Pregenerated sensors for MFSD2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028655Ensembl transcript IDs: ENSMUST00000030408.12, ENSMUST00000127047.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGGGCAGGCAGTGAGGAGGTGACAGAGCGGTCAGCCTTGCAGTaGGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCTTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QWAGSEEVTERSALQ*AQMSWSAHPPLLGP Trigger: GGGACCAAGGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCTCTGTCACCTCCTCACTGCCTGCCCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR GCA 90 bp | TGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTGGTaGCCCAGGTCCTTTGTGTGGTGGCTTCAGGCACCCTGGCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: CSVQGQRDPVLNATW*PRSFVWWLQAPWQV Trigger: GACTTGCCAGGGTGCCTGAAGCCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR CCA 90 bp | AGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTaGTGCCCCAGGTCCTTTGTGTGGTGGCTTCAGGCACCCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SCSVQGQRDPVLNAT*CPRSFVWWLQAPWQ Trigger: TTGCCAGGGTGCCTGAAGCCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR TCA 90 bp | ACAGATGTCCTGGTCCGCTCACCCTCCACTCCTTGGTCCCTGTCTTaGCATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCC | + |
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Preference number: 1 (lower is better) Translates to: TDVLVRSPSTPWSLS*HRKNSCSVQGQRDP Trigger: GGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTCAAGACAGGGACCAAGGAGTGGAGGGTGAGCGGACCAGGACATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR GCA 90 bp | CCACTCCTTGGTCCCTGTCTTGACATAGGAAGAACAGCTGCTCAGTaGAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PLLGPCLDIGRTAAQ*KGKEIPCLMLPGAP Trigger: TGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTCAAGACAGGGACCAAGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR TCA 72 bp | GGCAGTGAGGAGGTGACAGAGCGGTCAGCCTTGCAGTaGGCACAGATGTCCTGGTCCGCTCACCCTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: GSEEVTERSALQ*AQMSWSAHPPL Trigger: GAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCTCTGTCACCTCCTCACTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR TCA 72 bp | CTGGTCCGCTCACCCTCCACTCCTTGGTCCCTGTCTTaGCATAGGAAGAACAGCTGCTCAGTGCAAGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LVRSPSTPWSLS*HRKNSCSVQGQ Trigger: TTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTCAAGACAGGGACCAAGGAGTGGAGGGTGAGCGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| 3UTR CCA 72 bp | GTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTaGTGCCCCAGGTCCTTTGTGTGGTGGCTTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VQGQRDPVLNAT*CPRSFVWWLQA Trigger: TGCCTGAAGCCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCGGACCGGCCGTTCACTaGCTTGGAGGATGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSGPAVH*LGGCWW Trigger: CCACCAGCATCCTCCAAGCCAGTGAACGGCCGGTCC...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCTCTGTATGCCGTGGCTaGGTCACGCTCACTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSSVCRG*VTLTLL Trigger: GAGCAGAGTGAGCGTGACTCAGCCACGGCATACAGA...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCATGTGGCCGAGAGCATaGTGGCCAGGAGGAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSMWPRA*WPGGGS Trigger: AGAACCTCCTCCTGGCCATCATGCTCTCGGCCACAT...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCACCACAGAGCCATTCTaGTCCTGGAGACAAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSTTEPF*SWRQGA Trigger: GGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGT...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCGAGTCACGCTCACTCTaGTCCGTGCTGATGAACATG | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSESRSL*SVLMNM Trigger: CATGTTCATCAGCACGGAGCAGAGTGAGCGTGACTC...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCGGCGATGATCCCTGCTaGCAGCAGGTAAGCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSGDDPC*QQVSIL Trigger: CAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCC...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTGGCTTGGAGGATGCTaGTGGGGAGCAGCCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RKNSCSVQGQRDPVLNATWLGGC*WGAAPP Trigger: CGGCGGGGCTGCTCCCCACCAGCATCCTCCAAGCCA...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCGCCAGGAGGAGGTTCTaGAACTCATTTCGGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSARRRF*NSFRKS Trigger: GGACTTCCGAAATGAGTTCCAGAACCTCCTCCTGGC...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCAAACTTGACCTGTTCTaGCTGGGAGCATCCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSKLDLF*LGASLP Trigger: AGGCAGGGATGCTCCCAGCCAGAACAGGTCAAGTTT...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCTACTGGCCAGCTCTGTaGAGTCTGTATCCGAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSYWPAL*SLYPSN Trigger: GTTGCTCGGATACAGACTCCACAGAGCTGGCCAGTA...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | GACATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCCACCAGAGGGTCAGTaGAGGCATCCCAGGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: DIGRTAAQCKGKEIPCLMPPEGQ*RHPRLG Trigger: GCCGAGCCTGGGATGCCTTCACTGACCCTCTGGTGG...CATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTAAGGGGCCATGACCCATaGCCAGCCGGAGGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLRGHDP*PAGGPE Trigger: TTCAGGGCCTCCGGCTGGTCATGGGTCATGGCCCCT...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCCAGAGGCAAACTTGGTaGAGAAGACATAGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSQRQTW*RRHRRR Trigger: TCTCCTTCTATGTCTTCTTCACCAAGTTTGCCTCTG...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACACTGGCTTGGAGGATaGTGGTGGGGAGCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLHWLGG*WWGAAP Trigger: CGGGGCTGCTCCCCACCAGCATCCTCCAAGCCAGTG...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGCGGGGCCCCTCCAACTaGATAGCAAAGCTTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QRDPVLNATWCPRSFVWWRGPSN*IAKLVA Trigger: TGCAACAAGCTTTGCTATGCAGTTGGAGGGGCCCCG...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGCTGTGCCTATCACTGTaGCCAGCACCTCCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QRDPVLNATWCPRSFVWWLCLSL*PAPPQS Trigger: TGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAG...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCACCAGCCGGAGGCCCTaGAAGAAGGGCATTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: RKNSCSVQGQRDPVLNATTSRRP*KKGIDS Trigger: TGAGTCAATGCCCTTCTTTCAGGGCCTCCGGCTGGT...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTAGGCCGTTCACTGGCTTaGAGGATGCTGGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLGRSLA*RMLVGS Trigger: GCTCCCCACCAGCATCCTCCAAGCCAGTGAACGGCC...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGAGAAGGAGAAGAATATaGGCTCGGTGCCAGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QRDPVLNATWCPRSFVWWRRRRI*ARCQGS Trigger: ACTCCCCTGGCACCGAGCCCATATTCTTCTCCTTCT...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACGTAGATGGAGGCGATaGTCCCTGCTGCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLRRWRR*SLLPAG Trigger: ACCTGCTGGCAGCAGGGATCATCGCCTCCATCTACG...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCGCGATTGGCAACTTCTaGGACCACCACAGAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: RKNSCSVQGQRDPVLNATAIGNF*DHHRAI Trigger: AATGGCTCTGTGGTGGTCTCAGAAGTTGCCAATCGC...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | GACATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTGAAAGAAGGGCATTaGCTCAGCCTGCTGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: DIGRTAAQCKGKEIPCLMLKEGH*LSLLGL Trigger: GAGTCCCAGCAGGCTGAGTCAATGCCCTTCTTTCAG...CATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCGGTAGAGACACCCAGTaGGACTCCAGAGGCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: RKNSCSVQGQRDPVLNATGRDTQ*DSRGKL Trigger: AAGTTTGCCTCTGGAGTCTCACTGGGTGTCTCTACC...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGAATGGAAGCAGGAAGTaGTTCCACCTTAGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: QRDPVLNATWCPRSFVWWNGSRK*FHLSHI Trigger: GATGTGGCTAAGGTGGAACCACTTCCTGCTTCCATT...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACGCCTAGGATCAGAATaGAGGCACAGAGGACGTAGA | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLRLGSE*RHRGRR Trigger: TCTACGTCCTCTGTGCCTTCATTCTGATCCTAGGCG...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTAGAACATGGTGAGCGCTaGGTAGGGAACATGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLEHGER*VGNMKA Trigger: TGCTTTCATGTTCCCTACTCAGCGCTCACCATGTTC...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | GACATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCATAGCAAAGCTTGTTaGAAATGGACAGTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DIGRTAAQCKGKEIPCLMHSKAC*KWTVAA Trigger: AGCAGCAACTGTCCATTTGCAACAAGCTTTGCTATG...CATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | GACATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGAGTCCAAGGTATAGGTaGAGAACAAGGCAAAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: DIGRTAAQCKGKEIPCLMSPRYR*RTRQSY Trigger: GTAACTTTGCCTTGTTCTGCACCTATACCTTGGACT...CATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR GCA 90 bp | ATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTAGATGAGAAAAGGAACTaGAGAAGAGATCCCGATGTA | + |
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Preference number: 4 (lower is better) Translates to: IGRTAAQCKGKEIPCLMLDEKRN*RRDPDV Trigger: TACATCGGGATCTCTTCTGCAGTTCCTTTTCTCATC...TAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CCA 90 bp | GACATAGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGAAAGCTTGTTGCAAATaGACAGTTGCTGCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: DIGRTAAQCKGKEIPCLMKACCK*TVAASF Trigger: AAAAGAAGCAGCAACTGTCCATTTGCAACAAGCTTT...CATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 90 bp | GTTCCTTCTTCACCTGGACCGGCCGTTCACTGGCTTGGAGGATGCTaGTGGGGAGCAGCCCCGCCGCGGAACCGCTCTCGGCGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VPSSPGPAVHWLGGC*WGAAPPRNRSRRLL Trigger: GAGAAGGCGCCGAGAGCGGTTCCGCGGCGGGGCTGCTCCCCACCAGCATCCTCCAAGCCAGTGAACGGCCGGTCCAGGTGAAGAAGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 90 bp | TTGGTTCCTTCACCTGGACCGGCCGTTCACTGGCTTGGAGGATGCTaGTGGGGAGCAGCCCCGCCGCGGAACCGCTCTCGGCGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LVPSPGPAVHWLGGC*WGAAPPRNRSRRLL Trigger: GAGAAGGCGCCGAGAGCGGTTCCGCGGCGGGGCTGCTCCCCACCAGCATCCTCCAAGCCAGTGAACGGCCGGTCCAGGTGAAGGAACCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127047.2 |
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| CDS GCA 90 bp | TTGGTTCCTTCTTCACCTGGACCGGCCGTTCACTGGCTTGGAGGATaGTGGTGGGGAGCAGCCCCGCCGCGGAACCGCTCTCGGCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LVPSSPGPAVHWLGG*WWGAAPPRNRSRRL Trigger: AAGGCGCCGAGAGCGGTTCCGCGGCGGGGCTGCTCCCCACCAGCATCCTCCAAGCCAGTGAACGGCCGGTCCAGGTGAAGAAGGAACCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 90 bp | GGGGCCATGACCCATGACCAGCCGGAGGCCCTGAAAGAAGGGCATTaGCTCAGCCTGCTGGGACTCGTAGAGTTCTCTCTGCTCCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: GAMTHDQPEALKEGH*LSLLGLVEFSLLPH Trigger: GTGCGGGAGCAGAGAGAACTCTACGAGTCCCAGCAGGCTGAGTCAATGCCCTTCTTTCAGGGCCTCCGGCTGGTCATGGGTCATGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | AGCGGTCAGCCTTGCAGTGAGCACAGATGTCCTGGTCCGCTCACCCTCCACTCCTGGAGACAAGGTGCCTaGGCTTGGCCCACAATTTGT | + |
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Preference number: 5 (lower is better) Translates to: SGQPCSEHRCPGPLTLHSWRQGA*AWPTIC Trigger: ACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCA...GGAGTGGAGGGTGAGCGGACCAGGACATCTGTGCTCACTGCAAGGCTGACCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 90 bp | CTCTGGGTGCGATTGGCAACTTCTGAGACCACCACAGAGCCATTCTaGTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LWVRLATSETTTEPF*SWRQGALAWPTICP Trigger: AGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTCTCAGAAGTTGCCAATCGCACCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 90 bp | TGGTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCTTaGATCGCTGTGCCTATCACTGTGCCCAGCACCTCCACAGTCATT | + |
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Preference number: 5 (lower is better) Translates to: WSWRQGALAWPTICP*IAVPITVPSTSTVI Trigger: AATGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 90 bp | TGGCTTGGCCCACAATTTGTCCTTGAATCGCTGTGCCTATCACTGTaGCCAGCACCTCCACAGTCATTCTGTATGCCGTGGCTGAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: WLGPQFVLESLCLSL*PAPPQSFCMPWLSH Trigger: GTGACTCAGCCACGGCATACAGAATGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 90 bp | GACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCTTGAATCGCTGTaGCTATCACTGTGCCCAGCACCTCCACAGTCATTCTGTATGCCG | + |
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Preference number: 5 (lower is better) Translates to: DKVPWLGPQFVLESL*LSLCPAPPQSFCMP Trigger: CGGCATACAGAATGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 90 bp | CCGATGTATACAGCTGTCTTCTTGCCAAACCGGGTTAGGAACCACTaGCAGATAGGGATGGTGAATGTGGCCGAGAGCATGATGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PMYTAVFLPNRVRNH*QIGMVNVAESMMAR Trigger: CCTGGCCATCATGCTCTCGGCCACATTCACCATCCCTATCTGGCAGTGGTTCCTAACCCGGTTTGGCAAGAAGACAGCTGTATACATCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 90 bp | CTGAGACCACCACAGAGCCATTCTGGTCCTGGAGACAAGGTGCCTTaGCTTGGCCCACAATTTGTCCTTGAATCGCTGTGCCTATCACTG | + |
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Preference number: 5 (lower is better) Translates to: LRPPQSHSGPGDKVP*LGPQFVLESLCLSL Trigger: CAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 90 bp | GAATCCCAGTGCGCAGCCGGTCAACTGGTACGGGGCCCCTCCAACTaGATAGCAAAGCTTGTTGCAAATGGACAGTTGCTGCTTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: ESQCAAGQLVRGPSN*IAKLVANGQLLLLF Trigger: AAAAAGAAGCAGCAACTGTCCATTTGCAACAAGCTTTGCTATGCAGTTGGAGGGGCCCCGTACCAGTTGACCGGCTGCGCACTGGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030408.12 ENSMUST00000127047.2 |
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| CDS GCA 90 bp | CAGAATGAAGGCACAGAGGACGTAGATGGAGGCGATGATCCCTGCTaGCAGCAGGTAAGCATTTTGCGTGTCTTTGAGGGAGGCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: QNEGTEDVDGGDDPC*QQVSILRVFEGGST Trigger: AGTACTGCCTCCCTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCCTCCATCTACGTCCTCTGTGCCTTCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 90 bp | AGGAGCCATGGTCACCAGCATCTTCAGTGTAAACTTGACCTGTTCTaGCTGGGAGCATCCCTGCCTCTGGTAGTTGGCAAAGTCGAGACT | + |
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Preference number: 5 (lower is better) Translates to: RSHGHQHLQCKLDLF*LGASLPLVVGKVET Trigger: AGTCTCGACTTTGCCAACTACCAGAGGCAGGGATGCTCCCAGCCAGAACAGGTCAAGTTTACACTGAAGATGCTGGTGACCATGGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCGTACTCTGGGTGCGATaGGCAACTTCTGAGACCACC | + |
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Preference number: 5 (lower is better) Translates to: RKNSCSVQGQRDPVLNATVLWVR*ATSETT Trigger: GGTGGTCTCAGAAGTTGCCAATCGCACCCAGAGTAC...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCCCTGAAAGAAGGGCATaGACTCAGCCTGCTGGGACT | + |
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Preference number: 5 (lower is better) Translates to: RKNSCSVQGQRDPVLNATPERRA*TQPAGT Trigger: AGTCCCAGCAGGCTGAGTCAATGCCCTTCTTTCAGG...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 90 bp | GAATACTGGCCAGCTCTGTGGAGTCTGTATCCGAGCAACCTGAGCTaGTGGCTTCTTCTCGTAGAGCCTGCAGAGCTTTCTTATTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: EYWPALWSLYPSNLS*WLLLVEPAELSYSV Trigger: GACAGAATAAGAAAGCTCTGCAGGCTCTACGAGAAGAAGCCAGCAGCTCAGGTTGCTCGGATACAGACTCCACAGAGCTGGCCAGTATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGATCTTCAGTGTAAACTaGACCTGTTCTGGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRDPVLNATWCPRSFVWWIFSVN*TCSGWE Trigger: CTCCCAGCCAGAACAGGTCAAGTTTACACTGAAGAT...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | CAAAGAGATCCCGTGCTTAATGCTACCTGGTGCCCCAGGTCCTTTGTGTGGTGGGTTGCTGCTTCTTTTTaGGTTCCTTCTTCACCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRDPVLNATWCPRSFVWWVAASF*VPSSPG Trigger: TCCAGGTGAAGAAGGAACCAAAAAAGAAGCAGCAAC...CCACCACACAAAGGACCTGGGGCACCAGGTAGCATTAAGCACGGGATCTCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS-3UTR CAA 90 bp | AGGAAGAACAGCTGCTCAGTGCAAGGGCAAAGAGATCCCGTGCTTAATGCTACCTATACAGCTGTCTTCTaGCCAAACCGGGTTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKNSCSVQGQRDPVLNATYTAVF*PNRVRN Trigger: GTTCCTAACCCGGTTTGGCAAGAAGACAGCTGTATA...GGTAGCATTAAGCACGGGATCTCTTTGCCCTTGCACTGAGCAGCTGTTCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 72 bp | TCACCTGGACCGGCCGTTCACTGGCTTGGAGGATGCTaGTGGGGAGCAGCCCCGCCGCGGAACCGCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGPAVHWLGGC*WGAAPPRNRSR Trigger: CCGAGAGCGGTTCCGCGGCGGGGCTGCTCCCCACCAGCATCCTCCAAGCCAGTGAACGGCCGGTCCAGGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030408.12 ENSMUST00000127047.2 |
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| CDS CAA 72 bp | CAGGGCATGAGGCGGCCCAGGCGGGTCCAGGAGGACTaGCTAATGCAGAAGCCCACCAGAGGGTCAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGMRRPRRVQED*LMQKPTRGSVK Trigger: CTTCACTGACCCTCTGGTGGGCTTCTGCATTAGCAAGTCCTCCTGGACCCGCCTGGGCCGCCTCATGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 72 bp | ACCCATGACCAGCCGGAGGCCCTGAAAGAAGGGCATTaGCTCAGCCTGCTGGGACTCGTAGAGTTCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: THDQPEALKEGH*LSLLGLVEFSL Trigger: CAGAGAGAACTCTACGAGTCCCAGCAGGCTGAGTCAATGCCCTTCTTTCAGGGCCTCCGGCTGGTCATGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | GGAGGCGATGATCCCTGCTGCCAGCAGGTAAGCATTTaGCGTGTCTTTGAGGGAGGCAGTACTCTGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GGDDPCCQQVSI*RVFEGGSTLGA Trigger: CGCACCCAGAGTACTGCCTCCCTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | GCCATTCTGGTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACAATTaGTCCTTGAATCGCTGTGCCTATCACTGTGCCCAGCACCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AILVLETRCLGLAHN*SLNRCAYHCAQHLH Trigger: GTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 72 bp | GAGGGAGGCAGTACTCTGGGTGCGATTGGCAACTTCTaGGACCACCACAGAGCCATTCTGGTCCTGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: EGGSTLGAIGNF*DHHRAILVLET Trigger: TGTCTCCAGGACCAGAATGGCTCTGTGGTGGTCTCAGAAGTTGCCAATCGCACCCAGAGTACTGCCTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | TGCGCAGCCGGTCAACTGGTACGGGGCCCCTCCAACTaGATAGCAAAGCTTGTTGCAAATGGACAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CAAGQLVRGPSN*IAKLVANGQLL Trigger: CAGCAACTGTCCATTTGCAACAAGCTTTGCTATGCAGTTGGAGGGGCCCCGTACCAGTTGACCGGCTGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030408.12 ENSMUST00000127047.2 |
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| CDS CCA 72 bp | CGATTGGCAACTTCTGAGACCACCACAGAGCCATTCTaGTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RLATSETTTEPF*SWRQGALAWPT Trigger: TGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTCTCAGAAGTTGCCAATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | CTGGTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCTaGAATCGCTGTGCCTATCACTGTGCCCAGCACCTCCACAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVLETRCLGLAHNLS*NRCAYHCAQHLHSH Trigger: ATGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | GACCACCACAGAGCCATTCTGGTCCTGGAGACAAGGTGCCTTGGCTaGGCCCACAATTTGTCCTTGAATCGCTGTGCCTATCACTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DHHRAILVLETRCLG*AHNLSLNRCAYHCA Trigger: GGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | GACGTAGATGGAGGCGATGATCCCTGCTGCCAGCAGGTAAGCATTTaGCGTGTCTTTGAGGGAGGCAGTACTCTGGGTGCGATTGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DVDGGDDPCCQQVSI*RVFEGGSTLGAIGN Trigger: GTTGCCAATCGCACCCAGAGTACTGCCTCCCTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCCTCCATCTACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 72 bp | AGACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCTTaGATCGCTGTGCCTATCACTGTGCCCAGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQGALAWPTICP*IAVPITVPSTS Trigger: GGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | GACCACCACAGAGCCATTCTGGTCCTGGAGACAAGGTaGCTTGGCTTGGCCCACAATTTGTCCTTGAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: DHHRAILVLETR*LGLAHNLSLNR Trigger: GCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | GGCACAGAGGACGTAGATGGAGGCGATGATCCCTGCTaGCAGCAGGTAAGCATTTTGCGTGTCTTTGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTEDVDGGDDPC*QQVSILRVFEG Trigger: TCCCTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCCTCCATCTACGTCCTCTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | CCAGCTCTGTGGAGTCTGTATCCGAGCAACCTGAGCTaGTGGCTTCTTCTCGTAGAGCCTGCAGAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PALWSLYPSNLS*WLLLVEPAELS Trigger: AGAAAGCTCTGCAGGCTCTACGAGAAGAAGCCAGCAGCTCAGGTTGCTCGGATACAGACTCCACAGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 72 bp | CCACAGAGCCATTCTGGTCCTGGAGACAAGGTGCCTTaGCTTGGCCCACAATTTGTCCTTGAATCGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQSHSGPGDKVP*LGPQFVLESLC Trigger: GCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | GAGACAAGGTGCCTTGGCTTGGCCCACAATTTGTCCTaGAATCGCTGTGCCTATCACTGTGCCCAGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETRCLGLAHNLS*NRCAYHCAQHL Trigger: GAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | GTCCTGGAGACAAGGTGCCTTGGCTTGGCCCACAATTaGTCCTTGAATCGCTGTGCCTATCACTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLETRCLGLAHN*SLNRCAYHCAQ Trigger: CTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 72 bp | CTCACTCTGCTCCGTGCTGATGAACATGGTGAGCGCTaGGTAGGGAACATGAAAGCACGTGACCAGTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLRADEHGER*VGNMKARDQCL Trigger: GAGACACTGGTCACGTGCTTTCATGTTCCCTACTCAGCGCTCACCATGTTCATCAGCACGGAGCAGAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS TCA 72 bp | TCCCTGCTGCCAGCAGGTAAGCATTTTGCGTGTCTTTaGGGGAGGCAGTACTCTGGGTGCGATTGGCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SLLPAGKHFACL*GRQYSGCDWQL Trigger: AAGTTGCCAATCGCACCCAGAGTACTGCCTCCCTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | CCTTGGCTTGGCCCACAATTTGTCCTTGAATCGCTGTaGCTATCACTGTGCCCAGCACCTCCACAGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PWLGPQFVLESL*LSLCPAPPQSF Trigger: GAATGACTGTGGAGGTGCTGGGCACAGTGATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | GAAGGCACAGAGGACGTAGATGGAGGCGATGATCCCTaGTGCCAGCAGGTAAGCATTTTGCGTGTCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGTEDVDGGDDP*CQQVSILRVFE Trigger: CTCAAAGACACGCAAAATGCTTACCTGCTGGCAGCAGGGATCATCGCCTCCATCTACGTCCTCTGTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS GCA 72 bp | ACAGCTGTCTTCTTGCCAAACCGGGTTAGGAACCACTaGCAGATAGGGATGGTGAATGTGGCCGAGAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TAVFLPNRVRNH*QIGMVNVAESM Trigger: CATGCTCTCGGCCACATTCACCATCCCTATCTGGCAGTGGTTCCTAACCCGGTTTGGCAAGAAGACAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 72 bp | GCAACTTCTGAGACCACCACAGAGCCATTCTGGTCCTaGAGACAAGGTGCCTTGGCTTGGCCCACAATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ATSETTTEPFWS*RQGALAWPTIC Trigger: ACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCTGTGGTGGTCTCAGAAGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | ATAGGAGCCATGGTCACCAGCATCTTCAGTGTAAACTaGACCTGTTCTGGCTGGGAGCATCCCTGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IGAMVTSIFSVN*TCSGWEHPCLW Trigger: CCAGAGGCAGGGATGCTCCCAGCCAGAACAGGTCAAGTTTACACTGAAGATGCTGGTGACCATGGCTCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CCA 72 bp | GCTCTGTGGAGTCTGTATCCGAGCAACCTGAGCTGCTaGCTTCTTCTCGTAGAGCCTGCAGAGCTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALWSLYPSNLSC*LLLVEPAELSY Trigger: ATAAGAAAGCTCTGCAGGCTCTACGAGAAGAAGCCAGCAGCTCAGGTTGCTCGGATACAGACTCCACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | AGAGCCATTCTGGTCCTGGAGACAAGGTGCCTTGGCTaGGCCCACAATTTGTCCTTGAATCGCTGTGCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RAILVLETRCLG*AHNLSLNRCAY Trigger: ATAGGCACAGCGATTCAAGGACAAATTGTGGGCCAAGCCAAGGCACCTTGTCTCCAGGACCAGAATGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 72 bp | ACTGCAGAAGAGATCCCGATGTATACAGCTGTCTTCTaGCCAAACCGGGTTAGGAACCACTGCCAGATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TAEEIPMYTAVF*PNRVRNHCQIG Trigger: CCCTATCTGGCAGTGGTTCCTAACCCGGTTTGGCAAGAAGACAGCTGTATACATCGGGATCTCTTCTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | CTGCATAGCAAAGCTTGTTGCAAATGGACAGTTGCTGCTTCTTTTTaGGTTCCTTCTTCACCTGGACCGGCCGTTCACTGGCTTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LHSKACCKWTVAASF*VPSSPGPAVHWLGG Trigger: TCCTCCAAGCCAGTGAACGGCCGGTCCAGGTGAAGAAGGAACCAAAAAAGAAGCAGCAACTGTCCATTTGCAACAAGCTTTGCTATGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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| CDS CAA 90 bp | AGAAAAGGAACTGCAGAAGAGATCCCGATGTATACAGCTGTCTTCTaGCCAAACCGGGTTAGGAACCACTGCCAGATAGGGATGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RKGTAEEIPMYTAVF*PNRVRNHCQIGMVN Trigger: ATTCACCATCCCTATCTGGCAGTGGTTCCTAACCCGGTTTGGCAAGAAGACAGCTGTATACATCGGGATCTCTTCTGCAGTTCCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030408.12 |
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