Pregenerated sensors for MFSD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025759Ensembl transcript IDs: ENSMUST00000026859.11, ENSMUST00000204017.2, ENSMUST00000204054.2, ENSMUST00000204399.3
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGGTGAGCACTACTATTCCACACACAAGGCTGAATGCCCATCGTaGGCCCAAGTAAGTGTACACATGGCTGATGAACACAGGCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: DGEHYYSTHKAECPS*AQVSVHMADEHRPK Trigger: CTTGGGCCTGTGTTCATCAGCCATGTGTACACTTACTTGGGCCCACGATGGGCATTCAGCCTTGTGTGTGGAATAGTAGTGCTCACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR GCA 90 bp | CTGCAGCTTGATGATGTCCCACGTCACACCTTTTTCTCCAATGAGTaGAAAGCAAGTCTGAAAAACTGGACCGAGAATAAAGCCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LQLDDVPRHTFFSNE*KASLKNWTENKAQG Trigger: GCCCTGGGCTTTATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCACTCATTGGAGAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR GCA 90 bp | CCCAGGAAGGCTGCAAGTAAAACTGGTGCTGTGTACATGTTGACCTaGAGCTTGATGATGTCCCACGTCACACCTTTTTCTCCAATGAGT | + |
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Preference number: 1 (lower is better) Translates to: PRKAASKTGAVYMLT*SLMMSHVTPFSPMS Trigger: ACTCATTGGAGAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCACCAGTTTTACTTGCAGCCTTCCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR TCA 90 bp | CATGGCATTTGTTCTTTCCTGAAGGGAAGTAGCACCAGCAATGTATaGTCGGACAACGGCAACATTTCCTGCTCCAAATCCCACCAATCC | + |
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Preference number: 1 (lower is better) Translates to: HGICSFLKGSSTSNV*SDNGNISCSKSHQS Trigger: GGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTTGTCCGATCATACATTGCTGGTGCTACTTCCCTTCAGGAAAGAACAAATGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204054.2 ENSMUST00000204399.3 |
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| 3UTR TCA 90 bp | AGGGCTTGGCATGTGCTTGTATTAGCCATGGCATTTGTTCTTTCCTaGAGGGAAGTAGCACCAGCAATGTATGATCGGACAACGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: RAWHVLVLAMAFVLS*REVAPAMYDRTTAT Trigger: TGTTGCCGTTGTCCGATCATACATTGCTGGTGCTACTTCCCTTCAGGAAAGAACAAATGCCATGGCTAATACAAGCACATGCCAAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204054.2 ENSMUST00000204399.3 |
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| 3UTR TCA 90 bp | ATGTCCCACGTCACACCTTTTTCTCCAATGAGTGCAAAGCAAGTCTaGAAAACTGGACCGAGAATAAAGCCCAGGGCTTGGCATGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: MSHVTPFSPMSAKQV*KTGPRIKPRAWHVL Trigger: AAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCACTCATTGGAGAAAAAGGTGTGACGTGGGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR TCA 90 bp | CCTGAGGTTTGGGTCCTAGAACTTTTGAGTATAATGTATAGGACATaGCACTGCAGGCTGGATAGCCTGTTCCAATTAACACAGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PEVWVLELLSIMYRT*HCRLDSLFQLTQQL Trigger: CAGCTGCTGTGTTAATTGGAACAGGCTATCCAGCCTGCAGTGTCATGTCCTATACATTATACTCAAAAGTTCTAGGACCCAAACCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CCA 90 bp | AGCCATATAAATCCAAGGACATCCATTCCTCATGTTGTTACTACCTaGACCGAGAATAAAGCCCAGGGCTTGGCATGTGCTTGTATTAGC | + |
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Preference number: 1 (lower is better) Translates to: SHINPRTSIPHVVTT*TENKAQGLACACIS Trigger: GCTAATACAAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGGTAGTAACAACATGAGGAATGGATGTCCTTGGATTTATATGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR TCA 90 bp | AGGCACCAGGTCTGTTCAATTGGGCACCCAGTTGGCTGTTCACTGTaGTCTTCTCTTGAAGAATTCCAAAGACCAATAATTATTTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: RHQVCSIGHPVGCSL*SSLEEFQRPIIISP Trigger: TGGGGAAATAATTATTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGTGAACAGCCAACTGGGTGCCCAATTGAACAGACCTGGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CCA 90 bp | ACTACTGTGAATTACACAGAAACGTTGGCGTGCTCTCATTCTCACTaGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAATTTTA | + |
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Preference number: 1 (lower is better) Translates to: TTVNYTETLACSHSH*LFLSLGIPHKGGIL Trigger: TAAAATTCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACGCCAACGTTTCTGTGTAATTCACAGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR CCA 90 bp | TCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTaGAATTTTAAGGTCAGCAGTGACCCAAAGATGAAAGAAAACACA | + |
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Preference number: 1 (lower is better) Translates to: SFSLVISVSGHTTQR*NFKVSSDPKMKENT Trigger: TGTGTTTTCTTTCATCTTTGGGTCACTGCTGACCTTAAAATTCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR TCA 90 bp | AATATCTGCAAATCTGAGTCACAAGTAGAAATGGTTTCTTGCAATTaGAGAACTGTTAGTGTTCAGGTCAGTTTTCCTGTAGGAAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: NICKSESQVEMVSCN*RTVSVQVSFPVGSA Trigger: TGCACTTCCTACAGGAAAACTGACCTGAACACTAACAGTTCTTCAATTGCAAGAAACCATTTCTACTTGTGACTCAGATTTGCAGATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR CCA 90 bp | CCATCATTTACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTaGAAAGAATGGTGTTCAGGTTTTAAGGCTCAGTTTTATTTCATT | + |
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Preference number: 1 (lower is better) Translates to: PSFTADSFRRPCSIR*KEWCSGFKAQFYFI Trigger: AATGAAATAAAACTGAGCCTTAAAACCTGAACACCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGTAAATGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAAGAATCCGTGCTGCACTTCCAGAAGTGGTTAACCAGCCCATGTATATAAGGAACTGGGCCAGATaGATCACTGGGGTGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: GPRIRAALPEVVNQPMYIRNWAR*ITGVYR Trigger: CCTGTACACCCCAGTGATTCATCTGGCCCAGTTCCT...TATATACATGGGCTGGTTAACCACTTCTGGAAGTGCAGCACGGATTCTTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CAA 90 bp | GGGCCAGATGAATCACTGGGGTGTACAGGCACCAGGTCTGTTCAATaGGGCACCCAGTTGGCTGTTCACTGTGATCTTCTCTTGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GPDESLGCTGTRSVQ*GTQLAVHCDLLLKN Trigger: ATTCTTCAAGAGAAGATCACAGTGAACAGCCAACTGGGTGCCCAATTGAACAGACCTGGTGCCTGTACACCCCAGTGATTCATCTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGGAACTGGGCCAGATGAATCACTGGGGTGTACAGGCACCAGGTCTGTTGCCACAACAGCAACTTaGTCAATACTTCCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSGTGPDESLGCTGTRSVATTAT*SILPSG Trigger: TCCTGAAGGAAGTATTGATCAAGTTGCTGTTGTGGC...AACAGACCTGGTGCCTGTACACCCCAGTGATTCATCTGGCCCAGTTCCTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATGGTGAGCACTACTATTCCACACACAAGGCTGAATGCCCATCGTGGGCCCCCAGTGTTAGTGGGGTaGGGATTGTTTCATAAACAG | + |
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Preference number: 2 (lower is better) Translates to: KMVSTTIPHTRLNAHRGPPVLVG*GLFHKQ Trigger: CTGTTTATGAAACAATCCTCACCCCACTAACACTGG...GGGCCCACGATGGGCATTCAGCCTTGTGTGTGGAATAGTAGTGCTCACCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CAA 90 bp | TCACTGGGGTGTACAGGCACCAGGTCTGTTCAATTGGGCACCCAGTaGGCTGTTCACTGTGATCTTCTCTTGAAGAATTCCAAAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: SLGCTGTRSVQLGTQ*AVHCDLLLKNSKDQ Trigger: TTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGTGAACAGCCAACTGGGTGCCCAATTGAACAGACCTGGTGCCTGTACACCCCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACCGAGAATAAAGCCCAGGGCTTGGCATGTGCTTGTATTAGCCATGGCATTAACGGCAACATTTCCTaGTCCAAATCCCACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: WTENKAQGLACACISHGINGNIS*SKSHQS Trigger: GGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTT...AATGCCATGGCTAATACAAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204054.2 ENSMUST00000204399.3 |
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| 3UTR CAA 90 bp | AGAATTCCCAGGAAGGCTGCAAGTAAAACTGGTGCTGTGTACATGTaGACCTGCAGCTTGATGATGTCCCACGTCACACCTTTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RIPRKAASKTGAVYM*TCSLMMSHVTPFSP Trigger: TGGAGAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCACCAGTTTTACTTGCAGCCTTCCTGGGAATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTGTACATGTTGACCTGCAGCTTGATGATGTCCCACGTCACACCTTTTTCAACGGCAACATTTCCTaGTCCAAATCCCACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: CCVHVDLQLDDVPRHTFFNGNIS*SKSHQS Trigger: GGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTT...GAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAGCCATCATTTACTGCTaGCAGCTTCAGAAGACCATG | + |
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Preference number: 2 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGAIIYC*QLQKTM Trigger: CATGGTCTTCTGAAGCTGTCAGCAGTAAATGATGGC...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAACAAAACAAAGTGGCTaGAGGAAAATGCTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGTKQSG*RKMLPA Trigger: GGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGT...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | TTGTTACTACCTGGACCGAGAATAAAGCCCAGGGCTTGGCATGTGCTTGTATTAGCATTTGTTCTTTCCTaGAGGGAAGTAGCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLLPGPRIKPRAWHVLVLAFVLS*REVAPA Trigger: TGCTGGTGCTACTTCCCTTCAGGAAAGAACAAATGC...TAATACAAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGGTAGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CAA 90 bp | ATTCCTCATGTTGTTACTACCTGGACCGAGAATAAAGCCCAGGGCTaGGCATGTGCTTGTATTAGCCATGGCATTTGTTCTTTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: IPHVVTTWTENKAQG*ACACISHGICSFLK Trigger: CTTCAGGAAAGAACAAATGCCATGGCTAATACAAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGGTAGTAACAACATGAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CAA 90 bp | TGCAAAGCAAGTCTGAAAAACTGGACCGAGAATAAAGCCCAGGGCTaGGCATGTGCTTGTATTAGCCATGGCATTTGTTCTTTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: CKASLKNWTENKAQG*ACACISHGICSFLK Trigger: CTTCAGGAAAGAACAAATGCCATGGCTAATACAAGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTGTACATGTTGACCTGCAGCTTGATGATGTCCCACGTCACACCTTTTTCAGTGCAAAGCAAGTCTaGAAAACTGGACCGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: CCVHVDLQLDDVPRHTFFSAKQV*KTGPRI Trigger: TATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCACT...GAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR-3UTR GCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGCACTGCATAGTCCATTaGTTTATACAGAGCCCTACA | + |
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Preference number: 2 (lower is better) Translates to: RALILTGYFCLWAYHTKVHCIVH*FIQSPT Trigger: TGTAGGGCTCTGTATAAAGCAATGGACTATGCAGTG...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAAGAATCCGTGCTGCACTTCCAGAAGTGGTTAACCAGCCCATGTATATAAGTACAGACCATACCTaGCACAACTTCAAAGTTATA | + |
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Preference number: 2 (lower is better) Translates to: GPRIRAALPEVVNQPMYISTDHT*HNFKVI Trigger: TATAACTTTGAAGTTGTGTCAGGTATGGTCTGTACT...TATATACATGGGCTGGTTAACCACTTCTGGAAGTGCAGCACGGATTCTTGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAATAAGGTGGAAAGAATaGTGTTCAGGTTTTAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGIRWKE*CSGFKA Trigger: AGCCTTAAAACCTGAACACCATTCTTTCCACCTTAT...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | TCATTTACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTGGAAAGAATGGCAAGTTACTCAGTGTTaGGTTGAAGACAGTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SFTADSFRRPCSIRWKEWQVTQC*VEDSRQ Trigger: CTGTCTACTGTCTTCAACTCAACACTGAGTAACTTG...CCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGTAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGATCCTCATATATCTGACAGAAAAGGCAACGAGTCTTTTGTAAACAGCTCCACTGTGATCTTCTCTTaGAGAATTCCAAAGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: LDPHISDRKGNESFVNSSTVIFS*RIPKTN Trigger: ATTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGT...GGAGCTGTTTACAAAAGACTCGTTGCCTTTTCTGTCAGATATATGAGGATCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAATGGCAGTATTAGAATTCTAGGGCTGGGAAATGTCTGTCATGTTCTTTTATCTTTTCACTGTTaGGTTCATGGGACTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: FLNGSIRILGLGNVCHVLLSFHC*VHGTPV Trigger: TACTGGAGTCCCATGAACTCAACAGTGAAAAGATAA...AAGAACATGACAGACATTTCCCAGCCCTAGAATTCTAATACTGCCATTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR GCA 90 bp | TATGCTAAGATAAAGGCTTCTTCACTCAGTGCACTTTACTTTTTCCCCAAATATGCTGAAGGAAAATGCTaGCTGCCATCATTTACTGCT | + |
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Preference number: 2 (lower is better) Translates to: YAKIKASSLSALYFFPKYAEGKC*LPSFTA Trigger: AGCAGTAAATGATGGCAGGCAGCATTTTCCTTCAGC...ATATTTGGGGAAAAAGTAAAGTGCACTGAGTGAAGAAGCCTTTATCTTAGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAATGGCAGTATTAGAATTCTAGGGCTGGGAAATGTCTGTCATGTTCTTATGGTTTCTTGCAATTaGAGAACTGTTAGTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLNGSIRILGLGNVCHVLMVSCN*RTVSVQ Trigger: CTGAACACTAACAGTTCTTCAATTGCAAGAAACCAT...AAGAACATGACAGACATTTCCCAGCCCTAGAATTCTAATACTGCCATTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR CCA 72 bp | CACAGCAGCTGTCAGGAACTGGGCCAGATGAATCACTaGGGTGTACAGGCACCAGGTCTGTTCAATTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: HSSCQELGQMNH*GVQAPGLFNWA Trigger: TGCCCAATTGAACAGACCTGGTGCCTGTACACCCCAGTGATTCATCTGGCCCAGTTCCTGACAGCTGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR TCA 72 bp | CCAATTAACACAGCAGCTGTCAGGAACTGGGCCAGATaGATCACTGGGGTGTACAGGCACCAGGTCTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: PINTAAVRNWAR*ITGVYRHQVCS Trigger: TGAACAGACCTGGTGCCTGTACACCCCAGTGATTCATCTGGCCCAGTTCCTGACAGCTGCTGTGTTAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR GCA 72 bp | GATGGTGAGCACTACTATTCCACACACAAGGCTGAATaGCCATCGTGGGCCCAAGTAAGTGTACACATGGCT | + |
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Preference number: 3 (lower is better) Translates to: DGEHYYSTHKAE*PSWAQVSVHMA Trigger: AGCCATGTGTACACTTACTTGGGCCCACGATGGGCATTCAGCCTTGTGTGTGGAATAGTAGTGCTCACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CCA 72 bp | ACACAGGCCCAAGAATCCGTGCTGCACTTCCAGAAGTaGTTAACCAGCCCATGTATATACCCTGAGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: TQAQESVLHFQK*LTSPCIYPEVW Trigger: CCAAACCTCAGGGTATATACATGGGCTGGTTAACCACTTCTGGAAGTGCAGCACGGATTCTTGGGCCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CCA 72 bp | CACTACTATTCCACACACAAGGCTGAATGCCCATCGTaGGCCCAAGTAAGTGTACACATGGCTGATGAACAC | + |
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Preference number: 3 (lower is better) Translates to: HYYSTHKAECPS*AQVSVHMADEH Trigger: GTGTTCATCAGCCATGTGTACACTTACTTGGGCCCACGATGGGCATTCAGCCTTGTGTGTGGAATAGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR CCA 72 bp | AATCCAAGGACATCCATTCCTCATGTTGTTACTACCTaGACCGAGAATAAAGCCCAGGGCTTGGCATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: NPRTSIPHVVTT*TENKAQGLACA Trigger: AGCACATGCCAAGCCCTGGGCTTTATTCTCGGTCCAGGTAGTAACAACATGAGGAATGGATGTCCTTGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGACCACTGCATAGTCCATaGCTTTATACAGAGCCCTAC | + |
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Preference number: 3 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGPLHSP*LYTEPY Trigger: GTAGGGCTCTGTATAAAGCAATGGACTATGCAGTGG...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR TCA 72 bp | TGTTCTTTCCTGAAGGGAAGTAGCACCAGCAATGTATaGTCGGACAACGGCAACATTTCCTGCTCCAAATCC | + |
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Preference number: 3 (lower is better) Translates to: CSFLKGSSTSNV*SDNGNISCSKS Trigger: GGATTTGGAGCAGGAAATGTTGCCGTTGTCCGATCATACATTGCTGGTGCTACTTCCCTTCAGGAAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204054.2 ENSMUST00000204399.3 |
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| 3UTR TCA 72 bp | GTCACACCTTTTTCTCCAATGAGTGCAAAGCAAGTCTaGAAAACTGGACCGAGAATAAAGCCCAGGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VTPFSPMSAKQV*KTGPRIKPRAW Trigger: CCAAGCCCTGGGCTTTATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCACTCATTGGAGAAAAAGGTGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR GCA 72 bp | TCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATaGTGCCTGCCATCATTTACTGCTGACAGCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SRVQQNKVAEGK*CLPSFTADSFR Trigger: TCTGAAGCTGTCAGCAGTAAATGATGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| 3UTR GCA 72 bp | GCTGCAAGTAAAACTGGTGCTGTGTACATGTTGACCTaGAGCTTGATGATGTCCCACGTCACACCTTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: AASKTGAVYMLT*SLMMSHVTPFS Trigger: AGAAAAAGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCACCAGTTTTACTTGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| 3UTR GCA 72 bp | AGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTaGCTGCCATCATTTACTGCTGACAGCTTCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVQQNKVAEGKC*LPSFTADSFRR Trigger: TCTTCTGAAGCTGTCAGCAGTAAATGATGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGAAAGCAGTTCACCTTaGATAAGGAGATTATACCCA | + |
|
Preference number: 3 (lower is better) Translates to: ACSHSHWLFLSLGIPHKGESSSP*IRRLYP Trigger: TGGGTATAATCTCCTTATCAAAGGTGAACTGCTTTC...ACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR TCA 72 bp | CAGATCAGGATCTTACCTTCAGCTCTAAGCTTGCTGTaGGAAACTACTGTGAATTACACAGAAACGTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: QIRILPSALSLL*ETTVNYTETLA Trigger: CGCCAACGTTTCTGTGTAATTCACAGTAGTTTCTCACAGCAAGCTTAGAGCTGAAGGTAAGATCCTGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR GCA 72 bp | TCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTaGCATCATTTACTGCTGACAGCTTCAGAAGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SNKTKWLKENAA*HHLLLTASEDH Trigger: ATGGTCTTCTGAAGCTGTCAGCAGTAAATGATGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR CCA 72 bp | CTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTaGAATTTTAAGGTCAGCAGTGACCCAAAGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVISVSGHTTQR*NFKVSSDPKMK Trigger: TTTCATCTTTGGGTCACTGCTGACCTTAAAATTCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR TCA 72 bp | GTCTGTTCAATTGGGCACCCAGTTGGCTGTTCACTGTaGTCTTCTCTTGAAGAATTCCAAAGACCAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: VCSIGHPVGCSL*SSLEEFQRPII Trigger: AATTATTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGTGAACAGCCAACTGGGTGCCCAATTGAACAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
||
| 3UTR TCA 72 bp | CTTCCAGAAGTGGTTAACCAGCCCATGTATATACCCTaGGGTTTGGGTCCTAGAACTTTTGAGTATAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LPEVVNQPMYIP*GLGPRTFEYNV Trigger: TACATTATACTCAAAAGTTCTAGGACCCAAACCTCAGGGTATATACATGGGCTGGTTAACCACTTCTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
||
| 3UTR GCA 72 bp | TACAGAACTTTTGTCCAGTTCCACTGCATAGTCCATTaGTTTATACAGAGCCCTACAGTTCACACTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YRTFVQFHCIVH*FIQSPTVHTKC Trigger: ACACTTAGTGTGAACTGTAGGGCTCTGTATAAAGCAATGGACTATGCAGTGGAACTGGACAAAAGTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR CCA 72 bp | ACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTaGAAAGAATGGTGTTCAGGTTTTAAGGCTCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TADSFRRPCSIR*KEWCSGFKAQF Trigger: AAACTGAGCCTTAAAACCTGAACACCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR-3UTR CAA 90 bp | AACTTACTCCTGGATCCTCATATATCTGACAGAAAAGGCAACGAGTCTTTTGTAAGCCACAACAGCAACTaGATCAATACTTCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLLLDPHISDRKGNESFVSHNSN*INTSFR Trigger: CCTGAAGGAAGTATTGATCAAGTTGCTGTTGTGGCT...TACAAAAGACTCGTTGCCTTTTCTGTCAGATATATGAGGATCCAGGAGTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
||
| 3UTR CCA 72 bp | AAGTGGTTAACCAGCCCATGTATATACCCTGAGGTTTaGGTCCTAGAACTTTTGAGTATAATGTATAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: KWLTSPCIYPEV*VLELLSIMYRT Trigger: TGTCCTATACATTATACTCAAAAGTTCTAGGACCCAAACCTCAGGGTATATACATGGGCTGGTTAACCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGAGGAACTGGGCCAGATaGATCACTGGGGTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVRNWAR*ITGVYR Trigger: CCTGTACACCCCAGTGATTCATCTGGCCCAGTTCCT...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGGCCAGATGAATCACTaGGGTGTACAGGCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVGQMNH*GVQAPG Trigger: ACCTGGTGCCTGTACACCCCAGTGATTCATCTGGCC...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR CAA 72 bp | AGGAAGGCTGCAAGTAAAACTGGTGCTGTGTACATGTaGACCTGCAGCTTGATGATGTCCCACGTCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKAASKTGAVYM*TCSLMMSHVTP Trigger: AGGTGTGACGTGGGACATCATCAAGCTGCAGGTCAACATGTACACAGCACCAGTTTTACTTGCAGCCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
||
| CDS-3UTR TCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGCATTTGTTCTTTCCTaGAGGGAAGTAGCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVAFVLS*REVAPA Trigger: TGCTGGTGCTACTTCCCTTCAGGAAAGAACAAATGC...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TCATTTACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTGGAAAGAATGGTTCCACACACAAGGCTaGATGCCCATCGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTADSFRRPCSIRWKEWFHTQG*MPIVGP Trigger: TGGGCCCACGATGGGCATTCAGCCTTGTGTGTGGAA...CCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGTAAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGAATTGGGCACCCAGTTaGCTGTTCACTGTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVNWAPS*LFTVIF Trigger: GAAGATCACAGTGAACAGCCAACTGGGTGCCCAATT...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGTTGGCCAAGACTATATaGAGCAATAACCCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVLAKTI*SNNPAQ Trigger: TTGGGCTGGGTTATTGCTTCATATAGTCTTGGCCAA...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGATGATGTCCCACGTCACACCTTTTTCTCCAATGAGTGCAAAGCAAGTCTTTTCTCGGCCTTTTaGAGATATGGCCAGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLDDVPRHTFFSNECKASLFSAF*RYGQMD Trigger: GTCCATCTGGCCATATCTTCAAAAGGCCGAGAAAAG...ACTTGCTTTGCACTCATTGGAGAAAAAGGTGTGACGTGGGACATCATCAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAAACGGCAACATTTCCTaGTCCAAATCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGNGNIS*SKSHQS Trigger: GGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTT...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | AGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTGCCACTTCCCACTGTATTTTaGGAAACTGATTTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RISRVQQNKVAEGKCCLPLPTVF*ETDFPR Trigger: CCTGGGGAAATCAGTTTCCCAAAATACAGTGGGAAG...TGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | CGTGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGCTGCACTTCCAGAAGTaGTTAACCAGCCCATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RALILTGYFCLWAYHTKVLHFQK*LTSPCI Trigger: TATACATGGGCTGGTTAACCACTTCTGGAAGTGCAG...CACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR GCA 90 bp | AGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTGCCACATGAAGACAAGAACTaGCTCAACTCCAAAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RISRVQQNKVAEGKCCLPHEDKN*LNSKSN Trigger: GTTGCTTTTGGAGTTGAGGCAGTTCTTGTCTTCATG...TGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | AGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTGCCATTTATTATGAGCAGCTaGCACGTGGACATACGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RISRVQQNKVAEGKCCLPFIMSS*HVDIRI Trigger: TATGCGTATGTCCACGTGCCAGCTGCTCATAATAAA...TGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | GACAACGGCAACATTTCCTGCTCCAAATCCCACCAATCCACGAGCAATCAACATGGCCTTTTGAAGATATaGCCAGATGGACATTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: DNGNISCSKSHQSTSNQHGLLKI*PDGHYH Trigger: GTGATAATGTCCATCTGGCCATATCTTCAAAAGGCC...ATGTTGATTGCTCGTGGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
||
| CDS-3UTR TCA 90 bp | AGAATAAAGCCCAGGGCTTGGCATGTGCTTGTATTAGCCATGGCATTTGTTCTTTTGGCCAAGACTATATaGAGCAATAACCCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIKPRAWHVLVLAMAFVLLAKTI*SNNPAQ Trigger: TTGGGCTGGGTTATTGCTTCATATAGTCTTGGCCAA...AAGAACAAATGCCATGGCTAATACAAGCACATGCCAAGCCCTGGGCTTTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAGGAGAGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATCCAGTGTTAGTGGGGTaGGGATTGTTTCATAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGRRGYPGSNKTKWLKENPVLVG*GLFHKQ Trigger: CTGTTTATGAAACAATCCTCACCCCACTAACACTGG...ATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCTCTCCTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGAGTTGGCTGTTCACTGTaGTCTTCTCTTGAAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGVGCSL*SSLEEF Trigger: GAATTCTTCAAGAGAAGATCACAGTGAACAGCCAAC...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAATGGCAGTATTAGAATTCTAGGGCTGGGAAATGTCTGTCATGTTCTTAGGCCCAAGAATCCGTaGTGCACTTCCAGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNGSIRILGLGNVCHVLRPKNP*CTSRSG Trigger: ACCACTTCTGGAAGTGCAGCACGGATTCTTGGGCCT...AAGAACATGACAGACATTTCCCAGCCCTAGAATTCTAATACTGCCATTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCATTCTCACTGGTTATTTCTGTCTCTGGGCATACCACACAAAGGTGGACTTCCTTCAGGAATCTaGGGTTCATCTGTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSHSHWLFLSLGIPHKGGLPSGI*GSSVFS Trigger: AGAAAATACAGATGAACCTCAGATTCCTGAAGGAAG...TCCACCTTTGTGTGGTATGCCCAGAGACAGAAATAACCAGTGAGAATGAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TCATTTACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTGGAAAGAATGGGCCACAACAGCAACTTaGTCAATACTTCCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFTADSFRRPCSIRWKEWATTAT*SILPSG Trigger: TCCTGAAGGAAGTATTGATCAAGTTGCTGTTGTGGC...CCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGTAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAGTTCACCTTTGATAAGGAGATTATACCCAGAATGTTTTTATACATCCGCTGAATGCCCATCGTaGGCCCAAGTAAGTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ESSSPLIRRLYPECFYTSAECPS*AQVSVH Trigger: GTGTACACTTACTTGGGCCCACGATGGGCATTCAGC...GGATGTATAAAAACATTCTGGGTATAATCTCCTTATCAAAGGTGAACTGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TCATTTACTGCTGACAGCTTCAGAAGACCATGTAGTATAAGGTGGAAAGAATGGAGTGCAAAGCAAGTCTaGAAAACTGGACCGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SFTADSFRRPCSIRWKEWSAKQV*KTGPRI Trigger: TATTCTCGGTCCAGTTTTTCAGACTTGCTTTGCACT...CCATTCTTTCCACCTTATACTACATGGTCTTCTGAAGCTGTCAGCAGTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAATGGCAGTATTAGAATTCTAGGGCTGGGAAATGTCTGTCATGTTCTTATAATGTATAGGACATaGCACTGCAGGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLNGSIRILGLGNVCHVLIMYRT*HCRLDS Trigger: GCTATCCAGCCTGCAGTGTCATGTCCTATACATTAT...AAGAACATGACAGACATTTCCCAGCCCTAGAATTCTAATACTGCCATTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAATGGCAGTATTAGAATTCTAGGGCTGGGAAATGTCTGTCATGTTCTTGGTGAAGCTACCATTTaGCCAAGACTATATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNGSIRILGLGNVCHVLGEATI*PRLYEA Trigger: TGCTTCATATAGTCTTGGCCAAATGGTAGCTTCACC...AAGAACATGACAGACATTTCCCAGCCCTAGAATTCTAATACTGCCATTCAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| 3UTR CAA 72 bp | TCCTTCAGGAATCTGAGGTTCATCTGTATTTTCTTCTaGAAAATTCACACTCTTACACTGACGTCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFRNLRFICIFF*KIHTLTLTSQV Trigger: GACTTGGGACGTCAGTGTAAGAGTGTGAATTTTCAAGAAGAAAATACAGATGAACCTCAGATTCCTGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTACCATTCAAAGTCAAGTTACTCAGTGTTGAGTTGAAGACAGTAGACAGCACTGTGATCTTCTCTTaGAGAATTCCAAAGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPFKVKLLSVELKTVDSTVIFS*RIPKTN Trigger: ATTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGT...GCTGTCTACTGTCTTCAACTCAACACTGAGTAACTTGACTTTGAATGGTAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | TATGCTAAGATAAAGGCTTCTTCACTCAGTGCACTTTACTTTTTCCCCAAATATCACCTTTTTCTCCAATaGGTGCAAAGCAAGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YAKIKASSLSALYFFPKYHLFLQ*VQSKSE Trigger: TTCAGACTTGCTTTGCACTCATTGGAGAAAAAGGTG...ATATTTGGGGAAAAAGTAAAGTGCACTGAGTGAAGAAGCCTTTATCTTAGCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGTTCACCTTTGATAAGGAGATTATACCCAGAATGTTTTTATACATCCTGTATTTTGGGAAACTaGTTTCCCCAGGGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSSPLIRRLYPECFYTSCILGN*FPQGNK Trigger: CTTGTTACCCTGGGGAAATCAGTTTCCCAAAATACA...GGATGTATAAAAACATTCTGGGTATAATCTCCTTATCAAAGGTGAACTGCTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS GCA 90 bp | ATCTACTCTTGTAATGCTCTTGGGTTTCTATCTCGCTCCATTCTCTaGTTCCGGGTGATCCCGGGCCCAAGAGGGGCTCCCGCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IYSCNALGFLSRSIL*FRVIPGPRGAPARP Trigger: AGGCCGAGCGGGAGCCCCTCTTGGGCCCGGGATCACCCGGAAGCAGAGAATGGAGCGAGATAGAAACCCAAGAGCATTACAAGAGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026859.11 ENSMUST00000204399.3 |
||
| CDS-3UTR CAA 90 bp | TGTATGATCGGACAACGGCAACATTTCCTGCTCCAAATCCCACCAATCCACGAGACTCTTGTAATGCTCTaGGGTTTCTATCTCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CMIGQRQHFLLQIPPIHETLVML*GFYLAP Trigger: TGGAGCGAGATAGAAACCCAAGAGCATTACAAGAGT...CTCGTGGATTGGTGGGATTTGGAGCAGGAAATGTTGCCGTTGTCCGATCATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAGGAGAGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATATGTTGACCTGCAGCTaGATGATGTCCCACGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KGRRGYPGSNKTKWLKENMLTCS*MMSHVT Trigger: TGTGACGTGGGACATCATCAAGCTGCAGGTCAACAT...ATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCTCTCCTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CAA 90 bp | AGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTGCCACGCTCGCCAATCTTTTaGGAAAGTAATTTAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RISRVQQNKVAEGKCCLPRSPIF*ESNLTP Trigger: GGGGGTTAAATTACTTTCCAAAAAGATTGGCGAGCG...TGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAGGAGAGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATAGCCACAACAGCAACTaGATCAATACTTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGRRGYPGSNKTKWLKENSHNSN*INTSFR Trigger: CCTGAAGGAAGTATTGATCAAGTTGCTGTTGTGGCT...ATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCTCTCCTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CAA 90 bp | AGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATGCTGCCTGCCATGGGTCCTAGAACTTTaGAGTATAATGTATAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RISRVQQNKVAEGKCCLPWVLEL*SIMYRT Trigger: TGTCCTATACATTATACTCAAAAGTTCTAGGACCCA...TGGCAGGCAGCATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CAA 90 bp | ATCCTACCATTCAAAGTCAAGTTACTCAGTGTTGAGTTGAAGACAGTAGACAGCACTCTTGTAATGCTCTaGGGTTTCTATCTCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILPFKVKLLSVELKTVDSTLVML*GFYLAP Trigger: TGGAGCGAGATAGAAACCCAAGAGCATTACAAGAGT...GCTGTCTACTGTCTTCAACTCAACACTGAGTAACTTGACTTTGAATGGTAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAGGAGAGGATATCCAGGGTCCAACAAAACAAAGTGGCTGAAGGAAAATCACTGTGATCTTCTCTaGAAGAATTCCAAAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: KGRRGYPGSNKTKWLKENHCDLL*KNSKDQ Trigger: TTGGTCTTTGGAATTCTTCAAGAGAAGATCACAGTG...ATTTTCCTTCAGCCACTTTGTTTTGTTGGACCCTGGATATCCTCTCCTGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
||
| CDS TCA 72 bp | TTGGGTTTCTATCTCGCTCCATTCTCTGCTTCCGGGTaGTCCCGGGCCCAAGAGGGGCTCCCGCTCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LGFYLAPFSASG*SRAQEGLPLGL Trigger: GAGGCCGAGCGGGAGCCCCTCTTGGGCCCGGGATCACCCGGAAGCAGAGAATGGAGCGAGATAGAAACCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026859.11 ENSMUST00000204399.3 |
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| CDS TCA 72 bp | AACTTGCATCAGCTGTCTGATCAATCTGCTTCCGGGTaGTCCCGGGCCCAAGAGGGGCTCCCGCTCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: NLHQLSDQSASG*SRAQEGLPLGL Trigger: GAGGCCGAGCGGGAGCCCCTCTTGGGCCCGGGATCACCCGGAAGCAGATTGATCAGACAGCTGATGCAAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204054.2 |
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| CDS GCA 72 bp | TGTAATGCTCTTGGGTTTCTATCTCGCTCCATTCTCTaGTTCCGGGTGATCCCGGGCCCAAGAGGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: CNALGFLSRSIL*FRVIPGPRGAP Trigger: GGGAGCCCCTCTTGGGCCCGGGATCACCCGGAAGCAGAGAATGGAGCGAGATAGAAACCCAAGAGCATTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026859.11 ENSMUST00000204399.3 |
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| CDS GCA 72 bp | ATATGGCCAGATGGACATTATCACAATAGAAAAACCTaGTTCCGGGTGATCCCGGGCCCAAGAGGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IWPDGHYHNRKT*FRVIPGPRGAP Trigger: GGGAGCCCCTCTTGGGCCCGGGATCACCCGGAAGCAGGTTTTTCTATTGTGATAATGTCCATCTGGCCATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204017.2 |
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| CDS CAA 72 bp | AATCCTCACAGACTTCCATCTACTCTTGTAATGCTCTaGGGTTTCTATCTCGCTCCATTCTCTGCTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NPHRLPSTLVML*GFYLAPFSASG Trigger: CCCGGAAGCAGAGAATGGAGCGAGATAGAAACCCAAGAGCATTACAAGAGTAGATGGAAGTCTGTGAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026859.11 ENSMUST00000204399.3 |
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| CDS CAA 90 bp | ACAACCACAAATCCTCCCAGGAGAATAGCACGCTCGCCAATCTTTTaGGAAAGTAATTTAACCCCCATGAAGACAAGAACTGCCTCAACT | + |
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Preference number: 6 (lower is better) Translates to: TTTNPPRRIARSPIF*ESNLTPMKTRTAST Trigger: AGTTGAGGCAGTTCTTGTCTTCATGGGGGTTAAATTACTTTCCAAAAAGATTGGCGAGCGTGCTATTCTCCTGGGAGGATTTGTGGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| CDS TCA 72 bp | CTGTTGTGTAAATCTTCCCACTGTATTTTGGGAAACTaGTTTCCCCAGGGTAACAAGATAAAGAAGCCGACC | + |
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Preference number: 6 (lower is better) Translates to: LLCKSSHCILGN*FPQGNKIKKPT Trigger: GGTCGGCTTCTTTATCTTGTTACCCTGGGGAAATCAGTTTCCCAAAATACAGTGGGAAGATTTACACAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026859.11 |
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| CDS CAA 72 bp | GAGATGGAGACGATAAGAGGTTCTTTTCTCGGCCTTTaGAAGATATGGCCAGATGGACATTATCACAATAGA | + |
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Preference number: 6 (lower is better) Translates to: EMETIRGSFLGL*KIWPDGHYHNR Trigger: TCTATTGTGATAATGTCCATCTGGCCATATCTTCAAAAGGCCGAGAAAAGAACCTCTTATCGTCTCCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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| CDS CAA 90 bp | ACCGAAATAGAGATGGAGACGATAAGAGGTTCTTTTCTCGGCCTTTaGAAGATATGGCCAGATGGACATTATCACAATAGAAAAACCCAC | + |
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Preference number: 6 (lower is better) Translates to: TEIEMETIRGSFLGL*KIWPDGHYHNRKTH Trigger: GTGGGTTTTTCTATTGTGATAATGTCCATCTGGCCATATCTTCAAAAGGCCGAGAAAAGAACCTCTTATCGTCTCCATCTCTATTTCGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204399.3 |
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