Pregenerated sensors for MFSD4B5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038528Ensembl transcript IDs: ENSMUST00000045524.7, ENSMUST00000073618.13, ENSMUST00000164566.8, ENSMUST00000170505.3, ENSMUST00000170579.9
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCGGAACTCCACTTCCAGCTCCAGCTTGGCGACTCCAGGCTACTaGGTTTGCCACTGCCGAGCTTTTCGGCAAACTCTCTGGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PRNSTSSSSLATPGY*VCHCRAFRQTLWSS Trigger: AGAGCTCCAGAGAGTTTGCCGAAAAGCTCGGCAGTGGCAAACCCAGTAGCCTGGAGTCGCCAAGCTGGAGCTGGAAGTGGAGTTCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR CCA 90 bp | GGCAGGGACCCTCAGGGAGCAGAGACAAGGGTCTCTAAGACACAGTaGCTAGCCAGACAGGAGTGTCAGAGATCTTGTCAATTCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GRDPQGAETRVSKTQ*LARQECQRSCQFRQ Trigger: CTGCCTGAATTGACAAGATCTCTGACACTCCTGTCTGGCTAGCCACTGTGTCTTAGAGACCCTTGTCTCTGCTCCCTGAGGGTCCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR GCA 90 bp | TCGAACATGCCTGTGTTGCAAGAGGAAGACGTTCAAGCCCCATCTTaGACAAGCCAGTGTGAGCACGTGATACTAAAGAAGGATCCACCC | + |
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Preference number: 1 (lower is better) Translates to: SNMPVLQEEDVQAPS*TSQCEHVILKKDPP Trigger: GGGTGGATCCTTCTTTAGTATCACGTGCTCACACTGGCTTGTGCAAGATGGGGCTTGAACGTCTTCCTCTTGCAACACAGGCATGTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR CCA 90 bp | GTGTGGCGGCATGAATTTATAATCCCAGCACTCAGAAGGCTGAGGTaGGTGGTTCTCTATGAATTTGAGGCAAGCCTGGTTTATGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: VWRHEFIIPALRRLR*VVLYEFEASLVYAA Trigger: TGCCGCATAAACCAGGCTTGCCTCAAATTCATAGAGAACCACCCACCTCAGCCTTCTGAGTGCTGGGATTATAAATTCATGCCGCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR GCA 90 bp | TCAAGGCAGTTTATTCAGGAACTTAACAATGTGCAGGAAGAAGAATaGCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SRQFIQELNNVQEEE*PTTLRHPPLYPLVL Trigger: GAGGACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACATTGTTAAGTTCCTGAATAAACTGCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR GCA 90 bp | GGAAGAGGAGCCTCAGATGATGAGAACTGCAGATTAACACGGTGCTaGTGGGGAGATGGCTCAGTGCTTAGAATACTTATCTTTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: GRGASDDENCRLTRC*WGDGSVLRILIFQV Trigger: CACTTGAAAGATAAGTATTCTAAGCACTGAGCCATCTCCCCAGCAGCACCGTGTTAATCTGCAGTTCTCATCATCTGAGGCTCCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR TCA 90 bp | ATTAAACTCAGGACCTCTGGAAGAGCAGTTGGTGCTCCTAACCGCTaGGCCATCTCGCCAGTTCAAGAGTACACTCTTAAAGCTATTTCT | + |
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Preference number: 1 (lower is better) Translates to: IKLRTSGRAVGAPNR*AISPVQEYTLKAIS Trigger: AGAAATAGCTTTAAGAGTGTACTCTTGAACTGGCGAGATGGCTCAGCGGTTAGGAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR CCA 90 bp | CTGAGGATCTGGGTACAGATCAGCTGCAACTGCATGTGTGCTAAGTaGATAAGATCCTGGGTTCAGTTACAGCAACAGCAACAACAACAA | + |
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Preference number: 1 (lower is better) Translates to: LRIWVQISCNCMCAK*IRSWVQLQQQQQQQ Trigger: TTGTTGTTGTTGCTGTTGCTGTAACTGAACCCAGGATCTTATCCACTTAGCACACATGCAGTTGCAGCTGATCTGTACCCAGATCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR CCA 90 bp | ACACCAGATCTCATTACAGATGGTTATGAGCCACAGTGTAGTTGCTaGGAATTAAACTCAGGACCTCTGGAAGAGCAGTTGGTGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: TPDLITDGYEPQCSC*ELNSGPLEEQLVLL Trigger: TAGGAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATCTGTAATGAGATCTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR CCA 90 bp | CTGATAATTCTGAATTCACTCTGGGCAATAGGTGGTGCTGTTGTATaGTTCTTTAAGCTAAGATTTAAGTTTGGGGAAATTCTGTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: LIILNSLWAIGGAVV*FFKLRFKFGEILCV Trigger: AACACACAGAATTTCCCCAAACTTAAATCTTAGCTTAAAGAACCATACAACAGCACCACCTATTGCCCAGAGTGAATTCAGAATTATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGGCGCGGACACTCCGCCGGAAGGCCACCGCCTTCTGGTCATTCTGCGCTGAGGGCGGGGTCTCCTaGTGGAAGCGAAACGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLARTLRRKATAFWSFCAEGGVS*WKRNVV Trigger: AACCACGTTTCGCTTCCAGCAGGAGACCCCGCCCTC...AGCGCAGAATGACCAGAAGGCGGTGGCCTTCCGGCGGAGTGTCCGCGCCAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTCACATTCCCAGAGACCTGGTGCTCATaGCTGCATACTCACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: AVLGAIIGLRPHPLLTFPETWCS*LHTHCQ Trigger: CTGACAGTGAGTATGCAGTCATGAGCACCAGGTCTC...TGGGAATGTGAGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGGGTTTGCCACTGCCGAGCTTTTCGGCAAACTCTCTGGAGCTCTGAACTCGAAGGATCCACCCAGTaGGGGCGGGGTCTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: YWVCHCRAFRQTLWSSELEGSTQ*GRGLLL Trigger: CAGCAGGAGACCCCGCCCTCACTGGGTGGATCCTTC...GAGTTCAGAGCTCCAGAGAGTTTGCCGAAAAGCTCGGCAGTGGCAAACCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR CCA 90 bp | AGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTGTAGGCACCGTTCATTaGCTCAGGACTACTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RLGSSPGRHHRAAATPTPVGTVH*LRTTFV Trigger: GACAAAAGTAGTCCTGAGCCAATGAACGGTGCCTAC...AGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTCTCCCCATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTAGATTAACACGGTGCTaGTGGGGAGATGGCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPLPITPVHVGTVHWLRTRLTRC*WGDGSV Trigger: CACTGAGCCATCTCCCCAGCAGCACCGTGTTAATCT...AGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGATGGGGAGAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTGGACTTCGAACATGCCTGTGTTGCAAGAGGAAGACGTTCAAGCCCCATCACCTCAGACATCAGCTaGCTGATGGGTGCCGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: KLDFEHACVARGRRSSPITSDIS*LMGAAW Trigger: CCACGCGGCACCCATCAGTCAGCTGATGTCTGAGGT...GATGGGGCTTGAACGTCTTCCTCTTGCAACACAGGCATGTTCGAAGTCCAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTCTCCCCATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTGATGCAGGGAACTGTTaGTTAGCCTTGCTGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: SPLPITPVHVGTVHWLRTDAGNC*LALLQC Trigger: ACATTGCAGCAAGGCTAATCAACAGTTCCCTGCATC...AGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGATGGGGAGAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCGAAGTGCCAAGTCACAGAACGTGCAGGGAGCGAATGTGAGAGTCGAGCTGCGAACATGCCTGTGTTaGAAGAGGAAGACGTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ARSAKSQNVQGANVRVELRTCLC*KRKTFK Trigger: CTTGAACGTCTTCCTCTTGCAACACAGGCATGTTCG...CAGCTCGACTCTCACATTCGCTCCCTGCACGTTCTGTGACTTGGCACTTCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTCTCAGGAGAGTAGCTTaGAGACCTTGGCTGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CAGRRMPHHSPPSPFIPSLRRVA*RPWLWV Trigger: AACCCACAGCCAAGGTCTCCAAGCTACTCTCCTGAG...AGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCGAAGTGCCAAGTCACAGAACGTGCAGGGAGCGAATGTGAGAGTCGAGCTGTTGCACAAGCCAGTGTaGGCACGTGATACTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: ARSAKSQNVQGANVRVELLHKPV*ARDTKE Trigger: TTCTTTAGTATCACGTGCTCACACTGGCTTGTGCAA...CAGCTCGACTCTCACATTCGCTCCCTGCACGTTCTGTGACTTGGCACTTCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | ATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTACTTTTGTCACAGGAGAGGACACAGGCTaGAGAGTGTCTCAGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ITPVHVGTVHWLRTTFVTGEDTG*RVSQES Trigger: ACTCTCCTGAGACACTCTGCAGCCTGTGTCCTCTCC...TGTGACAAAAGTAGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGCAGAGACAAGGGTCTCTAAGACACAGTGGCTAGCCAGACAGGAGTGTGATGCAGGGAACTGTTaGTTAGCCTTGCTGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: QGAETRVSKTQWLARQECDAGNC*LALLQC Trigger: ACATTGCAGCAAGGCTAATCAACAGTTCCCTGCATC...ACACTCCTGTCTGGCTAGCCACTGTGTCTTAGAGACCCTTGTCTCTGCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCAGGGACCCTAGGAAGCCATATTTCTTCAGTCCCCAAGGCCCAAGGTTGCGGGAGACCTCTTGTTaGTCAGAACCTCAGACATCA | + |
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Preference number: 2 (lower is better) Translates to: SSRDPRKPYFFSPQGPRLRETSC*SEPQTS Trigger: TGATGTCTGAGGTTCTGAGCAACAAGAGGTCTCCCG...CAACCTTGGGCCTTGGGGACTGAAGAAATATGGCTTCCTAGGGTCCCTGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | CCATATTTCTTCAGTCCCCAAGGCCCAAGGTTGGTCTATGGGGCATTTCTCGACGTTCAAGCCCCATCTTaGACAAGCCAGTGTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PYFFSPQGPRLVYGAFLDVQAPS*TSQCEH Trigger: GTGCTCACACTGGCTTGTGCAAGATGGGGCTTGAAC...GTCGAGAAATGCCCCATAGACCAACCTTGGGCCTTGGGGACTGAAGAAATATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | AGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTCTTCATTTTAACCACTaGAAAATCCATTGCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: RLGSSPGRHHRAAATPTPLHFNH*KIHCMC Trigger: ACACATGCAATGGATTTTGCAGTGGTTAAAATGAAG...AGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCTATTTGTAAAACCAAGTGGATGGCCACCCAGAAATGGAAGTGCTAGAAAAGCCTTCTGGTCATTCTaGGCTGTGGTCTCGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLFVKPSGWPPRNGSARKAFWSF*AVVSVW Trigger: CCAGACCGAGACCACAGCGCAGAATGACCAGAAGGC...TTTTCTAGCACTTCCATTTCTGGGTGGCCATCCACTTGGTTTTACAAATAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCAAGTGTGAGGACCAGAGTCTAGATCTCCAGACACTGCCTAAATCCCAGGCCTCCCTAGGCATCTaGACACATGAGAACATGCAG | + |
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Preference number: 2 (lower is better) Translates to: SFKCEDQSLDLQTLPKSQASLGI*THENMQ Trigger: CTGCATGTTCTCATGTGTGCAGATGCCTAGGGAGGC...CTGGGATTTAGGCAGTGTCTGGAGATCTAGACTCTGGTCCTCACACTTGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCAGGAACTTAACAATGTaGAGGAAGAAGAATGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QEEECPTTLRHPPLYPLVRNLTM*RKKNAP Trigger: TGGGGCATTCTTCTTCCTGCACATTGTTAAGTTCCT...GACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR CAA 90 bp | TGCCACCTTGCCCCAGGAACCTTTCTGATATTAGGTCAAGGAAAGTaGGACTTCGAACATGCCTGTGTTGCAAGAGGAAGACGTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: CHLAPGTFLILGQGK*DFEHACVARGRRSS Trigger: GCTTGAACGTCTTCCTCTTGCAACACAGGCATGTTCGAAGTCCAACTTTCCTTGACCTAATATCAGAAAGGTTCCTGGGGCAAGGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCGCCTTGCTGCAATGTTaGACCAACACTTATTATAAG | + |
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Preference number: 2 (lower is better) Translates to: QEEECPTTLRHPPLYPLVALLQC*TNTYYK Trigger: CTTATAATAAGTGTTGGTTCAACATTGCAGCAAGGC...GACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | GATGGTTATGAGCCACAGTGTAGTTGCTGGGAATTAAACTCAGGACCTCTGGAACCTGGTGCTCATGACTaGATACTCACTGTCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DGYEPQCSCWELNSGPLEPGAHD*ILTVSW Trigger: CCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGG...TTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGAGGGATATGAGGAAGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCGTAGGCACCGTTCATTaGCTCAGGACTACTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: ILRDMRKSGASHKTWQQSVGTVH*LRTTFV Trigger: GACAAAAGTAGTCCTGAGCCAATGAACGGTGCCTAC...GGACTGCTGCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCCCTCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCAGGGACCCTAGGAAGCCATATTTCTTCAGTCCCCAAGGCCCAAGGTTGTGTCTAACAGTGCAATaGATTGAGAACCTGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSRDPRKPYFFSPQGPRLCLTVQ*IENLFA Trigger: TGCAAACAGGTTCTCAATTCATTGCACTGTTAGACA...CAACCTTGGGCCTTGGGGACTGAAGAAATATGGCTTCCTAGGGTCCCTGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | ATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTACTTTTGTCACAGGGGAGATGGCTCAGTaGTTAGAATACTTATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ITPVHVGTVHWLRTTFVTGEMAQ*LEYLSF Trigger: GAAAGATAAGTATTCTAAGCACTGAGCCATCTCCCC...TGTGACAAAAGTAGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | CGTTTGCAATGCTTATGGCATAGCTACGACTCAAAACCAGTAAGAATCAAACCCCCTGGTGCTCATGACTaGATACTCACTGTCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLQCLWHSYDSKPVRIKPPGAHD*ILTVSW Trigger: CCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGG...GGGTTTGATTCTTACTGGTTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCAAGTGTGAGGACCAGAGTCTAGATCTCCAGACACTGCCTAAATCCCAGGAGCCACAGTGTAGTTaGTGGGAATTAAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFKCEDQSLDLQTLPKSQEPQCS*WELNSG Trigger: TCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTC...CTGGGATTTAGGCAGTGTCTGGAGATCTAGACTCTGGTCCTCACACTTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGAGGGATATGAGGAAGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCAATCCATTGCATGTGTaGACATACAGCACACACACA | + |
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Preference number: 2 (lower is better) Translates to: ILRDMRKSGASHKTWQQSNPLHV*TYSTHT Trigger: TGTGTGTGTGCTGTATGTGCACACATGCAATGGATT...GGACTGCTGCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCCCTCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| 3UTR-3UTR CCA 90 bp | AATGAATTGAGAACCTGTTTGCACCAAGCAATTAATCAGTTGACAGGAAAGCTTCTTCCAGCTCCAGCTTaGCGACTCCAGGCTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: NELRTCLHQAINQLTGKLLPAPA*RLQATG Trigger: CCCAGTAGCCTGGAGTCGCCAAGCTGGAGCTGGAAG...AAGCTTTCCTGTCAACTGATTAATTGCTTGGTGCAAACAGGTTCTCAATTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGGAGTGTCAGAGATCTTGTCAATTCAGGCAGTTTGCCTTAGTGAAGAAAGGCATCTGCACACATaGGAACATGCAGACACATAT | + |
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Preference number: 2 (lower is better) Translates to: QTGVSEILSIQAVCLSEERHLHT*EHADTY Trigger: ATATGTGTCTGCATGTTCTCATGTGTGCAGATGCCT...TTCTTCACTAAGGCAAACTGCCTGAATTGACAAGATCTCTGACACTCCTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGCTCTGATGAAACCCAGTGTTATGTACAACAGACACATGCCAAAGATACCACAGTGTAGTTGCTaGGAATTAAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: LPALMKPSVMYNRHMPKIPQCSC*ELNSGP Trigger: AGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGG...TATCTTTGGCATGTGTCTGTTGTACATAACACTGGGTTTCATCAGAGCTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | AATGAATTGAGAACCTGTTTGCACCAAGCAATTAATCAGTTGACAGGAAAGCTTCTGATGAGCCCGAAGTaGCAAGTCACAGAACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NELRTCLHQAINQLTGKLLMSPK*QVTERA Trigger: TGCACGTTCTGTGACTTGGCACTTCGGGCTCATCAG...AAGCTTTCCTGTCAACTGATTAATTGCTTGGTGCAAACAGGTTCTCAATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACCAGTAAGAATCAAACCCGGAAATAATAAAGCACAAACCCAAGCTGTACCACAGTGTAGTTGCTaGGAATTAAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: SKPVRIKPGNNKAQTQAVPQCSC*ELNSGP Trigger: AGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGG...TACAGCTTGGGTTTGTGCTTTATTATTTCCGGGTTTGATTCTTACTGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTCAATTAGTGGAACAAAATTAAGCTTTGGATCTTCTTGCCCATGTTGTGAGGGAGAAATTTGGAAGTaGAGCTTCGAAAGAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSISGTKLSFGSSCPCCEGEIWK*SFEREE Trigger: TTCTTCTCTTTCGAAGCTGCACTTCCAAATTTCTCC...CTCACAACATGGGCAAGAAGATCCAAAGCTTAATTTTGTTCCACTAATTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR-3UTR GCA 90 bp | AAAAGTAAAATCGTCAAACGTTTGCAATGCTTATGGCATAGCTACGACTCAAAAGAGCCACAGTGTAGTTaGTGGGAATTAAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSKIVKRLQCLWHSYDSKEPQCS*WELNSG Trigger: TCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTC...TTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACGTTTGACGATTTTACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| 3UTR CAA 90 bp | TCATGTGTAGGTTTAGTAAAATACAATGTTATATCTAATTTCTCCTaGAGTTTTACTACTATCCAAAGAGCGGTGAAGCTGAGTGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SCVGLVKYNVISNFS*SFTTIQRAVKLSVA Trigger: CGCCACACTCAGCTTCACCGCTCTTTGGATAGTAGTAAAACTCAAGGAGAAATTAGATATAACATTGTATTTTACTAAACCTACACATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | GCCGGAAGGCCACCGCCTTCTGGTCATTCTGCGCTGTaGTCTCGGTCTGGAGGAGGCGCTGCCCAGCAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: AGRPPPSGHSAL*SRSGGGAAQQP Trigger: CGGCTGCTGGGCAGCGCCTCCTCCAGACCGAGACCACAGCGCAGAATGACCAGAAGGCGGTGGCCTTCCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | ACCGCCTTCTGGTCATTCTGCGCTGTGGTCTCGGTCTaGAGGAGGCGCTGCCCAGCAGCCGCGGCCCCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAFWSFCAVVSV*RRRCPAAAAPK Trigger: TTTCGGGGCCGCGGCTGCTGGGCAGCGCCTCCTCCAGACCGAGACCACAGCGCAGAATGACCAGAAGGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR GCA 72 bp | ACACTCCGCCGGAAGGCCACCGCCTTCTGGTCATTCTaGGCTGTGGTCTCGGTCTGGAGGAGGCGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLRRKATAFWSF*AVVSVWRRRCP Trigger: TGGGCAGCGCCTCCTCCAGACCGAGACCACAGCGCAGAATGACCAGAAGGCGGTGGCCTTCCGGCGGAGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | TCACCAGCCCCAGGAAGGCGGCATACAGGACCACGGTaGAGAACCAGCGCAGCACGCTCTTGGCGCGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SPAPGRRHTGPR*RTSAARSWRGH Trigger: GTGTCCGCGCCAAGAGCGTGCTGCGCTGGTTCTCCACCGTGGTCCTGTATGCCGCCTTCCTGGGGCTGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | AAGAAGGATCCACCCAGTGAGGGCGGGGTCTCCTGCTaGAAGCGAAACGTGGTTACCCGGGAGACCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKDPPSEGGVSC*KRNVVTRETSC Trigger: ACAAGAGGTCTCCCGGGTAACCACGTTTCGCTTCCAGCAGGAGACCCCGCCCTCACTGGGTGGATCCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR TCA 72 bp | GGGCAGTGTAAGGAGTCTCAGGAGACCTGGTGCTCATaGCTGCATACTCACTGTCAGCTGGAGAGGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: GQCKESQETWCS*LHTHCQLERTQ Trigger: CTGTGTCCTCTCCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGGTCTCCTGAGACTCCTTACACTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR CCA 72 bp | GCAGGGGCAGCTCGGCTGGTTTGCAGACATACAGAATaGTGGTGGCAAGCCTGGCCATCTTCAGACTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGAARLVCRHTE*WWQAWPSSDFL Trigger: AAGAAAGTCTGAAGATGGCCAGGCTTGCCACCACCATTCTGTATGTCTGCAAACCAGCCGAGCTGCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | AGACCTGGTGCTCATGACTGCATACTCACTGTCAGCTaGAGAGGACACAGGCTGCAGAGTGTCTCAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPGAHDCILTVS*RGHRLQSVSGE Trigger: CTCTCCTGAGACACTCTGCAGCCTGTGTCCTCTCCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGGTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| 3UTR CCA 72 bp | GGGGCAGCTCGGCTGGTTTGCAGACATACAGAATGGTaGTGGCAAGCCTGGCCATCTTCAGACTTTCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GAARLVCRHTEW*WQAWPSSDFLV Trigger: AACAAGAAAGTCTGAAGATGGCCAGGCTTGCCACCACCATTCTGTATGTCTGCAAACCAGCCGAGCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR GCA 72 bp | GGGCAGCTGAGGATCTGGGTACAGATCAGCTGCAACTaGATGTGTGCTAAGTGGATAAGATCCTGGGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQLRIWVQISCN*MCAKWIRSWVQ Trigger: CTGAACCCAGGATCTTATCCACTTAGCACACATGCAGTTGCAGCTGATCTGTACCCAGATCCTCAGCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | TGGGTTTGCCACTGCCGAGCTTTTCGGCAAACTCTCTaGAGCTCTGAACTCAACGTCCTTCTAGATCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: WVCHCRAFRQTL*SSELNVLLDPV Trigger: TACCGGATCTAGAAGGACGTTGAGTTCAGAGCTCCAGAGAGTTTGCCGAAAAGCTCGGCAGTGGCAAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | CCTCAGGGAGCAGAGACAAGGGTCTCTAAGACACAGTaGCTAGCCAGACAGGAGTGTCAGAGATCTTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PQGAETRVSKTQ*LARQECQRSCQ Trigger: TTGACAAGATCTCTGACACTCCTGTCTGGCTAGCCACTGTGTCTTAGAGACCCTTGTCTCTGCTCCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR CCA 72 bp | GGAAGCCATATTTCTTCAGTCCCCAAGGCCCAAGGTTaGTCTATGGGGCATTTCTCGACTCTATCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSHISSVPKAQG*SMGHFSTLSRF Trigger: GAACCTGGATAGAGTCGAGAAATGCCCCATAGACCAACCTTGGGCCTTGGGGACTGAAGAAATATGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAAAGGGCAGCTGAGGATCTGGGTACAGATCAGCTGCAACTGCATGTGTGCTCGAACATGCCTGTGTaGCAAGAGGAAGACGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LKRAAEDLGTDQLQLHVCSNMPV*QEEDVQ Trigger: TTGAACGTCTTCCTCTTGCAACACAGGCATGTTCGA...GCACACATGCAGTTGCAGCTGATCTGTACCCAGATCCTCAGCTGCCCTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR-3UTR CAA 90 bp | CTAACCGCTGAGCCATCTCGCCAGTTCAAGAGTACACTCTTAAAGCTATTTCTGTCTCAGGAGAGTAGCTaGGAGACCTTGGCTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTAEPSRQFKSTLLKLFLSQESS*ETLAVG Trigger: ACCCACAGCCAAGGTCTCCAAGCTACTCTCCTGAGA...CAGAAATAGCTTTAAGAGTGTACTCTTGAACTGGCGAGATGGCTCAGCGGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| 3UTR CCA 72 bp | ATATTTCTTCAGTCCCCAAGGCCCAAGGTTGGTCTATaGGGCATTTCTCGACTCTATCCAGGTTCTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IFLQSPRPKVGL*GISRLYPGSLL Trigger: GAGCAGAGAACCTGGATAGAGTCGAGAAATGCCCCATAGACCAACCTTGGGCCTTGGGGACTGAAGAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGAGGGATATGAGGAAGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCAGATGCAGGGAACTGTaGATTAGCCTTGCTGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: ILRDMRKSGASHKTWQQSRCREL*ISLAAM Trigger: CATTGCAGCAAGGCTAATCAACAGTTCCCTGCATCT...GGACTGCTGCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCCCTCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGAGGGATATGAGGAAGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCAGGTACGTGGCTATCTaGAGGGATATGAGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ILRDMRKSGASHKTWQQSRYVAI*RDMRKS Trigger: TGACTTCCTCATATCCCTCAAGATAGCCACGTACCT...GGACTGCTGCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCCCTCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR GCA 72 bp | GCCTCAGATGATGAGAACTGCAGATTAACACGGTGCTaGTGGGGAGATGGCTCAGTGCTTAGAATACTTATC | + |
|
Preference number: 3 (lower is better) Translates to: ASDDENCRLTRC*WGDGSVLRILI Trigger: GATAAGTATTCTAAGCACTGAGCCATCTCCCCAGCAGCACCGTGTTAATCTGCAGTTCTCATCATCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR GCA 72 bp | CCTTCTCAAGGCAGTTTATTCAGGAACTTAACAATGTaGAGGAAGAAGAATGCCCCACCACTCTCCGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PSQGSLFRNLTM*RKKNAPPLSAI Trigger: GATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACATTGTTAAGTTCCTGAATAAACTGCCTTGAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCTCATGTCTCACTTCATaGAAATTAAGAATTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QEEECPTTLRHPPLYPLVSCLTS*KLRIGW Trigger: CCAGCCAATTCTTAATTTCAATGAAGTGAGACATGA...GACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGAGCAGAGACAAGGGTCTCTAAGACACAGTGGCTAGCCAGACAGGAGTGTTCATGTCTCACTTCATaGAAATTAAGAATTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGAETRVSKTQWLARQECSCLTS*KLRIGW Trigger: CCAGCCAATTCTTAATTTCAATGAAGTGAGACATGA...ACACTCCTGTCTGGCTAGCCACTGTGTCTTAGAGACCCTTGTCTCTGCTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR GCA 72 bp | GATCTCATTACAGATGGTTATGAGCCACAGTGTAGTTaGTGGGAATTAAACTCAGGACCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGYEPQCS*WELNSGPLEEQ Trigger: CTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATCTGTAATGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR CCA 72 bp | CTCATTACAGATGGTTATGAGCCACAGTGTAGTTGCTaGGAATTAAACTCAGGACCTCTGGAAGAGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LITDGYEPQCSC*ELNSGPLEEQL Trigger: CAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATCTGTAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGAATTGAGAACCTGTTTGCACCAAGCAATTAATCAGTTGACAGGAAAGCTTCCGGGAGACCTCTTGTaGCTCAGAACCTCAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: NELRTCLHQAINQLTGKLPGDLL*LRTSDI Trigger: GATGTCTGAGGTTCTGAGCAACAAGAGGTCTCCCGG...AAGCTTTCCTGTCAACTGATTAATTGCTTGGTGCAAACAGGTTCTCAATTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR CCA 72 bp | AGCTGCAACTGCATGTGTGCTAAGTGGATAAGATCCTaGGTTCAGTTACAGCAACAGCAACAACAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SCNCMCAKWIRS*VQLQQQQQQQQ Trigger: TTGTTGTTGTTGTTGCTGTTGCTGTAACTGAACCCAGGATCTTATCCACTTAGCACACATGCAGTTGCAGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR TCA 72 bp | GTTCAAGAGATATACAGACTTAGGAGTGAACAAATGTaGCTGAGTTCCAGGGACCCTAGGAAGCCATATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VQEIYRLRSEQM*LSSRDPRKPYF Trigger: GAAATATGGCTTCCTAGGGTCCCTGGAACTCAGTCACATTTGTTCACTCCTAAGTCTGTATATCTCTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR TCA 72 bp | AAGAGATATACAGACTTAGGAGTGAACAAATGTGACTaGGTTCCAGGGACCCTAGGAAGCCATATTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KRYTDLGVNKCD*VPGTLGSHISS Trigger: TGAAGAAATATGGCTTCCTAGGGTCCCTGGAACTCAGTCACATTTGTTCACTCCTAAGTCTGTATATCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTAAAATCGTCAAACGTTTGCAATGCTTATGGCATAGCTACGACTCAAAACCACTGCAAAATCCATaGCATGTGTGCACATACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSKIVKRLQCLWHSYDSKPLQNP*HVCTYS Trigger: GCTGTATGTGCACACATGCAATGGATTTTGCAGTGG...TTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACGTTTGACGATTTTACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| 3UTR CAA 72 bp | GCCCCGAAACCCCGGAACTCCACTTCCAGCTCCAGCTaGGCGACTCCAGGCTACTGGGTTTGCCACTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: APKPRNSTSSSS*ATPGYWVCHCR Trigger: TCGGCAGTGGCAAACCCAGTAGCCTGGAGTCGCCAAGCTGGAGCTGGAAGTGGAGTTCCGGGGTTTCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTCACATTCCCACAATCCAGGAGATGCTaGTGGGAAACGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVLGAIIGLRPHPLLTFPQSRRC*WETWLP Trigger: TGGCAGCCACGTTTCCCAGCAGCATCTCCTGGATTG...TGGGAATGTGAGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR CCA 90 bp | AGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTTGCTGCTGGGAAACGTaGCTGCCATTGAGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGSSPGRHHRAAATPTPCCWET*LPLRLH Trigger: ATGGAGCCTCAATGGCAGCCACGTTTCCCAGCAGCA...AGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTCCCCATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTATGTTGCAAAGAAGATaGCCAGGCCCCTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLPITPVHVGTVHWLRTMLQRR*PGPCRL Trigger: CAGCCTGCAGGGGCCTGGCCATCTTCTTTGCAACAT...AGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGATGGGGAGAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| 3UTR CAA 72 bp | TGTCATGTCTGTGGTAGCAGGGGCAGCTCGGCTGGTTaGCAGACATACAGAATGGTGGTGGCAAGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHVCGSRGSSAG*QTYRMVVASLA Trigger: GGCCAGGCTTGCCACCACCATTCTGTATGTCTGCAAACCAGCCGAGCTGCCCCTGCTACCACAGACATGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| CDS-3UTR TCA 90 bp | AGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTTTTTACAGAAAGGAGTaGGGTAAAGACCGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGSSPGRHHRAAATPTPFYRKE*GKDRLW Trigger: CCATAGCCGGTCTTTACCTCACTCCTTTCTGTAAAA...AGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTGCCCACGAAGATTTCTaGAAGGCTGCTGACGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CAGRRMPHHSPPSPFIPSAHEDF*KAADVP Trigger: CGGAACGTCAGCAGCCTTTCAGAAATCTTCGTGGGC...AGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCGCCCACGAAGATTTCTaGAAGGCTGCTGACGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QEEECPTTLRHPPLYPLVAHEDF*KAADVP Trigger: CGGAACGTCAGCAGCCTTTCAGAAATCTTCGTGGGC...GACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTCACCCAAGGCGAAACTaGAGTGCAAGGCCTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVPVIRLGSSPGRHHRAHPRRN*SARPAY Trigger: ATATGCAGGCCTTGCACTTCAGTTTCGCCTTGGGTG...AGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCTTATGACTGGCACCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR CCA 90 bp | ATGTGCAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTCCAGGAGATGCTGCTaGGAAACGTGGCTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MCRKKNAPPLSAIPLYTLSRRCC*ETWLPL Trigger: CAATGGCAGCCACGTTTCCCAGCAGCATCTCCTGGA...GAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTGGGCGCCATCATAGGGCTGCGGCCACACCCACTCCTCACATTCCCAGTAGAAAATGATTCATaGAGTCGAAAAGCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVLGAIIGLRPHPLLTFPVENDS*SRKALH Trigger: GTGGAGTGCTTTTCGACTGCATGAATCATTTTCTAC...TGGGAATGTGAGGAGTGGGTGTGGCCGCAGCCCTATGATGGCGCCCAGGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCTAGTCCTTTTCTCCTGCTTTTaGTCCAGAGGTAAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEEECPTTLRHPPLYPLVLFSCF*SRGKVA Trigger: AGCCACCTTACCTCTGGATCAAAAGCAGGAGAAAAG...GACTAGAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR CCA 90 bp | CCAGATAGTTGTAGCTGTCCTTCTGTAATGGCAGGGACCCTCAGGGAGCAGAGAGTAGCTTGGAGACCTTaGCTGTATCCAGAACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PDSCSCPSVMAGTLREQRVAWRP*LYPEHQ Trigger: TTGGTGTTCTGGATACAGCCAAGGTCTCCAAGCTAC...TCTCTGCTCCCTGAGGGTCCCTGCCATTACAGAAGGACAGCTACAACTATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164566.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATAGTTGTAGCTGTCCTTCTGTAATGGCAGGGACCCTCAGGGAGCAGAGAGTGGCTTCAAAGGATTaGTTCAAGGCTGAACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSCSCPSVMAGTLREQRVASKD*FKAERS Trigger: AGACCGTTCAGCCTTGAACCAATCCTTTGAAGCCAC...TCTCTGCTCCCTGAGGGTCCCTGCCATTACAGAAGGACAGCTACAACTATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTGAGGGATATGAGGAAGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCAAACGTGGCTGCCATTaGGGCTCCATACACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRDMRKSGASHKTWQQSKRGCH*GSIHRS Trigger: ACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTT...GGACTGCTGCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCCCTCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGCAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCAACATGAGACCAGGCTaGCAATGTTACACAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: MCRKKNAPPLSAIPLYTLNMRPG*QCYTTQ Trigger: TTGTGTTGTGTAACATTGGCAGCCTGGTCTCATGTT...GAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
||
| 3UTR CAA 72 bp | AGGAAGCCATATTTCTTCAGTCCCCAAGGCCCAAGGTaGGTCTATGGGGCATTTCTCGACTCTATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKPYFFSPQGPR*VYGAFLDSIQV Trigger: AACCTGGATAGAGTCGAGAAATGCCCCATAGACCAACCTTGGGCCTTGGGGACTGAAGAAATATGGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
||
| CDS-3UTR TCA 90 bp | GAACATGCCTGTGTTGCAAGAGGAAGACGTTCAAGCCCCATCTTGCACAAGCCATTTTACAGAAAGGAGTaGGGTAAAGACCGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: EHACVARGRRSSPILHKPFYRKE*GKDRLW Trigger: CCATAGCCGGTCTTTACCTCACTCCTTTCTGTAAAA...TGGCTTGTGCAAGATGGGGCTTGAACGTCTTCCTCTTGCAACACAGGCATGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| CDS-3UTR GCA 90 bp | AGGAGTCTCAGGAGACCTGGTGCTCATGACTGCATACTCACTGTCAGCTGGAGATTTATGCTGGTATACTaGTCAATCCAGGAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSLRRPGAHDCILTVSWRFMLVY*SIQEML Trigger: CAGCATCTCCTGGATTGAGCAGTATACCAGCATAAA...TCTCCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGGTCTCCTGAGACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CCA 90 bp | CAGGGAGCAGAGACAAGGGTCTCTAAGACACAGTGGCTAGCCAGACAGGAGTGTATTTCCCATTTATGCTaGTATACTGCTCAATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGAETRVSKTQWLARQECISHLC*YTAQSR Trigger: CCTGGATTGAGCAGTATACCAGCATAAATGGGAAAT...ACACTCCTGTCTGGCTAGCCACTGTGTCTTAGAGACCCTTGTCTCTGCTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CCA 90 bp | CAGTGTAGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTTGGTGCTCACACCGAGTCTAAGGTaGCTTCAAAGGATTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QCSCWELNSGPLEEQLVLTPSLR*LQRIGS Trigger: TGAACCAATCCTTTGAAGCCACCTTAGACTCGGTGT...GAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CCA 90 bp | ATCACCCCAGTCCACGTAGGCACCGTTCATTGGCTCAGGACTACTTTTGTCACAGATCCAGAGGTAAGGTaGCTACTTTATACATCACAG | + |
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Preference number: 4 (lower is better) Translates to: ITPVHVGTVHWLRTTFVTDPEVR*LLYTSQ Trigger: CTGTGATGTATAAAGTAGCCACCTTACCTCTGGATC...TGTGACAAAAGTAGTCCTGAGCCAATGAACGGTGCCTACGTGGACTGGGGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR TCA 90 bp | CAGACAGGAGTGTCAGAGATCTTGTCAATTCAGGCAGTTTGCCTTAGTGAAGAACCCAGAGATCCAAGATaGGGACGTTTCCACCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: QTGVSEILSIQAVCLSEEPRDPR*GRFHLY Trigger: ATACAGGTGGAAACGTCCTCATCTTGGATCTCTGGG...TTCTTCACTAAGGCAAACTGCCTGAATTGACAAGATCTCTGACACTCCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| 3UTR CAA 72 bp | GCCCCAGGAACCTTTCTGATATTAGGTCAAGGAAAGTaGGACTTCGAACATGCCTGTGTTGCAAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: APGTFLILGQGK*DFEHACVARGR Trigger: TCTTCCTCTTGCAACACAGGCATGTTCGAAGTCCAACTTTCCTTGACCTAATATCAGAAAGGTTCCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR CAA 72 bp | GACACAGTGGCTAGCCAGACAGGAGTGTCAGAGATCTaGTCAATTCAGGCAGTTTGCCTTAGTGAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: DTVASQTGVSEI*SIQAVCLSEEQ Trigger: TTGTTCTTCACTAAGGCAAACTGCCTGAATTGACAAGATCTCTGACACTCCTGTCTGGCTAGCCACTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS-3UTR TCA 90 bp | TCCTCAATTAGTGGAACAAAATTAAGCTTTGGATCTTCTTGCCCATGTTGTGAGGCCCACGAAGATTTCTaGAAGGCTGCTGACGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SSISGTKLSFGSSCPCCEAHEDF*KAADVP Trigger: CGGAACGTCAGCAGCCTTTCAGAAATCTTCGTGGGC...CTCACAACATGGGCAAGAAGATCCAAAGCTTAATTTTGTTCCACTAATTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| CDS-3UTR TCA 90 bp | CGTTTGCAATGCTTATGGCATAGCTACGACTCAAAACCAGTAAGAATCAAACCCTCTGGCCCTCACTGTTaGTGCTTTTCTCCTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RLQCLWHSYDSKPVRIKPSGPHC*CFSPAF Trigger: AAAAGCAGGAGAAAAGCATCAACAGTGAGGGCCAGA...GGGTTTGATTCTTACTGGTTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR GCA 90 bp | GATGGTTATGAGCCACAGTGTAGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGTAGAAAATGATTCATaGAGTCGAAAAGCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: DGYEPQCSCWELNSGPLEVENDS*SRKALH Trigger: GTGGAGTGCTTTTCGACTGCATGAATCATTTTCTAC...TTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS-3UTR GCA 90 bp | AAAAGTAAAATCGTCAAACGTTTGCAATGCTTATGGCATAGCTACGACTCAAAAGCTCAATCCAGGAGATaGTGCTGGGAAACGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSKIVKRLQCLWHSYDSKAQSRR*CWETWL Trigger: CAGCCACGTTTCCCAGCAGCATCTCCTGGATTGAGC...TTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACGTTTGACGATTTTACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR GCA 90 bp | TTCATGCTAAGGAACCACAAAATGTTTCCCACTGGACCATGTTCAAGAGATATAGTAGAAAATGATTCATaGAGTCGAAAAGCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FMLRNHKMFPTGPCSRDIVENDS*SRKALH Trigger: GTGGAGTGCTTTTCGACTGCATGAATCATTTTCTAC...TATATCTCTTGAACATGGTCCAGTGGGAAACATTTTGTGGTTCCTTAGCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| 3UTR CAA 72 bp | CAAGTAACAGAGAAATGTTCACAGTTTACACAGGGATaGGCGAAAAGCACTTCCAATGTAACATTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QVTEKCSQFTQG*AKSTSNVTFCS Trigger: AGAGCAAAATGTTACATTGGAAGTGCTTTTCGCCAATCCCTGTGTAAACTGTGAACATTTCTCTGTTACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| CDS-3UTR CCA 90 bp | AAAAGTAAAATCGTCAAACGTTTGCAATGCTTATGGCATAGCTACGACTCAAAATACACAACACAATCATaGTTCCAGGCTGTAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: KSKIVKRLQCLWHSYDSKYTTQS*FQAVRM Trigger: CATTCTTACAGCCTGGAACCATGATTGTGTTGTGTA...TTTTGAGTCGTAGCTATGCCATAAGCATTGCAAACGTTTGACGATTTTACTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | GCCGGAAGGCCACCGCCTTCTGGTCATTCTGCGCTGTGGTCTCGGTCTGGAGGATCCGGTTCACATTTCTaGCCAGGTCCGGAAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: AGRPPPSGHSALWSRSGGSGSHF*PGPEMW Trigger: CCACATTTCCGGACCTGGCAAGAAATGTGAACCGGA...TCCTCCAGACCGAGACCACAGCGCAGAATGACCAGAAGGCGGTGGCCTTCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| CDS-3UTR CAA 90 bp | AGTCAGGTGCCAGTCATAAGACTTGGCAGCAGTCCTGGGCGCCATCATAGGGCTCAGATAGTGCAGGAGTaGCCATTAGTCCCAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SQVPVIRLGSSPGRHHRAQIVQE*PLVPGQ Trigger: CTGCCCTGGGACTAATGGCAACTCCTGCACTATCTG...AGCCCTATGATGGCGCCCAGGACTGCTGCCAAGTCTTATGACTGGCACCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS TCA 90 bp | ACAAGTAGCCGAGGGCTCGGCCCACGAAGATTTCTGAAAGGCTGCTaGCGTTCCGGTTCACATTTCTTGCCAGGTCCGGAAATGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TSSRGLGPRRFLKGC*RSGSHFLPGPEMWV Trigger: GACCCACATTTCCGGACCTGGCAAGAAATGTGAACCGGAACGTCAGCAGCCTTTCAGAAATCTTCGTGGGCCGAGCCCTCGGCTACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045524.7 ENSMUST00000073618.13 ENSMUST00000164566.8 ENSMUST00000170505.3 ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | GGAGTCTCAGGAGACCTGGTGCTCATGACTGCATACTCACTGTCAGCTGGAGAGGCTATGGTGAGCAGGTaGGACAGCCCCAAAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: GVSGDLVLMTAYSLSAGEAMVSR*DSPKSR Trigger: TCTACTTTTGGGGCTGTCCAACCTGCTCACCATAGC...CTCTCCAGCTGACAGTGAGTATGCAGTCATGAGCACCAGGTCTCCTGAGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | ATGTGCAGGAAGAAGAATGCCCCACCACTCTCCGCCATCCCCCTTTATACCCTCAGTAGCTTGGAGACCTaGGCTGTATCCAGAACACCA | + |
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Preference number: 5 (lower is better) Translates to: MCRKKNAPPLSAIPLYTLSSLET*AVSRTP Trigger: TGGTGTTCTGGATACAGCCAAGGTCTCCAAGCTACT...GAGGGTATAAAGGGGGATGGCGGAGAGTGGTGGGGCATTCTTCTTCCTGCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164566.8 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTTGGTGCTCCTAACCGCTCCGGTTCACATTTCTaGCCAGGTCCGGAAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGIKLRTSGRAVGAPNRSGSHF*PGPEMW Trigger: CCACATTTCCGGACCTGGCAAGAAATGTGAACCGGA...GCGGTTAGGAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS CCA 90 bp | ACAGCAGATTCTTGTCATCGGGTACCGCGAACACCGAGTCTAAGGTaGCTTCAAAGGATTGGTTCAAGGCTGAACGGTCTGATTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: TADSCHRVPRTPSLR*LQRIGSRLNGLIGV Trigger: AACCCCAATCAGACCGTTCAGCCTTGAACCAATCCTTTGAAGCCACCTTAGACTCGGTGTTCGCGGTACCCGATGACAAGAATCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS GCA 90 bp | CAGATTTCCCATTTATGCTGGTATACTGCTCAATCCAGGAGATGCTaGTGGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: QISHLCWYTAQSRRC*WETWLPLRLHTQKS Trigger: CGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCAGCATCTCCTGGATTGAGCAGTATACCAGCATAAATGGGAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS CCA 90 bp | ATTTCCCATTTATGCTGGTATACTGCTCAATCCAGGAGATGCTGCTaGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAGTCGCAA | + |
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Preference number: 5 (lower is better) Translates to: ISHLCWYTAQSRRCC*ETWLPLRLHTQKSQ Trigger: TTGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCAGCATCTCCTGGATTGAGCAGTATACCAGCATAAATGGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | GATGGTTATGAGCCACAGTGTAGTTGCTGGGAATTAAACTCAGGACCTCTGGAATCCGGTTCACATTTCTaGCCAGGTCCGGAAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: DGYEPQCSCWELNSGPLESGSHF*PGPEMW Trigger: CCACATTTCCGGACCTGGCAAGAAATGTGAACCGGA...TTCCAGAGGTCCTGAGTTTAATTCCCAGCAACTACACTGTGGCTCATAACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | AGTCTCCAGCTCCCAGCTCTGATGAAACCCAGTGTTATGTACAACAGACACATGAGTTCTGAGCAGATGTaGTTGTACCCCAGGCCAACT | + |
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Preference number: 5 (lower is better) Translates to: SLQLPALMKPSVMYNRHMSSEQM*LYPRPT Trigger: AGTTGGCCTGGGGTACAACAACATCTGCTCAGAACT...CATGTGTCTGTTGTACATAACACTGGGTTTCATCAGAGCTGGGAGCTGGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS GCA 90 bp | CCAATCAAAATAAATGCTGCAGATTTCCCATTTATGCTGGTATACTaGTCAATCCAGGAGATGCTGCTGGGAAACGTGGCTGCCATTGAG | + |
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Preference number: 5 (lower is better) Translates to: PIKINAADFPFMLVY*SIQEMLLGNVAAIE Trigger: CTCAATGGCAGCCACGTTTCCCAGCAGCATCTCCTGGATTGAGCAGTATACCAGCATAAATGGGAAATCTGCAGCATTTATTTTGATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | CTCCCAGCTCTGATGAAACCCAGTGTTATGTACAACAGACACATGCCAAAGATATTCTGGCCCTCACTGTaGATGCTTTTCTCCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LPALMKPSVMYNRHMPKIFWPSL*MLFSCF Trigger: AAAGCAGGAGAAAAGCATCAACAGTGAGGGCCAGAA...TATCTTTGGCATGTGTCTGTTGTACATAACACTGGGTTTCATCAGAGCTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS-3UTR CAA 90 bp | TCCTCAATTAGTGGAACAAAATTAAGCTTTGGATCTTCTTGCCCATGTTGTGAGGCTATGGTGAGCAGGTaGGACAGCCCCAAAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SSISGTKLSFGSSCPCCEAMVSR*DSPKSR Trigger: TCTACTTTTGGGGCTGTCCAACCTGCTCACCATAGC...CTCACAACATGGGCAAGAAGATCCAAAGCTTAATTTTGTTCCACTAATTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073618.13 |
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| CDS GCA 72 bp | CCCAGCACAGCAGCACTCACTCCCTGGAGGAGGTGCTaGTCAACAGACGTGGGCCCGGACCCACGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: PSTAALTPWRRC*STDVGPDPRDP Trigger: GGGGTCCCGTGGGTCCGGGCCCACGTCTGTTGAGCAGCACCTCCTCCAGGGAGTGAGTGCTGCTGTGCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045524.7 |
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| CDS CCA 72 bp | AGTGTTCTTCCCACAGCCTGGAGCCCGTTCTTCCCTTaGGTCTCAACCTGGAGGAGGTGCTGCTCAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: SVLPTAWSPFFP*VSTWRRCCSTD Trigger: GTCTGTTGAGCAGCACCTCCTCCAGGTTGAGACCCAAGGGAAGAACGGGCTCCAGGCTGTGGGAAGAACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073618.13 ENSMUST00000164566.8 ENSMUST00000170579.9 |
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| CDS TCA 72 bp | CGAGGGCTCGGCCCACGAAGATTTCTGAAAGGCTGCTaGCGTTCCGGTTCACATTTCTTGCCAGGTCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: RGLGPRRFLKGC*RSGSHFLPGPE Trigger: TTCCGGACCTGGCAAGAAATGTGAACCGGAACGTCAGCAGCCTTTCAGAAATCTTCGTGGGCCGAGCCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045524.7 ENSMUST00000073618.13 ENSMUST00000164566.8 ENSMUST00000170505.3 ENSMUST00000170579.9 |
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| CDS CCA 72 bp | TCTTGTCATCGGGTACCGCGAACACCGAGTCTAAGGTaGCTTCAAAGGATTGGTTCAAGGCTGAACGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCHRVPRTPSLR*LQRIGSRLNGL Trigger: CAGACCGTTCAGCCTTGAACCAATCCTTTGAAGCCACCTTAGACTCGGTGTTCGCGGTACCCGATGACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS GCA 72 bp | ATAAATGCTGCAGATTTCCCATTTATGCTGGTATACTaGTCAATCCAGGAGATGCTGCTGGGAAACGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: INAADFPFMLVY*SIQEMLLGNVA Trigger: AGCCACGTTTCCCAGCAGCATCTCCTGGATTGAGCAGTATACCAGCATAAATGGGAAATCTGCAGCATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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| CDS TCA 72 bp | TTCTGGCCCTCACTGTTGATGCTTTTCTCCTGCTTTTaGTCCAGAGGTAAGGTGGCTACTTTATACATCACA | + |
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Preference number: 6 (lower is better) Translates to: FWPSLLMLFSCF*SRGKVATLYIT Trigger: TGTGATGTATAAAGTAGCCACCTTACCTCTGGATCAAAAGCAGGAGAAAAGCATCAACAGTGAGGGCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170579.9 |
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