Pregenerated sensors for MFSD14A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089911Ensembl transcript IDs: ENSMUST00000029570.9
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATCTAAGACCTGGGTGCTaGGAGAGAGAGAAGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHLRPGC*EREKSS Trigger: GGAAGACTTCTCTCTCTCGCAGCACCCAGGTCTTAG...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACATCCAGAGCTACAGGTaGAAACTAAGACCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHIQSYR*KLRPGC Trigger: GCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGAT...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATGTGAAAACTAAGACCTaGGTGCTGCGAGAGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHVKTKT*VLRERE Trigger: TTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCAC...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATAAAGTACACTGCAGATaGAAATGGAATGTACATCCA | + |
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Preference number: 2 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHKVHCR*KWNVHP Trigger: TGGATGTACATTCCATTTCCATCTGCAGTGTACTTT...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| 3UTR CCA 72 bp | TGGCTAGGCTCTGACCACCCCAATTTGAATTCTAAGTaGCTGATCTTTTCATTCTTCAGAACAGCCGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: WLGSDHPNLNSK*LIFSFFRTAVN Trigger: ATTCACGGCTGTTCTGAAGAATGAAAAGATCAGCCACTTAGAATTCAAATTGGGGTGGTCAGAGCCTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCAGCTCCCCACGATGCTaGCCGCATCTTCTCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVSSPRC*PHLLRQ Trigger: TTGCCTGAGAAGATGCGGCCAGCATCGTGGGGAGCT...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCCAGAATGCCAAGGACTaGTATGAAGGCTGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVQNAKD*YEGCHT Trigger: AGTGTGGCAGCCTTCATAGCAGTCCTTGGCATTCTG...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCAAGGGCGCTAACAGCTaGAAAGGTGATGCTAGACAT | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVKGANS*KGDARH Trigger: ATGTCTAGCATCACCTTTCCAGCTGTTAGCGCCCTT...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCCACACATTCGTGTCCTaGAGTAAAGGTTCTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVHTFVS*SKGSLA Trigger: GGCCAAAGAACCTTTACTCCAGGACACGAATGTGTG...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATGATGCTAGACATGGCTaGCACTGCCCCAGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHDARHG*HCPSSP Trigger: TGGGCTGCTGGGGCAGTGGCAGCCATGTCTAGCATC...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCGGAATATGTAGAAAATaGACCCATAAAGGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVGICRK*THKGLV Trigger: GACCAGCCCTTTATGGGTTCATTTTCTACATATTCC...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCCAAGACTATGGTCTGTaGAATAATGGACAGAATGCC | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVQDYGL*NNGQNA Trigger: GGCATTCTGTCCATTATTGCACAGACCATAGTCTTG...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCACCAAAGCCGTACCATaGCAGCTGCAATATTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVTKAVP*QLQYLK Trigger: TTTCAAATATTGCAGCTGGCATGGTACGGCTTTGGT...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCAGTGCTTCCTCCAACTaGTGGACCTTAAACTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVSASSN*WTLNLN Trigger: ATTTAAGTTTAAGGTCCAGCAGTTGGAGGAAGCACT...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATGAGGATGGCTGTGACTaGCACAGTGCTTCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHEDGCD*HSASSN Trigger: GTTGGAGGAAGCACTGTGGCAGTCACAGCCATCCTC...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCCTCCTTTCATGCTCTTaGGTTATATCTGCTACATAT | + |
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Preference number: 4 (lower is better) Translates to: HPELQVKTKTWVLREREVLLSCS*VISATY Trigger: ATATGTAGCAGATATAACTCAAGAGCATGAAAGGAG...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATTGCCAAGGACTGCTATaGAGGCTGCCACACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHCQGLL*RLPHFL Trigger: CAGAAAGTGTGGCAGCCTTCATAGCAGTCCTTGGCA...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATGGAGTAAAGGTTCTTTaGCCTCTCCTGGCGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHGVKVL*PLLALV Trigger: CACAAGCGCCAGGAGAGGCCAAAGAACCTTTACTCC...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACTTCTTTGGCCTCTCCTaGCGCTTGTGTACTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHFFGLS*RLCTVR Trigger: CCTCACAGTACACAAGCGCCAGGAGAGGCCAAAGAA...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACCATCTTCTCAGGCAATaGCTCTGGCACAGCAACAAG | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHHLLRQ*LWHSNK Trigger: CTTGTTGCTGTGCCAGAGTCATTGCCTGAGAAGATG...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACATGACAATAACCGCATaGTACACACTAGGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHMTITA*YTLGEP Trigger: AGGCTCCCCTAGTGTGTATCATGCGGTTATTGTCAT...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACAGGAGAGAAACACCGTaGTACAGATCAGCAGCACTA | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHRRETP*YRSAAL Trigger: TAGTGCTGCTGATCTGTATCACGGTGTTTCTCTCCT...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGCCAGCTGCAATATTTaGAATCCCAGACCCAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHASCNI*NPRPSK Trigger: CTTACTGGGTCTGGGATTTCAAATATTGCAGCTGGC...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATCATTGCACAATCCTCTaGTCCCTGTTATCATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHHCTIL*SLLSSL Trigger: AAGGGATGATAACAGGGATCAGAGGATTGTGCAATG...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGACTGCTATGAAGGCTaGCACACTTTCTGGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHDCYEG*HTFWGK Trigger: TTTTCCCCAGAAAGTGTGGCAGCCTTCATAGCAGTC...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATAGATCAGCAGCACTATaGAGTCTTGGCCCACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHRSAAL*SLGPLF Trigger: AAAAAGTGGGCCAAGACTCCATAGTGCTGCTGATCT...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGTCTGTCCCTGTGATTaGCAGTTCTTTAAGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHVCPCD*QFFKFH Trigger: GTGGAACTTAAAGAACTGCCAATCACAGGGACAGAC...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATAAACCCTTTACTCCTTaGATTAGGCCATTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHKPFTP*IRPFIR Trigger: TCTGATGAATGGCCTAATTCAAGGAGTAAAGGGTTT...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACCACAGAGAAGGTTACTaGAAAAACCCCAGAAACAGA | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHHREGY*KNPRNR Trigger: TCTGTTTCTGGGGTTTTTGCAGTAACCTTCTCTGTG...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CCA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATCCAGACCCAGTAAGATaGTGTTCTTATTTCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHPDPVR*CSYFQL Trigger: CAATTGGAAATAAGAACACCATCTTACTGGGTCTGG...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACTTCCAATTGACCTCATaGGTAAACTCAAGACTATGG | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHFQLTS*VNSRLW Trigger: CCATAGTCTTGAGTTTACTCATGAGGTCAATTGGAA...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACATTTCATTATCTGTCTaGGGTATAAGAAGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHISLSV*GIRRSW Trigger: CCAGCTTCTTCTTATACCTCAGACAGATAATGAAAT...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACTATATCTGCTACATATaGAAATACCACAGAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHYICYI*KYHREG Trigger: ACCTTCTCTGTGGTATTTGCATATGTAGCAGATATA...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCGGCCTCTCCTGGCGCTaGTGTACTGTGAGGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: HPELQVKTKTWVLREREVGLSWR*CTVRMA Trigger: AGCCATCCTCACAGTACACAAGCGCCAGGAGAGGCC...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCTGGAGTAAAGGTTCTTaGGCCTCTCCTGGCGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: HPELQVKTKTWVLREREVWSKGS*ASPGAC Trigger: ACAAGCGCCAGGAGAGGCCAAAGAACCTTTACTCCA...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | CATCCAGAGCTACAGGTGAAAACTAAGACCTGGGTGCTGCGAGAGAGAGAAGTCTTAATGATGATCTTTTaGGCCAGCATGATACTGCGG | + |
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Preference number: 5 (lower is better) Translates to: HPELQVKTKTWVLREREVLMMIF*ASMILR Trigger: CCGCAGTATCATGCTGGCCAAAAAGATCATCATTAA...GACTTCTCTCTCTCGCAGCACCCAGGTCTTAGTTTTCACCTGTAGCTCTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGCTGAGGGCTTGTGTTaGTCCCCAGGTCTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHAEGLC*SPGLSL Trigger: CAGGGACAGACCTGGGGACAAACACAAGCCCTCAGC...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | TGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACGGAGTTCATGCTGGTCCCAGACCATaGCACAATCCTCTGATCCCT | + |
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Preference number: 5 (lower is better) Translates to: CNIFGKLSGSFFSSHGVHAGPRP*HNPLIP Trigger: AGGGATCAGAGGATTGTGCAATGGTCTGGGACCAGC...ATGAACTCCGTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS GCA 90 bp | ACTCAAGACTATGGTCTGTGCAATAATGGACAGAATGCCAAGGACTaGTATGAAGGCTGCCACACTTTCTGGGGAAAATTTCATTATCTG | + |
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Preference number: 5 (lower is better) Translates to: TQDYGLCNNGQNAKD*YEGCHTFWGKFHYL Trigger: CAGATAATGAAATTTTCCCCAGAAAGTGTGGCAGCCTTCATAGCAGTCCTTGGCATTCTGTCCATTATTGCACAGACCATAGTCTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGTGTAACATCTTTGGAAAACTGTCCGGTTCTTTCTTTAGTTCCCACCCCTGTTATCATCCCTaGAACAACACCCTGTTGATC | + |
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Preference number: 5 (lower is better) Translates to: ERKCNIFGKLSGSFFSSHPCYHP*NNTLLI Trigger: GATCAACAGGGTGTTGTTCAAGGGATGATAACAGGG...GTGGGAACTAAAGAAAGAACCGGACAGTTTTCCAAAGATGTTACACTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS GCA 90 bp | TTGAGTTATATCTGCTACATATGCAAATACCACAGAGAAGGTTACTaGAAAAACCCCAGAAACAGAGATAACAGCAAAGTACCACCACGG | + |
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Preference number: 5 (lower is better) Translates to: LSYICYICKYHREGY*KNPRNRDNSKVPPR Trigger: CCGTGGTGGTACTTTGCTGTTATCTCTGTTTCTGGGGTTTTTGCAGTAACCTTCTCTGTGGTATTTGCATATGTAGCAGATATAACTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS TCA 72 bp | ACTGGCCGGCTTCAGGTAGGTAGGAGAGAAACACCGTaGTACAGATCAGCAGCACTATGGAGTCTTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TGRLQVGRRETP*YRSAALWSLGP Trigger: TGGGCCAAGACTCCATAGTGCTGCTGATCTGTATCACGGTGTTTCTCTCCTACCTACCTGAAGCCGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS CCA 72 bp | TTAAAGATGCAAAGGGGTCAGCCTGTTCCCATGAAATaGGAGCTCCCCACGATGCTGGCCGCATCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LKMQRGQPVPMK*ELPTMLAASSQ Trigger: CTGAGAAGATGCGGCCAGCATCGTGGGGAGCTCCCATTTCATGGGAACAGGCTGACCCCTTTGCATCTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS TCA 72 bp | CTGCCACACTTTCTGGGGAAAATTTCATTATCTGTCTaGGGTATAAGAAGAAGCTGGAGTACTGGCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPHFLGKISLSV*GIRRSWSTGRL Trigger: AAGCCGGCCAGTACTCCAGCTTCTTCTTATACCTCAGACAGATAATGAAATTTTCCCCAGAAAGTGTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS CAA 72 bp | AATAACCGCATGATACACACTAGGGGAGCCTATTCCTaGAGGCGTGCCTCCGTCCTTAATGATGATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: NNRMIHTRGAYS*RRASVLNDDLF Trigger: AAAAAGATCATCATTAAGGACGGAGGCACGCCTCAAGGAATAGGCTCCCCTAGTGTGTATCATGCGGTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS TCA 72 bp | TCGGAACCAAAGCCGTACCATGCCAGCTGCAATATTTaGAATCCCAGACCCAGTAAGATGGTGTTCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: SEPKPYHASCNI*NPRPSKMVFLF Trigger: AAATAAGAACACCATCTTACTGGGTCTGGGATTTCAAATATTGCAGCTGGCATGGTACGGCTTTGGTTCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS GCA 72 bp | TATGGTCTGTGCAATAATGGACAGAATGCCAAGGACTaGTATGAAGGCTGCCACACTTTCTGGGGAAAATTT | + |
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Preference number: 6 (lower is better) Translates to: YGLCNNGQNAKD*YEGCHTFWGKF Trigger: AAATTTTCCCCAGAAAGTGTGGCAGCCTTCATAGCAGTCCTTGGCATTCTGTCCATTATTGCACAGACCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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| CDS CAA 90 bp | GAACGTAGCAGAAACCAGTCCGTAAGCCATACTCCTTTCATGCTCTaGAGTTATATCTGCTACATATGCAAATACCACAGAGAAGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: ERSRNQSVSHTPFML*SYICYICKYHREGY Trigger: GTAACCTTCTCTGTGGTATTTGCATATGTAGCAGATATAACTCAAGAGCATGAAAGGAGTATGGCTTACGGACTGGTTTCTGCTACGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029570.9 |
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