RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042428

Ensembl transcript IDs: ENSMUST00000044970.7

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGGAGAGAGCCCTGGCTCAGATGGACCCATCAGTCCCTGGGATaGCCTGACTTCTGTGGCCACCTCTCAATCCCTAGAGGAACTAGA +
Preference number: 1 (lower is better)
Translates to: LRREPWLRWTHQSLG*PDFCGHLSIPRGTR
Trigger: TCTAGTTCCTCTAGGGATTGAGAGGTGGCCACAGAAGTCAGGGCATCCCAGGGACTGATGGGTCCATCTGAGCCAGGGCTCTCTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp CTTAATGTTCTTTCTTGGACCCAGGAGAACCTTGTGGTCCCTTCCTaGCCCCTAGCCTGCTCTTACGGGTGTGGGGGTGGAGGCGTAGTG +
Preference number: 1 (lower is better)
Translates to: LNVLSWTQENLVVPS*PLACSYGCGGGGVV
Trigger: CACTACGCCTCCACCCCCACACCCGTAAGAGCAGGCTAGGGGCCAGGAAGGGACCACAAGGTTCTCCTGGGTCCAAGAAAGAACATTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp GACATCTCAGGAGAGAGCCCTGGCTCAGATGGACCCATCAGTCCCTaGGATGCCCTGACTTCTGTGGCCACCTCTCAATCCCTAGAGGAA +
Preference number: 1 (lower is better)
Translates to: DISGESPGSDGPISP*DALTSVATSQSLEE
Trigger: TTCCTCTAGGGATTGAGAGGTGGCCACAGAAGTCAGGGCATCCCAGGGACTGATGGGTCCATCTGAGCCAGGGCTCTCTCCTGAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 90 bp ATCCTCTCAGCCATGCGGGACCTCATCCCTTGGGTCCCGCATGTCTaGGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGC +
Preference number: 1 (lower is better)
Translates to: ILSAMRDLIPWVPHV*GSYKVCSLQGTFQC
Trigger: GCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACATGCGGGACCCAAGGGATGAGGTCCCGCATGGCTGAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 90 bp GGGTCCTTCTCCCTCCCTGAATTGGTCACTTGTGGGCAGGAGCCCTaGAATGCCTGGAACAGGATATCAATGAAGCAGCTGAGGGTACCA +
Preference number: 1 (lower is better)
Translates to: GSFSLPELVTCGQEP*NAWNRISMKQLRVP
Trigger: TGGTACCCTCAGCTGCTTCATTGATATCCTGTTCCAGGCATTTCAGGGCTCCTGCCCACAAGTGACCAATTCAGGGAGGGAGAAGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 90 bp CCACCTCTTGAGGGTGGTCTCTCAGCCCATGGCCAGGCCTCTTCCTaGCTAATTGAAACTATTGTACTATCTGAGAAGGAAGGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: PPLEGGLSAHGQASS*LIETIVLSEKEGQP
Trigger: GGGCTGGCCTTCCTTCTCAGATAGTACAATAGTTTCAATTAGGCAGGAAGAGGCCTGGCCATGGGCTGAGAGACCACCCTCAAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 90 bp GTGGCCACCTCTCAATCCCTAGAGGAACTAGAGAGGAAGGCTCTTTaGAGGAGAGGTTCCATGGAGGGTGTTCCTCAATGGGAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: VATSQSLEELERKAL*RRGSMEGVPQWEER
Trigger: TCTCTCCTCCCATTGAGGAACACCCTCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCTAGTTCCTCTAGGGATTGAGAGGTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 90 bp AGGGTATATTTGGGACCAGAGGAAGATTCCGCATCACCCCCGGCATaGCTTCTTACAGAGGCAATGGGACTGACTAACGAGCTTCATCCT +
Preference number: 1 (lower is better)
Translates to: RVYLGPEEDSASPPA*LLTEAMGLTNELHP
Trigger: AGGATGAAGCTCGTTAGTCAGTCCCATTGCCTCTGTAAGAAGGCATGCCGGGGGTGATGCGGAATCTTCCTCTGGTCCCAAATATACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp AGAGAGGCCTCTGTCAGTCTCCTTCTCTTGTCTCGCCTACTATACTaGCTGTCCTTATGGTCTCCAGCTCCTGTCCCACCCCAAAAACTA +
Preference number: 1 (lower is better)
Translates to: REASVSLLLLSRLLY*LSLWSPAPVPPQKL
Trigger: TAGTTTTTGGGGTGGGACAGGAGCTGGAGACCATAAGGACAGCCAGTATAGTAGGCGAGACAAGAGAAGGAGACTGACAGAGGCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp CACCACCTTATGCCCTCCAGGAACACCTCTTTCCCACAGCACTCTTaGGAACAAAAATGCTGCATAGATGTCCGGGCTTGCTCTTCTCTA +
Preference number: 1 (lower is better)
Translates to: HHLMPSRNTSFPQHS*EQKCCIDVRACSSL
Trigger: TAGAGAAGAGCAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTGTTCCTGGAGGGCATAAGGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 90 bp TCACAGGGAAGAGTTCACACTTTCTCCTCTTATCATGTGAGCAGGTaGAGCCCCTCTATCCAGACCTGGGAGTTGTATGTGAAGCTAAGC +
Preference number: 1 (lower is better)
Translates to: SQGRVHTFSSYHVSR*SPSIQTWELYVKLS
Trigger: GCTTAGCTTCACATACAACTCCCAGGTCTGGATAGAGGGGCTGCACCTGCTCACATGATAAGAGGAGAAAGTGTGAACTCTTCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp ATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGTCAACGGTaGGGCTTCTCTTTAACTAGACTGAAGTTCCATAGCACTCCCAGT +
Preference number: 1 (lower is better)
Translates to: IPPCPVMDNSPRCQR*GFSLTRLKFHSTPS
Trigger: ACTGGGAGTGCTATGGAACTTCAGTCTAGTTAAAGAGAAGCCCCACCGTTGACACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp GCTCCTGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTaGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: APGPKCIYLQDSGNP*HGIPPCPVMDNSPR
Trigger: CCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp AAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCCTAGCTTCTTaGCCCACATCAAGAGCAAATACAGTTTCTAGTCCCTCCCTACTG +
Preference number: 1 (lower is better)
Translates to: KCVLSRVPSNASLAS*PTSRANTVSSPSLL
Trigger: CAGTAGGGAGGGACTAGAAACTGTATTTGCTCTTGATGTGGGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTGGAGAGAACACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp CAAGACAGCAACAGGAAAAGTGAGAACAGCTATCAAGGGTATATTTaGGACCAGAGGAAGATTCCGCATCACCCCCGGCATGCCTTCTTA +
Preference number: 1 (lower is better)
Translates to: QDSNRKSENSYQGYI*DQRKIPHHPRHAFL
Trigger: TAAGAAGGCATGCCGGGGGTGATGCGGAATCTTCCTCTGGTCCCAAATATACCCTTGATAGCTGTTCTCACTTTTCCTGTTGCTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 90 bp GTTTCTAGTCCCTCCCTACTGTCTCTTCTTGCTCCTGGACCCAAATaGATTTATTTACAAGATTCTGGGAACCCCTGGCATGGTATACCT +
Preference number: 1 (lower is better)
Translates to: VSSPSLLSLLAPGPK*IYLQDSGNPWHGIP
Trigger: AGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGAAGAGACAGTAGGGAGGGACTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp TGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTGGCATaGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGTCA +
Preference number: 1 (lower is better)
Translates to: WTQMHLFTRFWEPLA*YTSLSCNGQQSQVS
Trigger: TGACACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp GTCTCTTCTTGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTaGGAACCCCTGGCATGGTATACCTCCTTGTCCTGTAATGGACAA +
Preference number: 1 (lower is better)
Translates to: VSSCSWTQMHLFTRF*EPLAWYTSLSCNGQ
Trigger: TTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGAAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp AGGGTGCTGCTAGTAATACAGAACTCTCAAATGGAGGCAGGCATATaGCAGTCCTGCTCAAAACTACATTTCCCAGTTTTCCTTGCAACT +
Preference number: 1 (lower is better)
Translates to: RVLLVIQNSQMEAGI*QSCSKLHFPVFLAT
Trigger: AGTTGCAAGGAAAACTGGGAAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGTATTACTAGCAGCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 90 bp AGGCTTTGGACCATCTCTTCCTGGACTATTTACTTAGTAACAAGCTaGTCTTATTTGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAG +
Preference number: 1 (lower is better)
Translates to: RLWTISSWTIYLVTS*SYLNCLLVAKGLLQ
Trigger: CTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAATAGTCCAGGAAGAGATGGTCCAAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 90 bp CTAGTAATACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTaGTCAAAACTACATTTCCCAGTTTTCCTTGCAACTACCTATAGC +
Preference number: 1 (lower is better)
Translates to: LVIQNSQMEAGIWQS*SKLHFPVFLATTYS
Trigger: GCTATAGGTAGTTGCAAGGAAAACTGGGAAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGTATTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp AAGGGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTACTGGCTGTCCTTATaGTCTCCAGCTCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: KGLRKRHPLFLYTCKSPLYWLSL*SPAPVP
Trigger: TGGGACAGGAGCTGGAGACCATAAGGACAGCCAGTA...CAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp CTGACTAACGAGCTTCATCCTCTCAGCCATGCGGGACCTCATCCCTaGGGTCCCGCATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: LTNELHPLSHAGPHP*GPACLRKLQSVFSP
Trigger: TGGAGAGAACACACTTTGTAGCTTCCTCAGACATGCGGGACCCAAGGGATGAGGTCCCGCATGGCTGAGAGGATGAAGCTCGTTAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp GGTGGTCTCTCAGCCCATGGCCAGGCCTCTTCCTGCCTAATTGAAACTATTGTACTCAGGAGAGAGCCCTaGCTCAGATGGACCCATCAG +
Preference number: 2 (lower is better)
Translates to: GGLSAHGQASSCLIETIVLRREP*LRWTHQ
Trigger: CTGATGGGTCCATCTGAGCCAGGGCTCTCTCCTGAG...TACAATAGTTTCAATTAGGCAGGAAGAGGCCTGGCCATGGGCTGAGAGACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp GTTCCTCAATGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTGTTaGTCAGAGCAGCCACCACCTGGCAAACTACTCCAGACAGAGCTA +
Preference number: 2 (lower is better)
Translates to: VPQWEERSHRALHAC*SEQPPPGKLLQTEL
Trigger: TAGCTCTGTCTGGAGTAGTTTGCCAGGTGGTGGCTGCTCTGACAAACAGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCATTGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR TCA 90 bp AAGGGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTTAATTCTAGAGGCCTaGGCACAGAGGACCATCCAT +
Preference number: 2 (lower is better)
Translates to: KGLRKRHPLFLYTCKSPLLILEA*AQRTIH
Trigger: ATGGATGGTCCTCTGTGCTCAGGCCTCTAGAATTAA...CAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp CACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCACCTACTGTCTCTTCTTaGTCCTGGACCCAAATGCAT +
Preference number: 2 (lower is better)
Translates to: HPLFLYTCKSPLYLNPRAPTVSS*SWTQMH
Trigger: ATGCATTTGGGTCCAGGAGCAAGAAGAGACAGTAGG...TGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp ACTGAAAGACAGACAGACAGACAGACCCTGTACTCCCTTCTAGTCTaGCTTTCAAGGTTCCCCCAAGGACTTCCTGTCTCGGGCATCTCG +
Preference number: 2 (lower is better)
Translates to: TERQTDRQTLYSLLV*LSRFPQGLPVSGIS
Trigger: CGAGATGCCCGAGACAGGAAGTCCTTGGGGGAACCTTGAAAGCAAGACTAGAAGGGAGTACAGGGTCTGTCTGTCTGTCTGTCTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR TCA 90 bp CCATGGAGGGTGTTCCTCAATGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTCAGCTTAGCATCTTCTaGAATACATCCTGTACCCCC +
Preference number: 2 (lower is better)
Translates to: PWRVFLNGRREAIEPFMPQLSIF*NTSCTP
Trigger: GGGGGTACAGGATGTATTTCAGAAGATGCTAAGCTG...AGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCATTGAGGAACACCCTCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR TCA 90 bp CCATGGAGGGTGTTCCTCAATGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTCAGCAACAGGAAAAGTaGGAACAGCTATCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: PWRVFLNGRREAIEPFMPQQQEK*EQLSRV
Trigger: TACCCTTGATAGCTGTTCTCACTTTTCCTGTTGCTG...AGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCATTGAGGAACACCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp ATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCATCTACAAGGACTCCTaGCTCTCTCAAGTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: MSEEATKCVLSRVPSNASIYKDS*LSQVPR
Trigger: CCGGGGCACTTGAGAGAGCCAGGAGTCCTTGTAGAT...GGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp GGAACTAGAGAGGAAGGCTCTTTGAAGGAGAGGTTCCATGGAGGGTGTTCCTCAAGAGTCCTTTGCAAGTaGCTCCCACAAGACAGCAAC +
Preference number: 2 (lower is better)
Translates to: GTREEGSLKERFHGGCSSRVLCK*LPQDSN
Trigger: GTTGCTGTCTTGTGGGAGCCACTTGCAAAGGACTCT...TGAGGAACACCCTCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCTAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp CACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCAGATACCCTCTATCCAGACCTaGGAGTTGTATGTGAAGCTA +
Preference number: 2 (lower is better)
Translates to: HSSYTPASPHCTSTPGQIPSIQT*ELYVKL
Trigger: TAGCTTCACATACAACTCCCAGGTCTGGATAGAGGG...TATCTGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR TCA 90 bp TTGGGTCTAGAGGTCACAGGCCAGTGGTTCCTGGAGAATGTGCCCACTTTCACACAAGCTGGTCTTATTTaGATTGCTTGCTGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LGLEVTGQWFLENVPTFTQAGLI*IACWLP
Trigger: TGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTG...TGTGAAAGTGGGCACATTCTCCAGGAACCACTGGCCTGTGACCTCTAGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp GAACCCCTGGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGTCTTGGGAACAAAAATaGTGCATAGATGTCCGGGCT +
Preference number: 2 (lower is better)
Translates to: EPLAWYTSLSCNGQQSQVSWEQK*CIDVRA
Trigger: AGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGA...CACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp ATGCTGTGGTTATATGTGAAACTCTTTAGCTCCCACCTCTTGAGGGTGGTCTCTGCATCACCCCCGGCATaGCTTCTTACAGAGGCAATG +
Preference number: 2 (lower is better)
Translates to: MLWLYVKLFSSHLLRVVSASPPA*LLTEAM
Trigger: CATTGCCTCTGTAAGAAGGCATGCCGGGGGTGATGC...AGAGACCACCCTCAAGAGGTGGGAGCTAAAGAGTTTCACATATAACCACAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp CATTTATTTACAAGATTCTGGGAACCCCTGGCATGGTATACCTCCTaGTCCTGTAATGGACAACAGTCCCAGGTGTCAACGGTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: HLFTRFWEPLAWYTS*SCNGQQSQVSTVGL
Trigger: AAGCCCCACCGTTGACACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp TTGGGTCTAGAGGTCACAGGCCAGTGGTTCCTGGAGAATGTGCCCACTTTCACAATAGATGTCCGGGCTTaGTCTTCTCTACTAGAAAGT +
Preference number: 2 (lower is better)
Translates to: LGLEVTGQWFLENVPTFTIDVRA*SSLLES
Trigger: ACTTTCTAGTAGAGAAGAGCAAGCCCGGACATCTAT...TGTGAAAGTGGGCACATTCTCCAGGAACCACTGGCCTGTGACCTCTAGACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp AGCAACAGGAAAAGTGAGAACAGCTATCAAGGGTATATTTGGGACCAGAGGAAGCAGGGTACCTTCCAATaGTTCCCTAGCTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: SNRKSENSYQGYIWDQRKQGTFQ*FPSFLA
Trigger: GGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTG...CTTCCTCTGGTCCCAAATATACCCTTGATAGCTGTTCTCACTTTTCCTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp ATTGGTGTCCTTAAATTACACATTTCCCAGGGCCCTTCCTTCTACTaGGGTGAGTCCTATCTTCCCACCCTGAATCTTTGTTTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: IGVLKLHISQGPSFY*GESYLPTLNLCFQS
Trigger: GCTTTGGAAACAAAGATTCAGGGTGGGAAGATAGGACTCACCCAAGTAGAAGGAAGGGCCCTGGGAAATGTGTAATTTAAGGACACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGAGCTCCTGGACCCAAATaGATTTATTTACAAGATTCT +
Preference number: 2 (lower is better)
Translates to: GITETSTDISGESPGSDGAPGPK*IYLQDS
Trigger: AGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGC...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 90 bp ACCATCTCTTCCTGGACTATTTACTTAGTAACAAGCTGGTCTTATTaGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAGCAGCTTAGC +
Preference number: 2 (lower is better)
Translates to: TISSWTIYLVTSWSY*NCLLVAKGLLQQLS
Trigger: GCTAAGCTGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAATAGTCCAGGAAGAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR GCA 90 bp ACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTGCTCAAAACTACATTTTGGTCTTATTTGAATTaGTTGCTGGTTGCCAAGGGG +
Preference number: 2 (lower is better)
Translates to: TELSNGGRHMAVLLKTTFWSYLN*LLVAKG
Trigger: CCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCA...AAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CCA 90 bp ATGCTGTGGTTATATGTGAAACTCTTTAGCTCCCACCTCTTGAGGGTGGTCTCTTTCCCACAGCACTCTTaGGAACAAAAATGCTGCATA +
Preference number: 2 (lower is better)
Translates to: MLWLYVKLFSSHLLRVVSFPQHS*EQKCCI
Trigger: TATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAA...AGAGACCACCCTCAAGAGGTGGGAGCTAAAGAGTTTCACATATAACCACAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp GGTCCCTTCCTGGCCCCTAGCCTGCTCTTACGGGTGTaGGGGTGGAGGCGTAGTGGCACAGGACTGGTTACA +
Preference number: 3 (lower is better)
Translates to: GPFLAPSLLLRV*GWRRSGTGLVT
Trigger: TGTAACCAGTCCTGTGCCACTACGCCTCCACCCCCACACCCGTAAGAGCAGGCTAGGGGCCAGGAAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp TTCCTGGCCCCTAGCCTGCTCTTACGGGTGTGGGGGTaGAGGCGTAGTGGCACAGGACTGGTTACATTTGGG +
Preference number: 3 (lower is better)
Translates to: FLAPSLLLRVWG*RRSGTGLVTFG
Trigger: CCCAAATGTAACCAGTCCTGTGCCACTACGCCTCCACCCCCACACCCGTAAGAGCAGGCTAGGGGCCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp CCTGAGCACAGAGGACCATCCATCTACAAGGACTCCTaGCTCTCTCAAGTGCCCCGGGATAAGGAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: PEHRGPSIYKDS*LSQVPRDKEEA
Trigger: GGCCTCCTCCTTATCCCGGGGCACTTGAGAGAGCCAGGAGTCCTTGTAGATGGATGGTCCTCTGTGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp GCCATGCGGGACCTCATCCCTTGGGTCCCGCATGTCTaGGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACC +
Preference number: 3 (lower is better)
Translates to: AMRDLIPWVPHV*GSYKVCSLQGT
Trigger: GGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACATGCGGGACCCAAGGGATGAGGTCCCGCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp CACCCCCGGCATGCCTTCTTACAGAGGCAATGGGACTaGCTAACGAGCTTCATCCTCTCAGCCATGCGGGAC +
Preference number: 3 (lower is better)
Translates to: HPRHAFLQRQWD*LTSFILSAMRD
Trigger: GTCCCGCATGGCTGAGAGGATGAAGCTCGTTAGTCAGTCCCATTGCCTCTGTAAGAAGGCATGCCGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp GCAGACCTGTGCTTTCCCAGGGTCCTTCTCCCTCCCTaGATTGGTCACTTGTGGGCAGGAGCCCTGAAATGC +
Preference number: 3 (lower is better)
Translates to: ADLCFPRVLLPP*IGHLWAGALKC
Trigger: GCATTTCAGGGCTCCTGCCCACAAGTGACCAATTCAGGGAGGGAGAAGGACCCTGGGAAAGCACAGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp GGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTaGAAGTCCCCACTGTACCTCAACCCCAGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: GLRKRHPLFLYT*KSPLYLNPRAD
Trigger: ATCTGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp CCTGTGCTTTCCCAGGGTCCTTCTCCCTCCCTGAATTaGTCACTTGTGGGCAGGAGCCCTGAAATGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PVLSQGPSPSLN*SLVGRSPEMPG
Trigger: TCCAGGCATTTCAGGGCTCCTGCCCACAAGTGACCAATTCAGGGAGGGAGAAGGACCCTGGGAAAGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp ATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATaGACCCATCAGTCCCTGGGATGCCCTGACTTCTGT +
Preference number: 3 (lower is better)
Translates to: IHRHLRREPWLR*THQSLGCPDFC
Trigger: ACAGAAGTCAGGGCATCCCAGGGACTGATGGGTCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp AGGACTGGTTACATTTGGGACGCTGTAATATGGGACTaGATGCCGGCAGAGAGTGATAGGGAGGGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: RTGYIWDAVIWD*MPAESDREGER
Trigger: CCTCTCTCCCTCCCTATCACTCTCTGCCGGCATCCAGTCCCATATTACAGCGTCCCAAATGTAACCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp TCTCTCCAGGGTACCTTCCAATGCTTCCCTAGCTTCTTGGCCCACATCAAGAGCCCCTACTGTCTCTTCTaGCTCCTGGACCCAAATGCA +
Preference number: 3 (lower is better)
Translates to: SLQGTFQCFPSFLAHIKSPYCLF*LLDPNA
Trigger: TGCATTTGGGTCCAGGAGCAAGAAGAGACAGTAGGG...GCTCTTGATGTGGGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp TCCCTCCCTGAATTGGTCACTTGTGGGCAGGAGCCCTaGAATGCCTGGAACAGGATATCAATGAAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: SLPELVTCGQEP*NAWNRISMKQL
Trigger: CAGCTGCTTCATTGATATCCTGTTCCAGGCATTTCAGGGCTCCTGCCCACAAGTGACCAATTCAGGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp ACAAGCTTGTCCCTTTTAACCACTGTGACCCTTGGGTaGATGAGGCCAGCTGGACGCCAGTATAGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: TSLSLLTTVTLG*MRPAGRQYRLP
Trigger: AGGAAGCCTATACTGGCGTCCAGCTGGCCTCATTCACCCAAGGGTCACAGTGGTTAAAAGGGACAAGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp ATGCCCTCCAGGAACACCTCTTTCCCACAGCACTCTTaGGAACAAAAATGCTGCATAGATGTCCGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: MPSRNTSFPQHS*EQKCCIDVRAC
Trigger: GCAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTGTTCCTGGAGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp AGCCCTTCATGCCTGTTTGTCAGAGCAGCCACCACCTaGCAAACTACTCCAGACAGAGCTACATCCAAGAGA +
Preference number: 3 (lower is better)
Translates to: SPSCLFVRAATT*QTTPDRATSKR
Trigger: TCTCTTGGATGTAGCTCTGTCTGGAGTAGTTTGCCAGGTGGTGGCTGCTCTGACAAACAGGCATGAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp CACCTGGCAAACTACTCCAGACAGAGCTACATCCAAGAGATGCTGAGGTGGCAGTGCTTCCCTAGCTTCTaGGCCCACATCAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: HLANYSRQSYIQEMLRWQCFPSF*AHIKSK
Trigger: TTTGCTCTTGATGTGGGCCAAGAAGCTAGGGAAGCA...CTGCCACCTCAGCATCTCTTGGATGTAGCTCTGTCTGGAGTAGTTTGCCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGAAGAGAGGAAGGCTCTTaGAAGGAGAGGTTCCATGGA +
Preference number: 3 (lower is better)
Translates to: GITETSTDISGESPGSDGREEGS*KERFHG
Trigger: TCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCT...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp CTTCTCTTGTCTCGCCTACTATACTGGCTGTCCTTATaGTCTCCAGCTCCTGTCCCACCCCAAAAACTAGAC +
Preference number: 3 (lower is better)
Translates to: LLLSRLLYWLSL*SPAPVPPQKLD
Trigger: GTCTAGTTTTTGGGGTGGGACAGGAGCTGGAGACCATAAGGACAGCCAGTATAGTAGGCGAGACAAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp TCATGCCTGTTTGTCAGAGCAGCCACCACCTGGCAAACTACTCCAGACAGAGCTCTATCAAGGGTATATTaGGGACCAGAGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: SCLFVRAATTWQTTPDRALSRVY*GPEEDS
Trigger: GGAATCTTCCTCTGGTCCCAAATATACCCTTGATAG...AGCTCTGTCTGGAGTAGTTTGCCAGGTGGTGGCTGCTCTGACAAACAGGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp TCTCAATCCCTAGAGGAACTAGAGAGGAAGGCTCTTTaGAGGAGAGGTTCCATGGAGGGTGTTCCTCAATGG +
Preference number: 3 (lower is better)
Translates to: SQSLEELERKAL*RRGSMEGVPQW
Trigger: CCATTGAGGAACACCCTCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCTAGTTCCTCTAGGGATTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp AGAGTTCACACTTTCTCCTCTTATCATGTGAGCAGGTaGAGCCCCTCTATCCAGACCTGGGAGTTGTATGTG +
Preference number: 3 (lower is better)
Translates to: RVHTFSSYHVSR*SPSIQTWELYV
Trigger: CACATACAACTCCCAGGTCTGGATAGAGGGGCTGCACCTGCTCACATGATAAGAGGAGAAAGTGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp GAGGGTGGTCTCTCAGCCCATGGCCAGGCCTCTTCCTaGCTAATTGAAACTATTGTACTATCTGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: EGGLSAHGQASS*LIETIVLSEKE
Trigger: TTCCTTCTCAGATAGTACAATAGTTTCAATTAGGCAGGAAGAGGCCTGGCCATGGGCTGAGAGACCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp CTCTCCAGGGTACCTTCCAATGCTTCCCTAGCTTCTTaGCCCACATCAAGAGCAAATACAGTTTCTAGTCCC +
Preference number: 3 (lower is better)
Translates to: LSRVPSNASLAS*PTSRANTVSSP
Trigger: GGGACTAGAAACTGTATTTGCTCTTGATGTGGGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp TCACATTCAATTCGGTTTCTCTTCATATTGGGGGAATaGTCCTGGGTTCCCTGCCCCTCAACTTCCCAGTGT +
Preference number: 3 (lower is better)
Translates to: SHSIRFLFILGE*SWVPCPSTSQC
Trigger: ACACTGGGAAGTTGAGGGGCAGGGAACCCAGGACCATTCCCCCAATATGAAGAGAAACCGAATTGAATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp GCCCACTTTCACATTCAATTCGGTTTCTCTTCATATTaGGGGAATGGTCCTGGGTTCCCTGCCCCTCAACTT +
Preference number: 3 (lower is better)
Translates to: AHFHIQFGFSSY*GNGPGFPAPQL
Trigger: AAGTTGAGGGGCAGGGAACCCAGGACCATTCCCCCAATATGAAGAGAAACCGAATTGAATGTGAAAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp GGAACTAGAGAGGAAGGCTCTTTGAAGGAGAGGTTCCATGGAGGGTGTTCCTCAACAAGCTGGTCTTATTaGAATTGCTTGCTGGTTGCC +
Preference number: 3 (lower is better)
Translates to: GTREEGSLKERFHGGCSSTSWSY*NCLLVA
Trigger: GGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGT...TGAGGAACACCCTCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCTAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp AGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATaGTTCCCTAGCTTCTTGGCCCACATCAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: SYKVCSLQGTFQ*FPSFLAHIKSK
Trigger: TTTGCTCTTGATGTGGGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp TTTCTCTTCATATTGGGGGAATGGTCCTGGGTTCCCTaGCCCTCAACTTCCCAGTGTATGCTGTGGTTATAT +
Preference number: 3 (lower is better)
Translates to: FLFILGEWSWVP*PSTSQCMLWLY
Trigger: ATATAACCACAGCATACACTGGGAAGTTGAGGGGCAGGGAACCCAGGACCATTCCCCCAATATGAAGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp TGTCCTGTAATGGACAACAGTCCCAGGTGTCAACGGTaGGGCTTCTCTTTAACTAGACTGAAGTTCCATAGC +
Preference number: 3 (lower is better)
Translates to: CPVMDNSPRCQR*GFSLTRLKFHS
Trigger: GCTATGGAACTTCAGTCTAGTTAAAGAGAAGCCCCACCGTTGACACCTGGGACTGTTGTCCATTACAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp AACAGGAAAAGTGAGAACAGCTATCAAGGGTATATTTaGGACCAGAGGAAGATTCCGCATCACCCCCGGCAT +
Preference number: 3 (lower is better)
Translates to: NRKSENSYQGYI*DQRKIPHHPRH
Trigger: ATGCCGGGGGTGATGCGGAATCTTCCTCTGGTCCCAAATATACCCTTGATAGCTGTTCTCACTTTTCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR-3UTR CAA 90 bp AACAAGCTGGTCTTATTTGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAGCACATAGATGTCCGGGCTaGCTCTTCTCTACTAGAAAG +
Preference number: 3 (lower is better)
Translates to: NKLVLFELLAGCQGASTAHRCPG*LFSTRK
Trigger: CTTTCTAGTAGAGAAGAGCAAGCCCGGACATCTATG...TGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp AACACCTCTTTCCCACAGCACTCTTGGGAACAAAAATaGTGCATAGATGTCCGGGCTTGCTCTTCTCTACTA +
Preference number: 3 (lower is better)
Translates to: NTSFPQHSWEQK*CIDVRACSSLL
Trigger: TAGTAGAGAAGAGCAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp AAGACACTATCAGAAGCAACAGACACATCTGACTCCTaGCCTTCACAGGGAAGAGTTCACACTTTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: KTLSEATDTSDS*PSQGRVHTFSS
Trigger: AGAGGAGAAAGTGTGAACTCTTCCCTGTGAAGGGCAGGAGTCAGATGTGTCTGTTGCTTCTGATAGTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp TGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTaGGAACCCCTGGCATGGTATACCTCCTTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: CSWTQMHLFTRF*EPLAWYTSLSC
Trigger: ACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR TCA 72 bp CTTCCTTCTACTTGGGTGAGTCCTATCTTCCCACCCTaGATCTTTGTTTCCAAAGCTTCAACAAGCTTGTCC +
Preference number: 3 (lower is better)
Translates to: LPSTWVSPIFPP*IFVSKASTSLS
Trigger: GGACAAGCTTGTTGAAGCTTTGGAAACAAAGATTCAGGGTGGGAAGATAGGACTCACCCAAGTAGAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp CAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTaGTCAAAACTACATTTCCCAGTTTTCCTTGCAACT +
Preference number: 3 (lower is better)
Translates to: QNSQMEAGIWQS*SKLHFPVFLAT
Trigger: AGTTGCAAGGAAAACTGGGAAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp ATGCATTTATTTACAAGATTCTGGGAACCCCTGGCATaGTATACCTCCTTGTCCTGTAATGGACAACAGTCC +
Preference number: 3 (lower is better)
Translates to: MHLFTRFWEPLA*YTSLSCNGQQS
Trigger: GGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CCA 72 bp CCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTaGCATGGTATACCTCCTTGTCCTGTAATGGACAAC +
Preference number: 3 (lower is better)
Translates to: PKCIYLQDSGNP*HGIPPCPVMDN
Trigger: GTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR GCA 72 bp ACTATTTACTTAGTAACAAGCTGGTCTTATTTGAATTaGTTGCTGGTTGCCAAGGGGCTTCTACAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: TIYLVTSWSYLN*LLVAKGLLQQL
Trigger: AAGCTGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp AAGGGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTGGGCACCCCGCAACTaGGCCCGTGCCAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KGLRKRHPLFLYTCKSPLWAPRN*ARASLA
Trigger: TGCCAGGCTGGCACGGGCCCAGTTGCGGGGTGCCCA...CAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp CACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCAAGCAGGTCCCCGGGCTaGGGAGCCCTCAGACACTTC +
Preference number: 4 (lower is better)
Translates to: HPLFLYTCKSPLYLNPRASRSPG*GALRHF
Trigger: GAAGTGTCTGAGGGCTCCTCAGCCCGGGGACCTGCT...TGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp AGGGAGGGAGAGAGGCGTAGAGAGGCCTCTGTCAGTCTCCTTCTCTTGTCTCGCGGCAGGTTGGAATACTaGACCACCGTGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: REGERRREASVSLLLLSRGRLEY*TTVGTP
Trigger: CGGGGTGCCCACGGTGGTGCAGTATTCCAACCTGCC...GCGAGACAAGAGAAGGAGACTGACAGAGGCCTCTCTACGCCTCTCTCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp CCATGGAGGGTGTTCCTCAATGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTTGCCAGCCCGCGAAGTaGAGGGGGCTGCCGAGAGAC +
Preference number: 4 (lower is better)
Translates to: PWRVFLNGRREAIEPFMPCQPAK*RGLPRD
Trigger: GTCTCTCGGCAGCCCCCTGCACTTCGCGGGCTGGCA...AGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCATTGAGGAACACCCTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp AGGGAGGGAGAGAGGCGTAGAGAGGCCTCTGTCAGTCTCCTTCTCTTGTCTCGCGGAGGGTACTCCTGCTaGGTTCCGTCGAACCATCCC +
Preference number: 4 (lower is better)
Translates to: REGERRREASVSLLLLSRGGYSC*VPSNHP
Trigger: GGGATGGTTCGACGGAACGCAGCAGGAGTACCCTCC...GCGAGACAAGAGAAGGAGACTGACAGAGGCCTCTCTACGCCTCTCTCCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp AAGGGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTGCAAGTCCCCACTGACACCACCTCCAGTGTaGCCGGCTGCTTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KGLRKRHPLFLYTCKSPLTPPPV*PAASRR
Trigger: TCTTCTGGAAGCAGCCGGGCACACTGGAGGTGGTGT...CAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp CCATGGAGGGTGTTCCTCAATGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTAAGCACCAGGAGCAATaGCAGCCCGCGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PWRVFLNGRREAIEPFMPKHQEQ*QPAKCR
Trigger: CCTGCACTTCGCGGGCTGGCATTGCTCCTGGTGCTT...AGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCATTGAGGAACACCCTCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp TTGGGTCTAGAGGTCACAGGCCAGTGGTTCCTGGAGAATGTGCCCACTTTCACACTTGCTCGGGGACAGTaGCTGGAGCAGGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGLEVTGQWFLENVPTFTLARGQ*LEQGRV
Trigger: CACTCTCCCCTGCTCCAGCCACTGTCCCCGAGCAAG...TGTGAAAGTGGGCACATTCTCCAGGAACCACTGGCCTGTGACCTCTAGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp AAGGGCCTCAGGAAGAGGCACCCACTCTTCCTATACACCTGCAAGTCCCCACTGCCTTGGTGGGCAGGTTaGAATACTGCACCACCGTGG +
Preference number: 4 (lower is better)
Translates to: KGLRKRHPLFLYTCKSPLPWWAG*NTAPPW
Trigger: CCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGG...CAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTGCCTCTTCCTGAGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp TGGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGTCAACGGCGGGAGACGCCATCCTaGGTGAGGAAGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WHGIPPCPVMDNSPRCQRRETPS*VRKVRR
Trigger: CCTGCGCACCTTCCTCACCCAGGATGGCGTCTCCCG...CCGTTGACACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp GAACCCCTGGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGAGATGCCCTCGGGTGTaGAGCACCAGGAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: EPLAWYTSLSCNGQQSQVRCPRV*STRSNA
Trigger: GGCATTGCTCCTGGTGCTTCACACCCGAGGGCATCT...CACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp AAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCCTAGCTTCTTGGCCCACAGCCCACCCTCTTCAGTaGTCTTGGGCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: KCVLSRVPSNASLASWPTAHPLQ*SWAPGR
Trigger: CCTACCGGGAGCCCAAGAGCACTGAAGAGGGTGGGC...TGTGGGCCAAGAAGCTAGGGAAGCATTGGAAGGTACCCTGGAGAGAACACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGAGCCGGAAGTTGGGCATaGTGTAGTACTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GITETSTDISGESPGSDGAGSWA*CSTGGG
Trigger: GCCGCCGCCAGTACTACACCATGCCCAACTTCCGGC...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp GAGCTTCATCCTCTCAGCCATGCGGGACCTCATCCCTaGGGTCCCGCATGTCTGAGGAAGCTACAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: ELHPLSHAGPHP*GPACLRKLQSV
Trigger: CACACTTTGTAGCTTCCTCAGACATGCGGGACCCAAGGGATGAGGTCCCGCATGGCTGAGAGGATGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGAAGACGCCATCCTGGGTaGGGAAGGTGCGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GITETSTDISGESPGSDGRRHPG*GRCAGS
Trigger: ACTACCTGCGCACCTTCCTCACCCAGGATGGCGTCT...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp CACCTGGCAAACTACTCCAGACAGAGCTACATCCAAGAGATGCTGAGGTGGCAGACGAAGTCCACCCGGTaGAGTTCCTCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HLANYSRQSYIQEMLRWQTKSTR*SSSVAL
Trigger: CAAGGCCACAGAGGAACTGCACCGGGTGGACTTCGT...CTGCCACCTCAGCATCTCTTGGATGTAGCTCTGTCTGGAGTAGTTTGCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp GAACCCCTGGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGAGCCCATACACGGCCTaGAGCATGTCCATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EPLAWYTSLSCNGQQSQVSPYTA*SMSMVQ
Trigger: CTGCACCATGGACATGCTGCAGGCCGTGTATGGGCT...CACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp GAACCCCTGGCATGGTATACCTCCTTGTCCTGTAATGGACAACAGTCCCAGGTGCCTGCAGCATGTCCATaGTGCAGCCTGACACCACCT +
Preference number: 4 (lower is better)
Translates to: EPLAWYTSLSCNGQQSQVPAACP*CSLTPP
Trigger: AGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGG...CACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp TGGGAGGAGAGAAGCCATAGAGCCCTTCATGCCTGTTaGTCAGAGCAGCCACCACCTGGCAAACTACTCCAG +
Preference number: 4 (lower is better)
Translates to: WEERSHRALHAC*SEQPPPGKLLQ
Trigger: CTGGAGTAGTTTGCCAGGTGGTGGCTGCTCTGACAAACAGGCATGAAGGGCTCTATGGCTTCTCTCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp AGCAACAGGAAAAGTGAGAACAGCTATCAAGGGTATATTTGGGACCAGAGGAAGCATCGGGCCGCAGGTTaGGCAGGCGGGAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: SNRKSENSYQGYIWDQRKHRAAG*AGGRRH
Trigger: ATGGCGTCTCCCGCCTGCGCAACCTGCGGCCCGATG...CTTCCTCTGGTCCCAAATATACCCTTGATAGCTGTTCTCACTTTTCCTGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp CACCTCTTTCCCACAGCACTCTTGGGAACAAAAATGCTGCATAGATGTCCGGGCGCAGCATGTCCATGGTaGAGCCTGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HLFPTALLGTKMLHRCPGAACPW*SLTPPP
Trigger: TGGAGGTGGTGTCAGGCTGCACCATGGACATGCTGC...GCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp CTTAGTAACAAGCTGGTCTTATTTGAATTGCTTGCTGGTTGCCAAGGGGCTTCTGGCGGCGCAGGCGGATaGCATCCAGCCCATACACGG +
Preference number: 4 (lower is better)
Translates to: LSNKLVLFELLAGCQGASGGAGG*HPAHTR
Trigger: CCGTGTATGGGCTGGATGGCATCCGCCTGCGCCGCC...AGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGACTAGGATGTGGCCGGTaGGGTTCTCATACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GITETSTDISGESPGSDGLGCGR*GSHTAG
Trigger: TCCGGCAGTATGAGAACCGCACCGGCCACATCCTAG...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp ACAGCACTCTTGGGAACAAAAATGCTGCATAGATGTCCGGGCTTGCTCTTCTCTAATACTGCACCACCGTaGGCACCCCGCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TALLGTKMLHRCPGLLFSNTAPP*APRNWA
Trigger: GGCCCAGTTGCGGGGTGCCCACGGTGGTGCAGTATT...AGAGAAGAGCAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp GGAACTAGAGAGGAAGGCTCTTTGAAGGAGAGGTTCCATGGAGGGTGTTCCTCAAGGGACTTCCGCATGTaGAAGGCGAAGGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GTREEGSLKERFHGGCSSRDFRM*KAKGSV
Trigger: GACAGAGCCCTTCGCCTTCCACATGCGGAAGTCCCT...TGAGGAACACCCTCCATGGAACCTCTCCTTCAAAGAGCCTTCCTCTCTAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp CACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCAGATAGTACCAGGCGTTCCTTaGTGGGCAGGTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: HSSYTPASPHCTSTPGQIVPGVP*WAGWNT
Trigger: AGTATTCCAACCTGCCCACCAAGGAACGCCTGGTAC...TATCTGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp CACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCAGATACATACTGCCGGAAGTTaGGCATGGTGTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: HSSYTPASPHCTSTPGQIHTAGS*AWCSTG
Trigger: GCCAGTACTACACCATGCCCAACTTCCGGCAGTATG...TATCTGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGACATACATGTGCTCACTaGGGTCCGCAGGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: GITETSTDISGESPGSDGHTCAH*GPQEGT
Trigger: AGTACCCTCCTGCGGACCCCAGTGAGCACATGTATG...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp CAGACAGACAGACAGACCCTGTACTCCCTTCTAGTCTaGCTTTCAAGGTTCCCCCAAGGACTTCCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: QTDRQTLYSLLV*LSRFPQGLPVS
Trigger: CGAGACAGGAAGTCCTTGGGGGAACCTTGAAAGCAAGACTAGAAGGGAGTACAGGGTCTGTCTGTCTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp CTGTGGTTATATGTGAAACTCTTTAGCTCCCACCTCTaGAGGGTGGTCTCTCAGCCCATGGCCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LWLYVKLFSSHL*RVVSQPMARPL
Trigger: AAGAGGCCTGGCCATGGGCTGAGAGACCACCCTCAAGAGGTGGGAGCTAAAGAGTTTCACATATAACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp ACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTGCTCAAAACTACATTTGCAATCCAGCCGTCCTaGCGGCCACCAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TELSNGGRHMAVLLKTTFAIQPS*RPPGGK
Trigger: TTTCCCACCTGGTGGCCGTCAGGACGGCTGGATTGC...AAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp TCTTGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTGGCACGAAGTGCAGGGGGCTaGCGAGAGACCACTGCACTA +
Preference number: 4 (lower is better)
Translates to: SCSWTQMHLFTRFWEPLARSAGG*RETTAL
Trigger: TAGTGCAGTGGTCTCTCGGCAGCCCCCTGCACTTCG...TGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp TTGGGTCTAGAGGTCACAGGCCAGTGGTTCCTGGAGAATGTGCCCACTTTCACAGGGAAGTCGCCATTCTaGGCTGACACGAGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LGLEVTGQWFLENVPTFTGKSPF*ADTSLK
Trigger: CTTTAAACTCGTGTCAGCCCAGAATGGCGACTTCCC...TGTGAAAGTGGGCACATTCTCCAGGAACCACTGGCCTGTGACCTCTAGACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp ACAGCACTCTTGGGAACAAAAATGCTGCATAGATGTCCGGGCTTGCTCTTCTCTAGTGCAGGAAGGATATaGGGCACAGGCCAGCCATAC +
Preference number: 4 (lower is better)
Translates to: TALLGTKMLHRCPGLLFSSAGRI*GTGQPY
Trigger: GTATGGCTGGCCTGTGCCTCATATCCTTCCTGCACT...AGAGAAGAGCAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp ACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTGCTCAAAACTACATTTCTGCCGAGAGACCACTaGACTAGGATGTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TELSNGGRHMAVLLKTTFLPRDH*TRMWPV
Trigger: CACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAG...AAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp TCTTGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTGGCAGCAGGAGGGTACTCCTaGTGCGTTCCGTCGAACCAT +
Preference number: 4 (lower is better)
Translates to: SCSWTQMHLFTRFWEPLAAGGYS*CVPSNH
Trigger: ATGGTTCGACGGAACGCAGCAGGAGTACCCTCCTGC...TGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp ATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCCCAGGCGTTCCTTGGTaGGCAGGTTGGAATACTGCA +
Preference number: 4 (lower is better)
Translates to: MSEEATKCVLSRVPSNASPGVPW*AGWNTA
Trigger: TGCAGTATTCCAACCTGCCCACCAAGGAACGCCTGG...GGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp GGTGGTCTCTCAGCCCATGGCCAGGCCTCTTCCTGCCTAATTGAAACTATTGTAACTCGAAGGTGCCATTaGTCAGCATCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: GGLSAHGQASSCLIETIVTRRCH*SASLGT
Trigger: AGTTCCGAGAGATGCTGACCAATGGCACCTTCGAGT...TACAATAGTTTCAATTAGGCAGGAAGAGGCCTGGCCATGGGCTGAGAGACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp TCTTGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTGGCACTGACGGCCACCAGGTaGGAAATGGTCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SCSWTQMHLFTRFWEPLALTATR*EMVQED
Trigger: GTCTTCCTGGACCATTTCCCACCTGGTGGCCGTCAG...TGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp TATGCCCTCCAGGAACACCTCTTTCCCACAGCACTCTaGGGAACAAAAATGCTGCATAGATGTCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YALQEHLFPTAL*GTKMLHRCPGL
Trigger: CAAGCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTGTTCCTGGAGGGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp ACAAGATTCTGGGAACCCCTGGCATGGTATACCTCCTaGTCCTGTAATGGACAACAGTCCCAGGTGTCAACG +
Preference number: 4 (lower is better)
Translates to: TRFWEPLAWYTS*SCNGQQSQVST
Trigger: CGTTGACACCTGGGACTGTTGTCCATTACAGGACAAGGAGGTATACCATGCCAGGGGTTCCCAGAATCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp GGTGGTCTCTCAGCCCATGGCCAGGCCTCTTCCTGCCTAATTGAAACTATTGTACAGCCATACAGAACATaGGAAAGAGCTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: GGLSAHGQASSCLIETIVQPYRT*ERACSV
Trigger: GACGCTACAAGCTCTTTCTCATGTTCTGTATGGCTG...TACAATAGTTTCAATTAGGCAGGAAGAGGCCTGGCCATGGGCTGAGAGACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp ATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCTCCAGTGTGCCCGGCTaGTTCCAGAAGAAACCATAC +
Preference number: 4 (lower is better)
Translates to: MSEEATKCVLSRVPSNASSSVPG*FQKKPY
Trigger: GTATGGTTTCTTCTGGAAGCAGCCGGGCACACTGGA...GGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp ATGCTGTGGTTATATGTGAAACTCTTTAGCTCCCACCTCTTGAGGGTGGTCTCTGTGCGGTTCTCATACTaGCGGAAGTTGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: MLWLYVKLFSSHLLRVVSVRFSY*RKLGMV
Trigger: CACCATGCCCAACTTCCGGCAGTATGAGAACCGCAC...AGAGACCACCCTCAAGAGGTGGGAGCTAAAGAGTTTCACATATAACCACAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp AACAAGCTGGTCTTATTTGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAGCACACTGCACTAGGATGTaGCCGGTGCGGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: NKLVLFELLAGCQGASTAHCTRM*PVRFSY
Trigger: GTATGAGAACCGCACCGGCCACATCCTAGTGCAGTG...TGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp TCTTGCTCCTGGACCCAAATGCATTTATTTACAAGATTCTGGGAACCCCTGGCATCCTGGTACCTGGTTTaGAGCACACACCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SCSWTQMHLFTRFWEPLASWYLV*STHHQL
Trigger: AAGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGA...TGCCAGGGGTTCCCAGAATCTTGTAAATAAATGCATTTGGGTCCAGGAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CCA 90 bp ATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCAGCAGGTCGAACTCGTaGTTGATGTTGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: MSEEATKCVLSRVPSNASSRSNS*LMLMAL
Trigger: CAACGCCATCAACATCAACCACGAGTTCGACCTGCT...GGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR TCA 90 bp ATGTCTGAGGAAGCTACAAAGTGTGTTCTCTCCAGGGTACCTTCCAATGCTTCCGTCGCCATTCTGGGCTaGCACGAGTTTAAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: MSEEATKCVLSRVPSNASVAILG*HEFKVD
Trigger: ATCTACTTTAAACTCGTGTCAGCCCAGAATGGCGAC...GGAAGCATTGGAAGGTACCCTGGAGAGAACACACTTTGTAGCTTCCTCAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp ACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTGCTCAAAACTACATTTGGATGTACTCGAAGGTaGCATTGGTCAGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: TELSNGGRHMAVLLKTTFGCTRR*HWSASL
Trigger: GAGAGATGCTGACCAATGGCACCTTCGAGTACATCC...AAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR GCA 90 bp ATGCTGTGGTTATATGTGAAACTCTTTAGCTCCCACCTCTTGAGGGTGGTCTCTAAGGTCTTAAAGAAGTaGAGGAAGGATATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: MLWLYVKLFSSHLLRVVSKVLKK*RKDMRH
Trigger: GTGCCTCATATCCTTCCTGCACTTCTTTAAGACCTT...AGAGACCACCCTCAAGAGGTGGGAGCTAAAGAGTTTCACATATAACCACAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp ATTTACTTAGTAACAAGCTGGTCTTATTTGAATTGCTaGCTGGTTGCCAAGGGGCTTCTACAGCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: IYLVTSWSYLNC*LVAKGLLQQLS
Trigger: GCTAAGCTGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp GACTATTTACTTAGTAACAAGCTGGTCTTATTTGAATaGCTTGCTGGTTGCCAAGGGGCTTCTACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DYLLSNKLVLFE*LAGCQGASTAA
Trigger: AGCTGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
3UTR CAA 72 bp TCCTGGACTATTTACTTAGTAACAAGCTGGTCTTATTaGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: SWTIYLVTSWSY*NCLLVAKGLLQ
Trigger: CTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTTACTAAGTAAATAGTCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp ATACTGCACCACCGTGGGCACCCCGCAACTGGGCCCGTGCCAGCCTaGCAGGCACACACACTCAACCCACTTGCGCCTAGTGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: ILHHRGHPATGPVPA*QAHTLNPLAPSAPA
Trigger: AGCCGGGGCACTAGGCGCAAGTGGGTTGAGTGTGTGTGCCTGCCAGGCTGGCACGGGCCCAGTTGCGGGGTGCCCACGGTGGTGCAGTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 90 bp CGTACTCAACACGTGCCTCATGGGCCTCCGAGCAGGTCCCCGGGCTaGGGAGCCCTCAGACACTTCGGGCTTCTCCTCTGTCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RTQHVPHGPPSRSPG*GALRHFGLLLCPPW
Trigger: CCAGGGCGGACAGAGGAGAAGCCCGAAGTGTCTGAGGGCTCCTCAGCCCGGGGACCTGCTCGGAGGCCCATGAGGCACGTGTTGAGTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 90 bp CGTCATCGGGCCGCAGGTTGCGCAGGCGGGAGACGCCATCCTGGGTaGGGAAGGTGCGCAGGTAGTCATCCGCAATCCAGCCGTCCTGAC +
Preference number: 5 (lower is better)
Translates to: RHRAAGCAGGRRHPG*GRCAGSHPQSSRPD
Trigger: GTCAGGACGGCTGGATTGCGGATGACTACCTGCGCACCTTCCTCACCCAGGATGGCGTCTCCCGCCTGCGCAACCTGCGGCCCGATGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp TACTGGCGGCGGCGCAGGCGGATGCCATCCAGCCCATACACGGCCTaGAGCATGTCCATGGTGCAGCCTGACACCACCTCCAGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: YWRRRRRMPSSPYTA*SMSMVQPDTTSSVP
Trigger: GGGCACACTGGAGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATGGCATCCGCCTGCGCCGCCGCCAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp GCCGGAAGTTGGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGATaGCATCCAGCCCATACACGGCCTGCAGCATGTCCATGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AGSWAWCSTGGGAGG*HPAHTRPAACPWCS
Trigger: GCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp ATGCCCTCGGGTGTGAAGCACCAGGAGCAATGCCAGCCCGCGAAGTaGAGGGGGCTGCCGAGAGACCACTGCACTAGGATGTGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: MPSGVKHQEQCQPAK*RGLPRDHCTRMWPV
Trigger: CACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCCCCCTGCACTTCGCGGGCTGGCATTGCTCCTGGTGCTTCACACCCGAGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp AGGTTGGAATACTGCACCACCGTGGGCACCCCGCAACTGGGCCCGTaGCAGCCTGGCAGGCACACACACTCAACCCACTTGCGCCTAGTG +
Preference number: 5 (lower is better)
Translates to: RLEYCTTVGTPQLGP*QPGRHTHSTHLRLV
Trigger: CACTAGGCGCAAGTGGGTTGAGTGTGTGTGCCTGCCAGGCTGGCACGGGCCCAGTTGCGGGGTGCCCACGGTGGTGCAGTATTCCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp TGGTGTCCTCCGGCAACACGAAGTCCACCCGGTGCAGTTCCTCTGTaGCCTTGCTCGGGGACAGTGGCTGGAGCAGGGGAGAGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: WCPPATRSPPGAVPL*PCSGTVAGAGESGS
Trigger: ACTCCCACTCTCCCCTGCTCCAGCCACTGTCCCCGAGCAAGGCCACAGAGGAACTGCACCGGGTGGACTTCGTGTTGCCGGAGGACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp GAGCAATGCCAGCCCGCGAAGTGCAGGGGGCTGCCGAGAGACCACTaGACTAGGATGTGGCCGGTGCGGTTCTCATACTGCCGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: EQCQPAKCRGLPRDH*TRMWPVRFSYCRKL
Trigger: CAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCCCCCTGCACTTCGCGGGCTGGCATTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp CTAGGATGTGGCCGGTGCGGTTCTCATACTGCCGGAAGTTGGGCATaGTGTAGTACTGGCGGCGGCGCAGGCGGATGCCATCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: LGCGRCGSHTAGSWA*CSTGGGAGGCHPAH
Trigger: ATGGGCTGGATGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp CACCCACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCATCATCGGGCCGCAGGTaGCGCAGGCGGGAGACGCCA +
Preference number: 5 (lower is better)
Translates to: HPLFLYTCKSPLYLNPRASSGRR*RRRETP
Trigger: TGGCGTCTCCCGCCTGCGCAACCTGCGGCCCGATGA...TGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp GGAGCATACATGTGCTCACTGGGGTCCGCAGGAGGGTACTCCTGCTaGGTTCCGTCGAACCATCCCCCAGTGCGGATCAAGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: GAYMCSLGSAGGYSC*VPSNHPPVRIKLRM
Trigger: CATCCGCAGCTTGATCCGCACTGGGGGATGGTTCGACGGAACGCAGCAGGAGTACCCTCCTGCGGACCCCAGTGAGCACATGTATGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp ACTGCACTAGGATGTGGCCGGTGCGGTTCTCATACTGCCGGAAGTTaGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGATGCCATCCA +
Preference number: 5 (lower is better)
Translates to: TALGCGRCGSHTAGS*AWCSTGGGAGGCHP
Trigger: TGGATGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp ACAAAATACTCCGTGGTGTCCTCCGGCAACACGAAGTCCACCCGGTaGAGTTCCTCTGTGGCCTTGCTCGGGGACAGTGGCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TKYSVVSSGNTKSTR*SSSVALLGDSGWSR
Trigger: CCTGCTCCAGCCACTGTCCCCGAGCAAGGCCACAGAGGAACTGCACCGGGTGGACTTCGTGTTGCCGGAGGACACCACGGAGTATTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp AGTGCAGGGGGCTGCCGAGAGACCACTGCACTAGGATGTGGCCGGTaGGGTTCTCATACTGCCGGAAGTTGGGCATGGTGTAGTACTGGC +
Preference number: 5 (lower is better)
Translates to: SAGGCRETTALGCGR*GSHTAGSWAWCSTG
Trigger: GCCAGTACTACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCCCCCTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp TTAGGAGCATACATGTGCTCACTGGGGTCCGCAGGAGGGTACTCCTaGTGCGTTCCGTCGAACCATCCCCCAGTGCGGATCAAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LGAYMCSLGSAGGYS*CVPSNHPPVRIKLR
Trigger: CCGCAGCTTGATCCGCACTGGGGGATGGTTCGACGGAACGCAGCAGGAGTACCCTCCTGCGGACCCCAGTGAGCACATGTATGCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 90 bp GCCATCCAGCCCATACACGGCCTGCAGCATGTCCATGGTGCAGCCTaGCACCACCTCCAGTGTGCCCGGCTGCTTCCAGAAGAAACCATA +
Preference number: 5 (lower is better)
Translates to: AIQPIHGLQHVHGAA*HHLQCARLLPEETI
Trigger: TATGGTTTCTTCTGGAAGCAGCCGGGCACACTGGAGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 90 bp TCCGCATGTGGAAGGCGAAGGGCTCTGTCCAGCCATCGTAGAGTTTaGGGAACAGCACACCATCACGCGCAGGGATCTCGTCCGCATCGT +
Preference number: 5 (lower is better)
Translates to: SACGRRRALSSHRRV*GTAHHHAQGSRPHR
Trigger: ACGATGCGGACGAGATCCCTGCGCGTGATGGTGTGCTGTTCCTCAAACTCTACGATGGCTGGACAGAGCCCTTCGCCTTCCACATGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 90 bp AGCATGTCCATGGTGCAGCCTGACACCACCTCCAGTGTGCCCGGCTaGTTCCAGAAGAAACCATACAGGGACTTCCGCATGTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SMSMVQPDTTSSVPG*FQKKPYRDFRMWKA
Trigger: CGCCTTCCACATGCGGAAGTCCCTGTATGGTTTCTTCTGGAAGCAGCCGGGCACACTGGAGGTGGTGTCAGGCTGCACCATGGACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp GCGCAGGTAGTCATCCGCAATCCAGCCGTCCTGACGGCCACCAGGTaGGAAATGGTCCAGGAAGACATAGAGCACCTTGTGGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: AQVVIRNPAVLTATR*EMVQEDIEHLVADV
Trigger: TACATCCGCCACAAGGTGCTCTATGTCTTCCTGGACCATTTCCCACCTGGTGGCCGTCAGGACGGCTGGATTGCGGATGACTACCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp CACTCTTCCTATACACCTGCAAGTCCCCACTGTACCTCAACCCCAGGGCAGATAAGTTCCTCTGTGGCCTaGCTCGGGGACAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: HSSYTPASPHCTSTPGQISSSVA*LGDSGW
Trigger: CCAGCCACTGTCCCCGAGCAAGGCCACAGAGGAACT...TATCTGCCCTGGGGTTGAGGTACAGTGGGGACTTGCAGGTGTATAGGAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 90 bp CTGTCCGCCCTGGCGAAGGTTTCTCCAGCATCCTGGTACCTGGTTTaGAGCACACACCACCAGCTTTGGTGCGCACAAAATACTCCGTGG +
Preference number: 5 (lower is better)
Translates to: LSALAKVSPASWYLV*STHHQLWCAQNTPW
Trigger: CCACGGAGTATTTTGTGCGCACCAAAGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGATGCTGGAGAAACCTTCGCCAGGGCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp ACATCTCCCAGCTCATGGAAACGCACATCCAGCAGGTCGAACTCGTaGTTGATGTTGATGGCGTTGATAACCCGCCTCGGTACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSPSSWKRTSSRSNS*LMLMALITRLGTSL
Trigger: CAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCTGGGAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp AGGGAGGGAGAGAGGCGTAGAGAGGCCTCTGTCAGTCTCCTTCTCTTGTCTCGCAACTCGTGGTTGATGTaGATGGCGTTGATAACCCGC +
Preference number: 5 (lower is better)
Translates to: REGERRREASVSLLLLSRNSWLM*MALITR
Trigger: GCGGGTTATCAACGCCATCAACATCAACCACGAGTT...GCGAGACAAGAGAAGGAGACTGACAGAGGCCTCTCTACGCCTCTCTCCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGAGGTACCAGGCGTTCCTaGGTGGGCAGGTTGGAATAC +
Preference number: 5 (lower is better)
Translates to: GITETSTDISGESPGSDGGTRRS*VGRLEY
Trigger: GTATTCCAACCTGCCCACCAAGGAACGCCTGGTACC...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp TCATGCCTGTTTGTCAGAGCAGCCACCACCTGGCAAACTACTCCAGACAGAGCTATCCTGGTACCTGGTTaGAAGCACACACCACCAGCT +
Preference number: 5 (lower is better)
Translates to: SCLFVRAATTWQTTPDRAILVPG*KHTPPA
Trigger: AGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGAT...AGCTCTGTCTGGAGTAGTTTGCCAGGTGGTGGCTGCTCTGACAAACAGGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp CACCTCTTTCCCACAGCACTCTTGGGAACAAAAATGCTGCATAGATGTCCGGGCGGAGTGACAGGGGCATaGTTCCAGAAGAAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: HLFPTALLGTKMLHRCPGGVTGA*FQKKLD
Trigger: ATCCAGCTTCTTCTGGAACAATGCCCCTGTCACTCC...GCCCGGACATCTATGCAGCATTTTTGTTCCCAAGAGTGCTGTGGGAAAGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp GGTATCACAGAAACATCCACAGACATCTCAGGAGAGAGCCCTGGCTCAGATGGATACTCGAAGGTGCCATaGGTCAGCATCTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: GITETSTDISGESPGSDGYSKVP*VSISRN
Trigger: GTTCCGAGAGATGCTGACCAATGGCACCTTCGAGTA...TCCATCTGAGCCAGGGCTCTCTCCTGAGATGTCTGTGGATGTTTCTGTGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 90 bp TTAGATTCACAGACCACGAAGGCGTCCACAACATCTCCCAGCTCATaGAAACGCACATCCAGCAGGTCGAACTCGTGGTTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: LDSQTTKASTTSPSS*KRTSSRSNSWLMLM
Trigger: CATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCTGGGAGATGTTGTGGACGCCTTCGTGGTCTGTGAATCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp ACAGAACTCTCAAATGGAGGCAGGCATATGGCAGTCCTGCTCAAAACTACATTTTCCTTGGTGGGCAGGTaGGAATACTGCACCACCGTG +
Preference number: 5 (lower is better)
Translates to: TELSNGGRHMAVLLKTTFSLVGR*EYCTTV
Trigger: CACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGA...AAATGTAGTTTTGAGCAGGACTGCCATATGCCTGCCTCCATTTGAGAGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS-3UTR CAA 90 bp AACAAGCTGGTCTTATTTGAATTGCTTGCTGGTTGCCAAGGGGCTTCTACAGCAAGGTCGAACTCGTGGTaGATGTTGATGGCGTTGATA +
Preference number: 5 (lower is better)
Translates to: NKLVLFELLAGCQGASTARSNSW*MLMALI
Trigger: TATCAACGCCATCAACATCAACCACGAGTTCGACCT...TGCTGTAGAAGCCCCTTGGCAACCAGCAAGCAATTCAAATAAGACCAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp TGCCCAGGCGCTCCCGCGTACTCAACACGTGCCTCATaGGCCTCCGAGCAGGTCCCCGGGCTGAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: CPGAPAYSTRAS*ASEQVPGLRSP
Trigger: AGGGCTCCTCAGCCCGGGGACCTGCTCGGAGGCCCATGAGGCACGTGTTGAGTACGCGGGAGCGCCTGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 72 bp CACGTGCCTCATGGGCCTCCGAGCAGGTCCCCGGGCTaGGGAGCCCTCAGACACTTCGGGCTTCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: HVPHGPPSRSPG*GALRHFGLLLC
Trigger: ACAGAGGAGAAGCCCGAAGTGTCTGAGGGCTCCTCAGCCCGGGGACCTGCTCGGAGGCCCATGAGGCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp CGGCGCAGGCGGATGCCATCCAGCCCATACACGGCCTaGAGCATGTCCATGGTGCAGCCTGACACCACCTCC +
Preference number: 6 (lower is better)
Translates to: RRRRMPSSPYTA*SMSMVQPDTTS
Trigger: GGAGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATGGCATCCGCCTGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GTTCCTTGGTGGGCAGGTTGGAATACTGCACCACCGTaGGCACCCCGCAACTGGGCCCGTGCCAGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: VPWWAGWNTAPP*APRNWARASLA
Trigger: TGCCAGGCTGGCACGGGCCCAGTTGCGGGGTGCCCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp TCCGTGGTGTCCTCCGGCAACACGAAGTCCACCCGGTaGAGTTCCTCTGTGGCCTTGCTCGGGGACAGTGGC +
Preference number: 6 (lower is better)
Translates to: SVVSSGNTKSTR*SSSVALLGDSG
Trigger: GCCACTGTCCCCGAGCAAGGCCACAGAGGAACTGCACCGGGTGGACTTCGTGTTGCCGGAGGACACCACGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp TGGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGATaGCATCCAGCCCATACACGGCCTGCAGCATGTCCA +
Preference number: 6 (lower is better)
Translates to: WAWCSTGGGAGG*HPAHTRPAACP
Trigger: TGGACATGCTGCAGGCCGTGTATGGGCTGGATGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp CAGCCCGCGAAGTGCAGGGGGCTGCCGAGAGACCACTaGACTAGGATGTGGCCGGTGCGGTTCTCATACTGC +
Preference number: 6 (lower is better)
Translates to: QPAKCRGLPRDH*TRMWPVRFSYC
Trigger: GCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCCCCCTGCACTTCGCGGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GGTTGGAATACTGCACCACCGTGGGCACCCCGCAACTaGGCCCGTGCCAGCCTGGCAGGCACACACACTCAA +
Preference number: 6 (lower is better)
Translates to: GWNTAPPWAPRN*ARASLAGTHTQ
Trigger: TTGAGTGTGTGTGCCTGCCAGGCTGGCACGGGCCCAGTTGCGGGGTGCCCACGGTGGTGCAGTATTCCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GCCTCGGTACCTCCCTGGGTACCAGGCGTTCCTTGGTaGGCAGGTTGGAATACTGCACCACCGTGGGCACCC +
Preference number: 6 (lower is better)
Translates to: ASVPPWVPGVPW*AGWNTAPPWAP
Trigger: GGGTGCCCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGAACGCCTGGTACCCAGGGAGGTACCGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp CCCGCCTCGGTACCTCCCTGGGTACCAGGCGTTCCTTaGTGGGCAGGTTGGAATACTGCACCACCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: PASVPPWVPGVP*WAGWNTAPPWA
Trigger: TGCCCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGAACGCCTGGTACCCAGGGAGGTACCGAGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GGCCGGTGCGGTTCTCATACTGCCGGAAGTTGGGCATaGTGTAGTACTGGCGGCGGCGCAGGCGGATGCCAT +
Preference number: 6 (lower is better)
Translates to: GRCGSHTAGSWA*CSTGGGAGGCH
Trigger: ATGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GGATGTGGCCGGTGCGGTTCTCATACTGCCGGAAGTTaGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: GCGRCGSHTAGS*AWCSTGGGAGG
Trigger: TCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 72 bp ACCCGCCTCGGTACCTCCCTGGGTACCAGGCGTTCCTaGGTGGGCAGGTTGGAATACTGCACCACCGTGGGC +
Preference number: 6 (lower is better)
Translates to: TRLGTSLGTRRS*VGRLEYCTTVG
Trigger: GCCCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGAACGCCTGGTACCCAGGGAGGTACCGAGGCGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp CATCCAGCCCATACACGGCCTGCAGCATGTCCATGGTaGAGCCTGACACCACCTCCAGTGTGCCCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: HPAHTRPAACPW*SLTPPPVCPAA
Trigger: AGCAGCCGGGCACACTGGAGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp TGCCATCCAGCCCATACACGGCCTGCAGCATGTCCATaGTGCAGCCTGACACCACCTCCAGTGTGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: CHPAHTRPAACP*CSLTPPPVCPA
Trigger: AGCCGGGCACACTGGAGGTGGTGTCAGGCTGCACCATGGACATGCTGCAGGCCGTGTATGGGCTGGATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp TGCAGGGGGCTGCCGAGAGACCACTGCACTAGGATGTaGCCGGTGCGGTTCTCATACTGCCGGAAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: CRGLPRDHCTRM*PVRFSYCRKLG
Trigger: GCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCCCCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp GCGTTGATAACCCGCCTCGGTACCTCCCTGGGTACCAGGCGTTCCTaGGTGGGCAGGTTGGAATACTGCACCACCGTGGGCACCCCGCAA +
Preference number: 6 (lower is better)
Translates to: ALITRLGTSLGTRRS*VGRLEYCTTVGTPQ
Trigger: TTGCGGGGTGCCCACGGTGGTGCAGTATTCCAACCTGCCCACCAAGGAACGCCTGGTACCCAGGGAGGTACCGAGGCGGGTTATCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp ATCTCGTCCGCATCGTCGATGATAAAGACGTCATCGGGCCGCAGGTaGCGCAGGCGGGAGACGCCATCCTGGGTGAGGAAGGTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: ISSASSMIKTSSGRR*RRRETPSWVRKVRR
Trigger: CCTGCGCACCTTCCTCACCCAGGATGGCGTCTCCCGCCTGCGCAACCTGCGGCCCGATGACGTCTTTATCATCGACGATGCGGACGAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp ATGTGCTCACTGGGGTCCGCAGGAGGGTACTCCTGCTaGGTTCCGTCGAACCATCCCCCAGTGCGGATCAAG +
Preference number: 6 (lower is better)
Translates to: MCSLGSAGGYSC*VPSNHPPVRIK
Trigger: CTTGATCCGCACTGGGGGATGGTTCGACGGAACGCAGCAGGAGTACCCTCCTGCGGACCCCAGTGAGCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp TACATGTGCTCACTGGGGTCCGCAGGAGGGTACTCCTaGTGCGTTCCGTCGAACCATCCCCCAGTGCGGATC +
Preference number: 6 (lower is better)
Translates to: YMCSLGSAGGYS*CVPSNHPPVRI
Trigger: GATCCGCACTGGGGGATGGTTCGACGGAACGCAGCAGGAGTACCCTCCTGCGGACCCCAGTGAGCACATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp GGCTGCCGAGAGACCACTGCACTAGGATGTGGCCGGTaGGGTTCTCATACTGCCGGAAGTTGGGCATGGTGT +
Preference number: 6 (lower is better)
Translates to: GCRETTALGCGR*GSHTAGSWAWC
Trigger: ACACCATGCCCAACTTCCGGCAGTATGAGAACCGCACCGGCCACATCCTAGTGCAGTGGTCTCTCGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp CATCTGAGCCCTGGTTCCGGCGCCCACCCTCTTCAGTaGTCTTGGGCTCCCGGTAGGGATTTTCCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: HLSPGSGAHPLQ*SWAPGRDFPAS
Trigger: ACTTGCTGGAAAATCCCTACCGGGAGCCCAAGAGCACTGAAGAGGGTGGGCGCCGGAACCAGGGCTCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 72 bp GGAAGGCGAAGGGCTCTGTCCAGCCATCGTAGAGTTTaGGGAACAGCACACCATCACGCGCAGGGATCTCGT +
Preference number: 6 (lower is better)
Translates to: GRRRALSSHRRV*GTAHHHAQGSR
Trigger: ACGAGATCCCTGCGCGTGATGGTGTGCTGTTCCTCAAACTCTACGATGGCTGGACAGAGCCCTTCGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 72 bp ACCATCCCCCAGTGCGGATCAAGCTGCGGATGTAATTaGGGTCCCTCTTGTCCTCATAGTCACCCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: TIPQCGSSCGCN*GPSCPHSHPSG
Trigger: CCCGCTGGGGTGACTATGAGGACAAGAGGGACCTCAATTACATCCGCAGCTTGATCCGCACTGGGGGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS GCA 72 bp ATGGTGCAGCCTGACACCACCTCCAGTGTGCCCGGCTaGTTCCAGAAGAAACCATACAGGGACTTCCGCATG +
Preference number: 6 (lower is better)
Translates to: MVQPDTTSSVPG*FQKKPYRDFRM
Trigger: CATGCGGAAGTCCCTGTATGGTTTCTTCTGGAAGCAGCCGGGCACACTGGAGGTGGTGTCAGGCTGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp ACACACCACCAGCTTTGGTGCGCACAAAATACTCCGTaGTGTCCTCCGGCAACACGAAGTCCACCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: THHQLWCAQNTP*CPPATRSPPGA
Trigger: TGCACCGGGTGGACTTCGTGTTGCCGGAGGACACCACGGAGTATTTTGTGCGCACCAAAGCTGGTGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp GTCATCCGCAATCCAGCCGTCCTGACGGCCACCAGGTaGGAAATGGTCCAGGAAGACATAGAGCACCTTGTG +
Preference number: 6 (lower is better)
Translates to: VIRNPAVLTATR*EMVQEDIEHLV
Trigger: CACAAGGTGCTCTATGTCTTCCTGGACCATTTCCCACCTGGTGGCCGTCAGGACGGCTGGATTGCGGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 72 bp TCCAGCAGGTCGAACTCGTGGTTGATGTTGATGGCGTaGATAACCCGCCTCGGTACCTCCCTGGGTACCAGG +
Preference number: 6 (lower is better)
Translates to: SSRSNSWLMLMA*ITRLGTSLGTR
Trigger: CCTGGTACCCAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp AAACGCACATCCAGCAGGTCGAACTCGTGGTTGATGTTGATGGCGTaGATAACCCGCCTCGGTACCTCCCTGGGTACCAGGCGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: KRTSSRSNSWLMLMA*ITRLGTSLGTRRSL
Trigger: CAAGGAACGCCTGGTACCCAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp AGCTCATGGAAACGCACATCCAGCAGGTCGAACTCGTGGTTGATGTaGATGGCGTTGATAACCCGCCTCGGTACCTCCCTGGGTACCAGG +
Preference number: 6 (lower is better)
Translates to: SSWKRTSSRSNSWLM*MALITRLGTSLGTR
Trigger: CCTGGTACCCAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp TCTCCCAGCTCATGGAAACGCACATCCAGCAGGTCGAACTCGTGGTaGATGTTGATGGCGTTGATAACCCGCCTCGGTACCTCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: SPSSWKRTSSRSNSW*MLMALITRLGTSLG
Trigger: ACCCAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp CAGACCACGAAGGCGTCCACAACATCTCCCAGCTCATaGAAACGCACATCCAGCAGGTCGAACTCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: QTTKASTTSPSS*KRTSSRSNSWL
Trigger: CAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCTGGGAGATGTTGTGGACGCCTTCGTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 90 bp TCTGTCCGCCCTGGCGAAGGTTTCTCCAGCATCCTGGTACCTGGTTaGAAGCACACACCACCAGCTTTGGTGCGCACAAAATACTCCGTG +
Preference number: 6 (lower is better)
Translates to: SVRPGEGFSSILVPG*KHTPPALVRTKYSV
Trigger: CACGGAGTATTTTGTGCGCACCAAAGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGATGCTGGAGAAACCTTCGCCAGGGCGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 72 bp AAACGCACATCCAGCAGGTCGAACTCGTGGTTGATGTaGATGGCGTTGATAACCCGCCTCGGTACCTCCCTG +
Preference number: 6 (lower is better)
Translates to: KRTSSRSNSWLM*MALITRLGTSL
Trigger: CAGGGAGGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CCA 72 bp AGCTCATGGAAACGCACATCCAGCAGGTCGAACTCGTaGTTGATGTTGATGGCGTTGATAACCCGCCTCGGT +
Preference number: 6 (lower is better)
Translates to: SSWKRTSSRSNS*LMLMALITRLG
Trigger: ACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 72 bp CCTGGCGAAGGTTTCTCCAGCATCCTGGTACCTGGTTaGAAGCACACACCACCAGCTTTGGTGCGCACAAAA +
Preference number: 6 (lower is better)
Translates to: PGEGFSSILVPG*KHTPPALVRTK
Trigger: TTTTGTGCGCACCAAAGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGATGCTGGAGAAACCTTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS CAA 72 bp TCATGGAAACGCACATCCAGCAGGTCGAACTCGTGGTaGATGTTGATGGCGTTGATAACCCGCCTCGGTACC +
Preference number: 6 (lower is better)
Translates to: SWKRTSSRSNSW*MLMALITRLGT
Trigger: GGTACCGAGGCGGGTTATCAACGCCATCAACATCAACCACGAGTTCGACCTGCTGGATGTGCGTTTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7
CDS TCA 72 bp CTGGCGAAGGTTTCTCCAGCATCCTGGTACCTGGTTTaGAGCACACACCACCAGCTTTGGTGCGCACAAAAT +
Preference number: 6 (lower is better)
Translates to: LAKVSPASWYLV*STHHQLWCAQN
Trigger: ATTTTGTGCGCACCAAAGCTGGTGGTGTGTGCTTCAAACCAGGTACCAGGATGCTGGAGAAACCTTCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044970.7