGAAACTGCGTGTACAGCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | GCAACCTGGCTAGTTAATCCAGATGCCAACCGAGCCTaGCAAGGCTCAGGCGTGTTCCAGGCACCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: ATWLVNPDANRA*QGSGVFQAPGT Trigger: AGTTCCTGGTGCCTGGAACACGCCTGAGCCTTGGCAGGCTCGGTTGGCATCTGGATTAACTAGCCAGGTTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CTAGGCCTCCACCACACCTGCTGTACACGCAGTTTCTaGAGAGCCAGAGAAGACTGGCAACTGTTGCTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLHHTCCTRSF*RAREDWQLLLG Trigger: GCCGAGCAACAGTTGCCAGTCTTCTCTGGCTCTCCAGAAACTGCGTGTACAGCAGGTGTGGTGGAGGCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | GGTAACAGAGCCTCTGGCTCCTTAAGGCAGGTGACCTaGAGTCATTTAGGGGAGCCCCTTCCACTTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: GNRASGSLRQVT*SHLGEPLPLRP Trigger: TGGTCTAAGTGGAAGGGGCTCCCCTAAATGACTGCAGGTCACCTGCCTTAAGGAGCCAGAGGCTCTGTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | AAATGGCTTCCACTCAGTTCTGTGTGTCCCATACACTaGGCAACTAAGAAAGCCCCCGACGGAGGCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KWLPLSSVCPIH*ATKKAPDGGYQ Trigger: CTGGTAGCCTCCGTCGGGGGCTTTCTTAGTTGCCCAGTGTATGGGACACACAGAACTGAGTGGAAGCCATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CTGCTGCTGATGTCTCTCACTTCTGCCAGCCTGACATaGCTCTCAAGATTGGGCCAATCACCCACAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLMSLTSASLT*LSRLGQSPTDV Trigger: CACATCTGTGGGTGATTGGCCCAATCTTGAGAGCCATGTCAGGCTGGCAGAAGTGAGAGACATCAGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | GTCACAGCCGAAGCTCTTGCAGGTGTGTTCAGCCTGTaGCCCGGGACAGCAATGAATGGCACAATACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VTAEALAGVFSL*PGTAMNGTIQD Trigger: ATCTTGTATTGTGCCATTCATTGCTGTCCCGGGCCACAGGCTGAACACACCTGCAAGAGCTTCGGCTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | CAACTCAAAGACAGACTGTGGAGGAAGTGCTCTAACTaGGCTGCCCTTGACTCCACTGCGGAAAACAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QLKDRLWRKCSN*AALDSTAENSG Trigger: GCCACTGTTTTCCGCAGTGGAGTCAAGGGCAGCTCAGTTAGAGCACTTCCTCCACAGTCTGTCTTTGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | AGGACCAGGGTTCACACTACACACATTCAGGTCACCTaGTGCCTGTCTGCTCTCGCACTTGCAGTTTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTRVHTTHIQVT*CLSALALAVLG Trigger: ACCTAAAACTGCAAGTGCGAGAGCAGACAGGCAGCAGGTGACCTGAATGTGTGTAGTGTGAACCCTGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CCAAGCCTGGGTAAGTGTCTGGGTCAAATTGTCCTATaGCAAAAGGTCTGCAGGTCCCACTTGGTGGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLGKCLGQIVL*QKVCRSHLVGN Trigger: GTTACCCACCAAGTGGGACCTGCAGACCTTTTGCCATAGGACAATTTGACCCAGACACTTACCCAGGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAAGACAGGAGAGCTGGCCTCCAGAGCCTGGAGTGTATTGGAGAACACACAGCTTCAGCTGGGCTTaGACATGCACAGTAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DGRQESWPPEPGVYWRTHSFSWA*TCTVVF Trigger: AAACACTACTGTGCATGTCAAAGCCCAGCTGAAGCT...GTGTGTTCTCCAATACACTCCAGGCTCTGGAGGCCAGCTCTCCTGTCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAAGACAGGAGAGCTGGCCTCCAGAGCCTGGAGTGTATTGGAGAACACACGATAGTGGGATTTATTaGTGGGCACAGGGCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DGRQESWPPEPGVYWRTHDSGIY*WAQGIG Trigger: TCCTATGCCCTGTGCCCACAAATAAATCCCACTATC...GTGTGTTCTCCAATACACTCCAGGCTCTGGAGGCCAGCTCTCCTGTCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | AGGATCCAATATGGTGGCTGCTGGCCATGTGGCCACTaGGCACTCCAAAGGCTGCCAACTCAACTTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RIQYGGCWPCGH*ALQRLPTQLFI Trigger: AATGAAAAGTTGAGTTGGCAGCCTTTGGAGTGCTCAGTGGCCACATGGCCAGCAGCCACCATATTGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | GACACAGCGGAGCAAATCATGCTATGGAAACAGAAGTaGTACGGTCGTCTTTCTCCGAGTCCCATACCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DTAEQIMLWKQK*YGRLSPSPIPN Trigger: GTTGGGTATGGGACTCGGAGAAAGACGACCGTAGCACTTCTGTTTCCATAGCATGATTTGCTCCGCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | CTGTGCCCATCTGCATGGTTTCACAGTCTGTTATCCTaGTGCTGCACACTTGAGTGTGGGAAGATAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCPSAWFHSLLS*CCTLECGKIVG Trigger: TCCCACTATCTTCCCACACTCAAGTGTGCAGCAGCAGGATAACAGACTGTGAAACCATGCAGATGGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CCTTACCACGTGAGGATGAGGACAGTGTTTAACCTCTaGGTTCCTTTCCTTCAAGGCTGTGGCAGCATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PYHVRMRTVFNL*VPFLQGCGSMV Trigger: AACCATGCTGCCACAGCCTTGAAGGAAAGGAACCCAGAGGTTAAACACTGTCCTCATCCTCACGTGGTAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | TTCTTATGTCAAAAACCATCAGTCAGCCGGGCATGGTaGTACACATCAGCACTTGAGAGGCAGAACCGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLCQKPSVSRAW*YTSALERQNRE Trigger: CTCCCGGTTCTGCCTCTCAAGTGCTGATGTGTATCACCATGCCCGGCTGACTGATGGTTTTTGACATAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | CATAGCTCGGAATGCCCTTTTCTAGAAGTCTTGAACTaGGGCCTGATCCCTTACCACGTGAGGATGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: HSSECPFLEVLN*GLIPYHVRMRT Trigger: TGTCCTCATCCTCACGTGGTAAGGGATCAGGCCTCAGTTCAAGACTTCTAGAAAAGGGCATTCCGAGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | GAATGCAGTTATCCATGGGAAGAGTCCCTGTCCGCGTaGAGGCAACAATCATCTCATCTACAGTGGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ECSYPWEESLSA*RQQSSHLQWLQ Trigger: TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGATAACTGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR CCA 72 bp | GGCTCACGAGCATGCCCTTCAGGTACGCTTACCAGCTaGAGCAGTTCCAATAAAGAACAGAATGCTATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSRACPSGTLTS*SSSNKEQNAMQ Trigger: TTGCATAGCATTCTGTTCTTTATTGGAACTGCTCCAGCTGGTAAGCGTACCTGAAGGGCATGCTCGTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | AGTAAAGCACTTCTGCCAACTAGCGCTACTTGGGACTaGAAAGTGAGGATGCACAAACACTCTGTGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: SKALLPTSATWD*KVRMHKHSVDT Trigger: TGTGTCCACAGAGTGTTTGTGCATCCTCACTTTGCAGTCCCAAGTAGCGCTAGTTGGCAGAAGTGCTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | ATTGTGAGCCAAATATGTGCAGAGAAAAGAACCTGGTaGAACCTAGCAAAGGGGTTCCTTGGGCTGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: IVSQICAEKRTW*NLAKGFLGLLQ Trigger: TTGGAGCAGCCCAAGGAACCCCTTTGCTAGGTTGCACCAGGTTCTTTTCTCTGCACATATTTGGCTCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CTCAAGGATTTCCATGTCCAAGCCTGGGTAAGTGTCTaGGTCAAATTGTCCTATGGCAAAAGGTCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKDFHVQAWVSV*VKLSYGKRSAG Trigger: ACCTGCAGACCTTTTGCCATAGGACAATTTGACCCAGACACTTACCCAGGCTTGGACATGGAAATCCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | TGCTCATGTTTACACATCCAGCAGAACCTCCCACCGTaGTGTCGATGTCCCATATTCCTAGGATCCAATATG | + |
|
Preference number: 3 (lower is better) Translates to: CSCLHIQQNLPP*CRCPIFLGSNM Trigger: CATATTGGATCCTAGGAATATGGGACATCGACATCACGGTGGGAGGTTCTGCTGGATGTGTAAACATGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | GTCCCACCAAAACACACACCTTCACCTGCACTACGATaGATCCATAGGTCTATTTTTAACCACAGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPPKHTPSPALR*IHRSIFNHSSR Trigger: CCTGCTGCTGTGGTTAAAAATAGACCTATGGATTCATCGTAGTGCAGGTGAAGGTGTGTGTTTTGGTGGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | TTTACCTCCACGTTCATGACACAGCGGAGCAAATCATaGTATGGAAACAGAAGTGCTACGGTCGTCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FTSTFMTQRSKS*YGNRSATVVFL Trigger: GAGAAAGACGACCGTAGCACTTCTGTTTCCATAGCATGATTTGCTCCGCTGTGTCATGAACGTGGAGGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | GCTTTTCAAACGTACCTCTTGAGGATCCCGAAGCAATaGATGCTGGGAAGAAGGATGACACTAACATGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: AFQTYLLRIPKQ*MLGRRMTLTCS Trigger: GCTACATGTTAGTGTCATCCTTCTTCCCAGCATGCATTGCTTCGGGATCCTCAAGAGGTACGTTTGAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | CTACAAGCGAAACCATCCATCCGCATTCACTTCTCATaGTTTTCAAACGTACCTCTTGAGGATCCCGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQAKPSIRIHFS*FSNVPLEDPEA Trigger: TGCTTCGGGATCCTCAAGAGGTACGTTTGAAAAGCATGAGAAGTGAATGCGGATGGATGGTTTCGCTTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGTGTGTCAAGTTCAAATaGGAGGACAGCTTAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ESHHPHERNYEREKESVECVKFK*EDSLAS Trigger: TGAAGCTAAGCTGTCCTCCAATTTGAACTTGACACA...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR TCA 72 bp | AACACTCTGTGGACACAGCATTTACCTCCACGTTCATaGCACAGCGGAGCAAATCATGCTATGGAAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NTLWTQHLPPRS*HSGANHAMETE Trigger: TTCTGTTTCCATAGCATGATTTGCTCCGCTGTGTCATGAACGTGGAGGTAAATGCTGTGTCCACAGAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | ATGGTTTCACAGTCTGTTATCCTGCTGCTGCACACTTaGGTGTGGGAAGATAGTGGGATTTATTTGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MVSQSVILLLHT*VWEDSGIYLWA Trigger: TGCCCACAAATAAATCCCACTATCTTCCCACACTCAAGTGTGCAGCAGCAGGATAACAGACTGTGAAACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | GATACACTCAGAAGGGGAGGATATTATACAAGGTCATaGGGGGTCGTTCTTAGAATCCTGCATGTGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DTLRRGGYYTRS*GVVLRILHVTD Trigger: ATCTGTCACATGCAGGATTCTAAGAACGACCCCTCATGACCTTGTATAATATCCTCCCCTTCTGAGTGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | CCTGGTAGTTTTACAGAACAAAAACTAATACAAGTCTaGCTTGTAGAGGAGACACGGGTCCTGGCACCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSFTEQKLIQV*LVEETRVLAPN Trigger: GTTTGGTGCCAGGACCCGTGTCTCCTCTACAAGTCAGACTTGTATTAGTTTTTGTTCTGTAAAACTACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | ACACTTTTCCTATTCACTATGTGGGTGAAAGTCGGTTaGTGGCCTCCAAGGGATAATGTGGATGAACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TLFLFTMWVKVG*WPPRDNVDEHF Trigger: AAAGTGTTCATCCACATTATCCCTTGGAGGCCACCAACCGACTTTCACCCACATAGTGAATAGGAAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | CCAACCAGGGAGAAAAGAGACAGTTTGTCTAACTACTaGTTAAAGACAGAGCAAAAGGGAAGGGAGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PTREKRDSLSNY*LKTEQKGRESH Trigger: ATGAGACTCCCTTCCCTTTTGCTCTGTCTTTAATCAGTAGTTAGACAAACTGTCTCTTTTCTCCCTGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | CAACAACAACACTTTGCACATAAGCCAACTTTTCCTTaGGGGACAGCACTGTTGAGAACTGTAGTTCTCGTA | + |
|
Preference number: 3 (lower is better) Translates to: QQQHFAHKPTFP*GTALLRTVVLV Trigger: TACGAGAACTACAGTTCTCAACAGTGCTGTCCCTCAAGGAAAAGTTGGCTTATGTGCAAAGTGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | TGTTTATCTACATTTTCCCAGGCAGAACATACAAAATaGCTTCCACTCAGTTCTGTGTGTCCCATACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLSTFSQAEHTK*LPLSSVCPIHW Trigger: CCAGTGTATGGGACACACAGAACTGAGTGGAAGCCATTTTGTATGTTCTGCCTGGGAAAATGTAGATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | TTAGTACTGCATTTGACACTTTTCCTATTCACTATGTaGGTGAAAGTCGGTTGGTGGCCTCCAAGGGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLHLTLFLFTM*VKVGWWPPRDN Trigger: ATTATCCCTTGGAGGCCACCAACCGACTTTCACCCACATAGTGAATAGGAAAAGTGTCAAATGCAGTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CCA 72 bp | CATACATCATCAGAAAACAGTAATCCAGGTTTTGCTTaGTTCTCCATCTCACTCTTTCCTTGGAGTCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: HTSSENSNPGFA*FSISLFPWSLR Trigger: TCGGAGACTCCAAGGAAAGAGTGAGATGGAGAACCAAGCAAAACCTGGATTACTGTTTTCTGATGATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149791.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGGACACACCCAACAGCATTACTCAGAAAACAGTATCTGAACTCCAAAACTGTGTCAAGTTCAAATaGGAGGACAGCTTAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QQDTPNSITQKTVSELQNCVKFK*EDSLAS Trigger: TGAAGCTAAGCTGTCCTCCAATTTGAACTTGACACA...GTTTTGGAGTTCAGATACTGTTTTCTGAGTAATGCTGTTGGGTGTGTCCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTAGCCAACAACAACACTTaGCACATAAGCCAACTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MDSCSTETIMKGTVNRTLANNNT*HISQLF Trigger: GAAAAGTTGGCTTATGTGCAAAGTGTTGTTGTTGGC...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR TCA 72 bp | ATAACTGCAGTTATTGTTCAACCCATGAAGACATTGTaGGCCAAATATGTGCAGAGAAAAGAACCTGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ITAVIVQPMKTL*AKYVQRKEPGA Trigger: TGCACCAGGTTCTTTTCTCTGCACATATTTGGCTCACAATGTCTTCATGGGTTGAACAATAACTGCAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR GCA 72 bp | AGTCAGTATAATTTAGGAGCATCTAGGAGAAAAAGATaGCTACAGCCTCACCCTGGTAGTTTTACAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SQYNLGASRRKR*LQPHPGSFTEQ Trigger: TTGTTCTGTAAAACTACCAGGGTGAGGCTGTAGGCATCTTTTTCTCCTAGATGCTCCTAAATTATACTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCAAGGCTCAGGCGTGTTCCAGGCACCAGGAACTAGCTCATGGGGAAAGACACCTTCAGGGAGGTaGAGACCTCTGCAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACQGSGVFQAPGTSSWGKTPSGR*RPLQAG Trigger: ACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGT...CTTTCCCCATGAGCTAGTTCCTGGTGCCTGGAACACGCCTGAGCCTTGGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR GCA 90 bp | GACGGAGGCTACCAGCCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTGCGCTGAATGTAGTAGATaGCCTTCTCCTGAGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: DGGYQPGPPTALGLHHTCAECSR*PSPEHT Trigger: TGTATGCTCAGGAGAAGGGCATCTACTACATTCAGC...GCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGGCTGGTAGCCTCCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| 3UTR CAA 72 bp | CATCAGTCAGCCGGGCATGGTGATACACATCAGCACTaGAGAGGCAGAACCGGGAGAATCGGCCTGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQSAGHGDTHQH*RGRTGRIGLGC Trigger: GCACCCCAGGCCGATTCTCCCGGTTCTGCCTCTCAAGTGCTGATGTGTATCACCATGCCCGGCTGACTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR GCA 90 bp | CTACCAGCCGGGACCTCCCACAGCCCTAGGCCTCCACCACACCTGCTGTACACGCTGGGTGCTCTTGATTaGCGCTGTGGAACAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPAGTSHSPRPPPHLLYTLGALD*RCGTNN Trigger: GTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAG...CGTGTACAGCAGGTGTGGTGGAGGCCTAGGGCTGTGGGAGGTCCCGGCTGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCACACCTTCAGGGAGGTaGAGACCTCTGCAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAAGALLRTRVHTTHIQVTPSGR*RPLQAG Trigger: ACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGT...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAACACCTTCAGGGAGGTaGAGACCTCTGCAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EESLSAWRQQSSHLQWLQTPSGR*RPLQAG Trigger: ACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGT...TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTTCTCTGCTCCAGCTCTaGGGAACTGCTGGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSSLLQL*GTAGQW Trigger: CCATTGTCCAGCAGTTCCGCAGAGCTGGAGCAGAGA...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGATCTCTGCTCCAGCTCTaGGGAACTGCTGGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPRGGNNHLIYSGFKRSLLQL*GTAGQW Trigger: CCATTGTCCAGCAGTTCCGCAGAGCTGGAGCAGAGA...TCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTACACCTTCAGGGAGGTaGAGACCTCTGCAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRESHHPHERNYEREKESTPSGR*RPLQAG Trigger: ACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGT...AGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTCAAATGAATGCAGTTATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGTCTCTGCTCCAGCTCTaGGGAACTGCTGGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LASNECSYPWEESLSAWRSLLQL*GTAGQW Trigger: CCATTGTCCAGCAGTTCCGCAGAGCTGGAGCAGAGA...CCTCCACGCGGACAGGGACTCTTCCCATGGATAACTGCATTCATTTGAAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | GATGGAAGACAGGAGAGCTGGCCTCCAGAGCCTGGAGTGTATTGGAGAACACACCCAGCAGCCAGTCAATaGGCTTCTCCTTATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: DGRQESWPPEPGVYWRTHPAASQ*ASPYRT Trigger: TGTTCTATAAGGAGAAGCCCATTGACTGGCTGCTGG...GTGTGTTCTCCAATACACTCCAGGCTCTGGAGGCCAGCTCTCCTGTCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGAATCTGTACGGCGGGCTaGAGGCTTCTTTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPCPRGGNNHLIYSGFKRICTAG*RLLSFC Trigger: GCAAAATGAAAGAAGCCTTCAGCCCGCCGTACAGAT...TCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTCAAATGAATGCAGTTATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGGCTCTGCGGAACTGCTaGACAATGGTGTTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASNECSYPWEESLSAWRALRNC*TMVFSS Trigger: GGAGCTAAACACCATTGTCCAGCAGTTCCGCAGAGC...CCTCCACGCGGACAGGGACTCTTCCCATGGATAACTGCATTCATTTGAAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTTTCACCCAGAGAATGTaGTCCAGCAGCCAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSFTQRM*SSSQSM Trigger: CATTGACTGGCTGCTGGACCACATTCTCTGGGTGAA...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR TCA 90 bp | GAGACACGGCAGGGGCTTCCCACCTGGACAATGACAGTCACACTGGTTTTCTGTTGTAATCTTTATCCGTaGGTTTCTGAATCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETRQGLPTWTMTVTLVFCCNLYP*VSESSP Trigger: CGGGGAAGATTCAGAAACTCACGGATAAAGATTACA...ACAGAAAACCAGTGTGACTGTCATTGTCCAGGTGGGAAGCCCCTGCCGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTCATCTTTTTCGGGGTTaGAGACCTTCACCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSHLFRG*RPSPRE Trigger: TTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATG...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR CAA 72 bp | CTCTTTCCTTGGAGTCTCCGAACGTCTCCTTCAGGTTaGTCAAGTCGGGGTAATAGCTTTCAGGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPWSLRTSPSG*SSRGNSFQEER Trigger: TCTCTCCTCCTGAAAGCTATTACCCCGACTTGACAAACCTGAAGGAGACGTTCGGAGACTCCAAGGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149791.8 |
||
| CDS-3UTR TCA 90 bp | GAGACACGGCAGGGGCTTCCCACCTGGACAATGACAGTCACACTGGTTTTCTGTAATTCCCATAACTATTaGAACTCCCGTTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETRQGLPTWTMTVTLVFCNSHNY*NSRSST Trigger: AGTGGAAGAACGGGAGTTTCAATAGTTATGGGAATT...ACAGAAAACCAGTGTGACTGTCATTGTCCAGGTGGGAAGCCCCTGCCGTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGCTGAATGTAGTAGATaGCCTTCTCCTGAGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: EESLSAWRQQSSHLQWLQAECSR*PSPEHT Trigger: TGTATGCTCAGGAGAAGGGCATCTACTACATTCAGC...TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTCAAATGAATGCAGTTATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCATCTTTTTCGGGGTTaGAGACCTTCACCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LASNECSYPWEESLSAWRHLFRG*RPSPRE Trigger: TTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATG...CCTCCACGCGGACAGGGACTCTTCCCATGGATAACTGCATTCATTTGAAGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | GATAGAGTACAGGGGCACGGGCAGCAAATCCTTGAGGTGTCTTTGTTTGTTTTAGCTCTGCGGAACTGCTaGACAATGGTGTTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRVQGHGQQILEVSLFVLALRNC*TMVFSS Trigger: GGAGCTAAACACCATTGTCCAGCAGTTCCGCAGAGC...TAAAACAAACAAAGACACCTCAAGGATTTGCTGCCCGTGCCCCTGTACTCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR CCA 90 bp | TCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCCCAGCAGCCAGTCAATaGGCTTCTCCTTATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: STVASREVVFKSKQKRTRPAASQ*ASPYRT Trigger: TGTTCTATAAGGAGAAGCCCATTGACTGGCTGCTGG...GCGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGTTCACCCAGAGAATGTaGTCCAGCAGCCAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ESHHPHERNYEREKESVEFTQRM*SSSQSM Trigger: CATTGACTGGCTGCTGGACCACATTCTCTGGGTGAA...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTTTCACCCAGAGAATGTaGTCCAGCAGCCAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRESHHPHERNYEREKESFTQRM*SSSQSM Trigger: CATTGACTGGCTGCTGGACCACATTCTCTGGGTGAA...AGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTCCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| 3UTR CAA 72 bp | GGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTaGACTGTCCCACCAAAACACACACCTTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRMTLTCSRVI*TVPPKHTPSPA Trigger: TGCAGGTGAAGGTGTGTGTTTTGGTGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGATGTAATCTTTATCCGTaGGTTTCTGAATCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPRGGNNHLIYSGFKRCNLYP*VSESSP Trigger: CGGGGAAGATTCAGAAACTCACGGATAAAGATTACA...TCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCACATCTTTTTCGGGGTTaGAGACCTTCACCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLGRRMTLTCSRVILTVPHLFRG*RPSPRE Trigger: TTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATG...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCACTGGGTGCTCTTGATTaGCGCTGTGGAACAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLGRRMTLTCSRVILTVPLGALD*RCGTNN Trigger: GTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAG...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR GCA 90 bp | ATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCTGGGTGCTCTTGATTaGCGCTGTGGAACAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYSGFKRGSVQVQTEEDALGALD*RCGTNN Trigger: GTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAG...CGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGGGAAGAAGGATGACACTAACATGTAGCCGGGTAATCTTGACTGTCCCACCAGCAGCCAGTCAATaGGCTTCTCCTTATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MLGRRMTLTCSRVILTVPPAASQ*ASPYRT Trigger: TGTTCTATAAGGAGAAGCCCATTGACTGGCTGCTGG...TGGGACAGTCAAGATTACCCGGCTACATGTTAGTGTCATCCTTCTTCCCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CCA 90 bp | CTGGACAATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACATTCACCCAGAGAATGTaGTCCAGCAGCCAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LDNDSHTGFLWLHTIHSTFTQRM*SSSQSM Trigger: CATTGACTGGCTGCTGGACCACATTCTCTGGGTGAA...TGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATTGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR TCA 90 bp | ATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGAATGGCCCAAACAGCTaGGTTCTGAATAACGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYSGFKRGSVQVQTEEDANGPNS*VLNNGK Trigger: CTTTCCGTTATTCAGAACTCAGCTGTTTGGGCCATT...CGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGAATGGCCCAAACAGCTaGGTTCTGAATAACGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESHHPHERNYEREKESVENGPNS*VLNNGK Trigger: CTTTCCGTTATTCAGAACTCAGCTGTTTGGGCCATT...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGATCCACAATTCCCTCTaGAACACCATACTCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ESLSAWRQQSSHLQWLQEIHNSL*NTILKF Trigger: AAATTTGAGTATGGTGTTGCAGAGGGAATTGTGGAT...CTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAAATCCAGGTTTTGCTTaGTTCTCCATCTCACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EESLSAWRQQSSHLQWLQNPGFA*FSISLF Trigger: AAAGAGTGAGATGGAGAACCAAGCAAAACCTGGATT...TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | CTGGACAATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACACCAGCAGCCAGTCAATaGGCTTCTCCTTATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LDNDSHTGFLWLHTIHSTPAASQ*ASPYRT Trigger: TGTTCTATAAGGAGAAGCCCATTGACTGGCTGCTGG...TGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATTGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| 3UTR CAA 72 bp | CAGTGTCCTTGTTTTTGTAACTTCACCATGTGGTTCTaGAGCATGGACTCTGTAGATGACAGCCTCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCPCFCNFTMWF*SMDSVDDSLTL Trigger: CAGCGTGAGGCTGTCATCTACAGAGTCCATGCTCAAGAACCACATGGTGAAGTTACAAAAACAAGGACACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | ATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGTGTAATCTTTATCCGTaGGTTTCTGAATCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IYSGFKRGSVQVQTEEDACNLYP*VSESSP Trigger: CGGGGAAGATTCAGAAACTCACGGATAAAGATTACA...CGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCCATCTTTTTCGGGGTTaGAGACCTTCACCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCHLFRG*RPSPRE Trigger: TTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATG...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR GCA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTATCCACAATTCCCTCTaGAACACCATACTCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSIHNSL*NTILKF Trigger: AAATTTGAGTATGGTGTTGCAGAGGGAATTGTGGAT...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | TCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCAATCCAGGTTTTGCTTaGTTCTCCATCTCACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STVASREVVFKSKQKRTRNPGFA*FSISLF Trigger: AAAGAGTGAGATGGAGAACCAAGCAAAACCTGGATT...GCGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR GCA 90 bp | ATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGCTGGGTGCTCTTGATTaGCGCTGTGGAACAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVASREVVFKSKQKLGALD*RCGTNN Trigger: GTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAG...CTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGATGAGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| 3UTR CAA 72 bp | CATCCTCATCAACCTCCAGGGCTCCCACAAAATCTATaGGAAACATCTGTTTCCAATAGTCTAGTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HPHQPPGLPQNL*ETSVSNSLVLN Trigger: GTTCAGCACTAGACTATTGGAAACAGATGTTTCCAATAGATTTTGTGGGAGCCCTGGAGGTTGATGAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCTGCCAACTCAACTTTTCATTTCAACAGATGTGTTTTGTGGCTTCTGTAATCTGTACGGCGGGCTaGAGGCTTCTTTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGCQLNFSFQQMCFVASVICTAG*RLLSFC Trigger: GCAAAATGAAAGAAGCCTTCAGCCCGCCGTACAGAT...TACAGAAGCCACAAAACACATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | CAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATATAACCAATGGCCCAAACAGCTaGGTTCTGAATAACGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSHWFSVATHHTQYSNITNGPNS*VLNNGK Trigger: CTTTCCGTTATTCAGAACTCAGCTGTTTGGGCCATT...GGTTATATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCATAGGAAAAGTGCCAAATGCAGTACTAATTATTAAAAAGCTGAAGGAAATCTGTACGGCGGGCTaGAGGCTTCTTTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIGKVPNAVLIIKKLKEICTAG*RLLSFC Trigger: GCAAAATGAAAGAAGCCTTCAGCCCGCCGTACAGAT...TTCCTTCAGCTTTTTAATAATTAGTACTGCATTTGGCACTTTTCCTATGCCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
||
| CDS-3UTR TCA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATAAATGGCCCAAACAGCTaGGTTCTGAATAACGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDSHTGFLWLHTIHSTVINGPNS*VLNNGK Trigger: CTTTCCGTTATTCAGAACTCAGCTGTTTGGGCCATT...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | AATACCAAAATAGTCTCAGTCATGTTAACAGGCTGTCAGGATTGTAAAACGTTTGCTCTGCGGAACTGCTaGACAATGGTGTTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTKIVSVMLTGCQDCKTFALRNC*TMVFSS Trigger: GGAGCTAAACACCATTGTCCAGCAGTTCCGCAGAGC...AAACGTTTTACAATCCTGACAGCCTGTTAACATGACTGAGACTATTTTGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | ATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGATTCTTTCTCCAGGTTaGCAACAACGCTGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVASREVVFKSKQKILSPG*QQRCEH Trigger: ATGTTCACAGCGTTGTTGCCAACCTGGAGAAAGAAT...CTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGATGAGATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| 3UTR CAA 72 bp | GGGAAACTTAACACCAAGAAAAGCTTCAGCTGGGCTTaGACATGCACAGTAGTGTTTATCTACATTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLNTKKSFSWA*TCTVVFIYIFP Trigger: TGGGAAAATGTAGATAAACACTACTGTGCATGTCAAAGCCCAGCTGAAGCTTTTCTTGGTGTTAAGTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | ATGGACAGTTGTAGCACAGAGACAATTATGAAAGGCACAGTCAACAGGACATTACAAACAGCTGAGTTCTaGATAACGGAAAGTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MDSCSTETIMKGTVNRTLQTAEF*ITESRK Trigger: CTTTCGACTTTCCGTTATTCAGAACTCAGCTGTTTG...TAATGTCCTGTTGACTGTGCCTTTCATAATTGTCTCTGTGCTACAACTGTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATACAAACAGCTGAGTTCTaGATAACGGAAAGTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDSHTGFLWLHTIHSTVIQTAEF*ITESRK Trigger: CTTTCGACTTTCCGTTATTCAGAACTCAGCTGTTTG...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTTCCAATAAAGAACAGAATGCTATGCAAGCTAAAGGACCCCACTCTTGCATCCACAATTCCCTCTaGAACACCATACTCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSNKEQNAMQAKGPHSCIHNSL*NTILKF Trigger: AAATTTGAGTATGGTGTTGCAGAGGGAATTGTGGAT...GCAAGAGTGGGGTCCTTTAGCTTGCATAGCATTCTGTTCTTTATTGGAACTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | CCAATGATTTCAAGAACCTTTGTTCAAACACACTCTGATGGACATAACACACGTTGTAATCTTTATCCGTaGGTTTCTGAATCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PMISRTFVQTHSDGHNTRCNLYP*VSESSP Trigger: CGGGGAAGATTCAGAAACTCACGGATAAAGATTACA...ACGTGTGTTATGTCCATCAGAGTGTGTTTGAACAAAGGTTCTTGAAATCATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCTGCCAACTCAACTTTTCATTTCAACAGATGTGTTTTGTGGCTTCTGTACAAACAGCTGAGTTCTaGATAACGGAAAGTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGCQLNFSFQQMCFVASVQTAEF*ITESRK Trigger: CTTTCGACTTTCCGTTATTCAGAACTCAGCTGTTTG...TACAGAAGCCACAAAACACATCTGTTGAAATGAAAAGTTGAGTTGGCAGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | CCAATGATTTCAAGAACCTTTGTTCAAACACACTCTGATGGACATAACACACGTAATTCCCATAACTATTaGAACTCCCGTTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PMISRTFVQTHSDGHNTRNSHNY*NSRSST Trigger: AGTGGAAGAACGGGAGTTTCAATAGTTATGGGAATT...ACGTGTGTTATGTCCATCAGAGTGTGTTTGAACAAAGGTTCTTGAAATCATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR GCA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATAATCCACAATTCCCTCTaGAACACCATACTCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NDSHTGFLWLHTIHSTVIIHNSL*NTILKF Trigger: AAATTTGAGTATGGTGTTGCAGAGGGAATTGTGGAT...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCATAGGAAAAGTGCCAAATGCAGTACTAATTATTAAAAAGCTGAAGGAAATTCTTTCTCCAGGTTaGCAACAACGCTGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGIGKVPNAVLIIKKLKEILSPG*QQRCEH Trigger: ATGTTCACAGCGTTGTTGCCAACCTGGAGAAAGAAT...TTCCTTCAGCTTTTTAATAATTAGTACTGCATTTGGCACTTTTCCTATGCCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR TCA 90 bp | AATACCAAAATAGTCTCAGTCATGTTAACAGGCTGTCAGGATTGTAAAACGTTTCAAACAGCTGAGTTCTaGATAACGGAAAGTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTKIVSVMLTGCQDCKTFQTAEF*ITESRK Trigger: CTTTCGACTTTCCGTTATTCAGAACTCAGCTGTTTG...AAACGTTTTACAATCCTGACAGCCTGTTAACATGACTGAGACTATTTTGGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CCA 90 bp | AATACCAAAATAGTCTCAGTCATGTTAACAGGCTGTCAGGATTGTAAAACGTTTAATCCAGGTTTTGCTTaGTTCTCCATCTCACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTKIVSVMLTGCQDCKTFNPGFA*FSISLF Trigger: AAAGAGTGAGATGGAGAACCAAGCAAAACCTGGATT...AAACGTTTTACAATCCTGACAGCCTGTTAACATGACTGAGACTATTTTGGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS GCA 90 bp | CTCCAGGGTGTGCCCTTGGTACACCTTCAGGGAGGTGGAGACCTCTaGAGGCGGGTTCACGTGGACCTTGAGAAGCAATGGCTTCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LQGVPLVHLQGGGDL*RRVHVDLEKQWLHV Trigger: TACATGAAGCCATTGCTTCTCAAGGTCCACGTGAACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGTACCAAGGGCACACCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RAAGALLRTRVHTTHIQVVSWVL*IAAVEQ Trigger: TTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGAC...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGCATCTCACTCTTTCCTaGGAGTCTCCGAACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLSAWRQQSSHLQWLQEHLTLS*ESPNVS Trigger: GGAGACGTTCGGAGACTCCAAGGAAAGAGTGAGATG...CTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGGCATCTTTTTCGGGGTaGCAGACCTTCACCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLSAWRQQSSHLQWLQEASFSG*QTFTQR Trigger: TCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGC...CTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSVSWVL*IAAVEQ Trigger: TTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGAC...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS TCA 90 bp | ACTCCACGACCAGCGCCAGGTCCGGCGCCTGGAACATTTTTCCAATaGAGCCAAGCTGGGAAAACTCTAGAATCATCCATTCTTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPRPAPGPAPGTFFQ*SQAGKTLESSILPK Trigger: CTTCGGAAGAATGGATGATTCTAGAGTTTTCCCAGCTTGGCTTCATTGGAAAAATGTTCCAGGCGCCGGACCTGGCGCTGGTCGTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CCA 90 bp | GGTGGAGACCTCTGCAGGCGGGTTCACGTGGACCTTGAGAAGCAATaGCTTCATGTAATCTTTATCCGTGAGTTTCTGAATCTTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GGDLCRRVHVDLEKQ*LHVIFIREFLNLPR Trigger: TCGGGGAAGATTCAGAAACTCACGGATAAAGATTACATGAAGCCATTGCTTCTCAAGGTCCACGTGAACCCGCCTGCAGAGGTCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CCA 90 bp | CTTAAGAGGGAGAACATCCACGGTCGTGTTCAGCAGGATGTCTCCTaGGTGCTCTTGATTGCCGCTGTGGAACAAATAACTCTCCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: LKRENIHGRVQQDVS*VLLIAAVEQITLHV Trigger: AACGTGGAGAGTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGACATCCTGCTGAACACGACCGTGGATGTTCTCCCTCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCCATCTCACTCTTTCCTaGGAGTCTCCGAACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STVASREVVFKSKQKRTRHLTLS*ESPNVS Trigger: GGAGACGTTCGGAGACTCCAAGGAAAGAGTGAGATG...GCGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCGCATCTTTTTCGGGGTaGCAGACCTTCACCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STVASREVVFKSKQKRTRASFSG*QTFTQR Trigger: TCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGC...GCGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCTTTTTCTTTCCCATTTaGCCACGTGGTATACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RAAGALLRTRVHTTHIQVFFFPI*PRGIPG Trigger: TCCTGGTATACCACGTGGCAAAATGGGAAAGAAAAA...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | GGAAGGGAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTCATCTCACTCTTTCCTaGGAGTCTCCGAACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GRESHHPHERNYEREKESHLTLS*ESPNVS Trigger: GGAGACGTTCGGAGACTCCAAGGAAAGAGTGAGATG...AGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GATAGAGTACAGGGGCACGGGCAGCAAATCCTTGAGGTGTCTTTGTTTGTTTTAGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: DRVQGHGQQILEVSLFVLVSWVL*IAAVEQ Trigger: TTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGAC...TAAAACAAACAAAGACACCTCAAGGATTTGCTGCCCGTGCCCCTGTACTCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAGCAGGAGCCCTGCTAAGGACCAGGGTTCACACTACACACATTCAGGTCTCCACGTTGACCGGTTaGTCAAATTTAAACAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RAAGALLRTRVHTTHIQVSTLTG*SNLNKM Trigger: CATCTTGTTTAAATTTGACAAACCGGTCAACGTGGA...GACCTGAATGTGTGTAGTGTGAACCCTGGTCCTTAGCAGGGCTCCTGCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | GTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGTTTTTCTTTCCCATTTaGCCACGTGGTATACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VRVEATIISSTVASREVVFFFPI*PRGIPG Trigger: TCCTGGTATACCACGTGGCAAAATGGGAAAGAAAAA...CACTACCTCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAATTTTTCTTTCCCATTTaGCCACGTGGTATACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: EESLSAWRQQSSHLQWLQFFFPI*PRGIPG Trigger: TCCTGGTATACCACGTGGCAAAATGGGAAAGAAAAA...TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAATCCACGTTGACCGGTTaGTCAAATTTAAACAAGATG | + |
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Preference number: 5 (lower is better) Translates to: EESLSAWRQQSSHLQWLQSTLTG*SNLNKM Trigger: CATCTTGTTTAAATTTGACAAACCGGTCAACGTGGA...TTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGATCCACGTTGACCGGTTaGTCAAATTTAAACAAGATG | + |
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Preference number: 5 (lower is better) Translates to: SPCPRGGNNHLIYSGFKRSTLTG*SNLNKM Trigger: CATCTTGTTTAAATTTGACAAACCGGTCAACGTGGA...TCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | ATCCATGGGAAGAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTTCCACGTTGACCGGTTaGTCAAATTTAAACAAGATG | + |
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Preference number: 5 (lower is better) Translates to: IHGKSPCPRGGNNHLIYSSTLTG*SNLNKM Trigger: CATCTTGTTTAAATTTGACAAACCGGTCAACGTGGA...ACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTCTTCCCATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATAGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: NDSHTGFLWLHTIHSTVIVSWVL*IAAVEQ Trigger: TTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGAC...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGTCTAATCGTTTGTCTTaGGTTTCTTTGCTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: ESLSAWRQQSSHLQWLQESNRLS*VSLLIS Trigger: GGAAATCAGCAAAGAAACCAAAGACAAACGATTAGA...CTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGCCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VRVEATIISSTVASREVVPSSNR*SLVSLL Trigger: CAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...CACTACCTCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AGTCCCTGTCCGCGTGGAGGCAACAATCATCTCATCTACAGTGGCTTCAAGAGACCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPCPRGGNNHLIYSGFKRPSSNR*SLVSLL Trigger: CAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...TCTCTTGAAGCCACTGTAGATGAGATGATTGTTGCCTCCACGCGGACAGGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | ATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGACGTCTCCTTCAGGTTaGTCAAGTCGGGGTAATAGC | + |
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Preference number: 5 (lower is better) Translates to: IISSTVASREVVFKSKQKTSPSG*SSRGNS Trigger: GCTATTACCCCGACTTGACAAACCTGAAGGAGACGT...CTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGATGAGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATACATCTCACTCTTTCCTaGGAGTCTCCGAACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: NDSHTGFLWLHTIHSTVIHLTLS*ESPNVS Trigger: GGAGACGTTCGGAGACTCCAAGGAAAGAGTGAGATG...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | AATGACAGTCACACTGGTTTTCTGTGGCTACACACCATACACAGTACAGTAATAGCATCTTTTTCGGGGTaGCAGACCTTCACCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: NDSHTGFLWLHTIHSTVIASFSG*QTFTQR Trigger: TCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGC...TATTACTGTACTGTGTATGGTGTGTAGCCACAGAAAACCAGTGTGACTGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | TCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGAGGACGCGCTCTAATCGTTTGTCTTaGGTTTCTTTGCTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: STVASREVVFKSKQKRTRSNRLS*VSLLIS Trigger: GGAAATCAGCAAAGAAACCAAAGACAAACGATTAGA...GCGCGTCCTCTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCATCACCCACATGAAAGGAACTATGAACGGGAAAAGGAGTCTGTGGAGCCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ESHHPHERNYEREKESVEPSSNR*SLVSLL Trigger: CAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...CTCCACAGACTCCTTTTCCCGTTCATAGTTCCTTTCATGTGGGTGATGAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCATAGGAAAAGTGCCAAATGCAGTACTAATTATTAAAAAGCTGAAGGAAGCATCTTTTTCGGGGTaGCAGACCTTCACCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QGIGKVPNAVLIIKKLKEASFSG*QTFTQR Trigger: TCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGC...TTCCTTCAGCTTTTTAATAATTAGTACTGCATTTGGCACTTTTCCTATGCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | AATACCAAAATAGTCTCAGTCATGTTAACAGGCTGTCAGGATTGTAAAACGTTTACGTCTCCTTCAGGTTaGTCAAGTCGGGGTAATAGC | + |
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Preference number: 5 (lower is better) Translates to: NTKIVSVMLTGCQDCKTFTSPSG*SSRGNS Trigger: GCTATTACCCCGACTTGACAAACCTGAAGGAGACGT...AAACGTTTTACAATCCTGACAGCCTGTTAACATGACTGAGACTATTTTGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | ATCATCTCATCTACAGTGGCTTCAAGAGAGGTAGTGTTCAAGTCCAAACAGAAGTCTAATCGTTTGTCTTaGGTTTCTTTGCTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: IISSTVASREVVFKSKQKSNRLS*VSLLIS Trigger: GGAAATCAGCAAAGAAACCAAAGACAAACGATTAGA...CTTCTGTTTGGACTTGAACACTACCTCTCTTGAAGCCACTGTAGATGAGATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCATAGGAAAAGTGCCAAATGCAGTACTAATTATTAAAAAGCTGAAGGAACCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGIGKVPNAVLIIKKLKEPSSNR*SLVSLL Trigger: CAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...TTCCTTCAGCTTTTTAATAATTAGTACTGCATTTGGCACTTTTCCTATGCCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042161.15 ENSMUST00000151952.8 |
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| CDS-3UTR CAA 90 bp | AATACCAAAATAGTCTCAGTCATGTTAACAGGCTGTCAGGATTGTAAAACGTTTTCTAATCGTTTGTCTTaGGTTTCTTTGCTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: NTKIVSVMLTGCQDCKTFSNRLS*VSLLIS Trigger: GGAAATCAGCAAAGAAACCAAAGACAAACGATTAGA...AAACGTTTTACAATCCTGACAGCCTGTTAACATGACTGAGACTATTTTGGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS GCA 72 bp | GTGCCCTTGGTACACCTTCAGGGAGGTGGAGACCTCTaGAGGCGGGTTCACGTGGACCTTGAGAAGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VPLVHLQGGGDL*RRVHVDLEKQW Trigger: CCATTGCTTCTCAAGGTCCACGTGAACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGTACCAAGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 72 bp | GTCTTCCCCCATGTAGGTCTTCTCCAGGGTGTGCCCTaGGTACACCTTCAGGGAGGTGGAGACCTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VFPHVGLLQGVP*VHLQGGGDLCR Trigger: CCTGCAGAGGTCTCCACCTCCCTGAAGGTGTACCAAGGGCACACCCTGGAGAAGACCTACATGGGGGAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 90 bp | CCAAAAGAAGTCTTCCCCCATGTAGGTCTTCTCCAGGGTGTGCCCTaGGTACACCTTCAGGGAGGTGGAGACCTCTGCAGGCGGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PKEVFPHVGLLQGVP*VHLQGGGDLCRRVH Trigger: GTGAACCCGCCTGCAGAGGTCTCCACCTCCCTGAAGGTGTACCAAGGGCACACCCTGGAGAAGACCTACATGGGGGAAGACTTCTTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CCA 72 bp | AGGATGAACTCCACGACCAGCGCCAGGTCCGGCGCCTaGAACATTTTTCCAATGAAGCCAAGCTGGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RMNSTTSARSGA*NIFPMKPSWEN Trigger: GTTTTCCCAGCTTGGCTTCATTGGAAAAATGTTCCAGGCGCCGGACCTGGCGCTGGTCGTGGAGTTCATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 72 bp | CACGGTCGTGTTCAGCAGGATGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAAATAACTCTCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: HGRVQQDVSWVL*IAAVEQITLHV Trigger: AACGTGGAGAGTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGACATCCTGCTGAACACGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 90 bp | GAGAACATCCACGGTCGTGTTCAGCAGGATGTCTCCTGGGTGCTCTaGATTGCCGCTGTGGAACAAATAACTCTCCACGTTGACCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ENIHGRVQQDVSWVL*IAAVEQITLHVDRF Trigger: AAACCGGTCAACGTGGAGAGTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGACATCCTGCTGAACACGACCGTGGATGTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 90 bp | AGGTTTGCCTTCTGTCTGTCGCAGTGTTTAGCATCTTTTTCGGGGTaGCAGACCTTCACCCAGAGAATGTGGTCCAGCAGCCAGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: RFAFCLSQCLASFSG*QTFTQRMWSSSQSM Trigger: CATTGACTGGCTGCTGGACCACATTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGCTAAACACTGCGACAGACAGAAGGCAAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CCA 72 bp | GAGAACATCCACGGTCGTGTTCAGCAGGATGTCTCCTaGGTGCTCTTGATTGCCGCTGTGGAACAAATAACT | + |
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Preference number: 6 (lower is better) Translates to: ENIHGRVQQDVS*VLLIAAVEQIT Trigger: AGTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGAGACATCCTGCTGAACACGACCGTGGATGTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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| CDS CAA 90 bp | TCCATCTCACTCTTTCCTTGGAGTCTCCGAACGTCTCCTTCAGGTTaGTCAAGTCGGGGTAATAGCTTTCAGGAGGAGAGATTATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SISLFPWSLRTSPSG*SSRGNSFQEERLFP Trigger: TGGAAATAATCTCTCCTCCTGAAAGCTATTACCCCGACTTGACAAACCTGAAGGAGACGTTCGGAGACTCCAAGGAAAGAGTGAGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042161.15 ENSMUST00000143636.8 ENSMUST00000148047.2 ENSMUST00000151952.8 ENSMUST00000154819.8 |
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