Pregenerated sensors for MGAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043998Ensembl transcript IDs: ENSMUST00000060579.10
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGAAATTTTAATCAGTCCTAACTGGAAAGGATTGCTATGTATCTaGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: FEILISPNWKGLLCI*TPFTRSLCIKAEAG Trigger: ACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATACATAGCAATCCTTTCCAGTTAGGACTGATTAAAATTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| 3UTR-3UTR GCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTCTAACTGGAAAGGATTaGTATGTATCTGGACACCTT | + |
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Preference number: 2 (lower is better) Translates to: VKLGLSQKYSSDFIVILFLTGKD*YVSGHL Trigger: AAGGTGTCCAGATACATAGCAATCCTTTCCAGTTAG...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTGGATTGCTATGTATCTaGACACCTTTTACAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: VKLGLSQKYSSDFIVILFGLLCI*TPFTRS Trigger: ACTTCTTGTAAAAGGTGTCCAGATACATAGCAATCC...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTCACCCAGGACACTCCTaGTGCTTCAGTTTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPHPGHS*CFSFHI Trigger: GATGTGGAAACTGAAGCAGCAGGAGTGTCCTGGGTG...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTGGCCTGTTATGCACCTaGACCACCAGCACCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VKLGLSQKYSSDFIVILFGLLCT*TTSTSS Trigger: GGAGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCC...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTGAATACCCTGGGCTTTaGGAAGCGAGTCTATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPEYPGL*EASLSA Trigger: TGCTGATAGACTCGCTTCGCAAAGCCCAGGGTATTC...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTCAGACTGTTGATCTCTaGGGACCAGAAGTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPQTVDL*GPEVMA Trigger: AGCCATGACTTCTGGTCCGCAGAGATCAACAGTCTG...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTGGTACAGCTGAATGCTaGACGGAAAGAACACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPGTAEC*TERTLA Trigger: TGCAAGTGTTCTTTCCGTTCAGCATTCAGCTGTACC...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTTTGAGACCCTGCGGATaGCTACGGACACAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VKLGLSQKYSSDFIVILFLRPCG*LRTQQG Trigger: ACCTTGCTGTGTCCGTAGGCATCCGCAGGGTCTCAA...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTTATTCCGGCCTGTTATaGACCTGGACCACCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: VKLGLSQKYSSDFIVILFYSGLL*TWTTST Trigger: GGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATA...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTAACGGAAAGAACACTTaGAGAACCGGGCAGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPNGKNT*RTGQKS Trigger: GGATTTCTGCCCGGTTCTGCAAGTGTTCTTTCCGTT...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTGCTAGCCCCATGTTGTaGTCTGTCGATTTCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPASPML*SVDFQV Trigger: AACTTGGAAATCGACAGAGCACAACATGGGGCTAGC...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTATGGTGTTTGGTTTGTaGGAACTTGGCCTCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPMVFGL*ELGLSV Trigger: TACAGAGAGGCCAAGTTCTCACAAACCAAACACCAT...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTAAAATCCTAGGAGCCTaGGGAACTAAGACTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPKILGA*GTKTFQ Trigger: CTGGAAAGTCTTAGTTCCTCAGGCTCCTAGGATTTT...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGTCCTTTGTCGCCCATTaGTACTCCAGAGGACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLSFVAH*YSRGRS Trigger: GCTTCGTCCTCTGGAGTAGCAATGGGCGACAAAGGA...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | CCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTATACCTTTATTATGACTAGGACTTCCTaGATACCCTGGGCTTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: PFTRSLCIKAEAGSYTFIMTRTS*IPWALR Trigger: TCGCAAAGCCCAGGGTATTCAGGAAGTCCTAGTCAT...AATAAAGGTATAGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGTGGAGATCAGACTGTTaGTCTCTGCGGACCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLWRSDC*SLRTRS Trigger: ACTTCTGGTCCGCAGAGATCAACAGTCTGATCTCCA...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR TCA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTCTACATGTTTTCTTGTaGTGCATACCACAGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPLHVFL*CIPQSP Trigger: TGGAGACTGTGGTATGCATCACAAGAAAACATGTAG...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | CCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTATACCTTTATTAGGTGGGGAAATGGCTaGCATAGGAAACTTCTCACC | + |
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Preference number: 4 (lower is better) Translates to: PFTRSLCIKAEAGSYTFIRWGNG*HRKLLT Trigger: GGTGAGAAGTTTCCTATGGCAGCCATTTCCCCACCT...AATAAAGGTATAGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGGGCACTCTGGGTGGATaGCCTACATGTTTTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLGTLGG*PTCFLV Trigger: CACAAGAAAACATGTAGGCCATCCACCCAGAGTGCC...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTCCAGGACACTCCTGCTaGTTCAGTTTCCACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: VKLGLSQKYSSDFIVILFPGHSC*FSFHIF Trigger: AAAGATGTGGAAACTGAAGCAGCAGGAGTGTCCTGG...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGGCGGACCAGAAGTCATaGCTAAAGATGACTAGGACT | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLADQKS*LKMTRT Trigger: AGTCCTAGTCATCTTTAGCCATGACTTCTGGTCCGC...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR GCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGCTTTCCCATACAAAATaGAGCTTCCACCACCAATGG | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLLSHTK*SFHHQW Trigger: CCATTGGTGGTGGAAGCTGCATTTTGTATGGGAAAG...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CCA 90 bp | CCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTATACCTTTATTACCACCAATGGTGTTTaGTTTGTGAGAACTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PFTRSLCIKAEAGSYTFITTNGV*FVRTWP Trigger: AGGCCAAGTTCTCACAAACCAAACACCATTGGTGGT...AATAAAGGTATAGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CCA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGAGCTTCCACCACCAATaGTGTTTGGTTTGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ENDSSDRMLNKLKTSELLSFHHQ*CLVCEN Trigger: GTTCTCACAAACCAAACACCATTGGTGGTGGAAGCT...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 90 bp | GCCGATTCGTTTGAGACCCTGCGGATGCCTACGGACACAGCAAGGTaGCCCGCACCCCGTACGGGCTCCGCGTCCAGCAGCGGCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ADSFETLRMPTDTAR*PAPRTGSASSSGGP Trigger: TGGCCCGCCGCTGCTGGACGCGGAGCCCGTACGGGGTGCGGGCCACCTTGCTGTGTCCGTAGGCATCCGCAGGGTCTCAAACGAATCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 90 bp | CCGCGGGAACCAGAGGAGCGGCCGATTCGTTTGAGACCCTGCGGATaGCTACGGACACAGCAAGGTGGCCCGCACCCCGTACGGGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: PREPEERPIRLRPCG*LRTQQGGPHPVRAP Trigger: CGGAGCCCGTACGGGGTGCGGGCCACCTTGCTGTGTCCGTAGGCATCCGCAGGGTCTCAAACGAATCGGCCGCTCCTCTGGTTCCCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 90 bp | TTGCGAAGCGAGTCTATCAGCAACCTGAGGTATTCCGGCCTGTTATaGACCTGGACCACCAGCACCAGCTCCCCGGGGCTCCAGGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: LRSESISNLRYSGLL*TWTTSTSSPGLQVP Trigger: CGGCACCTGGAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATACCTCAGGTTGCTGATAGACTCGCTTCGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS TCA 90 bp | TCCCCGGGGCTCCAGGTGCCGTCATTACCGACGTTCCTCAGCATCTaGTCGAAGTTCAACTGGTACACCAGGGACCGGTACCGCAGCGTT | + |
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Preference number: 5 (lower is better) Translates to: SPGLQVPSLPTFLSI*SKFNWYTRDRYRSV Trigger: AACGCTGCGGTACCGGTCCCTGGTGTACCAGTTGAACTTCGATCAGATGCTGAGGAACGTCGGTAATGACGGCACCTGGAGCCCCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 90 bp | AGCGAGTCTATCAGCAACCTGAGGTATTCCGGCCTGTTATGCACCTaGACCACCAGCACCAGCTCCCCGGGGCTCCAGGTGCCGTCATTA | + |
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Preference number: 5 (lower is better) Translates to: SESISNLRYSGLLCT*TTSTSSPGLQVPSL Trigger: TAATGACGGCACCTGGAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATACCTCAGGTTGCTGATAGACTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 90 bp | TGTTATGCACCTGGACCACCAGCACCAGCTCCCCGGGGCTCCAGGTaGCGTCATTACCGACGTTCCTCAGCATCTGATCGAAGTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: CYAPGPPAPAPRGSR*RHYRRSSASDRSST Trigger: AGTTGAACTTCGATCAGATGCTGAGGAACGTCGGTAATGACGGCACCTGGAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGGTGCATAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS TCA 90 bp | CTTCCTGAATACCCTGGGCTTTGCGAAGCGAGTCTATCAGCAACCTaGGGTATTCCGGCCTGTTATGCACCTGGACCACCAGCACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LPEYPGLCEASLSAT*GIPACYAPGPPAPA Trigger: AGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATACCTCAGGTTGCTGATAGACTCGCTTCGCAAAGCCCAGGGTATTCAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS TCA 90 bp | ATCTCTGCGGACCAGAAGTCATGGCTAAAGATGACTAGGACTTCCTaGATACCCTGGGCTTTGCGAAGCGAGTCTATCAGCAACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ISADQKSWLKMTRTS*IPWALRSESISNLR Trigger: CCTCAGGTTGCTGATAGACTCGCTTCGCAAAGCCCAGGGTATTCAGGAAGTCCTAGTCATCTTTAGCCATGACTTCTGGTCCGCAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTGAGCGGCCGATTCGTTaGAGACCCTGCGGATGCCTA | + |
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Preference number: 5 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPERPIR*RPCGCL Trigger: TAGGCATCCGCAGGGTCTCAAACGAATCGGCCGCTC...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGTACCGCAGCGTTAGGTaGTCCACCTCCGGCCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ENDSSDRMLNKLKTSELLYRSVR*STSGRG Trigger: CCCGCGGCCGGAGGTGGACAACCTAACGCTGCGGTA...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTGGCGTCGCTCTTCCTTaGTCGCCCATTGCTACTCCA | + |
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Preference number: 5 (lower is better) Translates to: VKLGLSQKYSSDFIVILFGVALP*SPIATP Trigger: TGGAGTAGCAATGGGCGACAAAGGAAGAGCGACGCC...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTTTCCTTTGTCGCCCATaGCTACTCCAGAGGACGAAG | + |
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Preference number: 5 (lower is better) Translates to: VKLGLSQKYSSDFIVILFFLCRP*LLQRTK Trigger: CTTCGTCCTCTGGAGTAGCAATGGGCGACAAAGGAA...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGGGTCTGTCCCAGAAATACTCTAGTGATTTCATTGTAATACTTTTTGAACGGAAAGAACACTaGCAGAACCGGGCAGAAATC | + |
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Preference number: 5 (lower is better) Translates to: VKLGLSQKYSSDFIVILFERKEH*QNRAEI Trigger: GATTTCTGCCCGGTTCTGCAAGTGTTCTTTCCGTTC...AAAAAGTATTACAATGAAATCACTAGAGTATTTCTGGGACAGACCCAGTTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GAAAATGACTCTTCCGACAGGATGCTTAACAAACTTAAAACTTCTGAGTTATTGTCAGGGTATTCGGCATaGATGCACCCCAACTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: ENDSSDRMLNKLKTSELLSGYSA*MHPNFR Trigger: TCTGAAGTTGGGGTGCATCAATGCCGAATACCCTGA...CAATAACTCAGAAGTTTTAAGTTTGTTAAGCATCCTGTCGGAAGAGTCATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | CCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTATACCTTTATTCACCACCAATGGTGTTaGGTTTGTGAGAACTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PFTRSLCIKAEAGSYTFIHHQWC*VCENLA Trigger: GGCCAAGTTCTCACAAACCAAACACCATTGGTGGTG...AATAAAGGTATAGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS-3UTR CAA 90 bp | GTATCTGGACACCTTTTACAAGAAGTTTATGTATTAAAGCAGAGGCCGGTTCCTAAGGCCAGTGTAATCTaGAAGAACTTTGACTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VSGHLLQEVYVLKQRPVPKASVI*KNFDSF Trigger: GAAAGAGTCAAAGTTCTTCAAGATTACACTGGCCTT...AGGAACCGGCCTCTGCTTTAATACATAAACTTCTTGTAAAAGGTGTCCAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CAA 90 bp | GGGCTCCGCGTCCAGCAGCGGCGGGCCAAGGGCGTCGCTCTTCCTTaGTCGCCCATTGCTACTCCAGAGGACGAAGCCGCAGGCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GLRVQQRRAKGVALP*SPIATPEDEAAGGH Trigger: GTGGCCGCCTGCGGCTTCGTCCTCTGGAGTAGCAATGGGCGACAAAGGAAGAGCGACGCCCTTGGCCCGCCGCTGCTGGACGCGGAGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CAA 72 bp | AACTGGTACACCAGGGACCGGTACCGCAGCGTTAGGTaGTCCACCTCCGGCCGCGGGACCGCGGGAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: NWYTRDRYRSVR*STSGRGTAGTR Trigger: TCTGGTTCCCGCGGTCCCGCGGCCGGAGGTGGACAACCTAACGCTGCGGTACCGGTCCCTGGTGTACCAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 72 bp | CGGGAACCAGAGGAGCGGCCGATTCGTTTGAGACCCTaGGGATGCCTACGGACACAGCAAGGTGGCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: REPEERPIRLRP*GCLRTQQGGPH Trigger: GTGCGGGCCACCTTGCTGTGTCCGTAGGCATCCGCAGGGTCTCAAACGAATCGGCCGCTCCTCTGGTTCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 72 bp | CCTGGACCACCAGCACCAGCTCCCCGGGGCTCCAGGTaGCGTCATTACCGACGTTCCTCAGCATCTGATCGA | + |
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Preference number: 6 (lower is better) Translates to: PGPPAPAPRGSR*RHYRRSSASDR Trigger: TCGATCAGATGCTGAGGAACGTCGGTAATGACGGCACCTGGAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 72 bp | ATCAGCAACCTGAGGTATTCCGGCCTGTTATGCACCTaGACCACCAGCACCAGCTCCCCGGGGCTCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ISNLRYSGLLCT*TTSTSSPGLQV Trigger: CACCTGGAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATACCTCAGGTTGCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS GCA 72 bp | GAGTCTATCAGCAACCTGAGGTATTCCGGCCTGTTATaGACCTGGACCACCAGCACCAGCTCCCCGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ESISNLRYSGLL*TWTTSTSSPGL Trigger: GAGCCCCGGGGAGCTGGTGCTGGTGGTCCAGGTGCATAACAGGCCGGAATACCTCAGGTTGCTGATAGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS TCA 72 bp | CTCCAGGTGCCGTCATTACCGACGTTCCTCAGCATCTaGTCGAAGTTCAACTGGTACACCAGGGACCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LQVPSLPTFLSI*SKFNWYTRDRY Trigger: GTACCGGTCCCTGGTGTACCAGTTGAACTTCGATCAGATGCTGAGGAACGTCGGTAATGACGGCACCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 72 bp | CTACTTTGTCAGCAATGCCATAGAAACTCCGAATGGTaGTGTAGGTCCCTAGAGAGAGGACGTCACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLCQQCHRNSEW*CRSLERGRHTQ Trigger: CTGGGTGTGACGTCCTCTCTCTAGGGACCTACACCACCATTCGGAGTTTCTATGGCATTGCTGACAAAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CAA 72 bp | ATTCGGGTACAGCTGAATGCTGAACGGAAAGAACACTaGCAGAACCGGGCAGAAATCCACCCTGGAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: IRVQLNAERKEH*QNRAEIHPGDQ Trigger: CTGATCTCCAGGGTGGATTTCTGCCCGGTTCTGCAAGTGTTCTTTCCGTTCAGCATTCAGCTGTACCCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CAA 90 bp | AACACTTGCAGAACCGGGCAGAAATCCACCCTGGAGATCAGACTGTaGATCTCTGCGGACCAGAAGTCATGGCTAAAGATGACTAGGACT | + |
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Preference number: 6 (lower is better) Translates to: NTCRTGQKSTLEIRL*ISADQKSWLKMTRT Trigger: AGTCCTAGTCATCTTTAGCCATGACTTCTGGTCCGCAGAGATCAACAGTCTGATCTCCAGGGTGGATTTCTGCCCGGTTCTGCAAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 72 bp | GCTTCCACCACCAATGGTGTTTGGTTTGTGAGAACTTaGCCTCTCTGTAATGGCCGAAGGAGTCAGGGTATT | + |
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Preference number: 6 (lower is better) Translates to: ASTTNGVWFVRT*PLCNGRRSQGI Trigger: AATACCCTGACTCCTTCGGCCATTACAGAGAGGCCAAGTTCTCACAAACCAAACACCATTGGTGGTGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CCA 72 bp | CATCTACTTTGTCAGCAATGCCATAGAAACTCCGAATaGTGGTGTAGGTCCCTAGAGAGAGGACGTCACACC | + |
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Preference number: 6 (lower is better) Translates to: HLLCQQCHRNSE*WCRSLERGRHT Trigger: GGTGTGACGTCCTCTCTCTAGGGACCTACACCACCATTCGGAGTTTCTATGGCATTGCTGACAAAGTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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| CDS CAA 90 bp | GGAAACTTCTCACCGATAACTAGAGTTTCCGGAAACAGGTATTGTTaGTTGCTATTTAATAATGACTCAATTTGGGCACTCTGGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: GNFSPITRVSGNRYC*LLFNNDSIWALWVD Trigger: ATCCACCCAGAGTGCCCAAATTGAGTCATTATTAAATAGCAACAAACAATACCTGTTTCCGGAAACTCTAGTTATCGGTGAGAAGTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060579.10 |
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