Pregenerated sensors for MFSD4B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038522Ensembl transcript IDs: ENSMUST00000163705.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGATTTCACAAGCACATGGTAGAATGTGGGTGGGTGGTCACTGCTaGGAAAACCCAGCTGATATATCAGAATGCCCACAGCTTCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: KISQAHGRMWVGGHC*ENPADISECPQLPN Trigger: GTTGGGAAGCTGTGGGCATTCTGATATATCAGCTGGGTTTTCTCAGCAGTGACCACCCACCCACATTCTACCATGTGCTTGTGAAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR CCA 90 bp | CTCTGTGGGCTCCATCACAACATCTCCAGACGTCTCCATTACACATaGCCTCAAGGACCACTCACTGCAACTTCAAAATCTGTTTCATTC | + |
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Preference number: 1 (lower is better) Translates to: LCGLHHNISRRLHYT*PQGPLTATSKSVSF Trigger: GAATGAAACAGATTTTGAAGTTGCAGTGAGTGGTCCTTGAGGCCATGTGTAATGGAGACGTCTGGAGATGTTGTGATGGAGCCCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 90 bp | GATATGACTCAGAGCCCCCAGGAGGACCTGAAAGCAGAGCCATGTTaGAGAGCTATGCATAACTTAAATCCTGCTCTGTGTTTCCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: DMTQSPQEDLKAEPC*RAMHNLNPALCFLC Trigger: ACAAAGGAAACACAGAGCAGGATTTAAGTTATGCATAGCTCTTCAACATGGCTCTGCTTTCAGGTCCTCCTGGGGGCTCTGAGTCATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 90 bp | CTCTGGCATGCTGTGACCCAGGTCTACAGCAGTTATAGCAACATCTaGCTCTTACAAGAAAGATTTCACAAGCACATGGTAGAATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LWHAVTQVYSSYSNI*LLQERFHKHMVECG Trigger: CCCACATTCTACCATGTGCTTGTGAAATCTTTCTTGTAAGAGTCAGATGTTGCTATAACTGCTGTAGACCTGGGTCACAGCATGCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR-3UTR GCA 90 bp | AAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCAGGTCTACAGGCTGATATATCAGAATaGCCACAGCTTCCCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: KNLKSVFVTLACCDPGLQADISE*PQLPNL Trigger: GAGGTTGGGAAGCTGTGGGCATTCTGATATATCAGC...CTGTAGACCTGGGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACATGGTAGAATGTGGGTaGGTGGTCACTGCTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LCSSKNLKSVFVTLACCDMVECG*VVTAEK Trigger: TTTCTCAGCAGTGACCACCCACCCACATTCTACCAT...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR-3UTR GCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGTCAAGGACCACTCACTaGAACTTCAAAATCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGSRTTH*NFKICF Trigger: GAAACAGATTTTGAAGTTGCAGTGAGTGGTCCTTGA...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCAGGTCTACAGAGCACCAATAGGTTTTaGAAAAATCTTCACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KNLKSVFVTLACCDPGLQSTNRF*KNLHFP Trigger: TGGAAAGTGAAGATTTTTCCAAAACCTATTGGTGCT...CTGTAGACCTGGGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 72 bp | AATGTGGGTGGGTGGTCACTGCTGAGAAAACCCAGCTaGTATATCAGAATGCCCACAGCTTCCCAACCTCCT | + |
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Preference number: 3 (lower is better) Translates to: NVGGWSLLRKPS*YIRMPTASQPP Trigger: AGGAGGTTGGGAAGCTGTGGGCATTCTGATATATCAGCTGGGTTTTCTCAGCAGTGACCACCCACCCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 72 bp | AAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTaGCCCAGGTCTACAGCAGTTATAGCAACATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: KSEIGLCHSGML*PRSTAVIATSD Trigger: GTCAGATGTTGCTATAACTGCTGTAGACCTGGGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 72 bp | ATCCTGCTCTGTGTTTCCTTTGTAGCAGTAAAAATCTaGAATCGGTCTTTGTCACTCTGGCATGCTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: ILLCVSFVAVKI*NRSLSLWHAVT Trigger: GGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAGGAAACACAGAGCAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR CCA 72 bp | CAAGAAAGATTTCACAAGCACATGGTAGAATGTGGGTaGGTGGTCACTGCTGAGAAAACCCAGCTGATATAT | + |
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Preference number: 3 (lower is better) Translates to: QERFHKHMVECG*VVTAEKTQLIY Trigger: ATATATCAGCTGGGTTTTCTCAGCAGTGACCACCCACCCACATTCTACCATGTGCTTGTGAAATCTTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 72 bp | GCTGTGACCCAGGTCTACAGCAGTTATAGCAACATCTaGCTCTTACAAGAAAGATTTCACAAGCACATGGTA | + |
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Preference number: 3 (lower is better) Translates to: AVTQVYSSYSNI*LLQERFHKHMV Trigger: TACCATGTGCTTGTGAAATCTTTCTTGTAAGAGTCAGATGTTGCTATAACTGCTGTAGACCTGGGTCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| 3UTR TCA 72 bp | ATTATCAATTTAGGAATCATCTTATCTTCAGGGATATaGCCTAGAGGATATGACTCAGAGCCCCCAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: IINLGIILSSGI*PRGYDSEPPGG Trigger: TCCTCCTGGGGGCTCTGAGTCATATCCTCTAGGTCATATCCCTGAAGATAAGATGATTCCTAAATTGATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGCCCCGCCAATCATGGTaGCAGACAAGAACCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGPRQSW*QTRTQW Trigger: CCACTGGGTTCTTGTCTGGCACCATGATTGGCGGGG...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR TCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACGACTCGGTGTGGTTCTaGGCAGGTGCTGTACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDDSVWF*AGAVPQ Trigger: CTGGGGTACAGCACCTGCTCAGAACCACACCGAGTC...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCTCGCTCTCTTCCATaGCAACATGGGTGGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDPRSLP*QHGWWR Trigger: TCGCCACCACCCATGTTGGCATGGAAGAGAGCGAGG...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | TACACATGGCCTCAAGGACCACTCACTGCAACTTCAAAATCTGTTTCATTCCTTATGTCGCAAAGAAGATaGCCAGGCCCCTGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YTWPQGPLTATSKSVSFLMSQRR*PGPCRL Trigger: CAGCCTGCAGGGGCCTGGCCATCTTCTTTGCGACAT...AAGGAATGAAACAGATTTTGAAGTTGCAGTGAGTGGTCCTTGAGGCCATGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | TACACATGGCCTCAAGGACCACTCACTGCAACTTCAAAATCTGTTTCATTCCTTCGATCACCGCTGGAATaGCCATATCTCCCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YTWPQGPLTATSKSVSFLRSPLE*PYLPGQ Trigger: CTGCCCTGGGAGATATGGCCATTCCAGCGGTGATCG...AAGGAATGAAACAGATTTTGAAGTTGCAGTGAGTGGTCCTTGAGGCCATGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR TCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGTTCTCTGCCAGGTCTTaGAATGTGGGTCCCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGFSARS*NVGPRI Trigger: TATCCTGGGACCCACATTTCAAGACCTGGCAGAGAA...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGAAGGCGAAACTGAAGTaGAAGGCCTGCATTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGKAKLK*KACICG Trigger: CCCACAAATGCAGGCCTTGCACTTCAGTTTCGCCTT...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGAACATGAGACCAGGCTaGCAATGTTGCTCAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGNMRPG*QCCSAR Trigger: TCGTGCTGAGCAACATTGGCAGCCTGGTCTCATGTT...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGGTTAAGGTGGTGTACTaGTCAATCCAGGAGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGVKVVY*SIQEMP Trigger: CGGCATCTCCTGGATTGAGCAGTACACCACCTTAAC...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | AAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCAGGTCTACAGTCTTCCATGCCAACATaGGTGGTGGCGAAGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KNLKSVFVTLACCDPGLQSSMPT*VVAKEN Trigger: ATTCTCCTTCGCCACCACCCATGTTGGCATGGAAGA...CTGTAGACCTGGGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR TCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCACCCAAGGCGAAACTaGAGTGCAAGGCCTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDHPRRN*SARPAF Trigger: AAATGCAGGCCTTGCACTTCAGTTTCGCCTTGGGTG...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | TACACATGGCCTCAAGGACCACTCACTGCAACTTCAAAATCTGTTTCATTCCTTCTGAAGTGCAAGGCCTaGATTTGTGGGGCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YTWPQGPLTATSKSVSFLLKCKA*ICGAPL Trigger: CAAAGGAGCCCCACAAATGCAGGCCTTGCACTTCAG...AAGGAATGAAACAGATTTTGAAGTTGCAGTGAGTGGTCCTTGAGGCCATGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR GCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCAGGCTGCCAATGTTaGTCAGCACGATCATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDPGCQC*SARSWF Trigger: GAACCATGATCGTGCTGAGCAACATTGGCAGCCTGG...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | AAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACCCAGGTCTACAGTGCTCAGCACGATCATaGTTCCAGGCTGTAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: KNLKSVFVTLACCDPGLQCSARS*FQAVRM Trigger: CATTCTTACAGCCTGGAACCATGATCGTGCTGAGCA...CTGTAGACCTGGGTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGATTTCCCAGTTAAGGTaGTGTACTGCTCAATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGISQLR*CTAQSR Trigger: CCTGGATTGAGCAGTACACCACCTTAACTGGGAAAT...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR TCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACTGCAGTTGCCACCATTaGGGCTCCCAAAAGAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDCSCHH*GSQKKE Trigger: TTCTTTCTTTTGGGAGCCTCAATGGTGGCAACTGCA...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CCA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACAACTACTGGCAGATCTaGGTAGTGTCCCTGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LCSSKNLKSVFVTLACCDNYWQI*VVSLKN Trigger: ATTCTTCAGGGACACTACCCAGATCTGCCAGTAGTT...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 90 bp | GATCGGTTCAGCATCAGAGTGTCAAGGTCGGACTCGGTGTGGTTCTaGGCAGGTGCTGTACCCCAGGCCAACTTAGCCAGCAGGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: DRFSIRVSRSDSVWF*AGAVPQANLASRGA Trigger: GGCTCCCCTGCTGGCTAAGTTGGCCTGGGGTACAGCACCTGCTCAGAACCACACCGAGTCCGACCTTGACACTCTGATGCTGAACCGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 90 bp | GTACTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTaGGGCTCCATACACAGAAGTCGCGATCCAGAGACAAAGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VLLNPGDAAGKRGCH*GSIHRSRDPETKRA Trigger: AGCCCTCTTTGTCTCTGGATCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 90 bp | TTAAGGTGGTGTACTGCTCAATCCAGGAGATGCCGCTGGGAAACGTaGCTGCCATTGAGGCTCCATACACAGAAGTCGCGATCCAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LRWCTAQSRRCRWET*LPLRLHTQKSRSRD Trigger: GTCTCTGGATCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 90 bp | CTGCAGATTTCCCAGTTAAGGTGGTGTACTGCTCAATCCAGGAGATaGCGCTGGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LQISQLRWCTAQSRR*RWETWLPLRLHTQK Trigger: CTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAATCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 90 bp | ATTTCCCAGTTAAGGTGGTGTACTGCTCAATCCAGGAGATGCCGCTaGGAAACGTGGCTGCCATTGAGGCTCCATACACAGAAGTCGCGA | + |
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Preference number: 5 (lower is better) Translates to: ISQLRWCTAQSRRCR*ETWLPLRLHTQKSR Trigger: TCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 90 bp | GGGCAGAGCCAATTACAAAGAATGCTGCAGATTTCCCAGTTAAGGTaGTGTACTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GQSQLQRMLQISQLR*CTAQSRRCRWETWL Trigger: CAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAATCTGCAGCATTCTTTGTAATTGGCTCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 90 bp | GCAGATCTGGGTAGTGTCCCTGAAGAATTCCGATCACCGCTGGAATaGCCATATCTCCCAGGGCAGAGCCAATTACAAAGAATGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ADLGSVPEEFRSPLE*PYLPGQSQLQRMLQ Trigger: CTGCAGCATTCTTTGTAATTGGCTCTGCCCTGGGAGATATGGCCATTCCAGCGGTGATCGGAATTCTTCAGGGACACTACCCAGATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 90 bp | TACTGGCAGATCTGGGTAGTGTCCCTGAAGAATTCCGATCACCGCTaGAATGGCCATATCTCCCAGGGCAGAGCCAATTACAAAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: YWQIWVVSLKNSDHR*NGHISQGRANYKEC Trigger: GCATTCTTTGTAATTGGCTCTGCCCTGGGAGATATGGCCATTCCAGCGGTGATCGGAATTCTTCAGGGACACTACCCAGATCTGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 90 bp | CCAATTACAAAGAATGCTGCAGATTTCCCAGTTAAGGTGGTGTACTaGTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTGAG | + |
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Preference number: 5 (lower is better) Translates to: PITKNAADFPVKVVY*SIQEMPLGNVAAIE Trigger: CTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAATCTGCAGCATTCTTTGTAATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CAA 90 bp | CTTTGTAGCAGTAAAAATCTGAAATCGGTCTTTGTCACTCTGGCATGCTGTGACGTGCAAGGCCTGCATTaGTGGGGCTCCTTTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LCSSKNLKSVFVTLACCDVQGLH*WGSFVP Trigger: GGGGACAAAGGAGCCCCACAAATGCAGGCCTTGCAC...GTCACAGCATGCCAGAGTGACAAAGACCGATTTCAGATTTTTACTGCTACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CAA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGATTCTCTGCCAGGTCTaGAAATGTGGGTCCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGILCQV*KCGSQD Trigger: ATCCTGGGACCCACATTTCAAGACCTGGCAGAGAAT...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS-3UTR CAA 90 bp | GTAATTCATTCTCTCTCAGTATATGTCCCTTTTGTCCAGGTGTGTCTCAGGGGGCTGCAGTTGCCACCATaGAGGCTCCCAAAAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: VIHSLSVYVPFVQVCLRGLQLPP*RLPKER Trigger: TCTTTCTTTTGGGAGCCTCAATGGTGGCAACTGCAG...CCCCCTGAGACACACCTGGACAAAAGGGACATATACTGAGAGAGAATGAATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 72 bp | AGCATCAGAGTGTCAAGGTCGGACTCGGTGTGGTTCTaGGCAGGTGCTGTACCCCAGGCCAACTTAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SIRVSRSDSVWF*AGAVPQANLAS Trigger: GCTGGCTAAGTTGGCCTGGGGTACAGCACCTGCTCAGAACCACACCGAGTCCGACCTTGACACTCTGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | CATCGGGTACCGCAAACACGGAGTCTGAGGTGCCGTTaGAGGATCGGTTCAGCATCAGAGTGTCAAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: HRVPQTRSLRCR*RIGSASECQGR Trigger: CCGACCTTGACACTCTGATGCTGAACCGATCCTCCAACGGCACCTCAGACTCCGTGTTTGCGGTACCCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CAA 72 bp | TCATCGGGTACCGCAAACACGGAGTCTGAGGTGCCGTaGGAGGATCGGTTCAGCATCAGAGTGTCAAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SSGTANTESEVP*EDRFSIRVSRS Trigger: CGACCTTGACACTCTGATGCTGAACCGATCCTCCAACGGCACCTCAGACTCCGTGTTTGCGGTACCCGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CAA 72 bp | CAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATaGAGGCTCCATACACAGAAGTCGCGATCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: QSRRCRWETWLP*RLHTQKSRSRD Trigger: GTCTCTGGATCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CAA 90 bp | TGTACTGCTCAATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATaGAGGCTCCATACACAGAAGTCGCGATCCAGAGACAAAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CTAQSRRCRWETWLP*RLHTQKSRSRDKEG Trigger: GCCCTCTTTGTCTCTGGATCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 72 bp | AATCCAGGAGATGCCGCTGGGAAACGTGGCTGCCATTaGGGCTCCATACACAGAAGTCGCGATCCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: NPGDAAGKRGCH*GSIHRSRDPET Trigger: TGTCTCTGGATCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 72 bp | TCCCAGTTAAGGTGGTGTACTGCTCAATCCAGGAGATaGCGCTGGGAAACGTGGCTGCCATTGAGGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SQLRWCTAQSRR*RWETWLPLRLH Trigger: ATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | TGTACTGCTCAATCCAGGAGATGCCGCTGGGAAACGTaGCTGCCATTGAGGCTCCATACACAGAAGTCGCGA | + |
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Preference number: 6 (lower is better) Translates to: CTAQSRRCRWET*LPLRLHTQKSR Trigger: TCGCGACTTCTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 72 bp | TCATGTCATCGGGTACCGCAAACACGGAGTCTGAGGTaGCGTTGGAGGATCGGTTCAGCATCAGAGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SCHRVPQTRSLR*RWRIGSASECQ Trigger: TTGACACTCTGATGCTGAACCGATCCTCCAACGGCACCTCAGACTCCGTGTTTGCGGTACCCGATGACATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | TTAAGGTGGTGTACTGCTCAATCCAGGAGATGCCGCTaGGAAACGTGGCTGCCATTGAGGCTCCATACACAG | + |
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Preference number: 6 (lower is better) Translates to: LRWCTAQSRRCR*ETWLPLRLHTQ Trigger: CTGTGTATGGAGCCTCAATGGCAGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | ATCTGGGTAGTGTCCCTGAAGAATTCCGATCACCGCTaGAATGGCCATATCTCCCAGGGCAGAGCCAATTAC | + |
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Preference number: 6 (lower is better) Translates to: IWVVSLKNSDHR*NGHISQGRANY Trigger: GTAATTGGCTCTGCCCTGGGAGATATGGCCATTCCAGCGGTGATCGGAATTCTTCAGGGACACTACCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 72 bp | AGATGGAATTCAAGCCAGCTGCCTCGCTCTCTTCCATaGCAACATGGGTGGTGGCGAAGGAGAATATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RWNSSQLPRSLP*QHGWWRRRICK Trigger: CTTACATATTCTCCTTCGCCACCACCCATGTTGGCATGGAAGAGAGCGAGGCAGCTGGCTTGAATTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS GCA 72 bp | AAGAATGCTGCAGATTTCCCAGTTAAGGTGGTGTACTaGTCAATCCAGGAGATGCCGCTGGGAAACGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KNAADFPVKVVY*SIQEMPLGNVA Trigger: AGCCACGTTTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAATCTGCAGCATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | GGTAGTGTCCCTGAAGAATTCCGATCACCGCTGGAATaGCCATATCTCCCAGGGCAGAGCCAATTACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GSVPEEFRSPLE*PYLPGQSQLQR Trigger: TCTTTGTAATTGGCTCTGCCCTGGGAGATATGGCCATTCCAGCGGTGATCGGAATTCTTCAGGGACACTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 72 bp | CGGGATGAGATAAAGTCCCGCTGCAGTTGCCACCATTaGGGCTCCCAAAAGAAAGAATTGATTTATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RDEIKSRCSCHH*GSQKKELIYVV Trigger: GACCACATAAATCAATTCTTTCTTTTGGGAGCCTCAATGGTGGCAACTGCAGCGGGACTTTATCTCATCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS CCA 72 bp | CAATTACAAAGAATGCTGCAGATTTCCCAGTTAAGGTaGTGTACTGCTCAATCCAGGAGATGCCGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: QLQRMLQISQLR*CTAQSRRCRWE Trigger: TTCCCAGCGGCATCTCCTGGATTGAGCAGTACACCACCTTAACTGGGAAATCTGCAGCATTCTTTGTAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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| CDS TCA 72 bp | GCAGTTGCCACCATTGAGGCTCCCAAAAGAAAGAATTaGTTTATGTGGTCAAAGAGAACCCCGCCAATCATG | + |
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Preference number: 6 (lower is better) Translates to: AVATIEAPKRKN*FMWSKRTPPIM Trigger: CATGATTGGCGGGGTTCTCTTTGACCACATAAATCAATTCTTTCTTTTGGGAGCCTCAATGGTGGCAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163705.3 |
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