Pregenerated sensors for MFSD14B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038212Ensembl transcript IDs: ENSMUST00000054730.10, ENSMUST00000155487.8
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAGAAGTCTCCACGTGGTaGAGCTTCCTCTATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEEVSTW*SFLYGS Trigger: AGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTC...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAGTGCAGCTTCCTCTATaGCTCTCAGAGATGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEVQLPL*LSEMVS Trigger: AGACACCATCTCTGAGAGCCATAGAGGAAGCTGCAC...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAAGAAGTCTCCACGTGGTaGAGCTTCCTCTATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GNDSQKDNERRQLTLLSQEVSTW*SFLYGS Trigger: AGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTC...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAAGTGCAGCTTCCTCTATaGCTCTCAGAGATGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKVQLPL*LSEMVS Trigger: AGACACCATCTCTGAGAGCCATAGAGGAAGCTGCAC...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGAGGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGAGAGAGACAGAAGAGTaGAGGGCAGAGGTATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRGNDSQKDNERRQLTLLRETEE*RAEVWE Trigger: TTCCCATACCTCTGCCCTTCACTCTTCTGTCTCTCT...CAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCCTCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAATCTTATTCTAGTTACTaGAGGGAAAGACCGACCACC | + |
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Preference number: 2 (lower is better) Translates to: GNDSQKDNERRQLTLLSQSYSSY*RERPTT Trigger: GGTGGTCGGTCTTTCCCTTCAGTAACTAGAATAAGA...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAATTGGTTGTTTTGCCTTaGGATATGCTTAGGCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VKAGIWYRNRSRTKRHGELVVLP*DMLRLL Trigger: TAAGAGCCTAAGCATATCTCAAGGCAAAACAACCAA...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGCTCAGAGATGGTGTCTaGAGAATCTCCATTACTACT | + |
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Preference number: 2 (lower is better) Translates to: SDFLVATRKLHGWLFCLELRDGV*RISITT Trigger: AGTAGTAATGGAGATTCTGCAGACACCATCTCTGAG...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAACTCAGAGATGGTGTCTaGAGAATCTCCATTACTACT | + |
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Preference number: 2 (lower is better) Translates to: GNDSQKDNERRQLTLLSQLRDGV*RISITT Trigger: AGTAGTAATGGAGATTCTGCAGACACCATCTCTGAG...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAATATGGCTCTCAGAGATaGTGTCTGCAGAATCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: MCAFLWDSEKHTKIQISQYGSQR*CLQNLH Trigger: ATGGAGATTCTGCAGACACCATCTCTGAGAGCCATA...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAATTTTCATCTAACCTCTaGACAAATTCAGTAGATCCC | + |
|
Preference number: 2 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEFSSNL*TNSVDP Trigger: GGGATCTACTGAATTTGTCCAGAGGTTAGATGAAAA...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGAATTCAGTAGATCCCTaGTACCATGTGATTCTTATC | + |
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Preference number: 2 (lower is better) Translates to: SDFLVATRKLHGWLFCLENSVDP*YHVILI Trigger: GATAAGAATCACATGGTATCAGGGATCTACTGAATT...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAACATGGTTGGTTGTTTTaGCTTGAGATATGCTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: MCAFLWDSEKHTKIQISQHGWLF*LEICLG Trigger: GCCTAAGCATATCTCAAGGCAAAACAACCAACCATG...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR TCA 72 bp | CCAAAGGATGCTGCTAGCATCGCCCCTCCAGCACCATaGAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: PKDAASIAPPAP*SLHVVQLPLWL Trigger: GAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGGCGATGCTAGCAGCATCCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR TCA 72 bp | TGTGCAAATAAGCACAGCCAGATGGTATCCATTTCCTaGAGCTGGAGTTGCAGCAGTTGTGATCCTTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: CANKHSQMVSIS*SWSCSSCDPSN Trigger: ATTGGAAGGATCACAACTGCTGCAACTCCAGCTTCAGGAAATGGATACCATCTGGCTGTGCTTATTTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155487.8 |
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| 3UTR CCA 72 bp | AGCAGTTGTGATCCTTCCAATGTGAATGCTGGATGCTaGGAATTGAATTCTTTCCTCATCAAGAGCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSCDPSNVNAGC*ELNSFLIKSSK Trigger: CTTGCTGCTCTTGATGAGGAAAGAATTCAATTCCCAGCATCCAGCATTCACATTGGAAGGATCACAACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155487.8 |
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| 3UTR CCA 72 bp | TCTGAGTGTAGATTTGTGCAAATAAGCACAGCCAGATaGTATCCATTTCCTGAAGCTGGAGTTGCAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: SECRFVQISTAR*YPFPEAGVAAV Trigger: AACTGCTGCAACTCCAGCTTCAGGAAATGGATACCATCTGGCTGTGCTTATTTGCACAAATCTACACTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155487.8 |
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| 3UTR TCA 72 bp | AGACAGAAAAATATCTGTCACTCTTATTCTAGTTACTaGAGGGAAAGACCGACCACCTTTCCTACCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: RQKNICHSYSSY*RERPTTFPTTN Trigger: GTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAGTAACTAGAATAAGAGTGACAGATATTTTTCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAATCTCTGATTTCCTTGTaGCCACTAGAAAGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: MCAFLWDSEKHTKIQISQSLISL*PLESFM Trigger: CATGAAGCTTTCTAGTGGCAACAAGGAAATCAGAGA...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| 3UTR TCA 72 bp | TTTTCATCTAACCTCTGGACAAATTCAGTAGATCCCTaGTACCATGTGATTCTTATCAACTCATCAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: FSSNLWTNSVDP*YHVILINSSTF Trigger: AAATGTTGATGAGTTGATAAGAATCACATGGTATCAGGGATCTACTGAATTTGTCCAGAGGTTAGATGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGCAATGTCCTCATCACTaGCCCGTTCAGGGGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQQCPHH*PVQGVC Trigger: GCACACCCCCTGAACGGGGCAGTGATGAGGACATTG...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGGCAAGCTGGAGCATCTaGAAACCCAAACCAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQASWSI*KPKPRR Trigger: TCTCCTTGGTTTGGGTTTTCAGATGCTCCAGCTTGC...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGGAGGGCACTGACTGCTaGGAATGTAATGCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQEGTDC*ECNAGH Trigger: ATGTCCAGCATTACATTCCCAGCAGTCAGTGCCCTC...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGTATAGCTCAGTGCACTaGTTTCCAGGCTCTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQYSSVH*FPGSSK Trigger: CTTTGAAGAGCCTGGAAATCAGTGCACTGAGCTATA...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGAGGAAAGCTCCCAGATaGTGCTGTCTTGTAGTAATG | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQRKAPR*CCLVVM Trigger: CATTACTACAAGACAGCAGCATCTGGGAGCTTTCCT...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGTTTCATGCTCTTGAGTaGAGTCAGCTACATAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQFHALE*SQLHRQ Trigger: TTGCCTATGTAGCTGACTTCACTCAAGAGCATGAAA...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGCTGTTGTTATGTTTTTaGACTCCACTGGTTTTACGG | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQLLLCF*TPLVLR Trigger: CCGTAAAACCAGTGGAGTTCAAAAACATAACAACAG...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGTTAGGCTGCCACTGGTaGTGTTGTTATGTTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQLGCHW*CCYVFE Trigger: TTCAAAAACATAACAACAGCACCAGTGGCAGCCTAA...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAAGCTGCAAAGGTGGCTaGGACCCAGCCATAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGESCKGG*DPAISS Trigger: ACTGCTTATGGCTGGGTCTCAGCCACCTTTGCAGCT...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAATGGTGGGCCTGGGATaGAAGCTCCCTGTAAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEMVGLG*KLPVRD Trigger: ATCCCTTACAGGGAGCTTTCATCCCAGGCCCACCAT...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAACAATGTCCTCATCACTaGCCCGTTCAGGGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKQCPHH*PVQGVC Trigger: GCACACCCCCTGAACGGGGCAGTGATGAGGACATTG...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGTGTTTCCAAGAGATCTaGGCTCCCCAGGAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SDFLVATRKLHGWLFCLECFQEI*APQEAG Trigger: ACCTGCTTCCTGGGGAGCTCAGATCTCTTGGAAACA...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAGCAAGCTGGAGCATCTaGAAACCCAAACCAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEASWSI*KPKPRR Trigger: TCTCCTTGGTTTGGGTTTTCAGATGCTCCAGCTTGC...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAGATGAGGGCACTGACTaGTGGGAATGTAATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEDEGTD*WECNAG Trigger: TCCAGCATTACATTCCCAGCAGTCAGTGCCCTCATC...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAAATGGTGGGCCTGGGATaGAAGCTCCCTGTAAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: MCAFLWDSEKHTKIQISQMVGLG*KLPVRD Trigger: ATCCCTTACAGGGAGCTTTCATCCCAGGCCCACCAT...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAATGTTTCCAAGAGATCTaGGCTCCCCAGGAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: MCAFLWDSEKHTKIQISQCFQEI*APQEAG Trigger: ACCTGCTTCCTGGGGAGCTCAGATCTCTTGGAAACA...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAACTAAGGAAGACTGTCTaGGCCACAATGGACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGELRKTV*ATMDRI Trigger: AATTCTGTCCATTGTGGCTCAGACAGTCTTCCTTAG...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAAAACCCCTTGCTGATCTaGCTCTGCATTCCGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKNPLLI*LCIPRD Trigger: ATCTCTCGGAATGCAGAGTCAGATCAGCAAGGGGTT...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAAGATGAGGGCACTGACTaGTGGGAATGTAATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GNDSQKDNERRQLTLLSQDEGTD*WECNAG Trigger: TCCAGCATTACATTCCCAGCAGTCAGTGCCCTCATC...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAAAACCCCTTGCTGATCTaGCTCTGCATTCCGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: MCAFLWDSEKHTKIQISQNPLLI*LCIPRD Trigger: ATCTCTCGGAATGCAGAGTCAGATCAGCAAGGGGTT...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAGGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGGAGGGCACTGACTGCTaGGAATGTAATGCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LRGNDSQKDNERRQLTLLEGTDC*ECNAGH Trigger: ATGTCCAGCATTACATTCCCAGCAGTCAGTGCCCTC...CAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCCTCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGATGAGAGAAACACTGTaGTGCAGATCAGTAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SDFLVATRKLHGWLFCLEMRETL*CRSVRQ Trigger: CTGTCTTACTGATCTGCATCACAGTGTTTCTCTCAT...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAACTGTTGTTATGTTTTTaGACTCCACTGGTTTTACGG | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGELLLCF*TPLVLR Trigger: CCGTAAAACCAGTGGAGTTCAAAAACATAACAACAG...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAATTAGGCTGCCACTGGTaGTGTTGTTATGTTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: VKAGIWYRNRSRTKRHGELGCHW*CCYVFE Trigger: TTCAAAAACATAACAACAGCACCAGTGGCAGCCTAA...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAAAGGAAAGCTCCCAGATaGTGCTGTCTTGTAGTAATG | + |
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Preference number: 4 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKRKAPR*CCLVVM Trigger: CATTACTACAAGACAGCAGCATCTGGGAGCTTTCCT...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAAGAACTGCTATCAAAATaGAGCAGATGTCTAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKELLSK*SRCLGE Trigger: CTCTCCTAGACATCTGCTTCATTTTGATAGCAGTTC...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAAGAACTGCTATCAAAATaGAGCAGATGTCTAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GNDSQKDNERRQLTLLSQELLSK*SRCLGE Trigger: CTCTCCTAGACATCTGCTTCATTTTGATAGCAGTTC...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAAATGAGAGAAACACTGTaGTGCAGATCAGTAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GNDSQKDNERRQLTLLSQMRETL*CRSVRQ Trigger: CTGTCTTACTGATCTGCATCACAGTGTTTCTCTCAT...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CTAAGAGGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTACAGAGAAAGTGACTaGGAAGACTCCAGATACAGA | + |
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Preference number: 4 (lower is better) Translates to: LRGNDSQKDNERRQLTLLYRESD*EDSRYR Trigger: TCTGTATCTGGAGTCTTCTCAGTCACTTTCTCTGTA...CAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCCTCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAATACAGAGAAAGTGACTaGGAAGACTCCAGATACAGA | + |
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Preference number: 4 (lower is better) Translates to: MCAFLWDSEKHTKIQISQYRESD*EDSRYR Trigger: TCTGTATCTGGAGTCTTCTCAGTCACTTTCTCTGTA...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR TCA 90 bp | CTAAGAGGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTTTCATGCTCTTGAGTaGAGTCAGCTACATAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LRGNDSQKDNERRQLTLLFHALE*SQLHRQ Trigger: TTGCCTATGTAGCTGACTTCACTCAAGAGCATGAAA...CAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCCTCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAAAAAAAGCTTGAATATTaGCCAGCTTCAGGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKKKLEY*PASGRY Trigger: ATATCTTCCTGAAGCTGGGCAATATTCAAGCTTTTT...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 38% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS TCA 90 bp | ACACTTGGGTGGCCAAAACCTTGTAGCCAGCTGCCGCTCGCGGCCTaGGCGCTCCCGCGCTTCTCAGGCATGGTTGACGCCTTGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: TLGWPKPCSQLPLAA*ALPRFSGMVDALGE Trigger: CTCACCCAAGGCGTCAACCATGCCTGAGAAGCGCGGGAGCGCTCAGGCCGCGAGCGGCAGCTGGCTACAAGGTTTTGGCCACCCAAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | CCCCTCCAGCACCATGAAGTCTCCACGTGGTGCAGCTTCCTCTATGGCTCTCAGCAGCATGGTAAACACTaGGGTGGCCAAAACCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: PLQHHEVSTWCSFLYGSQQHGKH*GGQNLV Trigger: TACAAGGTTTTGGCCACCCAAGTGTTTACCATGCTG...CTGAGAGCCATAGAGGAAGCTGCACCACGTGGAGACTTCATGGTGCTGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAAGGCATGGTTGACGCCTaGGGTGAGGCCACCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEGMVDA*GEATAF Trigger: GAAGGCGGTGGCCTCACCCAAGGCGTCAACCATGCC...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAAGGCATGGTTGACGCCTaGGGTGAGGCCACCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GNDSQKDNERRQLTLLSQGMVDA*GEATAF Trigger: GAAGGCGGTGGCCTCACCCAAGGCGTCAACCATGCC...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAACGCAAAAGGGTCCGCTaGTTTCCAAGAGATCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKRKRVR*FPRDLS Trigger: GCTCAGATCTCTTGGAAACAAGCGGACCCTTTTGCG...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAACGCAAAAGGGTCCGCTaGTTTCCAAGAGATCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GNDSQKDNERRQLTLLSQRKRVR*FPRDLS Trigger: GCTCAGATCTCTTGGAAACAAGCGGACCCTTTTGCG...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGGACTGTCTCCATAGTTaGCAGAGAGGTATGTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SDFLVATRKLHGWLFCLEDCLHS*QRGMSQ Trigger: TTGGGACATACCTCTCTGCAAACTATGGAGACAGTC...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | GGGAATGATTCACAAAAAGACAATGAAAGGAGGCAGTTAACACTACTGTCCCAACAGCATGGTAAACACTaGGGTGGCCAAAACCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: GNDSQKDNERRQLTLLSQQHGKH*GGQNLV Trigger: TACAAGGTTTTGGCCACCCAAGTGTTTACCATGCTG...TTGGGACAGTAGTGTTAACTGCCTCCTTTCATTGTCTTTTTGTGAATCATTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCAGGAATATGGTACAGAAACAGAAGTAGGACAAAGAGACACGGGGAACATCAGAATTCAATTTaGGGCCCAACTCACTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: VKAGIWYRNRSRTKRHGEHQNSI*GPTHSV Trigger: AACTGAGTGAGTTGGGCCCAAAATTGAATTCTGATG...TTCCCCGTGTCTCTTTGTCCTACTTCTGTTTCTGTACCATATTCCTGCCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGGGAAAGACCGACCACCTTTCCTACCACCAACATGATTTTTCTATTAAACATCAGAATTCAATTTaGGGCCCAACTCACTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LKGKTDHLSYHQHDFSIKHQNSI*GPTHSV Trigger: AACTGAGTGAGTTGGGCCCAAAATTGAATTCTGATG...TTTAATAGAAAAATCATGTTGGTGGTAGGAAAGGTGGTCGGTCTTTCCCTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | TCTGATTTCCTTGTTGCCACTAGAAAGCTTCATGGTTGGTTGTTTTGCCTTGAGGCTGTTGTTATGTTTTaGAACTCCACTGGTTTTACG | + |
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Preference number: 5 (lower is better) Translates to: SDFLVATRKLHGWLFCLEAVVMF*NSTGFT Trigger: CGTAAAACCAGTGGAGTTCAAAAACATAACAACAGC...CTCAAGGCAAAACAACCAACCATGAAGCTTTCTAGTGGCAACAAGGAAATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS-3UTR CAA 90 bp | ATGTGCGCATTCCTATGGGATTCGGAAAAACATACCAAGATACAGATTAGTCAAGCTGTTGTTATGTTTTaGAACTCCACTGGTTTTACG | + |
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Preference number: 5 (lower is better) Translates to: MCAFLWDSEKHTKIQISQAVVMF*NSTGFT Trigger: CGTAAAACCAGTGGAGTTCAAAAACATAACAACAGC...TTGACTAATCTGTATCTTGGTATGTTTTTCCGAATCCCATAGGAATGCGCACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS CCA 72 bp | CGCTCGCGGCCTGAGCGCTCCCGCGCTTCTCAGGCATaGTTGACGCCTTGGGTGAGGCCACCGCCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: RSRPERSRASQA*LTPWVRPPPST Trigger: GGTGGAAGGCGGTGGCCTCACCCAAGGCGTCAACCATGCCTGAGAAGCGCGGGAGCGCTCAGGCCGCGAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS CCA 72 bp | GAGCGCTCCCGCGCTTCTCAGGCATGGTTGACGCCTTaGGTGAGGCCACCGCCTTCCACCTCGGCTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ERSRASQAWLTP*VRPPPSTSAPP Trigger: CGGAGGAGCCGAGGTGGAAGGCGGTGGCCTCACCCAAGGCGTCAACCATGCCTGAGAAGCGCGGGAGCGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS CAA 72 bp | TCGCGGCCTGAGCGCTCCCGCGCTTCTCAGGCATGGTaGACGCCTTGGGTGAGGCCACCGCCTTCCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: SRPERSRASQAW*TPWVRPPPSTS Trigger: CGAGGTGGAAGGCGGTGGCCTCACCCAAGGCGTCAACCATGCCTGAGAAGCGCGGGAGCGCTCAGGCCGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS TCA 72 bp | TGGCCAAAACCTTGTAGCCAGCTGCCGCTCGCGGCCTaGGCGCTCCCGCGCTTCTCAGGCATGGTTGACGCC | + |
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Preference number: 6 (lower is better) Translates to: WPKPCSQLPLAA*ALPRFSGMVDA Trigger: GGCGTCAACCATGCCTGAGAAGCGCGGGAGCGCTCAGGCCGCGAGCGGCAGCTGGCTACAAGGTTTTGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS GCA 72 bp | GGTAAACACTTGGGTGGCCAAAACCTTGTAGCCAGCTaGCGCTCGCGGCCTGAGCGCTCCCGCGCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKHLGGQNLVAS*RSRPERSRASQ Trigger: CTGAGAAGCGCGGGAGCGCTCAGGCCGCGAGCGGCAGCTGGCTACAAGGTTTTGGCCACCCAAGTGTTTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS TCA 72 bp | TTTTCTCCGATAGAGATTCCGGAACTGCTATCAAAATaGAGCAGATGTCTAGGAGAGCCACCAGTGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FSPIEIPELLSK*SRCLGEPPVWL Trigger: TAGCCACACTGGTGGCTCTCCTAGACATCTGCTTCATTTTGATAGCAGTTCCGGAATCTCTATCGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS TCA 72 bp | GTGCTTAGGCTGCCACTGGTGCTGTTGTTATGTTTTTaGACTCCACTGGTTTTACGGTATTCAGGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: VLRLPLVLLLCF*TPLVLRYSGMN Trigger: ATTCATCCCTGAATACCGTAAAACCAGTGGAGTTCAAAAACATAACAACAGCACCAGTGGCAGCCTAAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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| CDS TCA 72 bp | CTATACATGCTCCAAATAAAAATGGTGGGCCTGGGATaGAAGCTCCCTGTAAGGGATCATCATCAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: LYMLQIKMVGLG*KLPVRDHHQNS Trigger: TGAATTCTGATGATGATCCCTTACAGGGAGCTTTCATCCCAGGCCCACCATTTTTATTTGGAGCATGTATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054730.10 ENSMUST00000155487.8 |
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