Pregenerated sensors for MFSD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041945Ensembl transcript IDs: ENSMUST00000039672.6, ENSMUST00000131390.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGAGAGAAGAGGGGCAAGGATGCGGCCCACCGCAGTCACGGACTaGCCCACACCTATGACGGTGCCGCTGGCCTGGGCTCCACCCACA | + |
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Preference number: 1 (lower is better) Translates to: PERRGARMRPTAVTD*PTPMTVPLAWAPPT Trigger: TGTGGGTGGAGCCCAGGCCAGCGGCACCGTCATAGGTGTGGGCCAGTCCGTGACTGCGGTGGGCCGCATCCTTGCCCCTCTTCTCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR TCA 90 bp | GCTAAAGCAGCACCCAGGCTTGGGGGTCCACAGGGACTGATCTCCTaGGCCACTCCAGAGAGAAGAGGGGCAAGGATGCGGCCCACCGCA | + |
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Preference number: 1 (lower is better) Translates to: AKAAPRLGGPQGLIS*ATPERRGARMRPTA Trigger: TGCGGTGGGCCGCATCCTTGCCCCTCTTCTCTCTGGAGTGGCTCAGGAGATCAGTCCCTGTGGACCCCCAAGCCTGGGTGCTGCTTTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR TCA 90 bp | CTACCAGGGCTAAAGCAGCACCCAGGCTTGGGGGTCCACAGGGACTaGTCTCCTGAGCCACTCCAGAGAGAAGAGGGGCAAGGATGCGGC | + |
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Preference number: 1 (lower is better) Translates to: LPGLKQHPGLGVHRD*SPEPLQREEGQGCG Trigger: GCCGCATCCTTGCCCCTCTTCTCTCTGGAGTGGCTCAGGAGATCAGTCCCTGTGGACCCCCAAGCCTGGGTGCTGCTTTAGCCCTGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR CCA 90 bp | ACACCTATGACGGTGCCGCTGGCCTGGGCTCCACCCACACTCAGCTaGAGGTCCGTGATGCAGGTTCTCCCAATGGTGGTGGAGAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: TPMTVPLAWAPPTLS*RSVMQVLPMVVEKD Trigger: GTCCTTCTCCACCACCATTGGGAGAACCTGCATCACGGACCTCCAGCTGAGTGTGGGTGGAGCCCAGGCCAGCGGCACCGTCATAGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR CCA 90 bp | CAATGGTGGTGGAGAAGGACAGAAGCGTCGAGGAGAAGACCACCATaGCCATGGAGCAGGTCGTGGAGTAGACCACCAGCAGCAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: QWWWRRTEASRRRPP*PWSRSWSRPPAADR Trigger: CCTGTCTGCTGCTGGTGGTCTACTCCACGACCTGCTCCATGGCCATGGTGGTCTTCTCCTCGACGCTTCTGTCCTTCTCCACCACCATTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR GCA 90 bp | CAGGTTCTTCATGTCTTTCAAGGCCAACATGACTTCAACCCAGGGTaGCTGCACTGTCCTCTCACTCCTCCTGGCCGTAGAGGTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: QVLHVFQGQHDFNPG*LHCPLTPPGRRGGG Trigger: GCCACCACCTCTACGGCCAGGAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTCATGTTGGCCTTGAAAGACATGAAGAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR GCA 90 bp | TTCTTCATGTCTTTCAAGGCCAACATGACTTCAACCCAGGGTGCCTaGACTGTCCTCTCACTCCTCCTGGCCGTAGAGGTGGTGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: FFMSFKANMTSTQGA*TVLSLLLAVEVVAA Trigger: AGCAGCCACCACCTCTACGGCCAGGAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTCATGTTGGCCTTGAAAGACATGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR TCA 90 bp | ACACAGGGCAGCGCTATGCTCAGTCTAAACTTCCCTATCTGCGGCTaGCTTCTGATGGGTCTGCTGGCATGCCTGTGCAAACAAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: TQGSAMLSLNFPICG*LLMGLLACLCKQGP Trigger: TGGTCCTTGTTTGCACAGGCATGCCAGCAGACCCATCAGAAGTCAGCCGCAGATAGGGAAGTTTAGACTGAGCATAGCGCTGCCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR CCA 90 bp | TGCTGCCTTTCCCTAAGAGCAAATGTTAACTCTACTGTGCCCAGGTaGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACAGGGCAGCGC | + |
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Preference number: 1 (lower is better) Translates to: CCLSLRANVNSTVPR*EEKPLRQASDTGQR Trigger: GCGCTGCCCTGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTCTTAGGGAAAGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR TCA 90 bp | CCTACTATTCCAGCCACTACGGGACTTGCTCCGAGGGATCTGACATaGAGATTCAGCAATGGGACCACCATGCTGACACCAAACAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PTIPATTGLAPRDLT*RFSNGTTMLTPNRS Trigger: GGACCTGTTTGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGTCCCGTAGTGGCTGGAATAGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR CCA 90 bp | GCAGATGCATCGGTTGGTCTCTGGGATTTGGGCAGAGAAACTTCTTaGCTTCTGGTATTATGGGGAGGTGCATTCCAGATAGGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: ADASVGLWDLGRETS*LLVLWGGAFQIGDQ Trigger: CTGGTCACCTATCTGGAATGCACCTCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAACCGATGCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR TCA 90 bp | AATAACTACACTTGGACCACCCACTGTCTCTCAAGTGCCCATCTTTaGCCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: NNYTWTTHCLSSAHL*PGVTWFYICFSKWS Trigger: GGACCACTTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAGAGACAGTGGGTGGTCCAAGTGTAGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR CCA 90 bp | CACTACGGGACTTGCTCCGAGGGATCTGACATGAAGATTCAGCAATaGGACCACCATGCTGACACCAAACAGGTCCTTAACTTCCAATCT | + |
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Preference number: 1 (lower is better) Translates to: HYGTCSEGSDMKIQQ*DHHADTKQVLNFQS Trigger: AGATTGGAAGTTAAGGACCTGTTTGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGTCCCGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGTCCGTGATGCAGGTTCTCCCAATGGTGGTGGAGAAGGACAGAAGCGTCCCACAGGGCCCAAGATaGAGCCTACGCCTGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: WRSVMQVLPMVVEKDRSVPQGPR*SLRLRL Trigger: CAGCCTCAGGCGTAGGCTTCATCTTGGGCCCTGTGG...GACGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCTGCATCACGGACCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGAGCAGGTCGTGGAGTAGACCACCAGCAGCAGACAGGTGAGAACGCTGGATCAAGTGCCCATCTTTaGCCCGGAGTTACCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: HGAGRGVDHQQQTGENAGSSAHL*PGVTWF Trigger: GAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGA...TCCAGCGTTCTCACCTGTCTGCTGCTGGTGGTCTACTCCACGACCTGCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGTCCGTGATGCAGGTTCTCCCAATGGTGGTGGAGAAGGACAGAAGCGTCTTCCCTATCTGCGGCTaGCTTCTGATGGGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WRSVMQVLPMVVEKDRSVFPICG*LLMGLL Trigger: CAGCAGACCCATCAGAAGTCAGCCGCAGATAGGGAA...GACGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCTGCATCACGGACCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGCAGGTCGTGGAGTAGACCACCAGCAGCAGACAGGTGAGAACGCTGGATGTACAGCCGTAGAATaGGTCCCACAGCAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HGAGRGVDHQQQTGENAGCTAVE*VPQQSQ Trigger: CTGGCTTTGCTGTGGGACCCATTCTACGGCTGTACA...TCCAGCGTTCTCACCTGTCTGCTGCTGGTGGTCTACTCCACGACCTGCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGTTCTCCCAATGGTGGTGGAGAAGGACAGAAGCGTCGAGGAGAAGACCAGTCGCTCCTTCTCTGTaGCCAGGTCAGAAAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CRFSQWWWRRTEASRRRPVAPSL*PGQKAV Trigger: CACTGCTTTCTGACCTGGTCACAGAGAAGGAGCGAC...TGGTCTTCTCCTCGACGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTTGGGCCGTACCTCAAACCGCTCCTCCAGGGCCAAGACAAAGTTACTGTAGACTAGACCAGCATTaGGGAGGAAGACAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WSWAVPQTAPPGPRQSYCRLDQH*GGRQSS Trigger: GCTGCTCTGTCTTCCTCCTCAATGCTGGTCTAGTCT...ACAGTAACTTTGTCTTGGCCCTGGAGGAGCGGTTTGAGGTACGGCCCAAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGTCAACCCAGGGTGCCTaGACTGTCCTCTCACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: EQMLTLLCPGGKRSLSGKSTQGA*TVLSLL Trigger: GAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGA...CTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGCTGCTGGCATGCCTGTaGAAACAAGGACCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: MLTLLCPGGKRSLSGKLLLLACL*KQGPGS Trigger: TGAGCCTGGTCCTTGTTTGCACAGGCATGCCAGCAG...CAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAGTCATGATTAAAATAGCTACCAGGGCTAAAGCAGCACCCAGGCTTGGGCAAAGCCAGCCAGGGTaGCCAGCGCACTGGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: FRVMIKIATRAKAAPRLGQSQPG*PAHWCS Trigger: GCTACACCAGTGCGCTGGGCACCCTGGCTGGCTTTG...CCCAAGCCTGGGTGCTGCTTTAGCCCTGGTAGCTATTTTAATCATGACTCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGTTCTCCCAATGGTGGTaGAGAAGGACAGAAGCGTCG | + |
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Preference number: 2 (lower is better) Translates to: QISYTLLKVTLSRNMLGLFSQWW*RRTEAS Trigger: CGACGCTTCTGTCCTTCTCCACCACCATTGGGAGAA...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAATACTGTAGTACAGCATaGCGGCCACGCCCATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQYCSTA*RPRPSA Trigger: TGCTGATGGGCGTGGCCGTCATGCTGTACTACAGTA...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAAAACACCCACGGGGACTCTAGCCAGCGTAAACAGGAACACATTGGTGGACTCTACTGTGCCCAGGTaGGAAGAGAAGCCTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKTPTGTLASVNRNTLVDSTVPR*EEKPLR Trigger: CCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGA...GTCCACCAATGTGTTCCTGTTTACGCTGGCTAGAGTCCCCGTGGGTGTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGACATGGCACTGGTGCCATGCTTTGGTCCTTTAAGAGTTCTTAGCGCCTGTAGCAGATGCATCGGTTaGTCTCTGGGATTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EDMALVPCFGPLRVLSACSRCIG*SLGFGQ Trigger: CTGCCCAAATCCCAGAGACCAACCGATGCATCTGCT...ACAGGCGCTAAGAACTCTTAAAGGACCAAAGCATGGCACCAGTGCCATGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGAGCAGATGCATCGGTTaGTCTCTGGGATTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EQMLTLLCPGGKRSLSGKSRCIG*SLGFGQ Trigger: CTGCCCAAATCCCAGAGACCAACCGATGCATCTGCT...CTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | TACCTGGTTCTACATCTGCTTCTCCAAGTGGTCCCAATCCTACTCCTGTTTGAGAGGAGAAGACCACCATaGCCATGGAGCAGGTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: YLVLHLLLQVVPILLLFERRRPP*PWSRSW Trigger: CCACGACCTGCTCCATGGCCATGGTGGTCTTCTCCT...CTCAAACAGGAGTAGGATTGGGACCACTTGGAGAAGCAGATGTAGAACCAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAACGAGGTCTGTGTATCTaGATGTCAGGGGATAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQRGLCI*MSGDKG Trigger: GCCCTTATCCCCTGACATTCAGATACACAGACCTCG...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCTGAGGCTCATCTCCGTGACATTCAGATGCTGTGTGAGGACATGGCACTGGATTTTCTGTCTGTaGTCCCAAAAGGTGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: VSLRLISVTFRCCVRTWHWIFCL*SQKVGL Trigger: GAGTCCCACCTTTTGGGATCACAGACAGAAAATCCA...GTGCCATGTCCTCACACAGCATCTGAATGTCACGGAGATGAGCCTCAGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCTCTCTGAGGCTCATCTCCGTGACATTCAGATGCTGTGTGAGGACATGGGCATCGGTTGGTCTCTaGGATTTGGGCAGAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: TVSLRLISVTFRCCVRTWASVGL*DLGRET Trigger: AGTTTCTCTGCCCAAATCCCAGAGACCAACCGATGC...CCATGTCCTCACACAGCATCTGAATGTCACGGAGATGAGCCTCAGAGAGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAAGGTTCTCCCAATGGTaGTGGAGAAGGACAGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQRFSQW*WRRTEA Trigger: CGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCT...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTGTGCACTCTGACTCCTaGGAGGAGGGGAAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LIQGNKSFSRYWWIWVVSVHSDS*EEGKVV Trigger: CACCACCTTCCCCTCCTCTCAGGAGTCAGAGTGCAC...ACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTCTCTGAGGCTCATCTCCGTGACATTCAGATGCTGTGTGAGGACATGGAAAGCCCAAAGTGACTaGGTCCCAAAGAGGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TVSLRLISVTFRCCVRTWKAQSD*VPKRRE Trigger: TTCTCTCCTCTTTGGGACTCAGTCACTTTGGGCTTT...CCATGTCCTCACACAGCATCTGAATGTCACGGAGATGAGCCTCAGAGAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGTGGATTTTCTGTCTGTaGTCCCAAAAGGTGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: EQMLTLLCPGGKRSLSGKWIFCL*SQKVGL Trigger: GAGTCCCACCTTTTGGGATCACAGACAGAAAATCCA...CTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGGTGCTGGAGAAGAGTTGCAAAACGCCGTATGAGGAGCCTACTATTCCACCGAGGGATCTGACATaGAGATTCAGCAATGGGACC | + |
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Preference number: 2 (lower is better) Translates to: TKVLEKSCKTPYEEPTIPPRDLT*RFSNGT Trigger: GGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGG...TGGAATAGTAGGCTCCTCATACGGCGTTTTGCAACTCTTCTCCAGCACCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCATTCAAGTTATACTTCCACGCCTGAGGCTGTGTTaGACTGTCCCAGGACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: IGFLTAREERDGIQVILPRLRLC*TVPGQV Trigger: CACTTGTCCTGGGACAGTTCAACACAGCCTCAGGCG...TGGAAGTATAACTTGAATGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAGTCATGATTAAAATAGCTACCAGGGCTAAAGCAGCACCCAGGCTTGGGCTGCTGGCATGCCTGTaGAAACAAGGACCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FRVMIKIATRAKAAPRLGLLACL*KQGPGS Trigger: TGAGCCTGGTCCTTGTTTGCACAGGCATGCCAGCAG...CCCAAGCCTGGGTGCTGCTTTAGCCCTGGTAGCTATTTTAATCATGACTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGATGGCACTGGTGCCATaGTTTGGTCCTTTAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: QISYTLLKVTLSRNMLGLMALVP*FGPLRV Trigger: AACTCTTAAAGGACCAAAGCATGGCACCAGTGCCAT...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTACGGTGCCGCTGGCCTaGGCTCCACCCACACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GSGLSVSPRVLSILKSKFTVPLA*APPTLS Trigger: GCTGAGTGTGGGTGGAGCCCAGGCCAGCGGCACCGT...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCATTCAAGTTATACTTCCAGACTTCAACCCAGGGTaGCTGCACTGTCCTCTCACT | + |
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Preference number: 2 (lower is better) Translates to: IGFLTAREERDGIQVILPDFNPG*LHCPLT Trigger: AGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTC...TGGAAGTATAACTTGAATGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGACATGTGTGTTAGGTTaGAAATGGGCATCACACACT | + |
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Preference number: 2 (lower is better) Translates to: EQMLTLLCPGGKRSLSGKTCVLG*KWASHT Trigger: AGTGTGTGATGCCCATTTTCAACCTAACACACATGT...CTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTATCTCCCCATCAGCAAACGCATaGGGAATACATCCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: QGNKSFSRYWWIWVVSISPSANA*GIHPTE Trigger: CTCTGTGGGATGTATTCCTCATGCGTTTGCTGATGG...GGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
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| 3UTR CAA 90 bp | TACCAGGGTTTAAATAAAGCAGATGCATCGGTTGGTCTCTGGGATTaGGGCAGAGAAACTTCTTGGCTTCTGGTATTATGGGGAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: YQGLNKADASVGLWD*GRETSWLLVLWGGA Trigger: TGCACCTCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAACCGATGCATCTGCTTTATTTAAACCCTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTACCTCTTTTAGCATGCTGCCTTTCCCTAAGAGCAAATGTTAACTCTACTTCAAGTGCCCATCTTTaGCCCGGAGTTACCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLPLLACCLSLRANVNSTSSAHL*PGVTWF Trigger: GAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGA...AGTAGAGTTAACATTTGCTCTTAGGGAAAGGCAGCATGCTAAAAGAGGTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTATCTCCAAAGCCCAAAGTGACTaGGTCCCAAAGAGGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QGNKSFSRYWWIWVVSISKAQSD*VPKRRE Trigger: TTCTCTCCTCTTTGGGACTCAGTCACTTTGGGCTTT...GGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTGTGTAAGCAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGTTAACTCTACTGTaGCCAGGTGGGAAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLCKQISYTLLKVTLSRNMLTLL*PGGKRS Trigger: GCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACAT...ATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTGCTTACACAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAACCTCTTTTAGCATGCTaGCTTTCCCTAAGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQPLLAC*LSLRAN Trigger: ATTTGCTCTTAGGGAAAGGCAGCATGCTAAAAGAGG...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTATCTCCTTGGTCTCTGGGATTTaGGCAGAGAAACTTCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QGNKSFSRYWWIWVVSISLVSGI*AEKLLG Trigger: GCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAA...GGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCACACACTTAAGAAACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTGTTCCTGGTGCACTCTaGCTCCTGAGAGGAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HHTLKKQSRGLYGMWIFCVPGAL*LLRGGE Trigger: TTCCCCTCCTCTCAGGAGTCAGAGTGCACCAGGAAC...ACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTTTCTTAAGTGTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTGTTCCTGGTGCACTCTaGCTCCTGAGAGGAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSGLSVSPRVLSILKSKFVPGAL*LLRGGE Trigger: TTCCCCTCCTCTCAGGAGTCAGAGTGCACCAGGAAC...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCACACACTTAAGAAACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTTCAGCTGGAGGTCCGTaGTGCAGGTTCTCCCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: HHTLKKQSRGLYGMWIFCSAGGP*CRFSQW Trigger: CCATTGGGAGAACCTGCATCACGGACCTCCAGCTGA...ACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTTTCTTAAGTGTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTCTGTGATCCCAAAAGGCCACTGTCTCTCAAGTaGCCATCTTTGACCCGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NSQEDYTECGFSVCDPKRPLSLK*PSLTRS Trigger: ACTCCGGGTCAAAGATGGGCACTTGAGAGACAGTGG...CCTTTTGGGATCACAGACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTGGTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCCATTGTCTGGGATGTTaGGGCTTGTTTCTCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ALVETLLKAYFMTSYHQSHCLGC*GLFLSK Trigger: CTTGGAGAGAAACAAGCCTCAACATCCCAGACAATG...GGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTACCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTATCTCCCCTCTTTTAGCATGCTaGCTTTCCCTAAGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: QGNKSFSRYWWIWVVSISPLLAC*LSLRAN Trigger: ATTTGCTCTTAGGGAAAGGCAGCATGCTAAAAGAGG...GGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTCTGTGATCCCAAAAGGATGGGTTCTGTGGTGTaGTTCCCATCCAAGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NSQEDYTECGFSVCDPKRMGSVV*FPSKLQ Trigger: TTGGAGCTTGGATGGGAAGCACACCACAGAACCCAT...CCTTTTGGGATCACAGACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAACAAATTCCCAAAGCCACTAATACAGGGTAACAAGTCTTTCTCTAGATACTTCCCTATCTGCGGCTaGCTTCTGATGGGTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: INKFPKPLIQGNKSFSRYFPICG*LLMGLL Trigger: CAGCAGACCCATCAGAAGTCAGCCGCAGATAGGGAA...GTATCTAGAGAAAGACTTGTTACCCTGTATTAGTGGCTTTGGGAATTTGTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAACAAATTCCCAAAGCCACTAATACAGGGTAACAAGTCTTTCTCTAGATACGATGAAGCCTACGCCTaGGGCTGTGTTGAACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: INKFPKPLIQGNKSFSRYDEAYA*GCVELS Trigger: GGACAGTTCAACACAGCCTCAGGCGTAGGCTTCATC...GTATCTAGAGAAAGACTTGTTACCCTGTATTAGTGGCTTTGGGAATTTGTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACACACTTAAGAAACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTATGGGTCTGCTGGCATaGCTGTGCAAACAAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: HHTLKKQSRGLYGMWIFCMGLLA*LCKQGP Trigger: TGGTCCTTGTTTGCACAGGCATGCCAGCAGACCCAT...ACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTTTCTTAAGTGTGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTTGCTGTGTGAGGACATaGCACTGGTGCCATGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSGLSVSPRVLSILKSKFCCVRT*HWCHAL Trigger: CAAAGCATGGCACCAGTGCCATGTCCTCACACAGCA...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTCTGTGATCCCAAAAGGGGCAGAGAAACTTCTTaGCTTCTGGTATTATGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSQEDYTECGFSVCDPKRGRETS*LLVLWG Trigger: TCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCC...CCTTTTGGGATCACAGACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCACACACTTAAGAAACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTTTGGTCTCTGGGATTTaGGCAGAGAAACTTCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HHTLKKQSRGLYGMWIFCLVSGI*AEKLLG Trigger: GCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAA...ACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTTTCTTAAGTGTGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTATGGCACTGGTGCCATaGTTTGGTCCTTTAAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSGLSVSPRVLSILKSKFMALVP*FGPLRV Trigger: AACTCTTAAAGGACCAAAGCATGGCACCAGTGCCAT...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTAACTTAAAAGTGAATTaGTTTTCTCACAGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LIQGNKSFSRYWWIWVVSNLKVN*FSHSQR Trigger: TCTCTGGCTGTGAGAAAACCAATTCACTTTTAAGTT...ACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTAACTTAAAAGTGAATTaGTTTTCTCACAGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSGLSVSPRVLSILKSKFNLKVN*FSHSQR Trigger: TCTCTGGCTGTGAGAAAACCAATTCACTTTTAAGTT...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | TGCGGCCCACCGCAGTCACGGACTGGCCCACACCTATaGCGGTGCCGCTGGCCTGGGCTCCACCCACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: CGPPQSRTGPHL*RCRWPGLHPHS Trigger: TGAGTGTGGGTGGAGCCCAGGCCAGCGGCACCGTCATAGGTGTGGGCCAGTCCGTGACTGCGGTGGGCCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | AGAGGGGCAAGGATGCGGCCCACCGCAGTCACGGACTaGCCCACACCTATGACGGTGCCGCTGGCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGARMRPTAVTD*PTPMTVPLAWA Trigger: AGCCCAGGCCAGCGGCACCGTCATAGGTGTGGGCCAGTCCGTGACTGCGGTGGGCCGCATCCTTGCCCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | ACGGTGCCGCTGGCCTGGGCTCCACCCACACTCAGCTaGAGGTCCGTGATGCAGGTTCTCCCAATGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPLAWAPPTLS*RSVMQVLPMVV Trigger: CACCACCATTGGGAGAACCTGCATCACGGACCTCCAGCTGAGTGTGGGTGGAGCCCAGGCCAGCGGCACCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | TCTCCTGAGCCACTCCAGAGAGAAGAGGGGCAAGGATaGGGCCCACCGCAGTCACGGACTGGCCCACACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPEPLQREEGQG*GPPQSRTGPHL Trigger: TAGGTGTGGGCCAGTCCGTGACTGCGGTGGGCCGCATCCTTGCCCCTCTTCTCTCTGGAGTGGCTCAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | CTAAAGCAGCACCCAGGCTTGGGGGTCCACAGGGACTaGTCTCCTGAGCCACTCCAGAGAGAAGAGGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LKQHPGLGVHRD*SPEPLQREEGQ Trigger: TTGCCCCTCTTCTCTCTGGAGTGGCTCAGGAGATCAGTCCCTGTGGACCCCCAAGCCTGGGTGCTGCTTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | AGGACAGAAGCGTCGAGGAGAAGACCACCATGGCCATaGAGCAGGTCGTGGAGTAGACCACCAGCAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RTEASRRRPPWP*SRSWSRPPAAD Trigger: GTCTGCTGCTGGTGGTCTACTCCACGACCTGCTCCATGGCCATGGTGGTCTTCTCCTCGACGCTTCTGTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | TGGAGAAGGACAGAAGCGTCGAGGAGAAGACCACCATaGCCATGGAGCAGGTCGTGGAGTAGACCACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WRRTEASRRRPP*PWSRSWSRPPA Trigger: TGCTGGTGGTCTACTCCACGACCTGCTCCATGGCCATGGTGGTCTTCTCCTCGACGCTTCTGTCCTTCTCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGTCCGTGATGCAGGTTCTCCCAATGGTGGTGGAGAAGGACAGAAGCGTCACGCCTGAGGCTGTGTaGAACTGTCCCAGGACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WRSVMQVLPMVVEKDRSVTPEAV*NCPRTS Trigger: ACTTGTCCTGGGACAGTTCAACACAGCCTCAGGCGT...GACGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCTGCATCACGGACCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | TCTTTCAAGGCCAACATGACTTCAACCCAGGGTGCCTaGACTGTCCTCTCACTCCTCCTGGCCGTAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFKANMTSTQGA*TVLSLLLAVEV Trigger: CACCTCTACGGCCAGGAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTCATGTTGGCCTTGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | CCAGCCACTACGGGACTTGCTCCGAGGGATCTGACATaGAGATTCAGCAATGGGACCACCATGCTGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: PATTGLAPRDLT*RFSNGTTMLTP Trigger: TGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGTCCCGTAGTGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | CATGTCTTTCAAGGCCAACATGACTTCAACCCAGGGTaGCTGCACTGTCCTCTCACTCCTCCTGGCCGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HVFQGQHDFNPG*LHCPLTPPGRR Trigger: TCTACGGCCAGGAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTCATGTTGGCCTTGAAAGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | GGGACTCTGGAGGGGTTCTCCAAAGCCCAAAGTGACTaGGTCCCAAAGAGGAGAGAAGGCAGTCCTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GTLEGFSKAQSD*VPKRREGSPQS Trigger: ACTTTGAGGACTGCCTTCTCTCCTCTTTGGGACTCAGTCACTTTGGGCTTTGGAGAACCCCTCCAGAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | TCACTCCAGCAGCCCACAAAGGTGCTGGAGAAGAGTTaGAAAACGCCGTATGAGGAGCCTACTATTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLQQPTKVLEKS*KTPYEEPTIPA Trigger: GGCTGGAATAGTAGGCTCCTCATACGGCGTTTTGCAACTCTTCTCCAGCACCTTTGTGGGCTGCTGGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGAAGCAGATGCATCGGTaGGTCTCTGGGATTTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QISYTLLKVTLSRNMLGLKQMHR*VSGIWA Trigger: TGCCCAAATCCCAGAGACCAACCGATGCATCTGCTT...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGCAGACTAGACCAGCATaGAGGAGGAAGACAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QISYTLLKVTLSRNMLGLQTRPA*RRKTEQ Trigger: CTGCTCTGTCTTCCTCCTCAATGCTGGTCTAGTCTG...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | ACTTGGACCACCCACTGTCTCTCAAGTGCCCATCTTTaGCCCGGAGTTACCTGGTTCTACATCTGCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TWTTHCLSSAHL*PGVTWFYICFS Trigger: GGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAGAGACAGTGGGTGGTCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | AGCGCTATGCTCAGTCTAAACTTCCCTATCTGCGGCTaGCTTCTGATGGGTCTGCTGGCATGCCTGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SAMLSLNFPICG*LLMGLLACLCK Trigger: TTTGCACAGGCATGCCAGCAGACCCATCAGAAGTCAGCCGCAGATAGGGAAGTTTAGACTGAGCATAGCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | CACAAAGGTGCTGGAGAAGAGTTGCAAAACGCCGTATaGGGAGCCTACTATTCCAGCCACTACGGGACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HKGAGEELQNAV*GAYYSSHYGTC Trigger: GCAAGTCCCGTAGTGGCTGGAATAGTAGGCTCCTCATACGGCGTTTTGCAACTCTTCTCCAGCACCTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | ACTGTCTCTCTGAGGCTCATCTCCGTGACATTCAGATaGTGTGTGAGGACATGGCACTGGTGCCATGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TVSLRLISVTFR*CVRTWHWCHAL Trigger: CAAAGCATGGCACCAGTGCCATGTCCTCACACAGCATCTGAATGTCACGGAGATGAGCCTCAGAGAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | CCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAGTaGTCCCAATCCTACTCCTGTTTGAGTCTCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PGVTWFYICFSK*SQSYSCLSLSL Trigger: GAGTGAGAGACTCAAACAGGAGTAGGATTGGGACCACTTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR TCA 72 bp | GCTTCCCATCCAAGCTCCAACCATTGTCTGGGATGTTaGGGCTTGTTTCTCTCCAAGGTAACAGCCAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: ASHPSSNHCLGC*GLFLSKVTARL Trigger: TAGTCTGGCTGTTACCTTGGAGAGAAACAAGCCTCAACATCCCAGACAATGGTTGGAGCTTGGATGGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | TCCCTAAGAGCAAATGTTAACTCTACTGTGCCCAGGTaGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: SLRANVNSTVPR*EEKPLRQASDT Trigger: TGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTCTTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | ACTTGCTCCGAGGGATCTGACATGAAGATTCAGCAATaGGACCACCATGCTGACACCAAACAGGTCCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TCSEGSDMKIQQ*DHHADTKQVLN Trigger: GTTAAGGACCTGTTTGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | CTCCCTGTAGTGTTCCTTCTGACTTTATGGGTTCTGTaGTGTGCTTCCCATCCAAGCTCCAACCATTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPVVFLLTLWVL*CASHPSSNHCL Trigger: CAGACAATGGTTGGAGCTTGGATGGGAAGCACACCACAGAACCCATAAAGTCAGAAGGAACACTACAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACATGGCACTGGTGCCATGCTTTGGTCCTTTAAGAGTTCTTAGCGCCTGTAGTCCTCAAAGTTTTTaGTTCCTGGTGCACTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EDMALVPCFGPLRVLSACSPQSF*FLVHSD Trigger: GTCAGAGTGCACCAGGAACAAAAAACTTTGAGGACT...ACAGGCGCTAAGAACTCTTAAAGGACCAAAGCATGGCACCAGTGCCATGTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR GCA 72 bp | TGTAGTGTTCCTTCTGACTTTATGGGTTCTGTGGTGTaGTTCCCATCCAAGCTCCAACCATTGTCTGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CSVPSDFMGSVV*FPSKLQPLSGM Trigger: CATCCCAGACAATGGTTGGAGCTTGGATGGGAAGCACACCACAGAACCCATAAAGTCAGAAGGAACACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | GATTTGGGCAGAGAAACTTCTTGGCTTCTGGTATTATaGGGAGGTGCATTCCAGATAGGTGACCAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: DLGRETSWLLVL*GGAFQIGDQSM Trigger: CATGGACTGGTCACCTATCTGGAATGCACCTCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | TCGGTTGGTCTCTGGGATTTGGGCAGAGAAACTTCTTaGCTTCTGGTATTATGGGGAGGTGCATTCCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SVGLWDLGRETS*LLVLWGGAFQI Trigger: TATCTGGAATGCACCTCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGGGCTTTGATAAGCATTaGAAAGAAAAGTCCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QISYTLLKVTLSRNMLGLGFDKH*KEKSTV Trigger: GACAGTGGACTTTTCTTTCAAATGCTTATCAAAGCC...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | CAGGGTTTAAATAAAGCAGATGCATCGGTTGGTCTCTaGGATTTGGGCAGAGAAACTTCTTGGCTTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGLNKADASVGL*DLGRETSWLLV Trigger: TACCAGAAGCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAACCGATGCATCTGCTTTATTTAAACCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTCTGTGATCCCAAAAGGGGGCAGAGAAACTTCTaGGCTTCTGGTATTATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: NSQEDYTECGFSVCDPKRGQRNF*ASGIMG Trigger: CCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCC...CCTTTTGGGATCACAGACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTaGATCTGGGTTGTCAGTATCTCCACGTGTCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: LIQGNKSFSRYW*IWVVSISTCLI Trigger: GATAAGACACGTGGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CCA 72 bp | CAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTaGGTTGTCAGTATCTCCACGTGTCTTATCAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGNKSFSRYWWI*VVSISTCLINF Trigger: AAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTATAAGGGCTCAGCATTaGATGTTACCAGGGTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LIQGNKSFSRYWWIWVVSIRAQH*MLPGFK Trigger: TTTAAACCCTGGTAACATCAAATGCTGAGCCCTTAT...ACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTCAACTTAAAAGTGAATaGGTTTTCTCACAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIQGNKSFSRYWWIWVVSQLKSE*VFSQPE Trigger: CTCTGGCTGTGAGAAAACCAATTCACTTTTAAGTTG...ACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTGTAAACAGGAACACATaGGTGGACATTCCAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGLSVSPRVLSILKSKFVNRNT*VDIPRR Trigger: CCTCCTTGGAATGTCCACCAATGTGTTCCTGTTTAC...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACAGGGCAGCCCACCCACACTCAGCTaGAGGTCCGTGATGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPGGKRSLSGKLLTQGSPPTLS*RSVMQV Trigger: AACCTGCATCACGGACCTCCAGCTGAGTGTGGGTGG...GCTGCCCTGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGCCACAGGGCCCAAGATaGAGCCTACGCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QISYTLLKVTLSRNMLGLPQGPR*SLRLRL Trigger: CAGCCTCAGGCGTAGGCTTCATCTTGGGCCCTGTGG...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACAGGGCAGCTGTACAGCCGTAGAATaGGTCCCACAGCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPGGKRSLSGKLLTQGSCTAVE*VPQQSQ Trigger: CTGGCTTTGCTGTGGGACCCATTCTACGGCTGTACA...GCTGCCCTGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACAGGGCAGCCCATCAGCAAACGCATaGGGAATACATCCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPGGKRSLSGKLLTQGSPSANA*GIHPTE Trigger: CTCTGTGGGATGTATTCCTCATGCGTTTGCTGATGG...GCTGCCCTGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| 3UTR CAA 72 bp | ACAGGGCCCAAGATGAAGCCTACGCCTGAGGCTGTGTaGAACTGTCCCAGGACAAGTGGTCGCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPKMKPTPEAV*NCPRTSGRSFS Trigger: AGAGAAGGAGCGACCACTTGTCCTGGGACAGTTCAACACAGCCTCAGGCGTAGGCTTCATCTTGGGCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131390.8 |
||
| CDS-3UTR TCA 90 bp | ACACTTGGACCACCCACTGTCTCTCAAGTGCCCATCTTTGACCCGGAGTTACCTTCAGCTGGAGGTCCGTaGTGCAGGTTCTCCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGPPTVSQVPIFDPELPSAGGP*CRFSQW Trigger: CCATTGGGAGAACCTGCATCACGGACCTCCAGCTGA...AGGTAACTCCGGGTCAAAGATGGGCACTTGAGAGACAGTGGGTGGTCCAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAGGGGTCCACAGGGACTaGTCTCCTGAGCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQGVHRD*SPEPLQ Trigger: CTGGAGTGGCTCAGGAGATCAGTCCCTGTGGACCCC...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGACACAGGGCAGCGCTCCAACCATTGTCTaGGATGTTGAGGCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPGGKRSLSGKLLTQGSAPTIV*DVEACF Trigger: GAAACAAGCCTCAACATCCCAGACAATGGTTGGAGC...GCTGCCCTGTGTCAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAGCAGCACCCAGGCTTaGGGGTCCACAGGGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVPIFDPELPGSTSASPSSTQA*GSTGTD Trigger: ATCAGTCCCTGTGGACCCCCAAGCCTGGGTGCTGCT...TGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | GCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTGTCGCTCCTTCTCTGTaGCCAGGTCAGAAAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ANVNSTVPRWEEKPLRQAVAPSL*PGQKAV Trigger: CACTGCTTTCTGACCTGGTCACAGAGAAGGAGCGAC...AGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | CAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATATGCTGGGGCTGAGGTTCTCCCAATGGTaGTGGAGAAGGACAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QISYTLLKVTLSRNMLGLRFSQW*WRRTEA Trigger: CGCTTCTGTCCTTCTCCACCACCATTGGGAGAACCT...CAGCCCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | CTAATACAGGGTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTTGTCAGTACGGTGCCGCTGGCCTaGGCTCCACCCACACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGNKSFSRYWWIWVVSTVPLA*APPTLS Trigger: GCTGAGTGTGGGTGGAGCCCAGGCCAGCGGCACCGT...ACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTACCCTGTATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR GCA 90 bp | GCCTTGGTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCGAAGAGGGGCAAGGATaGGGCCCACCGCAGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVETLLKAYFMTSYHQSEEGQG*GPPQSR Trigger: CCGTGACTGCGGTGGGCCGCATCCTTGCCCCTCTTC...GGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTACCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAACCGAGGGATCTGACATaGAGATTCAGCAATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQPRDLT*RFSNGT Trigger: GGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGG...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAACTTTCAAGGCCAACATaGCTTCAACCCAGGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQLSRPT*LQPRVP Trigger: AGGCACCCTGGGTTGAAGTCATGTTGGCCTTGAAAG...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR GCA 90 bp | ATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGATGGGTTCTGTGGTGTaGTTCCCATCCAAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLTLLCPGGKRSLSGKLLMGSVV*FPSKLQ Trigger: TTGGAGCTTGGATGGGAAGCACACCACAGAACCCAT...CAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR GCA 90 bp | ATTGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCATTCAAGTTATACTTCCATCAACCCAGGGTGCCTaGACTGTCCTCTCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGFLTAREERDGIQVILPSTQGA*TVLSLL Trigger: GAGGAGTGAGAGGACAGTGCAGGCACCCTGGGTTGA...TGGAAGTATAACTTGAATGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTCTCTGAGGCTCATCTCCGTGACATTCAGATGCTGTGTGAGGACATGGACTTTATGGGTTCTGTaGTGTGCTTCCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSLRLISVTFRCCVRTWTLWVL*CASHPS Trigger: GCTTGGATGGGAAGCACACCACAGAACCCATAAAGT...CCATGTCCTCACACAGCATCTGAATGTCACGGAGATGAGCCTCAGAGAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCATTCAAGTTATACTTCCAAGGAGAAGACCACCATaGCCATGGAGCAGGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGFLTAREERDGIQVILPRRRPP*PWSRSW Trigger: CCACGACCTGCTCCATGGCCATGGTGGTCTTCTCCT...TGGAAGTATAACTTGAATGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | GCCTTGGTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCCGCCTGAGGCTGTGTTaGACTGTCCCAGGACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVETLLKAYFMTSYHQSRLRLC*TVPGQV Trigger: CACTTGTCCTGGGACAGTTCAACACAGCCTCAGGCG...GGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTACCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | ATTGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCATTCAAGTTATACTTCCAGATGAAGCCTACGCCTaGGGCTGTGTTGAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGFLTAREERDGIQVILPDEAYA*GCVELS Trigger: GGACAGTTCAACACAGCCTCAGGCGTAGGCTTCATC...TGGAAGTATAACTTGAATGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | GAGCAAATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGAGACAGAGCAGCAAATaGAGGCTGTCACATAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: EQMLTLLCPGGKRSLSGKRQSSK*RLSHRI Trigger: GATTCTATGTGACAGCCTTCATTTGCTGCTCTGTCT...CTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACATTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | ATTAACAAATTCCCAAAGCCACTAATACAGGGTAACAAGTCTTTCTCTAGATACACTGGCCCACACCTATaGCGGTGCCGCTGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: INKFPKPLIQGNKSFSRYTGPHL*RCRWPG Trigger: CCCAGGCCAGCGGCACCGTCATAGGTGTGGGCCAGT...GTATCTAGAGAAAGACTTGTTACCCTGTATTAGTGGCTTTGGGAATTTGTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGCAGAGAAACTTCTTGGCTTCTGGTATTATGGGGAGGTGCATTCCAGATTCTCCCAATGGTGGTaGAGAAGGACAGAAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IWAEKLLGFWYYGEVHSRFSQWW*RRTEAS Trigger: CGACGCTTCTGTCCTTCTCCACCACCATTGGGAGAA...TCTGGAATGCACCTCCCCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CTCCTACCTCTTTTAGCATGCTGCCTTTCCCTAAGAGCAAATGTTAACTCTACTTACTGTAGTACAGCATaGCGGCCACGCCCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPLLACCLSLRANVNSTYCSTA*RPRPSA Trigger: TGCTGATGGGCGTGGCCGTCATGCTGTACTACAGTA...AGTAGAGTTAACATTTGCTCTTAGGGAAAGGCAGCATGCTAAAAGAGGTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR GCA 90 bp | GGATCTGGGTTGTCAGTATCTCCACGTGTCTTATCAATTTTAAAGTCTAAGTTTCAAAGCCAGCCAGGGTaGCCAGCGCACTGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGLSVSPRVLSILKSKFQSQPG*PAHWCS Trigger: GCTACACCAGTGCGCTGGGCACCCTGGCTGGCTTTG...AAACTTAGACTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTGTAAGCAAATCTCCTACACGCTCCTCAAAGTGACCCTCAGCAGGAATCATTGTCTGGGATGTTaGGGCTTGTTTCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLCKQISYTLLKVTLSRNHCLGC*GLFLSK Trigger: CTTGGAGAGAAACAAGCCTCAACATCCCAGACAATG...ATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTGCTTACACAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR GCA 90 bp | GTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCAATCACGACTTCAACCCAGGGTaGCTGCACTGTCCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VETLLKAYFMTSYHQSNHDFNPG*LHCPLT Trigger: AGTGAGAGGACAGTGCAGGCACCCTGGGTTGAAGTC...GTGATTGGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | GTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCAATCACAGACTAGACCAGCATTaGGGAGGAAGACAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VETLLKAYFMTSYHQSNHRLDQH*GGRQSS Trigger: GCTGCTCTGTCTTCCTCCTCAATGCTGGTCTAGTCT...GTGATTGGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR TCA 90 bp | CATCACACACTTAAGAAACAGTCAAGAGGATTATACGGAATGTGGATTTTCTGTATGGGACCACCATGCTaGCACCAAACAGGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHTLKKQSRGLYGMWIFCMGPPC*HQTGPR Trigger: TCTTGGACCTGTTTGGTGTCAGCATGGTGGTCCCAT...ACAGAAAATCCACATTCCGTATAATCCTCTTGACTGTTTCTTAAGTGTGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| 3UTR CAA 72 bp | TTAAATAAAGCAGATGCATCGGTTGGTCTCTGGGATTaGGGCAGAGAAACTTCTTGGCTTCTGGTATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LNKADASVGLWD*GRETSWLLVLW Trigger: CCATAATACCAGAAGCCAAGAAGTTTCTCTGCCCAAATCCCAGAGACCAACCGATGCATCTGCTTTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CAA 72 bp | GTGTTAAATTCACAGTGGAAACAACTTAAAAGTGAATaGGTTTTCTCACAGCCAGAGAGGAAAGGGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQWKQLKSE*VFSQPERKGTA Trigger: TGCCGTCCCTTTCCTCTCTGGCTGTGAGAAAACCAATTCACTTTTAAGTTGTTTCCACTGTGAATTTAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CAA 72 bp | GTAACAAGTCTTTCTCTAGATACTGGTGGATCTGGGTaGTCAGTATCTCCACGTGTCTTATCAATTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLSLDTGGSG*SVSPRVLSILK Trigger: CTTTAAAATTGATAAGACACGTGGAGATACTGACAACCCAGATCCACCAGTATCTAGAGAAAGACTTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| 3UTR CAA 72 bp | TTGAAAGAAAAGTCCACTGTCTTTGAGAGTATAGCCTaGGTAGAAACACTTCTGAAAGCTTACTTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKEKSTVFESIA*VETLLKAYFMT Trigger: TGTCATGAAGTAAGCTTTCAGAAGTGTTTCTACCAAGGCTATACTCTCAAAGACAGTGGACTTTTCTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039672.6 ENSMUST00000131390.8 |
||
| CDS CCA 90 bp | CACTACGGGACTTGCTCCGAGGGATCTGACATGAAGATTCAGCAATaGGACCACCATGCTGACACCAAACAGGTCCAAGAAGCCTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HYGTCSEGSDMKIQQ*DHHADTKQVQEAYK Trigger: CTTGTAGGCTTCTTGGACCTGTTTGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGTCCCGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CAA 90 bp | ATGTTAACTCTACTGTGCCCAGGTGGGAAGAGAAGCCTCTCAGGCAAGCTTCTGCAGACTAGACCAGCATaGAGGAGGAAGACAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLTLLCPGGKRSLSGKLLQTRPA*RRKTEQ Trigger: CTGCTCTGTCTTCCTCCTCAATGCTGGTCTAGTCTG...CAGAAGCTTGCCTGAGAGGCTTCTCTTCCCACCTGGGCACAGTAGAGTTAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
||
| CDS-3UTR CAA 90 bp | CTCAAGTGCCCATCTTTGACCCGGAGTTACCTGGTTCTACATCTGCTTCTCCAAGTAAACAGGAACACATaGGTGGACATTCCAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LKCPSLTRSYLVLHLLLQVNRNT*VDIPRR Trigger: CCTCCTTGGAATGTCCACCAATGTGTTCCTGTTTAC...TTGGAGAAGCAGATGTAGAACCAGGTAACTCCGGGTCAAAGATGGGCACTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
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| CDS-3UTR CAA 90 bp | GCCTTGGTAGAAACACTTCTGAAAGCTTACTTCATGACATCATACCATCAGTCCACGCCTGAGGCTGTGTaGAACTGTCCCAGGACAAGT | + |
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Preference number: 5 (lower is better) Translates to: ALVETLLKAYFMTSYHQSTPEAV*NCPRTS Trigger: ACTTGTCCTGGGACAGTTCAACACAGCCTCAGGCGT...GGACTGATGGTATGATGTCATGAAGTAAGCTTTCAGAAGTGTTTCTACCAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
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| CDS CCA 72 bp | ACTTGCTCCGAGGGATCTGACATGAAGATTCAGCAATaGGACCACCATGCTGACACCAAACAGGTCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: TCSEGSDMKIQQ*DHHADTKQVQE Trigger: TTCTTGGACCTGTTTGGTGTCAGCATGGTGGTCCCATTGCTGAATCTTCATGTCAGATCCCTCGGAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039672.6 |
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