Pregenerated sensors for MFSD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045665Ensembl transcript IDs: ENSMUST00000051341.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CTGCAGGACAGAGTCACAAAGCAAGTCATGGGTAGGTaGGTGTGTTCCAGAGCCCATCTCAGACCCCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LQDRVTKQVMGR*VCSRAHLRPLV Trigger: GACAAGGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCTGTCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| 3UTR GCA 72 bp | ATGTCCTTCCCAATACAGAGCACTGGCAAGAGGGGCTaGAGGACAGAGTCACAAAGCAAGTCATGGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: MSFPIQSTGKRG*RTESQSKSWVG Trigger: ACCTACCCATGACTTGCTTTGTGACTCTGTCCTGCAGCCCCTCTTGCCAGTGCTCTGTATTGGGAAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| 3UTR CCA 72 bp | TACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTaGCACCTTTCCAGTCTGTCACCCCCATGTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: YTARRREYTVSF*HLSSLSPPCPS Trigger: GGAAGGACATGGGGGTGACAGACTGGAAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | AGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCCTTGTCCGGACAGCCCACCGAGTaGTCGGCCCACCAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SKSWVGGCVPEPISDPLSGQPTE*SAHQQH Trigger: GTGCTGCTGGTGGGCCGAGCACTCGGTGGGCTGTCC...GGACAAGGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | CTGTCACCCCCATGTCCTTCCCAATACAGAGCACTGGCAAGAGGGGCTGCAGGAGGCAGCCACAAAGGGTaGGACCGGCCCCAGCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: LSPPCPSQYRALARGAAGGSHKG*DRPQPY Trigger: ATAGGGCTGGGGCCGGTCGCACCCTTTGTGGCTGCC...TCCTGCAGCCCCTCTTGCCAGTGCTCTGTATTGGGAAGGACATGGGGGTGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | CTGTCACCCCCATGTCCTTCCCAATACAGAGCACTGGCAAGAGGGGCTGCAGGAGGAAGGAGGGGTTGCTaGAAGCTCTTCCAGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSPPCPSQYRALARGAAGGRRGC*KLFQGA Trigger: GGCCCCCTGGAAGAGCTTGCAGCAACCCCTCCTTCC...TCCTGCAGCCCCTCTTGCCAGTGCTCTGTATTGGGAAGGACATGGGGGTGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | ATACAGAGCACTGGCAAGAGGGGCTGCAGGACAGAGTCACAAAGCAAGTCATGGGCCACAGCCAGCACGTaGTTCCAGAAGGCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: IQSTGKRGCRTESQSKSWATAST*FQKAAR Trigger: CCGAGCCGCCTTCTGGAACCACGTGCTGGCTGTGGC...CCATGACTTGCTTTGTGACTCTGTCCTGCAGCCCCTCTTGCCAGTGCTCTGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR TCA 90 bp | AAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCCTTGTCCGTGTCTCACCACGGTaGAGAGTCCTGCCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KQVMGRWVCSRAHLRPLVRVSPR*RVLPLP Trigger: TGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACG...GACAAGGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | AGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCCTTGTCCGAAGGAAGGAGGGGTTaGTGCAAGCTCTTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKSWVGGCVPEPISDPLSEGRRG*CKLFQG Trigger: CCCCTGGAAGAGCTTGCAGCAACCCCTCCTTCCTTC...GGACAAGGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR TCA 90 bp | CAGGACAGAGTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCCTGGCTCTGCATCTTaGCAGCTCCAGACCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QDRVTKQVMGRWVCSRAHPGSAS*QLQTQA Trigger: TGCCTGGGTCTGGAGCTGTCAAGATGCAGAGCCAGG...ATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCTGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | AGAGTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGATCGGGCAAAGGTGGCTaGGATCCACTCGGCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RVTKQVMGRWVCSRAHLRSGKGG*DPLGGE Trigger: TTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGA...TCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGCACTGGCAAGAGGGGCTGCAGGACAGAGTCACAAAGCAAGTCATGGGTCTCCAGCACAGGTCTTaGAGAAGGCACGCTGACGGT | + |
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Preference number: 4 (lower is better) Translates to: TEHWQEGLQDRVTKQVMGLQHRS*RRHADG Trigger: ACCGTCAGCGTGCCTTCTCCAAGACCTGTGCTGGAG...ACCCATGACTTGCTTTGTGACTCTGTCCTGCAGCCCCTCTTGCCAGTGCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | AAGAGGGGCTGCAGGACAGAGTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCACGGTGAAGAGTCCTaGCACTGCCAGCAGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: KRGCRTESQSKSWVGGCVHGEES*HCQQSR Trigger: ACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTG...AACACACCCACCTACCCATGACTTGCTTTGTGACTCTGTCCTGCAGCCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | GACAGAGTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCCTCTTCCAGGGGGCCTaGCTCTGCATCTTGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRVTKQVMGRWVCSRAHLLFQGA*LCILTA Trigger: AGCTGTCAAGATGCAGAGCCAGGCCCCCTGGAAGAG...GAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR GCA 90 bp | CACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCTTTCCAGTCTGTCAGCTGGAGAACACAATaGCCAGTGGGGCTCCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSKEKGVHCQLLAPFQSVSWRTQ*PVGLRV Trigger: CACACGGAGCCCCACTGGGCATTGTGTTCTCCAGCT...GACAGACTGGAAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | CTGTCACCCCCATGTCCTTCCCAATACAGAGCACTGGCAAGAGGGGCTGCAGGAAGGATTTTCTTGGCCTaGGCTGGTGGAGAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSPPCPSQYRALARGAAGRIFLA*AGGESQ Trigger: TTGACTTTCTCCACCAGCCCAGGCCAAGAAAATCCT...TCCTGCAGCCCCTCTTGCCAGTGCTCTGTATTGGGAAGGACATGGGGGTGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR TCA 90 bp | GTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCGAGAGAAGACGACAATaGGGACAGCAAGGGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VTKQVMGRWVCSRAHLRPERRRQ*GQQGKA Trigger: TGCTTTCCCTTGCTGTCCTCATTGTCGTCTTCTCTC...GGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | CACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCTTTCCAGTCTGTCCTCTCCACGTGCTCGTaGATGTACCAGGCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HSKEKGVHCQLLAPFQSVLSTCS*MYQASK Trigger: CTTTGAGGCCTGGTACATCCACGAGCACGTGGAGAG...GACAGACTGGAAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | TCACATCCATTAGAAGTGTTTATTTTTACACAGCAAGGAGAAGGGAGTACACTGCGGCTCGGGCAAAGGTaGCTGGGATCCACTCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SHPLEVFIFTQQGEGSTLRLGQR*LGSTRR Trigger: CCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCG...CAGTGTACTCCCTTCTCCTTGCTGTGTAAAAATAAACACTTCTAATGGATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | AGAGTCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGATCCACAGGATTTTCTTaGCCTGGGCTGGTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RVTKQVMGRWVCSRAHLRSTGFS*PGLVEK Trigger: TTTCTCCACCAGCCCAGGCCAAGAAAATCCTGTGGA...TCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| 3UTR CAA 72 bp | TTACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTaGGCACCTTTCCAGTCTGTCACCCCCATGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LHSKEKGVHCQL*APFQSVTPMSF Trigger: GAAGGACATGGGGGTGACAGACTGGAAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR TCA 90 bp | GTGTTTATTTTTACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCGAAGGCTGGCAGCCATaGAGCTGGAGAACACAATGC | + |
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Preference number: 4 (lower is better) Translates to: VFIFTQQGEGSTLSAFGTEGWQP*SWRTQC Trigger: GCATTGTGTTCTCCAGCTTCATGGCTGCCAGCCTTC...GGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTAAAAATAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | TGTTTATTTTTACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCTAGAAGAGGAGAGCTGTaGACAGCCCACCGAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CLFLHSKEKGVHCQLLAPRRGEL*TAHRVL Trigger: GAGCACTCGGTGGGCTGTCCACAGCTCTCCTCTTCT...AGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTAAAAATAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTTTACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCTTTCCAGGCCTCAAAGGCTaGGAAGAGGAGAGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FIFTQQGEGSTLSAFGTFPGLKG*EEESCG Trigger: TCCACAGCTCTCCTCTTCTCAGCCTTTGAGGCCTGG...AAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CCA 90 bp | TTATTTTTACACAGCAAGGAGAAGGGAGTACACTGTCAGCTTTTGGCACCTTTCTTCCGATCGCTGTCGTaGAGGACAAGGAGCCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LFLHSKEKGVHCQLLAPFFRSLS*RTRSPR Trigger: TCTAGGGCTCCTTGTCCTCCACGACAGCGATCGGAA...GAAAGGTGCCAAAAGCTGACAGTGTACTCCCTTCTCCTTGCTGTGTAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | GGGTGCGACCGGCCCCAGCCCTATCCAACTAGCCACGGCCTCCGCTaGCACACCAGCCGCCACAGCCAGCACGTGGTTCCAGAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GCDRPQPYPTSHGLR*HTSRHSQHVVPEGG Trigger: GCCGCCTTCTGGAACCACGTGCTGGCTGTGGCGGCTGGTGTGGCAGCGGAGGCCGTGGCTAGTTGGATAGGGCTGGGGCCGGTCGCACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | CTAGCCACGGCCTCCGCTGCCACACCAGCCGCCACAGCCAGCACGTaGTTCCAGAAGGCGGCTCGGGCAAAGGTGGCTGGGATCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: LATASAATPAATAST*FQKAARAKVAGIHS Trigger: CGAGTGGATCCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTGCTGGCTGTGGCGGCTGGTGTGGCAGCGGAGGCCGTGGCTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | CAAGGCCCCAGTCAGAGCCAGAAGAGGGATGGCAGCCACAAAGGGTaGGACCGGCCCCAGCCCTATCCAACTAGCCACGGCCTCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QGPSQSQKRDGSHKG*DRPQPYPTSHGLRC Trigger: GCAGCGGAGGCCGTGGCTAGTTGGATAGGGCTGGGGCCGGTCGCACCCTTTGTGGCTGCCATCCCTCTTCTGGCTCTGACTGGGGCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | CCGCCACAGCCAGCACGTGGTTCCAGAAGGCGGCTCGGGCAAAGGTaGCTGGGATCCACTCGGCGGGGAAGTCATGCCTCTCCACGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PPQPARGSRRRLGQR*LGSTRRGSHASPRA Trigger: AGCACGTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTGCTGGCTGTGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | CACAGCCAGCACGTGGTTCCAGAAGGCGGCTCGGGCAAAGGTGGCTaGGATCCACTCGGCGGGGAAGTCATGCCTCTCCACGTGCTCGTG | + |
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Preference number: 5 (lower is better) Translates to: HSQHVVPEGGSGKGG*DPLGGEVMPLHVLV Trigger: CACGAGCACGTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTGCTGGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | GCGGCTCGGGCAAAGGTGGCTGGGATCCACTCGGCGGGGAAGTCATaGCTCTCCACGTGCTCGTGGATGTACCAGGCCTCAAAGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: AARAKVAGIHSAGKS*LSTCSWMYQASKAE Trigger: CTCAGCCTTTGAGGCCTGGTACATCCACGAGCACGTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 90 bp | GTCATGCCTCTCCACGTGCTCGTGGATGTACCAGGCCTCAAAGGCTaGGAAGAGGAGAGCTGTGGACAGCCCACCGAGTGCTCGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: VMPLHVLVDVPGLKG*EEESCGQPTECSAH Trigger: GTGGGCCGAGCACTCGGTGGGCTGTCCACAGCTCTCCTCTTCTCAGCCTTTGAGGCCTGGTACATCCACGAGCACGTGGAGAGGCATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | GGGCACCCGCAACTCAGCGTCGTGTCTCACCACGGTGAAGAGTCCTaGCACTGCCAGCAGAGTCGTCACCATGACGGCAGAGCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: GHPQLSVVSHHGEES*HCQQSRHHDGRADA Trigger: AGCATCTGCTCTGCCGTCATGGTGACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACGACGCTGAGTTGCGGGTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | CGATCGCTGTCGTGGAGGACAAGGAGCCCTAGACAGGCCAGCAAATaGAGGGGCACTCGGAACCAATTGAGAACCCCGGCCTGCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RSLSWRTRSPRQASK*RGTRNQLRTPACSV Trigger: GACAGAGCAGGCCGGGGTTCTCAATTGGTTCCGAGTGCCCCTGCATTTGCTGGCCTGTCTAGGGCTCCTTGTCCTCCACGACAGCGATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | GCTCGTGGATGTACCAGGCCTCAAAGGCTGAGAAGAGGAGAGCTGTaGACAGCCCACCGAGTGCTCGGCCCACCAGCAGCACGAAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: ARGCTRPQRLRRGEL*TAHRVLGPPAARSS Trigger: ACTACTTCGTGCTGCTGGTGGGCCGAGCACTCGGTGGGCTGTCCACAGCTCTCCTCTTCTCAGCCTTTGAGGCCTGGTACATCCACGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | CCCGGCGGTCAGACAGCAGGCAGCGCAGGCCTCCAGCACAGGTCTTaGAGAAGGCACGCTGACGGTCATAATTCTCTCCCCAGTTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: PGGQTAGSAGLQHRS*RRHADGHNSLPSFV Trigger: TACGAAACTGGGGAGAGAATTATGACCGTCAGCGTGCCTTCTCCAAGACCTGTGCTGGAGGCCTGCGCTGCCTGCTGTCTGACCGCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | AAGGTGGCTGGGATCCACTCGGCGGGGAAGTCATGCCTCTCCACGTaGTCGTGGATGTACCAGGCCTCAAAGGCTGAGAAGAGGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: KVAGIHSAGKSCLST*SWMYQASKAEKRRA Trigger: AGCTCTCCTCTTCTCAGCCTTTGAGGCCTGGTACATCCACGAGCACGTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CAA 90 bp | TCACAAAGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCCGCCTGGCTCTGCATCTaGACAGCTCCAGACCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SQSKSWVGGCVPEPISDPAWLCI*TAPDPG Trigger: GCCTGGGTCTGGAGCTGTCAAGATGCAGAGCCAGGC...GGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCTTTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | CCGCAACTCAGCGTCGTGTCTCACCACGGTGAAGAGTCCTGCCACTaGCAGCAGAGTCGTCACCATGACGGCAGAGCAGATGCTAAACAT | + |
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Preference number: 5 (lower is better) Translates to: PQLSVVSHHGEESCH*QQSRHHDGRADAKH Trigger: ATGTTTAGCATCTGCTCTGCCGTCATGGTGACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACGACGCTGAGTTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS-3UTR CAA 90 bp | AGCAAGTCATGGGTAGGTGGGTGTGTTCCAGAGCCCATCTCAGACCCCTTGTCCCTCCACAGGATTTTCTaGGCCTGGGCTGGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SKSWVGGCVPEPISDPLSLHRIF*AWAGGE Trigger: TTCTCCACCAGCCCAGGCCAAGAAAATCCTGTGGAG...GGACAAGGGGTCTGAGATGGGCTCTGGAACACACCCACCTACCCATGACTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 90 bp | GAGAAGACGACAATGAGGACAGCAAGGGAAAGCAGGTGCATGGGCTaGAGGTGGTACCTCTTGGAGGTAGCGATGCGGTACAGCGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: EKTTMRTARESRCMG*RWYLLEVAMRYSEE Trigger: TTCTTCGCTGTACCGCATCGCTACCTCCAAGAGGTACCACCTTCAGCCCATGCACCTGCTTTCCCTTGCTGTCCTCATTGTCGTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | CAGATGCTAAACATATTCCTGGTGCCTGTTTTCCGATCGCTGTCGTaGAGGACAAGGAGCCCTAGACAGGCCAGCAAATGCAGGGGCACT | + |
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Preference number: 5 (lower is better) Translates to: QMLNIFLVPVFRSLS*RTRSPRQASKCRGT Trigger: AGTGCCCCTGCATTTGCTGGCCTGTCTAGGGCTCCTTGTCCTCCACGACAGCGATCGGAAAACAGGCACCAGGAATATGTTTAGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 90 bp | AGACTTGATAGAAGTCTAGTTGAAACTGAAGGAAGGAGGGGTTGCTaGAAGCTCTTCCAGGGGGCCTGGCTCTGCATCTTGACAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLDRSLVETEGRRGC*KLFQGAWLCILTAP Trigger: TGGAGCTGTCAAGATGCAGAGCCAGGCCCCCTGGAAGAGCTTGCAGCAACCCCTCCTTCCTTCAGTTTCAACTAGACTTCTATCAAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 90 bp | AACTCAATAAGTAAAAAGGCAATGAAGGACTCCACAGGATTTTCTTaGCCTGGGCTGGTGGAGAAAGTCAACATGAAGAGAGAGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: NSISKKAMKDSTGFS*PGLVEKVNMKREKT Trigger: CGTCTTCTCTCTCTTCATGTTGACTTTCTCCACCAGCCCAGGCCAAGAAAATCCTGTGGAGTCCTTCATTGCCTTTTTACTTATTGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | GCCTCCGCTGCCACACCAGCCGCCACAGCCAGCACGTaGTTCCAGAAGGCGGCTCGGGCAAAGGTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASAATPAATAST*FQKAARAKVAG Trigger: CCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTGCTGGCTGTGGCGGCTGGTGTGGCAGCGGAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | CACGTGGTTCCAGAAGGCGGCTCGGGCAAAGGTGGCTaGGATCCACTCGGCGGGGAAGTCATGCCTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HVVPEGGSGKGG*DPLGGEVMPLH Trigger: GTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | CCAGCACGTGGTTCCAGAAGGCGGCTCGGGCAAAGGTaGCTGGGATCCACTCGGCGGGGAAGTCATGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PARGSRRRLGQR*LGSTRRGSHAS Trigger: AGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGCCCGAGCCGCCTTCTGGAACCACGTGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | AGGGGTTGCTGCAAGCTCTTCCAGGGGGCCTGGCTCTaGATCTTGACAGCTCCAGACCCAGGCAGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RGCCKLFQGAWL*ILTAPDPGRRP Trigger: TGGCCTCCTGCCTGGGTCTGGAGCTGTCAAGATGCAGAGCCAGGCCCCCTGGAAGAGCTTGCAGCAACCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | AGTCAGAGCCAGAAGAGGGATGGCAGCCACAAAGGGTaGGACCGGCCCCAGCCCTATCCAACTAGCCACGGC | + |
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Preference number: 6 (lower is better) Translates to: SQSQKRDGSHKG*DRPQPYPTSHG Trigger: GCCGTGGCTAGTTGGATAGGGCTGGGGCCGGTCGCACCCTTTGTGGCTGCCATCCCTCTTCTGGCTCTGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | GGAAGGAGGGGTTGCTGCAAGCTCTTCCAGGGGGCCTaGCTCTGCATCTTGACAGCTCCAGACCCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRRGCCKLFQGA*LCILTAPDPGR Trigger: CCTGCCTGGGTCTGGAGCTGTCAAGATGCAGAGCCAGGCCCCCTGGAAGAGCTTGCAGCAACCCCTCCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 72 bp | AGGGCACCCGCAACTCAGCGTCGTGTCTCACCACGGTaGAGAGTCCTGCCACTGCCAGCAGAGTCGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: RAPATQRRVSPR*RVLPLPAESSP Trigger: TGGTGACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACGACGCTGAGTTGCGGGTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | GCAAAGGTGGCTGGGATCCACTCGGCGGGGAAGTCATaGCTCTCCACGTGCTCGTGGATGTACCAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: AKVAGIHSAGKS*LSTCSWMYQAS Trigger: TGAGGCCTGGTACATCCACGAGCACGTGGAGAGGCATGACTTCCCCGCCGAGTGGATCCCAGCCACCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | TGTACCAGGCCTCAAAGGCTGAGAAGAGGAGAGCTGTaGACAGCCCACCGAGTGCTCGGCCCACCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CTRPQRLRRGEL*TAHRVLGPPAA Trigger: TGCTGCTGGTGGGCCGAGCACTCGGTGGGCTGTCCACAGCTCTCCTCTTCTCAGCCTTTGAGGCCTGGTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 72 bp | CTCCACGTGCTCGTGGATGTACCAGGCCTCAAAGGCTaGGAAGAGGAGAGCTGTGGACAGCCCACCGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LHVLVDVPGLKG*EEESCGQPTEC Trigger: GCACTCGGTGGGCTGTCCACAGCTCTCCTCTTCTCAGCCTTTGAGGCCTGGTACATCCACGAGCACGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | TCGTGGAGGACAAGGAGCCCTAGACAGGCCAGCAAATaGAGGGGCACTCGGAACCAATTGAGAACCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SWRTRSPRQASK*RGTRNQLRTPA Trigger: GGCCGGGGTTCTCAATTGGTTCCGAGTGCCCCTGCATTTGCTGGCCTGTCTAGGGCTCCTTGTCCTCCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 72 bp | TGCGGTACAGCGAAGAACCCAGAAGGCTGGCAGCCATaGAGCTGGAGAACACAATGCCCAGTGGGGCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: CGTAKNPEGWQP*SWRTQCPVGLR Trigger: ACGGAGCCCCACTGGGCATTGTGTTCTCCAGCTTCATGGCTGCCAGCCTTCTGGGTTCTTCGCTGTACCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | AGCGTCGTGTCTCACCACGGTGAAGAGTCCTGCCACTaGCAGCAGAGTCGTCACCATGACGGCAGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SVVSHHGEESCH*QQSRHHDGRAD Trigger: ATCTGCTCTGCCGTCATGGTGACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACGACGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | CAACTCAGCGTCGTGTCTCACCACGGTGAAGAGTCCTaGCACTGCCAGCAGAGTCGTCACCATGACGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QLSVVSHHGEES*HCQQSRHHDGR Trigger: TCTGCCGTCATGGTGACGACTCTGCTGGCAGTGGCAGGACTCTTCACCGTGGTGAGACACGACGCTGAGTTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS TCA 72 bp | ACAATGAGGACAGCAAGGGAAAGCAGGTGCATGGGCTaGAGGTGGTACCTCTTGGAGGTAGCGATGCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: TMRTARESRCMG*RWYLLEVAMRY Trigger: GTACCGCATCGCTACCTCCAAGAGGTACCACCTTCAGCCCATGCACCTGCTTTCCCTTGCTGTCCTCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS GCA 72 bp | AGAAGTCTAGTTGAAACTGAAGGAAGGAGGGGTTGCTaGAAGCTCTTCCAGGGGGCCTGGCTCTGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: RSLVETEGRRGC*KLFQGAWLCIL Trigger: CAAGATGCAGAGCCAGGCCCCCTGGAAGAGCTTGCAGCAACCCCTCCTTCCTTCAGTTTCAACTAGACTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CCA 72 bp | AACATATTCCTGGTGCCTGTTTTCCGATCGCTGTCGTaGAGGACAAGGAGCCCTAGACAGGCCAGCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: NIFLVPVFRSLS*RTRSPRQASKC Trigger: GCATTTGCTGGCCTGTCTAGGGCTCCTTGTCCTCCACGACAGCGATCGGAAAACAGGCACCAGGAATATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CAA 90 bp | TGTCCAGAGGAAGACAAAGATAAAGATGACACTCTCAAACAGCGCTaGTATGACACCCAACAGCAACACCCGGCGGTCAGACAGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CPEEDKDKDDTLKQR*YDTQQQHPAVRQQA Trigger: TGCCTGCTGTCTGACCGCCGGGTGTTGCTGTTGGGTGTCATACAAGCGCTGTTTGAGAGTGTCATCTTTATCTTTGTCTTCCTCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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| CDS CAA 72 bp | GAAGACAAAGATAAAGATGACACTCTCAAACAGCGCTaGTATGACACCCAACAGCAACACCCGGCGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EDKDKDDTLKQR*YDTQQQHPAVR Trigger: TCTGACCGCCGGGTGTTGCTGTTGGGTGTCATACAAGCGCTGTTTGAGAGTGTCATCTTTATCTTTGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051341.6 |
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