Pregenerated sensors for MFSD6L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048329Ensembl transcript IDs: ENSMUST00000053211.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TACAAAATAAAATCATGCAGCGAGCAGATCCTGCTGTaGCTTTGGCATAGACATGGCTTCTTCTCCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: YKIKSCSEQILL*LWHRHGFFSKA Trigger: AGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCTCGCTGCATGATTTTATTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCACGAGTCCTTGCATCCGTGAGTGCTGTCCTCCATCAGCGTGCTCTCACGCCTGGGAGGTTGGGTaGTCCAGACCCCTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QGTSPCIRECCPPSACSHAWEVG*SRPLGR Trigger: CCTACCCAGGGGTCTGGAGCACCCAACCTCCCAGGC...GTGAGAGCACGCTGATGGAGGACAGCACTCACGGATGCAAGGACTCGTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGGCCAGGTCCTCTATaGAGGCCCCCACAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: AFGIDMASSPRLPAVQGTRPGPL*RPPQPT Trigger: GGTGGGCTGTGGGGGCCTCCATAGAGGACCTGGCCT...CGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | CATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGGGGCTCTGGTGTGCCTaGTGCCTGGGAGGTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HRHGFFSKAPCSAGHESLGLWCA*CLGGWV Trigger: CACCCAACCTCCCAGGCAGCAGGCACACCAGAGCCC...CAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGTCCAGGGCTCTGGTGTaGCTGCTGCCTGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AFGIDMASSPRLPAVQGTSRALV*LLPGRL Trigger: CAACCTCCCAGGCAGCAGGCACACCAGAGCCCTGGA...CGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCACGAGTCCTTGCATCCGTGAGTGCTGTCCTCCATCAGCGTGCTCTCACCCCTTCCAGTCGGAGTaGTCCTCCCTCATGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGTSPCIRECCPPSACSHPFQSE*SSLMAF Trigger: GAAGGCCATGAGGGAGGAGCACTCCGACTGGAAGGG...GTGAGAGCACGCTGATGGAGGACAGCACTCACGGATGCAAGGACTCGTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGGGACCATCAGGAGGCTaGCGCCTGCGGAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HRHGFFSKAPCSAGHESLGPSGG*RLRSSA Trigger: TGCTGAGCTCCGCAGGCGCCAGCCTCCTGATGGTCC...CAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGGTGCTTGGTTCCCATaGGGATGCCCACCAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHGAWFP*GCPPRA Trigger: CGCCCTTGGTGGGCATCCTCATGGGAACCAAGCACC...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | ATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCCTCTGGTGTGCCTGCTaGCTGGGAGGTTGGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: IDMASSPRLPAVQGTSPCLWCAC*LGGWVL Trigger: GAGCACCCAACCTCCCAGGCAGCAGGCACACCAGAG...GCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCACGAGTCCTTGCATCCGTGAGTGCTGTCCTCCATCAGCGTGCTCTCACTCACCAGCTCACTGCTaGCGTGGTCCTTCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QGTSPCIRECCPPSACSHSPAHC*RGPSCA Trigger: GGCACATGAAGGACCACGGCAGCAGTGAGCTGGTGA...GTGAGAGCACGCTGATGGAGGACAGCACTCACGGATGCAAGGACTCGTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCACGAGTCCTTGCATCCGTGAGTGCTGTCCTCCATCAGCGTGCTCTCACGGTGCTCCAGACCCCTaGGTAGGGGTCATGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGTSPCIRECCPPSACSHGAPDP*VGVMIT Trigger: TGTGATCATGACCCCTACCCAGGGGTCTGGAGCACC...GTGAGAGCACGCTGATGGAGGACAGCACTCACGGATGCAAGGACTCGTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGGGTGTGCCTGCTGCCTaGGAGGTTGGGTGCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LCLWHRHGFFSKAPCSAGGVPAA*EVGCSR Trigger: TCTGGAGCACCCAACCTCCCAGGCAGCAGGCACACC...CCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGGCAGCCTGGGCTGGATaGACAGGAACAAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LCLWHRHGFFSKAPCSAGAAWAG*TGTRPA Trigger: GGCTGGCCTTGTTCCTGTCCATCCAGCCCAGGCTGC...CCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | AGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCATGACCCTTTCGAGGAGTaGTCAGGGGTCTGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RHGFFSKAPCSAGHESLHDPFEE*SGVWVS Trigger: GGACACCCAGACCCCTGATCACTCCTCGAAAGGGTC...ATGCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACAAGCCAGTCCCCTTCTaGCCCCTGCTCGGAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHKPVPF*PLLGVT Trigger: AGTGACTCCGAGCAGGGGTCAGAAGGGGACTGGCTT...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACATGCCCCACCAAGGCTaGGATGCCACACACACCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHMPHQG*DATHTC Trigger: GCAGGTGTGTGTGGCATCGCAGCCTTGGTGGGGCAT...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | AGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCATGCTCTTGGGGCAGCCTaGGCTGGATGGACAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RHGFFSKAPCSAGHESLHALGAA*AGWTGT Trigger: TGTTCCTGTCCATCCAGCCCAGGCTGCCCCAAGAGC...ATGCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGGGGCTTTGACAAGTTaGCGGGACCTCCAAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHGALTS*RDLQEL Trigger: CAGCTCTTGGAGGTCCCGTCAACTTGTCAAAGCCCC...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | AGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCATAGGAGGCATTCCAGATaGCCCACCAAGGCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: RHGFFSKAPCSAGHESLHRRHSR*PTKAAM Trigger: CATCGCAGCCTTGGTGGGGCATCTGGAATGCCTCCT...ATGCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCGAAAGTCCTGCACAGTaGTGGCAGTGGCTCCTATCC | + |
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Preference number: 4 (lower is better) Translates to: WHRHGFFSKAPCSAGHESESPAQ*WQWLLS Trigger: GGATAGGAGCCACTGCCAGCACTGTGCAGGACTTTC...GGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCGACCCCGGAACATGGTaGCCAGAGACCTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: EQILLCLWHRHGFFSKAPDPGTW*PETSPS Trigger: GGATGGAGAGGTCTCTGGGCACCATGTTCCGGGGTC...GGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | ATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCAGTGCTCCTCCCTCATaGCCTTCACAAGCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: IDMASSPRLPAVQGTSPCSAPPS*PSQASP Trigger: GGGACTGGCTTGTGAAGGCCATGAGGGAGGAGCACT...GCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | TGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCGCAGCTTTGAGTAGTTaGTCCTCTGCTCTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WHRHGFFSKAPCSAGHESAALSS*SSALGA Trigger: TGCCCCAAGAGCAGAGGATCAACTACTCAAAGCTGC...GGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACATTTCTGTCCACCGGTaGGACGAGGACCATCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHISVHR*DEDHQE Trigger: CTCCTGATGGTCCTCGTCCCACCGGTGGACAGAAAT...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGGTCTGGGTGTCCCCCTaGGGCTTTGACAAGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: SCCAFGIDMASSPRLPAVVWVSP*GFDKLT Trigger: CGTCAACTTGTCAAAGCCCCAGGGGGACACCCAGAC...CACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | ATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCCTGGGCCCCTGTTGCTaGTCTATGGGAACAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: IDMASSPRLPAVQGTSPCLGPCC*SMGTGK Trigger: CTTTCCTGTTCCCATAGACCAGCAACAGGGGCCCAG...GCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | AGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCATAGCTCACTGCTGCCGTaGTCCTTCATGTGCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RHGFFSKAPCSAGHESLHSSLLP*SFMCQN Trigger: GTTCTGGCACATGAAGGACCACGGCAGCAGTGAGCT...ATGCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTTGATCCTCTGCTCTTaGGGCAGCCTGGGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: EQILLCLWHRHGFFSKAPLILCS*GSLGWM Trigger: CATCCAGCCCAGGCTGCCCCAAGAGCAGAGGATCAA...GGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCCTCCCAAGGAGAGGATaGAAGTCCACGGTGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: EQILLCLWHRHGFFSKAPLPRRG*KSTVTL Trigger: AAGGGTCACCGTGGACTTTCATCCTCTCCTTGGGAG...GGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACCAGGTAGCGATCAGGTaGTTGGTTCCCATGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHQVAIR*LVPMRM Trigger: CATCCTCATGGGAACCAAGCACCTGATCGCTACCTG...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTCTGCTCCAGAGGGGCTaGCAGGAGTTCCCAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: ILLCLWHRHGFFSKAPCSLLQRG*QEFPEY Trigger: GTATTCTGGGAACTCCTGGCAGCCCCTCTGGAGCAG...ACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACCCGTGGTCCTTCATGTaGCAGAACAGAAAGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLWHRHGFFSKAPCSAGHPWSFM*QNRKSC Trigger: GCAGGACTTTCTGTTCTGGCACATGAAGGACCACGG...GTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGCCATCACCAGCTCACTaGTGCCGTGGTCCTTCATGT | + |
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Preference number: 4 (lower is better) Translates to: CCAFGIDMASSPRLPAVQPSPAH*CRGPSC Trigger: ACATGAAGGACCACGGCAGCAGTGAGCTGGTGATGG...CTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGTTTTCTGGTAGCGTTTaGCCAGGAAGGCACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AFGIDMASSPRLPAVQGTFSGSV*PGRHRR Trigger: CCTTCTGTGCCTTCCTGGCCAAACGCTACCAGAAAA...CGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCCTGTTGCTGGTCTATaGGAACAGGAAAGGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCLWHRHGFFSKAPCSAGPVAGL*EQERQC Trigger: GCACTGCCTTTCCTGTTCCCATAGACCAGCAACAGG...CCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | ATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTAGTGACCCCGGAACATaGTGCCCAGAGACCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILLCLWHRHGFFSKAPCSSDPGT*CPETSP Trigger: TGGAGAGGTCTCTGGGCACCATGTTCCGGGGTCACT...ACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTCAAGCTGAGAGCCACTaGGAAACCCATCACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILLCLWHRHGFFSKAPCSQAESH*ETHHQL Trigger: GAGCTGGTGATGGGTTTCTCAGTGGCTCTCAGCTTG...ACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGTTTCTCCTAGCAAGCTaGGAGCCACTGAGAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LCLWHRHGFFSKAPCSAGFLLAS*EPLRNP Trigger: TGGGTTTCTCAGTGGCTCTCAGCTTGCTAGGAGAAA...CCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTCCACCAAGGCTGCGATaGCACACACACCTGCTGATA | + |
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Preference number: 4 (lower is better) Translates to: ILLCLWHRHGFFSKAPCSPPRLR*HTHLLI Trigger: TATCAGCAGGTGTGTGTGGCATCGCAGCCTTGGTGG...ACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | AGCAGATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGAACAGGAAAGGCAGTaGTCACTGCTAAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SRSCCAFGIDMASSPRLPEQERQ*SLLRPG Trigger: CCCTGGCCTTAGCAGTGAGCACTGCCTTTCCTGTTC...AGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR TCA 90 bp | CATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGACCACCAGCTCCAGATaGAAGCATAGTAAAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: HRHGFFSKAPCSAGHESLTTSSR*KHSKAP Trigger: AGGTGCTTTACTATGCTTTCATCTGGAGCTGGTGGT...CAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTGGTGGCCACTCTACTaGTTCCATTACAAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: WHRHGFFSKAPCSAGHESWWPLY*FHYKSG Trigger: ACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCA...GGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR GCA 90 bp | TACTACAAAATAAAATCATGCAGCGAGCAGATCCTGCTGTGCCTTTGGCATAGAAGCCCCCGACAAAGCTaGCTAGGCTGCAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YYKIKSCSEQILLCLWHRSPRQS*LGCSRS Trigger: GGAGCGGCTGCAGCCTAGGCAGCTTTGTCGGGGGCT...TCTATGCCAAAGGCACAGCAGGATCTGCTCGCTGCATGATTTTATTTTGTAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | CATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGTCCTTCAGATCCATTTaGAAAGCCAGAAGTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRHGFFSKAPCSAGHESLSFRSI*KARSVQ Trigger: CTGGACACTTCTGGCTTTCCAAATGGATCTGAAGGA...CAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGCTTCCATTACAAAAGTaGTTGACCAGATTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AFGIDMASSPRLPAVQGTLPLQK*LTRFLS Trigger: GGACAGAAATCTGGTCAACCACTTTTGTAATGGAAG...CGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | ATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCTCAAAAGTCCCTTTCTaGGAATTATCTCTCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: IDMASSPRLPAVQGTSPCSKVPF*ELSLNP Trigger: TGGGTTGAGAGATAATTCCCAGAAAGGGACTTTTGA...GCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CCA 90 bp | TACTACAAAATAAAATCATGCAGCGAGCAGATCCTGCTGTGCCTTTGGCATAGACCAGAAGTGACAAGATaGAGGCCTTGTGTAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YYKIKSCSEQILLCLWHRPEVTR*RPCVVV Trigger: GACCACTACACAAGGCCTCCATCTTGTCACTTCTGG...TCTATGCCAAAGGCACAGCAGGATCTGCTCGCTGCATGATTTTATTTTGTAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | GTCAGGAACGGAGTCACACAGGCATCCCGGACTCCGCACACCAAGTaGAAGAGCCTGGCCACCCGTAGTGCCCTGGGGACGTCCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRNGVTQASRTPHTK*KSLATRSALGTSHC Trigger: GCAATGGGACGTCCCCAGGGCACTACGGGTGGCCAGGCTCTTCCACTTGGTGTGCGGAGTCCGGGATGCCTGTGTGACTCCGTTCCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 90 bp | GGTCCTCTATGGAGGCCCCCACAGCCCACCAAAGAGCCCCACTGCTaGTGGTGCTCAGGATCTGAACAGGGAGGACGGACCACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPLWRPPQPTKEPHC*WCSGSEQGGRTTSS Trigger: GGAGCTGGTGGTCCGTCCTCCCTGTTCAGATCCTGAGCACCATCAGCAGTGGGGCTCTTTGGTGGGCTGTGGGGGCCTCCATAGAGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | TTGGCCAGGAAGGCACAGAAGGGAATCCAGCAGGTAGCGATCAGGTaGTTGGTTCCCATGAGGATGCCCACCAAGGGCGCGGCCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LARKAQKGIQQVAIR*LVPMRMPTKGAATP Trigger: GGGTGTGGCCGCGCCCTTGGTGGGCATCCTCATGGGAACCAAGCACCTGATCGCTACCTGCTGGATTCCCTTCTGTGCCTTCCTGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | TGCCTAGGCTGCAGCCGCTCCCATAAAAGTGACCCCGGAACATGGTaGCCAGAGACCTCTCCATCCCGGAGAAGGCCAGGTCCTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: CLGCSRSHKSDPGTW*PETSPSRRRPGPLW Trigger: CCATAGAGGACCTGGCCTTCTCCGGGATGGAGAGGTCTCTGGGCACCATGTTCCGGGGTCACTTTTATGGGAGCGGCTGCAGCCTAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | AGCTGCCTAGGCTGCAGCCGCTCCCATAAAAGTGACCCCGGAACATaGTGCCCAGAGACCTCTCCATCCCGGAGAAGGCCAGGTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SCLGCSRSHKSDPGT*CPETSPSRRRPGPL Trigger: TAGAGGACCTGGCCTTCTCCGGGATGGAGAGGTCTCTGGGCACCATGTTCCGGGGTCACTTTTATGGGAGCGGCTGCAGCCTAGGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CAA 90 bp | AGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGCATCGCGGCCACACCCAGTaGCCTCAGGTAGAGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHGFFSKAPCSAGHESLHRGHTQ*PQVEGQ Trigger: CTGACCCTCTACCTGAGGCAACTGGGTGTGGCCGCG...ATGCAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | AGAAGTGTCCAGGGCTCTGGTGTGCCTGCTGCCTGGGAGGTTGGGTaGTCCAGACCCCTGGGTAGGGGTCATGATCACAGTTTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSVQGSGVPAAWEVG*SRPLGRGHDHSLCD Trigger: GTCACACAAACTGTGATCATGACCCCTACCCAGGGGTCTGGAGCACCCAACCTCCCAGGCAGCAGGCACACCAGAGCCCTGGACACTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | TGCTCCTCCCTCATGGCCTTCACAAGCCAGTCCCCTTCTGACCCCTaGTCGGAGTCACTGGAGTCACTCCCTCCCATAGCTAGCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: CSSLMAFTSQSPSDP*SESLESLPPIASSF Trigger: AAAGCTGCTAGCTATGGGAGGGAGTGACTCCAGTGACTCCGAGCAGGGGTCAGAAGGGGACTGGCTTGTGAAGGCCATGAGGGAGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CAA 90 bp | CATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGTCCTTGGTAGCGATCAGGTGCTaGGTTCCCATGAGGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRHGFFSKAPCSAGHESLVAIRC*VPMRMP Trigger: GGGCATCCTCATGGGAACCAAGCACCTGATCGCTAC...CAAGGACTCGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 90 bp | TTCCCAGAATACAACAACTCCCAAGGAGAGGATGAAAGTCCACGGTaGCCCTTTCGAGGAGTGATCAGGGGTCTGGGTGTCCCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPEYNNSQGEDESPR*PFRGVIRGLGVPLG Trigger: CCCCAGGGGGACACCCAGACCCCTGATCACTCCTCGAAAGGGTCACCGTGGACTTTCATCCTCTCCTTGGGAGTTGTTGTATTCTGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | AGCTCACTGCTGCCGTGGTCCTTCATGTGCCAGAACAGAAAGTCCTaGACAGTGCTGGCAGTGGCTCCTATCCAAAAGACAGTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLPWSFMCQNRKS*TVLAVAPIQKTVKA Trigger: GGCCTTCACTGTCTTTTGGATAGGAGCCACTGCCAGCACTGTGCAGGACTTTCTGTTCTGGCACATGAAGGACCACGGCAGCAGTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | GCCAAAGCAACAGGACCACACAACAGGCTTCGTAGAGCACAGCTATaGCGAAGTGCAGAACTACAAAGCCCCCGACAAAGCTGCCTAGGC | + |
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Preference number: 5 (lower is better) Translates to: AKATGPHNRLRRAQL*RSAELQSPRQSCLG Trigger: GCCTAGGCAGCTTTGTCGGGGGCTTTGTAGTTCTGCACTTCGGCATAGCTGTGCTCTACGAAGCCTGTTGTGTGGTCCTGTTGCTTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | AAGCTGAGAGCCACTGAGAAACCCATCACCAGCTCACTGCTGCCGTaGTCCTTCATGTGCCAGAACAGAAAGTCCTGCACAGTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLRATEKPITSSLLP*SFMCQNRKSCTVLA Trigger: TGCCAGCACTGTGCAGGACTTTCTGTTCTGGCACATGAAGGACCACGGCAGCAGTGAGCTGGTGATGGGTTTCTCAGTGGCTCTCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CAA 90 bp | AGCAGATCCTGCTGTGCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTTGGGGCTTTGACAAGTaGACGGGACCTCCAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSCCAFGIDMASSPRLPWGFDK*TGPPRA Trigger: AGCTCTTGGAGGTCCCGTCAACTTGTCAAAGCCCCA...AGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS-3UTR CAA 90 bp | GCCTTTGGCATAGACATGGCTTCTTCTCCAAGGCTCCCTGCAGTGCAGGGCACGAGATTCAGGGTAACATaGCCTACCTCAAAAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFGIDMASSPRLPAVQGTRFRVT*PTSKVP Trigger: AGGGACTTTTGAGGTAGGCAATGTTACCCTGAATCT...CGTGCCCTGCACTGCAGGGAGCCTTGGAGAAGAAGCCATGTCTATGCCAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 90 bp | CAGGTATTCATAAAGACTGTCATCCGCCACCTGCTCCAGAGGGGCTaGCAGGAGTTCCCAGAATACAACAACTCCCAAGGAGAGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVFIKTVIRHLLQRG*QEFPEYNNSQGEDE Trigger: TTCATCCTCTCCTTGGGAGTTGTTGTATTCTGGGAACTCCTGGCAGCCCCTCTGGAGCAGGTGGCGGATGACAGTCTTTATGAATACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | AGCGGTAAGATAGTGGTGGCCACTCTACTGCTTCCATTACAAAAGTaGTTGACCAGATTTCTGTCCACCGGTGGGACGAGGACCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKIVVATLLLPLQK*LTRFLSTGGTRTIR Trigger: CCTGATGGTCCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCACTATCTTACCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | AAAGTCCCTTTCTGGGAATTATCTCTCAACCCAGAAGTGACAAGATaGAGGCCTTGTGTAGTGGTCCTGGCTCCTTCAACAGAGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVPFWELSLNPEVTR*RPCVVVLAPSTEPT Trigger: AGTGGGCTCTGTTGAAGGAGCCAGGACCACTACACAAGGCCTCCATCTTGTCACTTCTGGGTTGAGAGATAATTCCCAGAAAGGGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 90 bp | ACACCCACCCTAGACAGTTTCCTTAGCAACGAAGTTCTGAACGGGTaGAACAGAATTTCTCCTAGCAAGCTGAGAGCCACTGAGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: TPTLDSFLSNEVLNG*NRISPSKLRATEKP Trigger: GGGTTTCTCAGTGGCTCTCAGCTTGCTAGGAGAAATTCTGTTTCACCCGTTCAGAACTTCGTTGCTAAGGAAACTGTCTAGGGTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | ATACACCTAACAGTTTCCACACCCACAGGTCTCTGTTCCGATCAGTaGCGTCTACGAAATCCAGGTATTCATAAAGACTGTCATCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHLTVSTPTGLCSDQ*RLRNPGIHKDCHPP Trigger: TGGCGGATGACAGTCTTTATGAATACCTGGATTTCGTAGACGCCACTGATCGGAACAGAGACCTGTGGGTGTGGAAACTGTTAGGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 90 bp | GGAAGTAGATTCAGGGTAACATTGCCTACCTCAAAAGTCCCTTTCTaGGAATTATCTCTCAACCCAGAAGTGACAAGATGGAGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSRFRVTLPTSKVPF*ELSLNPEVTRWRPC Trigger: ACAAGGCCTCCATCTTGTCACTTCTGGGTTGAGAGATAATTCCCAGAAAGGGACTTTTGAGGTAGGCAATGTTACCCTGAATCTACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | GGAGTCACACAGGCATCCCGGACTCCGCACACCAAGTaGAAGAGCCTGGCCACCCGTAGTGCCCTGGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GVTQASRTPHTK*KSLATRSALGT Trigger: CGTCCCCAGGGCACTACGGGTGGCCAGGCTCTTCCACTTGGTGTGCGGAGTCCGGGATGCCTGTGTGACTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | GAGACCTCTCCATCCCGGAGAAGGCCAGGTCCTCTATaGAGGCCCCCACAGCCCACCAAAGAGCCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: ETSPSRRRPGPL*RPPQPTKEPHC Trigger: GCAGTGGGGCTCTTTGGTGGGCTGTGGGGGCCTCCATAGAGGACCTGGCCTTCTCCGGGATGGAGAGGTCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 90 bp | CTTGGTTCCCATGAGGATGCCCACCAAGGGCGCGGCCACACCCAGTaGCCTCAGGTAGAGGGTCAGGAACGGAGTCACACAGGCATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGSHEDAHQGRGHTQ*PQVEGQERSHTGIP Trigger: CGGGATGCCTGTGTGACTCCGTTCCTGACCCTCTACCTGAGGCAACTGGGTGTGGCCGCGCCCTTGGTGGGCATCCTCATGGGAACCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 90 bp | GCCAGGAAGGCACAGAAGGGAATCCAGCAGGTAGCGATCAGGTGCTaGGTTCCCATGAGGATGCCCACCAAGGGCGCGGCCACACCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARKAQKGIQQVAIRC*VPMRMPTKGAATPS Trigger: ACTGGGTGTGGCCGCGCCCTTGGTGGGCATCCTCATGGGAACCAAGCACCTGATCGCTACCTGCTGGATTCCCTTCTGTGCCTTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 72 bp | CATGAGGATGCCCACCAAGGGCGCGGCCACACCCAGTaGCCTCAGGTAGAGGGTCAGGAACGGAGTCACACA | + |
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Preference number: 6 (lower is better) Translates to: HEDAHQGRGHTQ*PQVEGQERSHT Trigger: TGTGTGACTCCGTTCCTGACCCTCTACCTGAGGCAACTGGGTGTGGCCGCGCCCTTGGTGGGCATCCTCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | AAGGCACAGAAGGGAATCCAGCAGGTAGCGATCAGGTaGTTGGTTCCCATGAGGATGCCCACCAAGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: KAQKGIQQVAIR*LVPMRMPTKGA Trigger: CGCGCCCTTGGTGGGCATCCTCATGGGAACCAAGCACCTGATCGCTACCTGCTGGATTCCCTTCTGTGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | CTCATGGCCTTCACAAGCCAGTCCCCTTCTGACCCCTaGTCGGAGTCACTGGAGTCACTCCCTCCCATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LMAFTSQSPSDP*SESLESLPPIA Trigger: AGCTATGGGAGGGAGTGACTCCAGTGACTCCGAGCAGGGGTCAGAAGGGGACTGGCTTGTGAAGGCCATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | CAGATCCATTTGGAAAGCCAGAAGTGTCCAGGGCTCTaGTGTGCCTGCTGCCTGGGAGGTTGGGTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QIHLESQKCPGL*CACCLGGWVLQ Trigger: CTGGAGCACCCAACCTCCCAGGCAGCAGGCACACCAGAGCCCTGGACACTTCTGGCTTTCCAAATGGATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | TGCCGAAGTGCAGAACTACAAAGCCCCCGACAAAGCTaGCTAGGCTGCAGCCGCTCCCATAAAAGTGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: CRSAELQSPRQS*LGCSRSHKSDP Trigger: GGGGTCACTTTTATGGGAGCGGCTGCAGCCTAGGCAGCTTTGTCGGGGGCTTTGTAGTTCTGCACTTCGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 72 bp | CACCAAAGAGCCCCACTGCTGATGGTGCTCAGGATCTaGACAGGGAGGACGGACCACCAGCTCCAGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HQRAPLLMVLRI*TGRTDHQLQMK Trigger: TTTCATCTGGAGCTGGTGGTCCGTCCTCCCTGTTCAGATCCTGAGCACCATCAGCAGTGGGGCTCTTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | CGAGGAGGCATTCCAGATGCCCCACCAAGGCTGCGATaGCACACACACCTGCTGATACACCTAACAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGGIPDAPPRLR*HTHLLIHLTVS Trigger: GGAAACTGTTAGGTGTATCAGCAGGTGTGTGTGGCATCGCAGCCTTGGTGGGGCATCTGGAATGCCTCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 72 bp | GACCATCAGGAGGCTGGCGCCTGCGGAGCTCAGCAATaGGCCAGTCAAAAACATTCTCCTTTTCTGGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: DHQEAGACGAQQ*ASQKHSPFLVA Trigger: CGCTACCAGAAAAGGAGAATGTTTTTGACTGGCTCATTGCTGAGCTCCGCAGGCGCCAGCCTCCTGATGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | GCCACTGAGAAACCCATCACCAGCTCACTGCTGCCGTaGTCCTTCATGTGCCAGAACAGAAAGTCCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ATEKPITSSLLP*SFMCQNRKSCT Trigger: TGTGCAGGACTTTCTGTTCTGGCACATGAAGGACCACGGCAGCAGTGAGCTGGTGATGGGTTTCTCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 72 bp | TACAACAACTCCCAAGGAGAGGATGAAAGTCCACGGTaGCCCTTTCGAGGAGTGATCAGGGGTCTGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YNNSQGEDESPR*PFRGVIRGLGV Trigger: GACACCCAGACCCCTGATCACTCCTCGAAAGGGTCACCGTGGACTTTCATCCTCTCCTTGGGAGTTGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | ATAAAGACTGTCATCCGCCACCTGCTCCAGAGGGGCTaGCAGGAGTTCCCAGAATACAACAACTCCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IKTVIRHLLQRG*QEFPEYNNSQG Trigger: TCCTTGGGAGTTGTTGTATTCTGGGAACTCCTGGCAGCCCCTCTGGAGCAGGTGGCGGATGACAGTCTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS GCA 72 bp | ACAGGACCACACAACAGGCTTCGTAGAGCACAGCTATaGCGAAGTGCAGAACTACAAAGCCCCCGACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGPHNRLRRAQL*RSAELQSPRQS Trigger: GCTTTGTCGGGGGCTTTGTAGTTCTGCACTTCGGCATAGCTGTGCTCTACGAAGCCTGTTGTGTGGTCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | AGTAGCTGTAGAAATAAATCACGCCCTGAGGACCATTaGCCACGAGGAGGCATTCCAGATGCCCCACCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCRNKSRPEDH*PRGGIPDAPPR Trigger: CCTTGGTGGGGCATCTGGAATGCCTCCTCGTGGCCAATGGTCCTCAGGGCGTGATTTATTTCTACAGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 72 bp | GTGGTGGCCACTCTACTGCTTCCATTACAAAAGTGGTaGACCAGATTTCTGTCCACCGGTGGGACGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: VVATLLLPLQKW*TRFLSTGGTRT Trigger: GGTCCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 72 bp | TGGTGGCCACTCTACTGCTTCCATTACAAAAGTGGTTaGCCAGATTTCTGTCCACCGGTGGGACGAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: WWPLYCFHYKSG*PDFCPPVGRGP Trigger: TGGTCCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | GGTCTGCAGACCGCTAAATGTTCCTTCAGATCCATTTaGAAAGCCAGAAGTGTCCAGGGCTCTGGTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLQTAKCSFRSI*KARSVQGSGVP Trigger: AGGCACACCAGAGCCCTGGACACTTCTGGCTTTCCAAATGGATCTGAAGGAACATTTAGCGGTCTGCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 90 bp | GGTAAGATAGTGGTGGCCACTCTACTGCTTCCATTACAAAAGTGGTaGACCAGATTTCTGTCCACCGGTGGGACGAGGACCATCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GKIVVATLLLPLQKW*TRFLSTGGTRTIRR Trigger: CCTCCTGATGGTCCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCACTATCTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | ATAGTGGTGGCCACTCTACTGCTTCCATTACAAAAGTaGTTGACCAGATTTCTGTCCACCGGTGGGACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IVVATLLLPLQK*LTRFLSTGGTR Trigger: CCTCGTCCCACCGGTGGACAGAAATCTGGTCAACCACTTTTGTAATGGAAGCAGTAGAGTGGCCACCACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CAA 72 bp | ATTATCTCTCAACCCAGAAGTGACAAGATGGAGGCCTaGTGTAGTGGTCCTGGCTCCTTCAACAGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IISQPRSDKMEA*CSGPGSFNRAH Trigger: GTGGGCTCTGTTGAAGGAGCCAGGACCACTACACAAGGCCTCCATCTTGTCACTTCTGGGTTGAGAGATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | TTCTGGGAATTATCTCTCAACCCAGAAGTGACAAGATaGAGGCCTTGTGTAGTGGTCCTGGCTCCTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: FWELSLNPEVTR*RPCVVVLAPST Trigger: TGTTGAAGGAGCCAGGACCACTACACAAGGCCTCCATCTTGTCACTTCTGGGTTGAGAGATAATTCCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | ACAGTTTCCACACCCACAGGTCTCTGTTCCGATCAGTaGCGTCTACGAAATCCAGGTATTCATAAAGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: TVSTPTGLCSDQ*RLRNPGIHKDC Trigger: ACAGTCTTTATGAATACCTGGATTTCGTAGACGCCACTGATCGGAACAGAGACCTGTGGGTGTGGAAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS TCA 72 bp | CTAGACAGTTTCCTTAGCAACGAAGTTCTGAACGGGTaGAACAGAATTTCTCCTAGCAAGCTGAGAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LDSFLSNEVLNG*NRISPSKLRAT Trigger: AGTGGCTCTCAGCTTGCTAGGAGAAATTCTGTTTCACCCGTTCAGAACTTCGTTGCTAAGGAAACTGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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| CDS CCA 72 bp | TTCAGGGTAACATTGCCTACCTCAAAAGTCCCTTTCTaGGAATTATCTCTCAACCCAGAAGTGACAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: FRVTLPTSKVPF*ELSLNPEVTRW Trigger: CCATCTTGTCACTTCTGGGTTGAGAGATAATTCCCAGAAAGGGACTTTTGAGGTAGGCAATGTTACCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053211.8 |
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