Pregenerated sensors for MFSD4B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096687Ensembl transcript IDs: ENSMUST00000178045.9, ENSMUST00000178563.3
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAAATTTCAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTaGCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HKFQVQERAQSQPEL*PEWCPQEWQSRSKP Trigger: TGGCTTACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTGAAATTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 90 bp | CTGACCCCTGGCACACTACCCAGCTCTTCACACACCAACACCTTCTaGAAGGTGGAGACTACAAAACAGTCTCCTAACAAGATCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LTPGTLPSSSHTNTF*KVETTKQSPNKIPV Trigger: CACTGGGATCTTGTTAGGAGACTGTTTTGTAGTCTCCACCTTCCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 90 bp | CATCTTGATTTGGTTTCCAGGTACTTCAAACTCATGGAGTGGTCCTaGAGGTGGACATGGGCTCTCCAATCACCACAACCAGATGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: HLDLVSRYFKLMEWS*RWTWALQSPQPDEA Trigger: GGCCTCATCTGGTTGTGGTGATTGGAGAGCCCATGTCCACCTCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 90 bp | GAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATaGCTCGTGTCGGGGTGTGACTGCACAGCACAGGTCTTTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ENYLPISKDALCHDK*LVSGCDCTAQVFAQ Trigger: CTGAGCAAAGACCTGTGCTGTGCAGTCACACCCCGACACGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 90 bp | GTCTTCCATCTTGATTTGGTTTCCAGGTACTTCAAACTCATGGAGTaGTCCTGGAGGTGGACATGGGCTCTCCAATCACCACAACCAGAT | + |
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Preference number: 1 (lower is better) Translates to: VFHLDLVSRYFKLME*SWRWTWALQSPQPD Trigger: ATCTGGTTGTGGTGATTGGAGAGCCCATGTCCACCTCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 90 bp | CTGTACTCCTCATCCTTGACCATCCCACTGTCTTCCATCTTGATTTaGTTTCCAGGTACTTCAAACTCATGGAGTGGTCCTGGAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LYSSSLTIPLSSILI*FPGTSNSWSGPGGG Trigger: TCCACCTCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGACAGTGGGATGGTCAAGGATGAGGAGTACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCTGACCCCTGGCACACTACCCAGCTCTTCACACACCAACACCTTCTGGGCCAGAGCTCTGCCCTaGATGGTGTCCTCAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: TVLTPGTLPSSSHTNTFWARALP*MVSSGV Trigger: CACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGC...CCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CCA 90 bp | GCACACTACCCAGCTCTTCACACACCAACACCTTCTGGAAGGTGGAGACTACAATGGTGTCCTCAGGAGTaGCAGTCACGCAGTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: AHYPALHTPTPSGRWRLQWCPQE*QSRSKP Trigger: TGGCTTACTGCGTGACTGCCACTCCTGAGGACACCA...TTGTAGTCTCCACCTTCCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTAGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCAAGATGCTCTTTGTCATaGCAAATGGCTCGTGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: QASSVTLVKLYSSSLTIPRCSLS*QMARVG Trigger: CCCGACACGAGCCATTTGTCATGACAAAGAGCATCT...TGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCTAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR GCA 90 bp | GCACACTACCCAGCTCTTCACACACCAACACCTTCTGGAAGGTGGAGACTACAATCAAGTGCAAGAGCGTaGTCAAAGTCAGCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AHYPALHTPTPSGRWRLQSSARA*SKSARA Trigger: AGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTGA...TTGTAGTCTCCACCTTCCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CAA 90 bp | GCTGTACTCCTCATCCTTGACCATCCCACTGTCTTCCATCTTGATTaGGTTTCCAGGTACTTCAAACTCATGGAGTGGTCCTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AVLLILDHPTVFHLD*VSRYFKLMEWSWRW Trigger: CCACCTCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAAACAAAACAGTGAGTTAGAGGCCAACCTGGCCTACTTAGTAAATTCCGCCAGAGCTCTGCCCTaGATGGTGTCCTCAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RQKQNSELEANLAYLVNSARALP*MVSSGV Trigger: CACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGC...GGAATTTACTAAGTAGGCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTAGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCAACAGAAACAAAACAGTaGGTTAGAGGCCAACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QASSVTLVKLYSSSLTIPTETKQ*VRGQPG Trigger: GCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGT...TGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCACTGTCTTCTCCCCAGATGCTCTCTaGATGACACAGACAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: LCHTCEAVLLILDHPTVFSPDAL*MTQTTA Trigger: TGCTGTTGTCTGTGTCATTCAGAGAGCATCTGGGGA...GAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CAA 90 bp | GTGAAGCTGTACTCCTCATCCTTGACCATCCCACTGTCTTCCATCTaGATTTGGTTTCCAGGTACTTCAAACTCATGGAGTGGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VKLYSSSLTIPLSSI*IWFPGTSNSWSGPG Trigger: TCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGTGTACTCCTCATCCTTaGCCATCCCACTGTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWCTPHP*PSHCLP Trigger: TGGAAGACAGTGGGATGGTCAAGGATGAGGAGTACA...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGGCTCTGTCACACTTGTaGAGCTGTACTCCTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWALSHL*SCTPHP Trigger: AGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGC...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCAACGTGTCCCCAGATaGTCTCTGAATGACACAGAC | + |
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Preference number: 2 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWQRVPR*SLNDTD Trigger: GTCTGTGTCATTCAGAGAGCATCTGGGGACACGTTG...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGTCTTCCATCTTGATTTaGTTTCCAGGTACTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: YKRLAQTRVTKGWPRLALSSILI*FPGTSN Trigger: GTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGA...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCACTGTCTTCCAGATGCTCTCTGAATaGCACAGACAACAGCATATA | + |
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Preference number: 2 (lower is better) Translates to: LCHTCEAVLLILDHPTVFQMLSE*HRQQHI Trigger: TATATGCTGTTGTCTGTGTCATTCAGAGAGCATCTG...GAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGTACAGTGCTGACCCCTaGCACACTACCCAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSYSADP*HTTQLF Trigger: GAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGTA...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCACAGCACAGGTCTTTaGTCAGCAAATCAGCTCATT | + |
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Preference number: 2 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWHSTGL*SANQLI Trigger: AATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTG...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTAGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCAGAACACAAGAGTGATTaGCAAGATGGTTTTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QASSVTLVKLYSSSLTIPEHKSD*QDGFGF Trigger: AAAACCAAAACCATCTTGCCAATCACTCTTGTGTTC...TGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCTAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCACTGTCTTCGAACACAAGAGTGATTaGCAAGATGGTTTTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LCHTCEAVLLILDHPTVFEHKSD*QDGFGF Trigger: AAAACCAAAACCATCTTGCCAATCACTCTTGTGTTC...GAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR GCA 90 bp | CAAACACAATCCCTGGAGGTTAAAAATAATCTCATTGCATTTCTAGAATCACAGAGTCAGCCAGAGCTCTaGCCTGAATGGTGTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QTQSLEVKNNLIAFLESQSQPEL*PEWCPQ Trigger: CTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT...CTGTGATTCTAGAAATGCAATGAGATTATTTTTAACCTCCAGGGATTGTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR GCA 90 bp | CAAACACAATCCCTGGAGGTTAAAAATAATCTCATTGCATTTCTAGAATCACAGTCAAGTGCAAGAGCGTaGTCAAAGTCAGCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QTQSLEVKNNLIAFLESQSSARA*SKSARA Trigger: AGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTGA...CTGTGATTCTAGAAATGCAATGAGATTATTTTTAACCTCCAGGGATTGTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR TCA 72 bp | CAAGACCCAGCTCCAGCCTTTGCTAATGAGGCAGGCTaGGGGCACCAGAGGACCCGTTCATACCGCTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: QDPAPAFANEAG*GHQRTRSYRCN Trigger: GTTGCAGCGGTATGAACGGGTCCTCTGGTGCCCTCAGCCTGCCTCATTAGCAAAGGCTGGAGCTGGGTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | GAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATaGTGTCCTCAGGAGTGGCAGTCACGCAGTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ERAQSQPELCPE*CPQEWQSRSKP Trigger: TGGCTTACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTAGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCAACCCAGCTCCAGCCTTaGCTAATGAGGCAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QASSVTLVKLYSSSLTIPTQLQP*LMRQAE Trigger: CTCAGCCTGCCTCATTAGCAAAGGCTGGAGCTGGGT...TGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCTAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR-3UTR CAA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGGCACAGCACAGGTCTTaGCTCAGCAAATCAGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: YKRLAQTRVTKGWPRLALAQHRS*LSKSAH Trigger: ATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTGC...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | CTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATaGCTCGTGTCGGGGTGTGACTGCACAGCACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LPISKDALCHDK*LVSGCDCTAQV Trigger: GACCTGTGCTGTGCAGTCACACCCCGACACGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR TCA 72 bp | TCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCTaGCCCCTGGCACACTACCCAGCTCTTCACACACCA | + |
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Preference number: 3 (lower is better) Translates to: SLLSKSAHFLQC*PLAHYPALHTP Trigger: TGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | GGCACACTACCCAGCTCTTCACACACCAACACCTTCTaGAAGGTGGAGACTACAAAACAGTCTCCTAACAAG | + |
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Preference number: 3 (lower is better) Translates to: GTLPSSSHTNTF*KVETTKQSPNK Trigger: CTTGTTAGGAGACTGTTTTGTAGTCTCCACCTTCCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | TCAGCAAATCAGCTCATTTTCTACAGTGCTGACCCCTaGCACACTACCCAGCTCTTCACACACCAACACCTT | + |
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Preference number: 3 (lower is better) Translates to: SANQLIFYSADP*HTTQLFTHQHL Trigger: AAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGTAGAAAATGAGCTGATTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | TACCCAGCTCTTCACACACCAACACCTTCTGGAAGGTaGAGACTACAAAACAGTCTCCTAACAAGATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: YPALHTPTPSGR*RLQNSLLTRSQ Trigger: CTGGGATCTTGTTAGGAGACTGTTTTGTAGTCTCCACCTTCCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | TCCATCTTGATTTGGTTTCCAGGTACTTCAAACTCATaGAGTGGTCCTGGAGGTGGACATGGGCTCTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SILIWFPGTSNS*SGPGGGHGLSN Trigger: ATTGGAGAGCCCATGTCCACCTCCAGGACCACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| 3UTR CCA 72 bp | GCCAACCTGGCCTACTTAGTAAATTCCAGGCCAGCCTaGACTATAAAGACTCAAGAAACAAAACAAACACAA | + |
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Preference number: 3 (lower is better) Translates to: ANLAYLVNSRPA*TIKTQETKQTQ Trigger: TTGTGTTTGTTTTGTTTCTTGAGTCTTTATAGTCCAGGCTGGCCTGGAATTTACTAAGTAGGCCAGGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTGGAGTTCAAGCCAGCTaGCTCGCTCTCTTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: SQPELCPEWCPQEWQSRSGVQAS*LALFHA Trigger: GGCATGGAAGAGAGCGAGGCAGCTGGCTTGAACTCC...ACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTCTGAAGTGCAAGGCCTaGATATGTGGGGCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SQPELCPEWCPQEWQSRSLKCKA*ICGAPL Trigger: CAAAGGAGCCCCACATATGCAGGCCTTGCACTTCAG...ACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR GCA 90 bp | ACAGTGCTGACCCCTGGCACACTACCCAGCTCTTCACACACCAACACCTTCTGGCACCTGTATCCAGAATaGCCATGGAAACCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TVLTPGTLPSSSHTNTFWHLYPE*PWKPRR Trigger: TCTTCGGGGTTTCCATGGGCATTCTGGATACAGGTG...CCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR GCA 90 bp | CAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCTGAAGTGCAAGGCCTaGATATGTGGGGCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QVQERAQSQPELCPEWCPLKCKA*ICGAPL Trigger: CAAAGGAGCCCCACATATGCAGGCCTTGCACTTCAG...AGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR TCA 90 bp | AGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTTCTTGCAGAATGGCATaGGATAAAGACCAACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQPELCPEWCPQEWQSRSSCRMA*DKDQLW Trigger: CCACAGTTGGTCTTTATCTCATGCCATTCTGCAAGA...ACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTGAGAGTAGAGCTTTCTaGTCCTCTCTCTTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SQPELCPEWCPQEWQSRSESRAF*SSLFLV Trigger: AACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTC...ACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGCACCAGAAAGAAACATaGCACCAGGCTGCCAATGTT | + |
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Preference number: 4 (lower is better) Translates to: YKRLAQTRVTKGWPRLALHQKET*HQAANV Trigger: AACATTGGCAGCCTGGTGTCATGTTTCTTTCTGGTG...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR TCA 90 bp | CAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTATTACTGCTGTTGGCTaGAAAGGGCTCAGCAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVQERAQSQPELCPEWCPITAVG*KGLSNQ Trigger: CTGATTGCTGAGCCCTTTTCAGCCAACAGCAGTAAT...AGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGCACAGCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCGGAGTTCAAGCCAGCTaGCTCGCTCTCTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTAQHRSLLSKSAHFLQCGVQAS*LALFHA Trigger: GGCATGGAAGAGAGCGAGGCAGCTGGCTTGAACTCC...GCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTGCAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTCAGGAGTGGCAGTCACGCAGTTGCTGTCTTGCAGAATaGCATGAGATAAAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQPELCPEWCPQEWQSRSCCLAE*HEIKTN Trigger: GTTGGTCTTTATCTCATGCCATTCTGCAAGACAGCA...ACTGCGTGACTGCCACTCCTGAGGACACCATTCAGGGCAGAGCTCTGGCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGTCTTGCAGAATGGCATaGGATAAAGACCAACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKRLAQTRVTKGWPRLALSCRMA*DKDQLW Trigger: CCACAGTTGGTCTTTATCTCATGCCATTCTGCAAGA...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGGAAATAAAACAGCTGTaGATATGGCTGAGCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKRLAQTRVTKGWPRLALEIKQL*IWLSPD Trigger: GTCTGGGCTCAGCCATATTCACAGCTGTTTTATTTC...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGAAGAATTCCGATCACTaGAGGAATGGCCATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKRLAQTRVTKGWPRLALKNSDH*RNGHFS Trigger: GGAGAAATGGCCATTCCTGCAGTGATCGGAATTCTT...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | GCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCTGACCCCTGGCCTCGTTCCACTTCTCTaGATCGTCCTCCTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQVFAQQISSFSTVLTPGLVPLL*IVLLIL Trigger: GAGAATGAGGAGGACGATGCAGAGAAGTGGAACGAG...GCCAGGGGTCAGCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTGACCCCTGGCACACTACCCAGCTCTTCACACACCAACACCTTCTGGTGCTGTCTTGCAGAATaGCATGAGATAAAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLTPGTLPSSSHTNTFWCCLAE*HEIKTN Trigger: GTTGGTCTTTATCTCATGCCATTCTGCAAGACAGCA...CCAGAAGGTGTTGGTGTGTGAAGAGCTGGGTAGTGTGCCAGGGGTCAGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTGAGAGTAGAGCTTTCTaGTCCTCTCTCTTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQERAQSQPELCPEWCPESRAF*SSLFLV Trigger: AACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTC...AGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTTGACCATCCCATATCCAGAATGCCCATaGAAACCCCGAAGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QASSVTLVKLYSSSLTIPYPECP*KPRRQT Trigger: TGTCTGTCTTCGGGGTTTCCATGGGCATTCTGGATA...TGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCTAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCCCAGGCTAGCTCTGATTTCCCAGTTAAGGTaGTGTATTGCTCAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKRLAQTRVTKGWPRLALISQLR*CIAQSR Trigger: CCTGGATTGAGCAATACACCACCTTAACTGGGAAAT...CAGAGCTAGCCTGGGCCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGCACAGCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCCACCTGTATCCAGAATaGCCATGGAAACCCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAQHRSLLSKSAHFLQCHLYPE*PWKPRR Trigger: TCTTCGGGGTTTCCATGGGCATTCTGGATACAGGTG...GCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTGCAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCTTGTTCCTTTGTGCTaGCATTCCAGGGGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWLVPLC*HSRGKV Trigger: CACCTTGCCCCTGGAATGCCAGCACAAAGGAACAAG...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTGCACAGCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCCGTGTAGCTCAGAGCTaGAGAGTAGAGCTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTAQHRSLLSKSAHFLQCRVAQS*RVELSG Trigger: ACCAGAAAGCTCTACTCTCCAGCTCTGAGCTACACG...GCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTGCAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | GCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCTGACCCCTGGCGAGAATTACTGCTGTTaGCTGAAAAGGGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQVFAQQISSFSTVLTPGENYCC*LKRAQQ Trigger: TTGCTGAGCCCTTTTCAGCCAACAGCAGTAATTCTC...GCCAGGGGTCAGCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGTATCCAGAATGCCCATaGAAACCCCGAAGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWYPECP*KPRRQT Trigger: TGTCTGTCTTCGGGGTTTCCATGGGCATTCTGGATA...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAACAAAACAGTGAGTTAGAGGCCAACCTGGCCTACTTAGTAAATTCCCTTGTTCCTTTGTGCTaGCATTCCAGGGGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNSELEANLAYLVNSLVPLC*HSRGKV Trigger: CACCTTGCCCCTGGAATGCCAGCACAAAGGAACAAG...GGAATTTACTAAGTAGGCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGAAACAAAACAGTGAGTTAGAGGCCAACCTGGCCTACTTAGTAAATTCCCTCGTTCCACTTCTCTaGATCGTCCTCCTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNSELEANLAYLVNSLVPLL*IVLLIL Trigger: GAGAATGAGGAGGACGATGCAGAGAAGTGGAACGAG...GGAATTTACTAAGTAGGCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGTCCCAAGAGAATTACTaGTGTTGGCTGAAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWSQENY*CWLKRA Trigger: AGCCCTTTTCAGCCAACAGCAGTAATTCTCTTGGGA...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | ACCAACACCTTCTGGAAGGTGGAGACTACAAAACAGTCTCCTAACAAGATCCCAACACAGAGTCTGAGGTaGCTTCAAAGGATTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNTFWKVETTKQSPNKIPTQSLR*LQRIGS Trigger: TGAACCAATCCTTTGAAGCCACCTCAGACTCTGTGT...TGGGATCTTGTTAGGAGACTGTTTTGTAGTCTCCACCTTCCAGAAGGTGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| 3UTR CAA 72 bp | AGCTCTGTCACACTTGTGAAGCTGTACTCCTCATCCTaGACCATCCCACTGTCTTCCATCTTGATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVTLVKLYSSS*TIPLSSILIWF Trigger: AAACCAAATCAAGATGGAAGACAGTGGGATGGTCAAGGATGAGGAGTACAGCTTCACAAGTGTGACAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTCCAACCCTACACAGAGGGTAAAAGAAAACTATCTTCCCATCTCCAAAAAGGCGAAACTGAAGTaGAAGGCCTGCATATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQSNPTQRVKENYLPISKKAKLK*KACICG Trigger: CCCACATATGCAGGCCTTGCACTTCAGTTTCGCCTT...TTTGGAGATGGGAAGATAGTTTTCTTTTACCCTCTGTGTAGGGTTGGACTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGCGTGTAGCTCAGAGCTaGAGAGTAGAGCTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSRVAQS*RVELSG Trigger: ACCAGAAAGCTCTACTCTCCAGCTCTGAGCTACACG...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| 3UTR CAA 72 bp | TACTCCTCATCCTTGACCATCCCACTGTCTTCCATCTaGATTTGGTTTCCAGGTACTTCAAACTCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSLTIPLSSI*IWFPGTSNSWS Trigger: ACTCCATGAGTTTGAAGTACCTGGAAACCAAATCAAGATGGAAGACAGTGGGATGGTCAAGGATGAGGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR TCA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGCACCAGAAAGAAACATaGCACCAGGCTGCCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSHQKET*HQAANV Trigger: AACATTGGCAGCCTGGTGTCATGTTTCTTTCTGGTG...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR TCA 90 bp | TTTCAGTCCAACCCTACACAGAGGGTAAAAGAAAACTATCTTCCCATCTCCAAAATTACTGCTGTTGGCTaGAAAGGGCTCAGCAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQSNPTQRVKENYLPISKITAVG*KGLSNQ Trigger: CTGATTGCTGAGCCCTTTTCAGCCAACAGCAGTAAT...TTTGGAGATGGGAAGATAGTTTTCTTTTACCCTCTGTGTAGGGTTGGACTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAACAAAACAGTGAGTTAGAGGCCAACCTGGCCTACTTAGTAAATTCCATTTCCCAGTTAAGGTaGTGTATTGCTCAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKQNSELEANLAYLVNSISQLR*CIAQSR Trigger: CCTGGATTGAGCAATACACCACCTTAACTGGGAAAT...GGAATTTACTAAGTAGGCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGGAGAATTACTGCTGTTaGCTGAAAAGGGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSENYCC*LKRAQQ Trigger: TTGCTGAGCCCTTTTCAGCCAACAGCAGTAATTCTC...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR GCA 90 bp | CAAACACAATCCCTGGAGGTTAAAAATAATCTCATTGCATTTCTAGAATCACAGTCCCAAGAGAATTACTaGTGTTGGCTGAAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTQSLEVKNNLIAFLESQSQENY*CWLKRA Trigger: AGCCCTTTTCAGCCAACAGCAGTAATTCTCTTGGGA...CTGTGATTCTAGAAATGCAATGAGATTATTTTTAACCTCCAGGGATTGTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTGAAACGTGGCTGCCATaGAGGCTCCATACACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVQERAQSQPELCPEWCPETWLP*RLHTQK Trigger: CTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTC...AGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS TCA 90 bp | GTATTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTaGGGCTCCATACACAGAAGTCGCTATCCAGAGACAAAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLNPGDAAGKRGCH*GSIHRSRYPETKRA Trigger: AGCCCTCTTTGTCTCTGGATAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS CCA 90 bp | GGGCCGCGCCAATTACAAAGAATGCTGCAGATTTCCCAGTTAAGGTaGTGTATTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPRQLQRMLQISQLR*CIAQSRRCRWETWL Trigger: CAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGAAATCTGCAGCATTCTTTGTAATTGGCGCGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS CCA 90 bp | GCAGATCTGGGTACTGTCCCTGAAGAATTCCGATCACTGCAGGAATaGCCATTTCTCCCAGGGCCGCGCCAATTACAAAGAATGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ADLGTVPEEFRSLQE*PFLPGPRQLQRMLQ Trigger: CTGCAGCATTCTTTGTAATTGGCGCGGCCCTGGGAGAAATGGCCATTCCTGCAGTGATCGGAATTCTTCAGGGACAGTACCCAGATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS CCA 90 bp | TCTTCCTCACAGTCGTGTAGCTCAGAGCTGGAGAGTAGAGCTTTCTaGTCCTCTCTCTTCCTTGTTCCTTTGTGCTGGCATTCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSCSSELESRAF*SSLFLVPLCWHSRG Trigger: GCCCCTGGAATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTCCAGCTCTGAGCTACACGACTGTGAGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS GCA 90 bp | CTGCAGATTTCCCAGTTAAGGTGGTGTATTGCTCAATCCAGGAGATaGCGCTGGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQISQLRWCIAQSRR*RWETWLPLRLHTQK Trigger: CTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGAAATCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS CCA 90 bp | TTAAGGTGGTGTATTGCTCAATCCAGGAGATGCCGCTGGGAAACGTaGCTGCCATTGAGGCTCCATACACAGAAGTCGCTATCCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRWCIAQSRRCRWET*LPLRLHTQKSLSRD Trigger: GTCTCTGGATAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CAA 90 bp | GCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCTGACCCCTGGCCTCTACAAGTCTCCCTaGCAGACTCCTGAACGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AQVFAQQISSFSTVLTPGLYKSP*QTPERD Trigger: ATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAG...GCCAGGGGTCAGCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS GCA 90 bp | AACTACTGGCAGATCTGGGTACTGTCCCTGAAGAATTCCGATCACTaGAGGAATGGCCATTTCTCCCAGGGCCGCGCCAATTACAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NYWQIWVLSLKNSDH*RNGHFSQGRANYKE Trigger: TTCTTTGTAATTGGCGCGGCCCTGGGAGAAATGGCCATTCCTGCAGTGATCGGAATTCTTCAGGGACAGTACCCAGATCTGCCAGTAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS CCA 90 bp | ATTTCCCAGTTAAGGTGGTGTATTGCTCAATCCAGGAGATGCCGCTaGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAGTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ISQLRWCIAQSRRCR*ETWLPLRLHTQKSL Trigger: TAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCAAGAGCGTGCTCAAAGTCAGCCAGAGCTCTGCCCTGAATGGTGTCCTAATTCTGAGCAGATGTaGTTGTACCCCAGGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QVQERAQSQPELCPEWCPNSEQM*LYPRPI Trigger: AATTGGCCTGGGGTACAACAACATCTGCTCAGAATT...AGGACACCATTCAGGGCAGAGCTCTGGCTGACTTTGAGCACGCTCTTGCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS GCA 90 bp | ATCCAGAAGGACCTGACCAGAGCCCTCTTCTCTACAAGTCTCCCTTaGAGACTCCTGAACGGGATCACTCATTTCAACCACCTCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: IQKDLTRALFSTSLP*RLLNGITHFNHLKI Trigger: GATTTTGAGGTGGTTGAAATGAGTGATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAGAAGAGGGCTCTGGTCAGGTCCTTCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTGCACAGCACAGGTCTTTGCTCAGCAAATCAGCTCATTTTCTACAGTGCCTCTACAAGTCTCCCTaGCAGACTCCTGAACGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTAQHRSLLSKSAHFLQCLYKSP*QTPERD Trigger: ATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAG...GCACTGTAGAAAATGAGCTGATTTGCTGAGCAAAGACCTGTGCTGTGCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
||
| CDS GCA 90 bp | CCAATTACAAAGAATGCTGCAGATTTCCCAGTTAAGGTGGTGTATTaGTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PITKNAADFPVKVVY*SIQEMPLGNVAAIE Trigger: CTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGAAATCTGCAGCATTCTTTGTAATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS GCA 90 bp | CTGGAGAGTAGAGCTTTCTGGTCCTCTCTCTTCCTTGTTCCTTTGTaGTGGCATTCCAGGGGCAAGGTGGCTAATTTATACATCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LESRAFWSSLFLVPL*WHSRGKVANLYITG Trigger: TCCTGTGATGTATAAATTAGCCACCTTGCCCCTGGAATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 90 bp | ATCCCTTTTGTCCTGATGATTCCCAAGAGAATTACTGCTGTTGGCTaGAAAGGGCTCAGCAATCAGTCCATCCAGAAGGACCTGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: IPFVLMIPKRITAVG*KGLSNQSIQKDLTR Trigger: TCTGGTCAGGTCCTTCTGGATGGACTGATTGCTGAGCCCTTTTCAGCCAACAGCAGTAATTCTCTTGGGAATCATCAGGACAAAAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAAGTCATTTACAAAAGGTTGGCCCAGACTAGAGTCACCAAAGGCTGGCAGGCTGTAAGAATGTaGCAAAGAAGATGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LEKVIYKRLAQTRVTKGWQAVRM*QRRWPG Trigger: GCCTGGCCATCTTCTTTGCAACATTCTTACAGCCTG...CCAGCCTTTGGTGACTCTAGTCTGGGCCAACCTTTTGTAAATGACTTTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 90 bp | GAGAGTAGAGCTTTCTGGTCCTCTCTCTTCCTTGTTCCTTTGTGCTaGCATTCCAGGGGCAAGGTGGCTAATTTATACATCACAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: ESRAFWSSLFLVPLC*HSRGKVANLYITGN Trigger: ATTTCCTGTGATGTATAAATTAGCCACCTTGCCCCTGGAATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CAA 90 bp | AGACAGAAACAAAACAGTGAGTTAGAGGCCAACCTGGCCTACTTAGTAAATTCCCAGGCTGTAAGAATGTaGCAAAGAAGATGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RQKQNSELEANLAYLVNSQAVRM*QRRWPG Trigger: GCCTGGCCATCTTCTTTGCAACATTCTTACAGCCTG...GGAATTTACTAAGTAGGCCAGGTTGGCCTCTAACTCACTGTTTTGTTTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGTCCAACCCTACACAGAGGGTAAAAGAAAACTATCTTCCCATCTCCAAAGGTCCTCTCTCTTCCTaGTTCCTTTGTGCTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: FQSNPTQRVKENYLPISKGPLSS*FLCAGI Trigger: AATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACC...TTTGGAGATGGGAAGATAGTTTTCTTTTACCCTCTGTGTAGGGTTGGACTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CAA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGGGTCCTCTCTCTTCCTaGTTCCTTTGTGCTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSGPLSS*FLCAGI Trigger: AATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACC...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS-3UTR CAA 90 bp | AAGAAAACTATCTTCCCATCTCCAAAGATGCTCTTTGTCATGACAAATGGCTCGAATTCTGAGCAGATGTaGTTGTACCCCAGGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: KKTIFPSPKMLFVMTNGSNSEQM*LYPRPI Trigger: AATTGGCCTGGGGTACAACAACATCTGCTCAGAATT...CGAGCCATTTGTCATGACAAAGAGCATCTTTGGAGATGGGAAGATAGTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS GCA 72 bp | CAGATCTGGGTACTGTCCCTGAAGAATTCCGATCACTaGAGGAATGGCCATTTCTCCCAGGGCCGCGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: QIWVLSLKNSDH*RNGHFSQGRAN Trigger: ATTGGCGCGGCCCTGGGAGAAATGGCCATTCCTGCAGTGATCGGAATTCTTCAGGGACAGTACCCAGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CAA 72 bp | CAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATaGAGGCTCCATACACAGAAGTCGCTATCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: QSRRCRWETWLP*RLHTQKSLSRD Trigger: GTCTCTGGATAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 72 bp | AATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTaGGGCTCCATACACAGAAGTCGCTATCCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: NPGDAAGKRGCH*GSIHRSRYPET Trigger: TGTCTCTGGATAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS GCA 72 bp | TCCCAGTTAAGGTGGTGTATTGCTCAATCCAGGAGATaGCGCTGGGAAACGTGGCTGCCATTGAGGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SQLRWCIAQSRR*RWETWLPLRLH Trigger: ATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CAA 90 bp | TGTATTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATaGAGGCTCCATACACAGAAGTCGCTATCCAGAGACAAAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CIAQSRRCRWETWLP*RLHTQKSLSRDKEG Trigger: GCCCTCTTTGTCTCTGGATAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 72 bp | AAGAAGAAGAGGAAGAGCAGGCATAGGAGGGCCCTGTaGTATTTAGCCCTTCGAGCTCCCTCAGCAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: KKKRKSRHRRAL*YLALRAPSADA Trigger: AGCATCTGCTGAGGGAGCTCGAAGGGCTAAATATCACAGGGCCCTCCTATGCCTGCTCTTCCTCTTCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 72 bp | ACTGCGAACACAGAGTCTGAGGTGGCTTCAAAGGATTaGTTCAAGGCTAAACGGTCAGATTGGGGCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TANTESEVASKD*FKAKRSDWGSV Trigger: CACCGAGCCCCAATCTGACCGTTTAGCCTTGAACCAATCCTTTGAAGCCACCTCAGACTCTGTGTTCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 72 bp | TGTATTGCTCAATCCAGGAGATGCCGCTGGGAAACGTaGCTGCCATTGAGGCTCCATACACAGAAGTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: CIAQSRRCRWET*LPLRLHTQKSL Trigger: TAGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 72 bp | TTAAGGTGGTGTATTGCTCAATCCAGGAGATGCCGCTaGGAAACGTGGCTGCCATTGAGGCTCCATACACAG | + |
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Preference number: 6 (lower is better) Translates to: LRWCIAQSRRCR*ETWLPLRLHTQ Trigger: CTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CAA 72 bp | GGACCTGACCAGAGCCCTCTTCTCTACAAGTCTCCCTaGCAGACTCCTGAACGGGATCACTCATTTCAACCA | + |
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Preference number: 6 (lower is better) Translates to: GPDQSPLLYKSP*QTPERDHSFQP Trigger: TGGTTGAAATGAGTGATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAGAAGAGGGCTCTGGTCAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 72 bp | CCAGAATGCCCATGGAAACCCCGAAGACAGACATCATaGCAATCAGTAGGGCTGCTGTCTTGCAGAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: PECPWKPRRQTS*QSVGLLSCRMA Trigger: TGCCATTCTGCAAGACAGCAGCCCTACTGATTGTCATGATGTCTGTCTTCGGGGTTTCCATGGGCATTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 72 bp | CAGTCGTGTAGCTCAGAGCTGGAGAGTAGAGCTTTCTaGTCCTCTCTCTTCCTTGTTCCTTTGTGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: QSCSSELESRAF*SSLFLVPLCWH Trigger: ATGCCAGCACAAAGGAACAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTCCAGCTCTGAGCTACACGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CCA 72 bp | CCTCATTCTCTTCCTCACAGTCGTGTAGCTCAGAGCTaGAGAGTAGAGCTTTCTGGTCCTCTCTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PHSLPHSRVAQS*RVELSGPLSSL Trigger: CAAGGAAGAGAGAGGACCAGAAAGCTCTACTCTCCAGCTCTGAGCTACACGACTGTGAGGAAGAGAATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS CAA 90 bp | CATCCAGAAGGACCTGACCAGAGCCCTCTTCTCTACAAGTCTCCCTaGCAGACTCCTGAACGGGATCACTCATTTCAACCACCTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: HPEGPDQSPLLYKSP*QTPERDHSFQPPQN Trigger: ATTTTGAGGTGGTTGAAATGAGTGATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAGAAGAGGGCTCTGGTCAGGTCCTTCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 72 bp | GAGCCCTCTTCTCTACAAGTCTCCCTTGCAGACTCCTaGACGGGATCACTCATTTCAACCACCTCAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: EPSSLQVSLADS*TGSLISTTSKS Trigger: GGATTTTGAGGTGGTTGAAATGAGTGATCCCGTTCAGGAGTCTGCAAGGGAGACTTGTAGAGAAGAGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS GCA 72 bp | AAGAATGCTGCAGATTTCCCAGTTAAGGTGGTGTATTaGTCAATCCAGGAGATGCCGCTGGGAAACGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KNAADFPVKVVY*SIQEMPLGNVA Trigger: AGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAATACACCACCTTAACTGGGAAATCTGCAGCATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS TCA 72 bp | GTCCTGATGATTCCCAAGAGAATTACTGCTGTTGGCTaGAAAGGGCTCAGCAATCAGTCCATCCAGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VLMIPKRITAVG*KGLSNQSIQKD Trigger: GTCCTTCTGGATGGACTGATTGCTGAGCCCTTTTCAGCCAACAGCAGTAATTCTCTTGGGAATCATCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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| CDS GCA 72 bp | AATCCCTTTTGTCCTGATGATTCCCAAGAGAATTACTaGTGTTGGCTGAAAAGGGCTCAGCAATCAGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: NPFCPDDSQENY*CWLKRAQQSVH Trigger: ATGGACTGATTGCTGAGCCCTTTTCAGCCAACAGCAGTAATTCTCTTGGGAATCATCAGGACAAAAGGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178045.9 ENSMUST00000178563.3 |
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