Pregenerated sensors for MFSD7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029490Ensembl transcript IDs: ENSMUST00000031455.5, ENSMUST00000238510.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGGTGGGACTAACAGTCCTTGGATCCCTGGCACACATCGTGGGTaGAGAGGATCCGCCAGACTCAGCCTCCAGGCGCCGGTATGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LGGTNSPWIPGTHRG*RGSARLSLQAPVWG Trigger: ACCCCATACCGGCGCCTGGAGGCTGAGTCTGGCGGATCCTCTTCACCCACGATGTGTGCCAGGGATCCAAGGACTGTTAGTCCCACCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CCA 90 bp | CCACAGGTGCCACTGAGAAGCCAAAGAGCCCAAAGAGGGAGCAGATaGCAGCCAGTGCAAGGGTCTGTCCCTGCAGCTGGGATACCAGAG | + |
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Preference number: 1 (lower is better) Translates to: PQVPLRSQRAQRGSR*QPVQGSVPAAGIPE Trigger: CTCTGGTATCCCAGCTGCAGGGACAGACCCTTGCACTGGCTGCCATCTGCTCCCTCTTTGGGCTCTTTGGCTTCTCAGTGGCACCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR GCA 90 bp | AGCCCAAAGAGGGAGCAGATGGCAGCCAGTGCAAGGGTCTGTCCCTaGAGCTGGGATACCAGAGCAAAGGCCACAGAGGTCATGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPKREQMAASARVCP*SWDTRAKATEVMEV Trigger: GACTTCCATGACCTCTGTGGCCTTTGCTCTGGTATCCCAGCTGCAGGGACAGACCCTTGCACTGGCTGCCATCTGCTCCCTCTTTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR GCA 90 bp | ACAGTCAGTGCCGTCAATAGCAGCATGATGAGCATACCCTCGGCCTaGCCCAGGACAAAGATCAAGCCAGCAGAGGCACCCTCACCCACA | + |
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Preference number: 1 (lower is better) Translates to: TVSAVNSSMMSIPSA*PRTKIKPAEAPSPT Trigger: TGTGGGTGAGGGTGCCTCTGCTGGCTTGATCTTTGTCCTGGGGCAGGCCGAGGGTATGCTCATCATGCTGCTATTGACGGCACTGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CCA 90 bp | AAGAGGGAGCAGATGGCAGCCAGTGCAAGGGTCTGTCCCTGCAGCTaGGATACCAGAGCAAAGGCCACAGAGGTCATGGAAGTCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: KREQMAASARVCPCS*DTRAKATEVMEVRQ Trigger: CTGTCTGACTTCCATGACCTCTGTGGCCTTTGCTCTGGTATCCCAGCTGCAGGGACAGACCCTTGCACTGGCTGCCATCTGCTCCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR TCA 90 bp | CAGAGGTCATGGAAGTCAGACAGAGGCCTATCTTGGTGGCTTCGGTaGAGTGCTTGGTCCGATCCACATACAGGCCTAGAAGCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: QRSWKSDRGLSWWLR*SAWSDPHTGLEAVP Trigger: GGGCACTGCTTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGACTTCCATGACCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR GCA 90 bp | GTCATGGAAGTCAGACAGAGGCCTATCTTGGTGGCTTCGGTGAAGTaGTTGGTCCGATCCACATACAGGCCTAGAAGCAGTGCCCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: VMEVRQRPILVASVK*LVRSTYRPRSSAPK Trigger: TTTGGGGGCACTGCTTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGACTTCCATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR TCA 90 bp | CTCATTAGAATAGCCACTGGCACAAAGGATCTGTTCCAGGAGGGCTaGGAAGCTAGAGAAGACACCAATGCCACCACCGAAGCATACGGC | + |
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Preference number: 1 (lower is better) Translates to: LIRIATGTKDLFQEG*EAREDTNATTEAYG Trigger: GCCGTATGCTTCGGTGGTGGCATTGGTGTCTTCTCTAGCTTCTCAGCCCTCCTGGAACAGATCCTTTGTGCCAGTGGCTATTCTAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR TCA 90 bp | GCCTATGCTTTACTAGACGTCTCTGGGCATAGTCTCTGCCCATTCTaGATGTCCTTTGGAGACAGAAGCAGGGCCAGGAGCTTCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: AYALLDVSGHSLCPF*MSFGDRSRARSFLQ Trigger: TTGAAGGAAGCTCCTGGCCCTGCTTCTGTCTCCAAAGGACATTCAGAATGGGCAGAGACTATGCCCAGAGACGTCTAGTAAAGCATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR TCA 90 bp | TACAAAGTGTTGAGCTATATCCTTACCCATGTGGAGGAGAAAGTGTaGGCTGCTCCACCATTCAGGCTGCAACCTGCAGCTAGCTCAATA | + |
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Preference number: 1 (lower is better) Translates to: YKVLSYILTHVEEKV*AAPPFRLQPAASSI Trigger: TATTGAGCTAGCTGCAGGTTGCAGCCTGAATGGTGGAGCAGCTCACACTTTCTCCTCCACATGGGTAAGGATATAGCTCAACACTTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR GCA 90 bp | GGGTCTTCTAACGACTTTGCCTCTGTCAGAGCTTTTAGCATGGCTTaGACAATCAAAGAAACCCTAGCAAGCCTATGCTTTACTAGACGT | + |
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Preference number: 1 (lower is better) Translates to: GSSNDFASVRAFSMA*TIKETLASLCFTRR Trigger: ACGTCTAGTAAAGCATAGGCTTGCTAGGGTTTCTTTGATTGTGCAAGCCATGCTAAAAGCTCTGACAGAGGCAAAGTCGTTAGAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR TCA 90 bp | CTCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTaGCAACCTAGACTACAAAGTGTTGAGCTATATCCTTACCCATGT | + |
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Preference number: 1 (lower is better) Translates to: LSGESDARVFPHRCG*QPRLQSVELYPYPC Trigger: ACATGGGTAAGGATATAGCTCAACACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTCCCAGAGGCAGACAGTaGCCAACAGACAGGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PSSSSSLHQRELPIDTPPPRGRQ*PTDRQG Trigger: CCCTTGCCTGTCTGTTGGCCACTGTCTGCCTCTGGG...AGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CAA 90 bp | TGTATGAGCAGTTTGAGCCCTCGGAGGAAACTCTCTGAAGTAGAGTaGGCAGCCCCTGTGGATGGTGGGGTAGGAGGCACACTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CMSSLSPRRKLSEVE*AAPVDGGVGGTLSQ Trigger: CTGGGAGAGTGTGCCTCCTACCCCACCATCCACAGGGGCTGCCAACTCTACTTCAGAGAGTTTCCTCCGAGGGCTCAAACTGCTCATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CAA 90 bp | GAAGAGGATCCGCCAGACTCAGCCTCCAGGCGCCGGTATGGGGTGTaGAAGAAGATCACCAAGACACAGGTGAAAAGGGTACATAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: EEDPPDSASRRRYGV*KKITKTQVKRVHRP Trigger: CGGCCTATGTACCCTTTTCACCTGTGTCTTGGTGATCTTCTTCAACACCCCATACCGGCGCCTGGAGGCTGAGTCTGGCGGATCCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGAGCATACCCTCGGCCTGCCCCAGGACAAAGATCAAGCCAGCAGAGGCACTGTTCCAGGAGGGCTaGGAAGCTAGAGAAGACACC | + |
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Preference number: 2 (lower is better) Translates to: MMSIPSACPRTKIKPAEALFQEG*EAREDT Trigger: GGTGTCTTCTCTAGCTTCTCAGCCCTCCTGGAACAG...TGCCTCTGCTGGCTTGATCTTTGTCCTGGGGCAGGCCGAGGGTATGCTCATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTATTCCCAGCCCCTCCCCTTaGCTTGCCCTTGGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: QRICSLLYSDQLTALCAIPSPSP*LALGHL Trigger: CAGATGGCCAAGGGCAAGGCAAGGGGAGGGGCTGGG...AATAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGGAGCTTCCTTCAAGGCCTCATCTGGAGGAGTCAAGCCAGGAGTCTCAAGGCCACAGAGGTCATaGAAGTCAGACAGAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: GPGASFKASSGGVKPGVSRPQRS*KSDRGL Trigger: TAGGCCTCTGTCTGACTTCCATGACCTCTGTGGCCT...TGAGACTCCTGGCTTGACTCCTCCAGATGAGGCCTTGAAGGAAGCTCCTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CAA 90 bp | AGAGCAAAGGCCACAGAGGTCATGGAAGTCAGACAGAGGCCTATCTaGGTGGCTTCGGTGAAGTGCTTGGTCCGATCCACATACAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RAKATEVMEVRQRPI*VASVKCLVRSTYRP Trigger: AGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGACTTCCATGACCTCTGTGGCCTTTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGGAGCTTCCTTCAAGGCCTCATCTGGAGGAGTCAAGCCAGGAGTCTCACCTCATCGATGTGGCTaGCAACCTAGACTACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: GPGASFKASSGGVKPGVSPHRCG*QPRLQS Trigger: ACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAGG...TGAGACTCCTGGCTTGACTCCTCCAGATGAGGCCTTGAAGGAAGCTCCTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTCCCAGCCCCTCCCCTTaGCTTGCCCTTGGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: TIKLSTWSYSGDKFFSQSPSPSP*LALGHL Trigger: CAGATGGCCAAGGGCAAGGCAAGGGGAGGGGCTGGG...AGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTGTGGAGGAGAAAGTGTaGGCTGCTCCACCATTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQRICSLLYSDQLTALCAVEEKV*AAPPFR Trigger: CCTGAATGGTGGAGCAGCTCACACTTTCTCCTCCAC...AGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTGGCAGCCCCTGTGGATaGTGGGGTAGGAGGCACACT | + |
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Preference number: 2 (lower is better) Translates to: TIKLSTWSYSGDKFFSQSGSPCG*WGRRHT Trigger: AGTGTGCCTCCTACCCCACCATCCACAGGGGCTGCC...AGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR CAA 90 bp | ATGGAAGTCAGACAGAGGCCTATCTTGGTGGCTTCGGTGAAGTGCTaGGTCCGATCCACATACAGGCCTAGAAGCAGTGCCCCCAAAATT | + |
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Preference number: 2 (lower is better) Translates to: MEVRQRPILVASVKC*VRSTYRPRSSAPKI Trigger: AATTTTGGGGGCACTGCTTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGACTTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTACACTCCCTCTGCCTCTaGACAGGCCCACTTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SQVNQMLEFSLIDVADNLHSLCL*TGPLAV Trigger: TACTGCAAGTGGGCCTGTGCAGAGGCAGAGGGAGTG...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCACTCCCTCTGCCTCTaGACAGGCCCACTTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SMSVPFICHSHHHITPSIHSLCL*TGPLAV Trigger: TACTGCAAGTGGGCCTGTGCAGAGGCAGAGGGAGTG...GATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTGGCCATCTGACCCTCTTCATCCCTGAACAGGTCAAACAAGACTCGAAACTTCTCCCAGTCTTATaGCAGGAACCCCTAACTCAC | + |
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Preference number: 2 (lower is better) Translates to: ALGHLTLFIPEQVKQDSKLLPVL*QEPLTH Trigger: GTGAGTTAGGGGTTCCTGGCATAAGACTGGGAGAAG...TTTCGAGTCTTGTTTGACCTGTTCAGGGATGAAGAGGGTCAGATGGCCAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACCGTGTCTGGGCTGCTTGAACCTAGGAACCTTGTCCCTCCTCCTCCTCCTCCCATGAGTGTTCATTaGAGAGAATATGTTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VTVSGLLEPRNLVPPPPPPMSVH*REYVPY Trigger: GTAGGGAACATATTCTCTGCAATGAACACTCATGGG...AGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAAGCAGCCCAGACACGGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCAGCTGGGATACCAGAGCAAAGGCCACAGAGGTCATGGAAGTCAGACAATCAAGCTCAGTACCTaGTCATACAGTGGAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: SLQLGYQSKGHRGHGSQTIKLST*SYSGDK Trigger: CTTGTCTCCACTGTATGACCAGGTACTGAGCTTGAT...TGTCTGACTTCCATGACCTCTGTGGCCTTTGCTCTGGTATCCCAGCTGCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCGGGTCCTCACCCTGCTaGCAGGTAGAAAAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: HVCTIYLPLPPPHYSQYPGSSPC*QVEKDG Trigger: TCCATCCTTTTCTACCTGCCAGCAGGGTGAGGACCC...GGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTATTCTTCAAGGCCTCATCTaGAGGAGTCAAGCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QRICSLLYSDQLTALCAILQGLI*RSQARS Trigger: ACTCCTGGCTTGACTCCTCCAGATGAGGCCTTGAAG...AATAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTATCTTGGTGGCTTCGGTaGAGTGCTTGGTCCGATCCA | + |
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Preference number: 2 (lower is better) Translates to: SQVNQMLEFSLIDVADNLSWWLR*SAWSDP Trigger: TGGATCGGACCAAGCACTTCACCGAAGCCACCAAGA...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTACTAACTCACTCCCTCTaGCTCTGCACAGGCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: SQVNQMLEFSLIDVADNLLTHSL*LCTGPL Trigger: AAGTGGGCCTGTGCAGAGGCAGAGGGAGTGAGTTAG...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCTAACTCACTCCCTCTaGCTCTGCACAGGCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: SMSVPFICHSHHHITPSILTHSL*LCTGPL Trigger: AAGTGGGCCTGTGCAGAGGCAGAGGGAGTGAGTTAG...GATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTGCTCACCGCCCTCTGTaGTATTTTACAATCAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LQRICSLLYSDQLTALCAAHRPL*YFTIKL Trigger: GAGCTTGATTGTAAAATAGCACAGAGGGCGGTGAGC...AGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | AGCATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCTCACCAAGACACAGGTaGAAAGGGTACATAGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: SMSVPFICHSHHHITPSISPRHR*KGYIGR Trigger: CCGGCCTATGTACCCTTTTCACCTGTGTCTTGGTGA...GATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATGCCAGGAACCCCTAACTCACCCTCATCGATGTGGCTaGCAACCTAGACTACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: IQWRQVLLPVLCQEPLTHPHRCG*QPRLQS Trigger: ACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAGG...GTGAGTTAGGGGTTCCTGGCATAAGACTGGGAGAAGAACTTGTCTCCACTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGGCCATCTGACCCTCTTCATCCCTGAACAGGTCAAACAAGACTCGAAAACACAAACTTTCCCATaGGTGTTCATTGCAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ALGHLTLFIPEQVKQDSKTQTFP*VFIAEN Trigger: ATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGT...TTTCGAGTCTTGTTTGACCTGTTCAGGGATGAAGAGGGTCAGATGGCCAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTGCTCACCGCCCTCTGTaGTATTTTACAATCAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: TIKLSTWSYSGDKFFSQSAHRPL*YFTIKL Trigger: GAGCTTGATTGTAAAATAGCACAGAGGGCGGTGAGC...AGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCATACCTGGTCATACAGTaGAGACAAGTTCTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: MSVPFICHSHHHITPSIPYLVIQ*RQVLLP Trigger: TGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTA...TGGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCTACCTGGTCATACAGTaGAGACAAGTTCTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SMSVPFICHSHHHITPSIYLVIQ*RQVLLP Trigger: TGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTA...GATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCACTCGAAACCAATGAATaGAGTTCAGTGCCTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: MSVPFICHSHHHITPSIPLETNE*SSVPVS Trigger: ACTTACAGGCACTGAACTTCATTCATTGGTTTCGAG...TGGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTGGACACACAAACTTTCCCATGAGTGTTCATTGCAGAGAATATGTTCCCAAGACTCGAAACCAATaGATGAAGTTCAGTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: KVGHTNFPMSVHCREYVPKTRNQ*MKFSAC Trigger: ACAGGCACTGAACTTCATTCATTGGTTTCGAGTCTT...GGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCCAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTCAGAGCTTTTAGCATaGCTTGCACAATCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLCYFTIKLSTWSYSGDKSELLA*LAQSKK Trigger: TTTCTTTGATTGTGCAAGCCATGCTAAAAGCTCTGA...CTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCAGAGCTTTTAGCATaGCTTGCACAATCAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCAILQSSSVPGHTVETSSELLA*LAQSKK Trigger: TTTCTTTGATTGTGCAAGCCATGCTAAAAGCTCTGA...ACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR CCA 72 bp | AGGGACACTGTCCAGTCCAGAGGGTCCTCACCCTGCTaGCAGGTAGAAAAGGATGGACCCGTTCGCCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RDTVQSRGSSPC*QVEKDGPVRRT Trigger: TGTGCGGCGAACGGGTCCATCCTTTTCTACCTGCCAGCAGGGTGAGGACCCTCTGGACTGGACAGTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | GCCGTCAATAGCAGCATGATGAGCATACCCTCGGCCTaGCCCAGGACAAAGATCAAGCCAGCAGAGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: AVNSSMMSIPSA*PRTKIKPAEAP Trigger: GGGTGCCTCTGCTGGCTTGATCTTTGTCCTGGGGCAGGCCGAGGGTATGCTCATCATGCTGCTATTGACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CCA 72 bp | GGAGGAGTCAAGCCAGGAGTCTCAAGTGGTGGCACTTaGGTGGGACTAACAGTCCTTGGATCCCTGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GGVKPGVSSGGT*VGLTVLGSLAH Trigger: GTGTGCCAGGGATCCAAGGACTGTTAGTCCCACCCAAGTGCCACCACTTGAGACTCCTGGCTTGACTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CCA 72 bp | AGAAGCAGGGCCAGGAGCTTCCTTCAAGGCCTCATCTaGAGGAGTCAAGCCAGGAGTCTCAAGTGGTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RSRARSFLQGLI*RSQARSLKWWH Trigger: GTGCCACCACTTGAGACTCCTGGCTTGACTCCTCCAGATGAGGCCTTGAAGGAAGCTCCTGGCCCTGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | GCATTCAACAGCCAGCTCCATGACCACAGGTGCCACTaGGAAGCCAAAGAGCCCAAAGAGGGAGCAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AFNSQLHDHRCH*EAKEPKEGADG Trigger: GCCATCTGCTCCCTCTTTGGGCTCTTTGGCTTCTCAGTGGCACCTGTGGTCATGGAGCTGGCTGTTGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | GATCAAGCCAGCAGAGGCACCCTCACCCACAGGAAATaGGCATTCAACAGCCAGCTCCATGACCACAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: DQASRGTLTHRK*AFNSQLHDHRC Trigger: GCACCTGTGGTCATGGAGCTGGCTGTTGAATGCTCATTTCCTGTGGGTGAGGGTGCCTCTGCTGGCTTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | CCAGTCTTATGCCAGGAACCCCTAACTCACTCCCTCTaGCTCTGCACAGGCCCACTTGCAGTAGCCACACAT | + |
|
Preference number: 3 (lower is better) Translates to: PVLCQEPLTHSL*LCTGPLAVATH Trigger: ATGTGTGGCTACTGCAAGTGGGCCTGTGCAGAGGCAGAGGGAGTGAGTTAGGGGTTCCTGGCATAAGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR CCA 72 bp | GGCCTCATCTGGAGGAGTCAAGCCAGGAGTCTCAAGTaGTGGCACTTGGGTGGGACTAACAGTCCTTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GLIWRSQARSLK*WHLGGTNSPWI Trigger: GATCCAAGGACTGTTAGTCCCACCCAAGTGCCACCACTTGAGACTCCTGGCTTGACTCCTCCAGATGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | TTATGCCAGGAACCCCTAACTCACTCCCTCTGCCTCTaGACAGGCCCACTTGCAGTAGCCACACATATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCQEPLTHSLCL*TGPLAVATHMA Trigger: AGCCATATGTGTGGCTACTGCAAGTGGGCCTGTGCAGAGGCAGAGGGAGTGAGTTAGGGGTTCCTGGCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR CCA 72 bp | CTCATCTGGAGGAGTCAAGCCAGGAGTCTCAAGTGGTaGCACTTGGGTGGGACTAACAGTCCTTGGATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LIWRSQARSLKW*HLGGTNSPWIP Trigger: AGGGATCCAAGGACTGTTAGTCCCACCCAAGTGCCACCACTTGAGACTCCTGGCTTGACTCCTCCAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | GTCAGACAGAGGCCTATCTTGGTGGCTTCGGTGAAGTaGTTGGTCCGATCCACATACAGGCCTAGAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VRQRPILVASVK*LVRSTYRPRSS Trigger: ACTGCTTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | ATAGCCACTGGCACAAAGGATCTGTTCCAGGAGGGCTaGGAAGCTAGAGAAGACACCAATGCCACCACCGAA | + |
|
Preference number: 3 (lower is better) Translates to: IATGTKDLFQEG*EAREDTNATTE Trigger: TTCGGTGGTGGCATTGGTGTCTTCTCTAGCTTCTCAGCCCTCCTGGAACAGATCCTTTGTGCCAGTGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | TGGAAGTCAGACAGAGGCCTATCTTGGTGGCTTCGGTaGAGTGCTTGGTCCGATCCACATACAGGCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WKSDRGLSWWLR*SAWSDPHTGLE Trigger: TTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCTGACTTCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | TTACTAGACGTCTCTGGGCATAGTCTCTGCCCATTCTaGATGTCCTTTGGAGACAGAAGCAGGGCCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLDVSGHSLCPF*MSFGDRSRARS Trigger: GCTCCTGGCCCTGCTTCTGTCTCCAAAGGACATTCAGAATGGGCAGAGACTATGCCCAGAGACGTCTAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCCCGTGTCTGGGCTGCTaGAACCTAGGAACCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVCTIYLPLPPPHYSQYPPCLGC*NLGTLS Trigger: GGACAAGGTTCCTAGGTTCAAGCAGCCCAGACACGG...GGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATGCCAGGAACCCCTAACTCACTTGAACCTAGGAACCTaGTCCCTCCTCCTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: IQWRQVLLPVLCQEPLTHLNLGT*SLLLLL Trigger: GAGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAA...GTGAGTTAGGGGTTCCTGGCATAAGACTGGGAGAAGAACTTGTCTCCACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCTTGAACCTAGGAACCTaGTCCCTCCTCCTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HVCTIYLPLPPPHYSQYPLNLGT*SLLLLL Trigger: GAGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAA...GGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | TTGAGCTATATCCTTACCCATGTGGAGGAGAAAGTGTaGGCTGCTCCACCATTCAGGCTGCAACCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSYILTHVEEKV*AAPPFRLQPAA Trigger: AGCTGCAGGTTGCAGCCTGAATGGTGGAGCAGCTCACACTTTCTCCTCCACATGGGTAAGGATATAGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCACTCTCTGAAGTAGAGTaGGCAGCCCCTGTGGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: MSVPFICHSHHHITPSIPLSEVE*AAPVDG Trigger: ACCATCCACAGGGGCTGCCAACTCTACTTCAGAGAG...TGGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | TTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTaGTATTTTACAATCAAGCTCAGTACCTGGTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: FPTLLRPAHRPL*YFTIKLSTWSY Trigger: GTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCGGTCTTCTAACGACTTaGCCTCTGTCAGAGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HVCTIYLPLPPPHYSQYPGLLTT*PLSELL Trigger: TAAAAGCTCTGACAGAGGCAAAGTCGTTAGAAGACC...GGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | AATTCCAAACACGATGAAGAGAGCCCCACAGAGGCCTaGGAACTCATTAGAATAGCCACTGGCACAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NSKHDEESPTEA*ELIRIATGTKD Trigger: ATCCTTTGTGCCAGTGGCTATTCTAATGAGTTCTCAGGCCTCTGTGGGGCTCTCTTCATCGTGTTTGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACACAAACTTTCCCATGAGTGTTCATTGCAGAGAATATGTTCCCTACTCTGGTCTTCTAACGACTTaGCCTCTGTCAGAGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GHTNFPMSVHCREYVPYSGLLTT*PLSELL Trigger: TAAAAGCTCTGACAGAGGCAAAGTCGTTAGAAGACC...AGAGTAGGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR TCA 72 bp | GAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTaGCAACCTAGACTACAAAGTGTTGAGCTATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: ESDARVFPHRCG*QPRLQSVELYP Trigger: AGGATATAGCTCAACACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR GCA 72 bp | AAAGTTGGACACACAAACTTTCCCATGAGTGTTCATTaGAGAGAATATGTTCCCTACTCTACTCAGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVGHTNFPMSVH*REYVPYSTQTS Trigger: GCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCCAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTAGGCAGCCCCTGTGGATaGTGGGGTAGGAGGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPPPSTNVSSPSIPHLGSPCG*WGRRHT Trigger: AGTGTGCCTCCTACCCCACCATCCACAGGGGCTGCC...TAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCAGGCTCGCTGATGCTCTaGAAACCACAAGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSSSSSLHQRELPIDTPGSLML*KPQGSQ Trigger: CTGGCTGCCTTGTGGTTTCCAGAGCATCAGCGAGCC...TGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTATCTTGGGCAAGGGTCTGTCCCTaGAGCTGGGATACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSTNVSSPSIPHLSWARVCP*SWDTRA Trigger: TGCTCTGGTATCCCAGCTGCAGGGACAGACCCTTGC...CCAAGATAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTATCTTGGGTCTGTCCCTGCAGCTaGGATACCAGAGCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSTNVSSPSIPHLSWVCPCS*DTRAKA Trigger: GGCCTTTGCTCTGGTATCCCAGCTGCAGGGACAGAC...CCAAGATAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACAAAGAGGGAGCAGATaGCAGCCAGTGCAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSSSSSLHQRELPIDTPQRGSR*QPVQGS Trigger: AGACCCTTGCACTGGCTGCCATCTGCTCCCTCTTTG...TGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTAGGGTCCTCACCCTGCTaGCAGGTAGAAAAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPPPPSTNVSSPSIPHLGSSPC*QVEKDG Trigger: TCCATCCTTTTCTACCTGCCAGCAGGGTGAGGACCC...TAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTGGGACTAACAGTCCTTaGATCCCTGGCACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSSSSLHQRELPIDTPPGTNSP*IPGTHR Trigger: ACGATGTGTGCCAGGGATCCAAGGACTGTTAGTCCC...AGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTATCTTGGCTGTTCCAGGAGGGCTaGGAAGCTAGAGAAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSTNVSSPSIPHLSWLFQEG*EAREDT Trigger: GGTGTCTTCTCTAGCTTCTCAGCCCTCCTGGAACAG...CCAAGATAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR TCA 90 bp | TGTCCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCAGCCGGTATGGGGTGTTaGAGAAGATCACCAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CPSSSSSLHQRELPIDTPAGMGC*RRSPRH Trigger: GTGTCTTGGTGATCTTCTTCAACACCCCATACCGGC...TGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR GCA 90 bp | GTTACCGTGTCTGGGCTGCTTGAACCTAGGAACCTTGTCCCTCCTCCTCCTCCTGCAGATGGCAGCCAGTaGAAGGGTCTGTCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTVSGLLEPRNLVPPPPPADGSQ*KGLSLQ Trigger: CTGCAGGGACAGACCCTTGCACTGGCTGCCATCTGC...AGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAAGCAGCCCAGACACGGTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTATCTTGGAGGAGACAGCACATTTaGAATAAGGAGGCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSTNVSSPSIPHLSWRRQHI*NKEAQR Trigger: CCTCTGGGCCTCCTTATTGCAAATGTGCTGTCTCCT...CCAAGATAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| 3UTR CAA 72 bp | AGTTTGAGCCCTCGGAGGAAACTCTCTGAAGTAGAGTaGGCAGCCCCTGTGGATGGTGGGGTAGGAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSPRRKLSEVE*AAPVDGGVGGT Trigger: TGTGCCTCCTACCCCACCATCCACAGGGGCTGCCAACTCTACTTCAGAGAGTTTCCTCCGAGGGCTCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CAA 72 bp | CCGCCAGACTCAGCCTCCAGGCGCCGGTATGGGGTGTaGAAGAAGATCACCAAGACACAGGTGAAAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPDSASRRRYGV*KKITKTQVKRV Trigger: TACCCTTTTCACCTGTGTCTTGGTGATCTTCTTCAACACCCCATACCGGCGCCTGGAGGCTGAGTCTGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CAA 72 bp | TGGAGGAGTCAAGCCAGGAGTCTCAAGTGGTGGCACTaGGGTGGGACTAACAGTCCTTGGATCCCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WRSQARSLKWWH*GGTNSPWIPGT Trigger: TGTGCCAGGGATCCAAGGACTGTTAGTCCCACCCAAGTGCCACCACTTGAGACTCCTGGCTTGACTCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CAA 72 bp | AGACAGAGGCCTATCTTGGTGGCTTCGGTGAAGTGCTaGGTCCGATCCACATACAGGCCTAGAAGCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQRPILVASVKC*VRSTYRPRSSA Trigger: GGCACTGCTTCTAGGCCTGTATGTGGATCGGACCAAGCACTTCACCGAAGCCACCAAGATAGGCCTCTGTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
||
| 3UTR CAA 72 bp | AAGTTCAGTGCCTGTAAGTTACCGTGTCTGGGCTGCTaGAACCTAGGAACCTTGTCCCTCCTCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFSACKLPCLGC*NLGTLSLLLLL Trigger: GAGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAAGCAGCCCAGACACGGTAACTTACAGGCACTGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTTCTTGGTGGCTTCGGTaGAGTGCTTGGTCCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQRICSLLYSDQLTALCASWWLR*SAWSDP Trigger: TGGATCGGACCAAGCACTTCACCGAAGCCACCAAGA...AGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | GTTACCGTGTCTGGGCTGCTTGAACCTAGGAACCTTGTCCCTCCTCCTCCTCCTAGAAGTGCTGTGCTATaGTGTCTGCTACAGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTVSGLLEPRNLVPPPPPRSAVL*CLLQVQ Trigger: TTGCACCTGTAGCAGACACCATAGCACAGCACTTCT...AGGAGGAGGAGGAGGGACAAGGTTCCTAGGTTCAAGCAGCCCAGACACGGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTAGACAGCCAGTTGACCTaGTCCATGGACAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CREYVPYSTQTSSPPSVLDSQLT*SMDRKK Trigger: CTTCTTCCTGTCCATGGATCAGGTCAACTGGCTGTC...TAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTAGAAGGCAAAGGGGCTTaGAATCCTGACAGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CREYVPYSTQTSSPPSVLEGKGA*NPDRQA Trigger: TGCTTGCCTGTCAGGATTCCAAGCCCCTTTGCCTTC...TAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTAGGCAGCCAGCTTGGCTaGAGAAGAGACGACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQVNQMLEFSLIDVADNLGSQLG*RRDDQG Trigger: ACCCTGGTCGTCTCTTCTCCAGCCAAGCTGGCTGCC...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTATTACAAGGCAGCCAGCTTaGCTGGAGAAGAGACGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRICSLLYSDQLTALCAITRQPA*LEKRRP Trigger: TGGTCGTCTCTTCTCCAGCCAAGCTGGCTGCCTTGT...AATAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
||
| CDS-3UTR CCA 90 bp | ATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTACTCCCAGTATCCCACCCAGAGGCAGACAGTaGCCAACAGACAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSVPFICHSHHHITPSIPPRGRQ*PTDRQG Trigger: CCCTTGCCTGTCTGTTGGCCACTGTCTGCCTCTGGG...TGGGATACTGGGAGTAATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | GCCCTTGGCCATCTGACCCTCTTCATCCCTGAACAGGTCAAACAAGACTCGAAAAGGCCACAGAGGTCATaGAAGTCAGACAGAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: ALGHLTLFIPEQVKQDSKRPQRS*KSDRGL Trigger: TAGGCCTCTGTCTGACTTCCATGACCTCTGTGGCCT...TTTCGAGTCTTGTTTGACCTGTTCAGGGATGAAGAGGGTCAGATGGCCAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR TCA 90 bp | TCCCTCATCGATGTGGCTGACAACCTAGACTACAAAGTGTTGAGCTATATCCTTAGCAGCTCAGGAGGCTaGCCACCAGCAGAAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SLIDVADNLDYKVLSYILSSSGG*PPAERP Trigger: GGGTCTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCT...AAGGATATAGCTCAACACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR TCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTAGGCTCTGGCCACTCATaGAGAAGGCAAAGGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SQVNQMLEFSLIDVADNLGSGHS*RRQRGL Trigger: CAAGCCCCTTTGCCTTCTTCATGAGTGGCCAGAGCC...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR TCA 90 bp | ATTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCAAATTCCAAACACGATaGAGAGAGCCCCACAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IAENMFPTLLRPAHRPLCKFQTR*REPHRG Trigger: GCCTCTGTGGGGCTCTCTTCATCGTGTTTGGAATTT...GCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR TCA 90 bp | ACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTCAACAGCCAGCTCCATaGCCACAGGTGCCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TIKLSTWSYSGDKFFSQSQQPAP*PQVPLR Trigger: TCTCAGTGGCACCTGTGGTCATGGAGCTGGCTGTTG...AGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR GCA 90 bp | TGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTAAGGAGACAGCACATTTaGAATAAGGAGGCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CREYVPYSTQTSSPPSVLRRQHI*NKEAQR Trigger: CCTCTGGGCCTCCTTATTGCAAATGTGCTGTCTCCT...TAGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR CCA 90 bp | ATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATGCCAGGAACCCCTAACTCACCTCCAGGCGCCGGTATaGGGTGTTGAAGAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: IQWRQVLLPVLCQEPLTHLQAPV*GVEEDH Trigger: GTGATCTTCTTCAACACCCCATACCGGCGCCTGGAG...GTGAGTTAGGGGTTCCTGGCATAAGACTGGGAGAAGAACTTGTCTCCACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR GCA 90 bp | ATTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCATGGACAGGAAGAAGTaGTGTGCTATGGTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IAENMFPTLLRPAHRPLCMDRKK*CAMVSA Trigger: AGCAGACACCATAGCACAGCACTTCTTCCTGTCCAT...GCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | ACCAGTTATTTCCAATTCCATCATCGTCTTCCTGAGGACCAAAAGGCCATCCTGAGGGCACAGAGGCTCTaGCCACTCATGAAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TSYFQFHHRLPEDQKAILRAQRL*PLMKKA Trigger: TGCCTTCTTCATGAGTGGCCAGAGCCTCTGTGCCCT...CAGGATGGCCTTTTGGTCCTCAGGAAGACGATGATGGAATTGGAAATAACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | ATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATGCCAGGAACCCCTAACTCACCTTCAAGGCCTCATCTaGAGGAGTCAAGCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: IQWRQVLLPVLCQEPLTHLQGLI*RSQARS Trigger: ACTCCTGGCTTGACTCCTCCAGATGAGGCCTTGAAG...GTGAGTTAGGGGTTCCTGGCATAAGACTGGGAGAAGAACTTGTCTCCACTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| 3UTR CAA 72 bp | AGGCCATCCTGTCATACCCTGGGTCTTCTAACGACTTaGCCTCTGTCAGAGCTTTTAGCATGGCTTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: RPSCHTLGLLTT*PLSELLAWLAQ Trigger: TTGTGCAAGCCATGCTAAAAGCTCTGACAGAGGCAAAGTCGTTAGAAGACCCAGGGTATGACAGGATGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTGGACACACAAACTTTCCCATGAGTGTTCATTGCAGAGAATATGTTCCCAGCAGCTCAGGAGGCTaGCCACCAGCAGAAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KVGHTNFPMSVHCREYVPSSSGG*PPAERP Trigger: GGGTCTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCT...GGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCCAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR TCA 90 bp | GGTCTAGGTTTCCAGCATGTCTGTACCATTTATTTGCCACTCCCACCACCACATTGTCATCTGCTTTCTTaGCTAGGGCAGGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLGFQHVCTIYLPLPPPHCHLLS*LGQETA Trigger: TGCTGTCTCCTGCCCTAGTCAAGAAAGCAGATGACA...ATGTGGTGGTGGGAGTGGCAAATAAATGGTACAGACATGCTGGAAACCTAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | ATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATCAGTCCTTGGATCCCTaGCACACATCGTGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IKLSTWSYSGDKFFSQSYQSLDP*HTSWVK Trigger: CTTCACCCACGATGTGTGCCAGGGATCCAAGGACTG...ATAAGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR TCA 90 bp | TCTCAGGTGAATCAGATGCTAGAGTTTTCCCTCATCGATGTGGCTGACAACCTATTAGTGACAGCCAGTTaGCCTGATCCATGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: SQVNQMLEFSLIDVADNLLVTAS*PDPWTG Trigger: TCCTGTCCATGGATCAGGTCAACTGGCTGTCACTAA...TAGGTTGTCAGCCACATCGATGAGGGAAAACTCTAGCATCTGATTCACCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | CCTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGAGTCCAGAACCCAGATaGCAGCCATGCCAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCYFTIKLSTWSYSGDKSPEPR*QPCQMG Trigger: TCCCATTTGGCATGGCTGCCATCTGGGTTCTGGACT...CTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR GCA 90 bp | GGACACACAAACTTTCCCATGAGTGTTCATTGCAGAGAATATGTTCCCTACTCTAGAGGGTCCTCACCCTaGTGGCAGGTAGAAAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GHTNFPMSVHCREYVPYSRGSSP*WQVEKD Trigger: ATCCTTTTCTACCTGCCAGCAGGGTGAGGACCCTCT...AGAGTAGGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR TCA 90 bp | AAAGTTGGACACACAAACTTTCCCATGAGTGTTCATTGCAGAGAATATGTTCCCTCACCAAGACACAGGTaGAAAGGGTACATAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVGHTNFPMSVHCREYVPSPRHR*KGYIGR Trigger: CCGGCCTATGTACCCTTTTCACCTGTGTCTTGGTGA...GGGAACATATTCTCTGCAATGAACACTCATGGGAAAGTTTGTGTGTCCAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR GCA 90 bp | CTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTGGTGTCTGCTACAGGTaGAAAGCTGAGCCAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCAILQSSSVPGHTVETSGVCYR*KAEPKH Trigger: ATGCTTTGGCTCAGCTTTGCACCTGTAGCAGACACC...ACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| 3UTR CAA 72 bp | CTCATCGATGTGGCTGACAACCTAGACTACAAAGTGTaGAGCTATATCCTTACCCATGTGGAGGAGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LIDVADNLDYKV*SYILTHVEEKV Trigger: CACTTTCTCCTCCACATGGGTAAGGATATAGCTCAACACTTTGTAGTCTAGGTTGTCAGCCACATCGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031455.5 ENSMUST00000238510.2 |
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| CDS-3UTR GCA 90 bp | ATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATAGAAAAATTCAACCATaGACCCAGGATAGTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IKLSTWSYSGDKFFSQSYRKIQP*TQDSRS Trigger: GGAGCGACTATCCTGGGTGCATGGTTGAATTTTTCT...ATAAGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CCA 90 bp | CCTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGCCATGCCAAATGGGATaGATAACACAAAGTATATTA | + |
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Preference number: 4 (lower is better) Translates to: PLCYFTIKLSTWSYSGDKPCQMG*ITQSIL Trigger: TAATATACTTTGTGTTATCCATCCCATTTGGCATGG...CTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCTCCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTCACAAGGCAGCCAGCTaGGCTGGAGAAGAGACGACC | + |
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Preference number: 5 (lower is better) Translates to: PSSSSSLHQRELPIDTPPHKAAS*AGEETT Trigger: GGTCGTCTCTTCTCCAGCCAAGCTGGCTGCCTTGTG...AGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGGAGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS CCA 90 bp | AACCACAAGGCAGCCAGCTTGGCTGGAGAAGAGACGACCAGGGTCTaGGCCAGGGCACAGAGGCTCTGGCCACTCATGAAGAAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHKAASLAGEETTRV*ARAQRLWPLMKKAK Trigger: CTTTGCCTTCTTCATGAGTGGCCAGAGCCTCTGTGCCCTGGCCCAGACCCTGGTCGTCTCTTCTCCAGCCAAGCTGGCTGCCTTGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTCCTCCCTCCACCAACGTGAGCTCCCCATCGATACCCCACCTATCTTGGCGCCGGTATGGGGTGTaGAAGAAGATCACCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PPPPSTNVSSPSIPHLSWRRYGV*KKITKT Trigger: TGTCTTGGTGATCTTCTTCAACACCCCATACCGGCG...CCAAGATAGGTGGGGTATCGATGGGGAGCTCACGTTGGTGGAGGGAGGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | ATTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCGGAGGCCCAGAGGATTaGCATCGCATTGGAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IAENMFPTLLRPAHRPLCGGPED*HRIGAA Trigger: AGCTGCTCCAATGCGATGCAAATCCTCTGGGCCTCC...GCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| CDS GCA 90 bp | ATCCATGGACAGGAAGAAGTGCTGTGCTATGGTGTCTGCTACAGGTaGAAAGCTGAGCCAAAGCATCGCATTGGAGCAGCTCAGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: IHGQEEVLCYGVCYR*KAEPKHRIGAAQEA Trigger: AGCCTCCTGAGCTGCTCCAATGCGATGCTTTGGCTCAGCTTTGCACCTGTAGCAGACACCATAGCACAGCACTTCTTCCTGTCCATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | TTGCAGAGAATATGTTCCCTACTCTACTCAGACCAGCTCACCGCCCTCTGTGCTCTCTCTGAAGTAGAGTaGGCAGCCCCTGTGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQRICSLLYSDQLTALCALSEVE*AAPVDG Trigger: ACCATCCACAGGGGCTGCCAACTCTACTTCAGAGAG...AGCACAGAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS GCA 90 bp | GTTGACCTGATCCATGGACAGGAAGAAGTGCTGTGCTATGGTGTCTaGTACAGGTGCAAAGCTGAGCCAAAGCATCGCATTGGAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDLIHGQEEVLCYGV*YRCKAEPKHRIGAA Trigger: AGCTGCTCCAATGCGATGCTTTGGCTCAGCTTTGCACCTGTAGCAGACACCATAGCACAGCACTTCTTCCTGTCCATGGATCAGGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS GCA 90 bp | TCGCTCCACGGAGGCCAACAGAGTCCAGAACCCAGATGGCAGCCATaGCAAATGGGATGGATAACACAAAGTATATTAGTGACAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLHGGQQSPEPRWQP*QMGWITQSILVTAS Trigger: ACTGGCTGTCACTAATATACTTTGTGTTATCCATCCCATTTGGCATGGCTGCCATCTGGGTTCTGGACTCTGTTGGCCTCCGTGGAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | TACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATGCCAGGAACCCCATTCTGAATGTCCTTaGGAGACAGAAGCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLVIQWRQVLLPVLCQEPHSECP*ETEAGP Trigger: TGGCCCTGCTTCTGTCTCCAAAGGACATTCAGAATG...GGGTTCCTGGCATAAGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | CTCTGTGCTATTTTACAATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTAGCCAAAGCATCGCATaGGAGCAGCTCAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCAILQSSSVPGHTVETSSQSIA*EQLRRL Trigger: CAGCCTCCTGAGCTGCTCCAATGCGATGCTTTGGCT...ACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGATTGTAAAATAGCACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS-3UTR CAA 90 bp | ATCAAGCTCAGTACCTGGTCATACAGTGGAGACAAGTTCTTCTCCCAGTCTTATAGGATTTGCATCGCATaGGAGCAGCTCAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKLSTWSYSGDKFFSQSYRICIA*EQLRRL Trigger: CAGCCTCCTGAGCTGCTCCAATGCGATGCAAATCCT...ATAAGACTGGGAGAAGAACTTGTCTCCACTGTATGACCAGGTACTGAGCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| CDS TCA 90 bp | AATGGGATGGATAACACAAAGTATATTAGTGACAGCCAGTTGACCTaGTCCATGGACAGGAAGAAGTGCTGTGCTATGGTGTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: NGMDNTKYISDSQLT*SMDRKKCCAMVSAT Trigger: TGTAGCAGACACCATAGCACAGCACTTCTTCCTGTCCATGGATCAGGTCAACTGGCTGTCACTAATATACTTTGTGTTATCCATCCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS CCA 72 bp | CTGATGCTCTGGAAACCACAAGGCAGCCAGCTTGGCTaGAGAAGAGACGACCAGGGTCTGGGCCAGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LMLWKPQGSQLG*RRDDQGLGQGT Trigger: TGTGCCCTGGCCCAGACCCTGGTCGTCTCTTCTCCAGCCAAGCTGGCTGCCTTGTGGTTTCCAGAGCATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS CAA 90 bp | GCTATGGTGTCTGCTACAGGTGCAAAGCTGAGCCAAAGCATCGCATaGGAGCAGCTCAGGAGGCTGACCACCAGCAGAAAGACCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: AMVSATGAKLSQSIA*EQLRRLTTSRKTQR Trigger: TCGCTGGGTCTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCTCCAATGCGATGCTTTGGCTCAGCTTTGCACCTGTAGCAGACACCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS TCA 72 bp | AGTGCTGTGCTATGGTGTCTGCTACAGGTGCAAAGCTaGGCCAAAGCATCGCATTGGAGCAGCTCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAVLWCLLQVQS*AKASHWSSSGG Trigger: GCCTCCTGAGCTGCTCCAATGCGATGCTTTGGCTCAGCTTTGCACCTGTAGCAGACACCATAGCACAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS CAA 72 bp | TCTGCTACAGGTGCAAAGCTGAGCCAAAGCATCGCATaGGAGCAGCTCAGGAGGCTGACCACCAGCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SATGAKLSQSIA*EQLRRLTTSRK Trigger: CTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCTCCAATGCGATGCTTTGGCTCAGCTTTGCACCTGTAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS CAA 90 bp | AGACAGCACATTTGCAATAAGGAGGCCCAGAGGATTTGCATCGCATaGGAGCAGCTCAGGAGGCTGACCACCAGCAGAAAGACCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RQHICNKEAQRICIA*EQLRRLTTSRKTQR Trigger: TCGCTGGGTCTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCTCCAATGCGATGCAAATCCTCTGGGCCTCCTTATTGCAAATGTGCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| CDS CAA 72 bp | ATTTGCAATAAGGAGGCCCAGAGGATTTGCATCGCATaGGAGCAGCTCAGGAGGCTGACCACCAGCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ICNKEAQRICIA*EQLRRLTTSRK Trigger: CTTTCTGCTGGTGGTCAGCCTCCTGAGCTGCTCCAATGCGATGCAAATCCTCTGGGCCTCCTTATTGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238510.2 |
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| CDS TCA 72 bp | AGACAGCACATTTGCAATAAGGAGGCCCAGAGGATTTaGCATGGTGCTGATCATGTTAGCTGTGGCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQHICNKEAQRI*HGADHVSCGSL Trigger: CAGCGAGCCACAGCTAACATGATCAGCACCATGTCAAATCCTCTGGGCCTCCTTATTGCAAATGTGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS GCA 72 bp | GGAGGCCAACAGAGTCCAGAACCCAGATGGCAGCCATaGCAAATGGGATGGATAACACAAAGTATATTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGQQSPEPRWQP*QMGWITQSILV Trigger: CACTAATATACTTTGTGTTATCCATCCCATTTGGCATGGCTGCCATCTGGGTTCTGGACTCTGTTGGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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| CDS TCA 72 bp | GATAACACAAAGTATATTAGTGACAGCCAGTTGACCTaGTCCATGGACAGGAAGAAGTGCTGTGCTATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DNTKYISDSQLT*SMDRKKCCAMV Trigger: CACCATAGCACAGCACTTCTTCCTGTCCATGGATCAGGTCAACTGGCTGTCACTAATATACTTTGTGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031455.5 |
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