Pregenerated sensors for MFSD13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030877Ensembl transcript IDs: ENSMUST00000033166.10, ENSMUST00000133939.2, ENSMUST00000149535.2, ENSMUST00000216241.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGCCTGGGGGAAGTCTCTaGAAACAGGCGCCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRPGGSL*KQAPLG Trigger: GCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGG...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTGGTCAGCTGCAGCCTaGTCTCCTGCCTGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRWSAAA*SPAWGK Trigger: CTTCCCCCAGGCAGGAGAGCAGGCTGCAGCTGACCA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTGCAGCCTGCTCTCCTaGCTGGGGGAAGTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRCSLLS*LGEVSA Trigger: TGCAGAGACTTCCCCCAGGCAGGAGAGCAGGCTGCA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATGGTCAGCTGCAGCCTaGTCTCCTGCCTGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTWSAAA*SPAWGK Trigger: CTTCCCCCAGGCAGGAGAGCAGGCTGCAGCTGACCA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGAAGAAGGCCACTGCGTaGAGAAGGGCTCCAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRKKATA*RRAPSR Trigger: CCTGCTTGGAGCCCTTCTGCACGCAGTGGCCTTCTT...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGAGCAAGAAGGCCACTaGGTGCAGAAGGGCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWREQEGH*VQKGSK Trigger: CTTGGAGCCCTTCTGCACGCAGTGGCCTTCTTGCTC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATGCAGCCTGCTCTCCTaGCTGGGGGAAGTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTCSLLS*LGEVSA Trigger: TGCAGAGACTTCCCCCAGGCAGGAGAGCAGGCTGCA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTCTGCACTGTCGCGATaGCCAGGGAGACCACACAGA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRSALSR*PGRPHR Trigger: TCTGTGTGGTCTCCCTGGGCATCGCGACAGTGCAGA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGCCTGCTCTCCTGCCTaGGGGAAGTCTCTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRACSPA*GKSLQT Trigger: TGTTTGCAGAGACTTCCCCCAGGCAGGAGAGCAGGC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAAAGAAGGCCACTGCGTaGAGAAGGGCTCCAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTKKATA*RRAPSR Trigger: CCTGCTTGGAGCCCTTCTGCACGCAGTGGCCTTCTT...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGTGGGTGCTGTCAAATaGGCACAGGGAGGCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTVGAVK*AQGGYQ Trigger: CTGGTAGCCTCCCTGTGCGCATTTGACAGCACCCAC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATCTGCACTGTCGCGATaGCCAGGGAGACCACACAGA | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTSALSR*PGRPHR Trigger: TCTGTGTGGTCTCCCTGGGCATCGCGACAGTGCAGA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGCCTGCTCTCCTGCCTaGGGGAAGTCTCTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTACSPA*GKSLQT Trigger: TGTTTGCAGAGACTTCCCCCAGGCAGGAGAGCAGGC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAAGAAGTACCAGGCACTaGGGGCAGATGAAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTRSTRH*GQMKPA Trigger: AGCAGGCTTCATCTGCCCTCAGTGCCTGGTACTTCT...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGAGTCTCTTCTGTTCCTaGCGGAGAAGGAGCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRSLFCS*RRRSSK Trigger: CTTGGAGCTCCTTCTCCGTCAGGAACAGAAGAGACT...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGCTCCAAGTCAAAATCTaGACTGTCGCGATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRLQVKI*TVAMPR Trigger: CCTGGGCATCGCGACAGTGCAGATTTTGACTTGGAG...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAAGTCTCTTCTGTTCCTaGCGGAGAAGGAGCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTSLFCS*RRRSSK Trigger: CTTGGAGCTCCTTCTCCGTCAGGAACAGAAGAGACT...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATTAATTCTGGTCAGCTaGAGCCTGCTCTCCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTLILVS*SLLSCL Trigger: CAGGCAGGAGAGCAGGCTGCAGCTGACCAGAATTAA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGGAGCCCACCAGGGATaGCACTTGGTTAATTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTGAHQG*HLVNSG Trigger: ACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACACTCCAAGTCAAAATCTaGACTGTCGCGATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTLQVKI*TVAMPR Trigger: CCTGGGCATCGCGACAGTGCAGATTTTGACTTGGAG...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACACCATGTTGTGAGAGATaGGGCCACAGAAAAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTPCCER*GHRKGC Trigger: GCATCCTTTTCTGTGGCCTCATCTCTCACAACATGG...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGTAAAAGCTGAGAGATaGCAGGAAGGCAATGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTVKAER*QEGNGD Trigger: GTCGCCATTGCCTTCCTGGCATCTCTCAGCTTTTAC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGCCTCTCCATGCTCATaGTGGTTTAGCTTAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRASPCS*WFSLDS Trigger: ACTGTCTAAGCTAAACCAGCATGAGCATGGAGAGGC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGAGGATTTCCATGTTGTaGGAGATGAGGCCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRRISML*EMRPQK Trigger: TTTCTGTGGCCTCATCTCTCACAACATGGAAATCCT...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGCCTCTCCATGCTCATaGTGGTTTAGCTTAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTASPCS*WFSLDS Trigger: ACTGTCTAAGCTAAACCAGCATGAGCATGGAGAGGC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTTGTTCGCCTCTCCATaGTCATGCTGGTTTAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRLFASP*SCWFSL Trigger: TAAGCTAAACCAGCATGAGCATGGAGAGGCGAACAA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAAGGATTTCCATGTTGTaGGAGATGAGGCCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTRISML*EMRPQK Trigger: TTTCTGTGGCCTCATCTCTCACAACATGGAAATCCT...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR GCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATTGTTCGCCTCTCCATaGTCATGCTGGTTTAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTLFASP*SCWFSL Trigger: TAAGCTAAACCAGCATGAGCATGGAGAGGCGAACAA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACGTGGCTTGAAAATTaGGCAGGATTTCCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRTWLEN*AGFPCC Trigger: ACAACATGGAAATCCTGCCCAATTTTCAAGCCACGT...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTCTCCATGCTCATGCTaGTTTAGCTTAGACAGTATC | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRSPCSC*FSLDSI Trigger: GATACTGTCTAAGCTAAACCAGCATGAGCATGGAGA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACACAAACTGTCTCACATTaGACATGCCACTGTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTQTVSH*TCHCKS Trigger: GCTTTTACAGTGGCATGTTCAATGTGAGACAGTTTG...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAACGTGGCTTGAAAATTaGGCAGGATTTCCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTTWLEN*AGFPCC Trigger: ACAACATGGAAATCCTGCCCAATTTTCAAGCCACGT...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGTCAAATGGAAGACCTaGAAGAAATTCATGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRVKWKT*KKFMMR Trigger: CCTCATCATGAATTTCTTCCAGGTCTTCCATTTGAC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATCTCCATGCTCATGCTaGTTTAGCTTAGACAGTATC | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTSPCSC*FSLDSI Trigger: GATACTGTCTAAGCTAAACCAGCATGAGCATGGAGA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGTTAAACATGCTGTCCTaGAGATCTAAAAGTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWRLNMLS*RSKSLL Trigger: CAACAGACTTTTAGATCTTCAGGACAGCATGTTTAA...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGAGGACGTTTTCCTCTaGGTTTCTTTTAAACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EGIKNVSESALEHSITWREDVFL*VSFKLK Trigger: TTTGAGTTTAAAAGAAACCCAGAGGAAAACGTCCTC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGTCAAATGGAAGACCTaGAAGAAATTCATGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTVKWKT*KKFMMR Trigger: CCTCATCATGAATTTCTTCCAGGTCTTCCATTTGAC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATTAAACATGCTGTCCTaGAGATCTAAAAGTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTLNMLS*RSKSLL Trigger: CAACAGACTTTTAGATCTTCAGGACAGCATGTTTAA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 |
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| CDS-3UTR TCA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACATTAAACATGCTGTCCTaGAGATCTAAAAGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GIKNVSESALEHSITWRTLNMLS*RSKSLL Trigger: CAGAAGACTTTTAGATCTTCAGGACAGCATGTTTAA...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216241.2 |
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| CDS GCA 90 bp | TCCTGCCTGGGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTTGCTaGACCCAGGCGTGGGTGCTGTCAAATGCGCACAGGGAGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: SCLGEVSANRRHWAC*TQAWVLSNAHREAT Trigger: GGTAGCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS GCA 90 bp | CTCTCCTGCCTGGGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTTaGTGCACCCAGGCGTGGGTGCTGTCAAATGCGCACAGGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LSCLGEVSANRRHWA*CTQAWVLSNAHREA Trigger: AGCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGGCAGGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS GCA 90 bp | AATTCTGGTCAGCTGCAGCCTGCTCTCCTGCCTGGGGGAAGTCTCTaGAAACAGGCGCCACTGGGCTTGCTGCACCCAGGCGTGGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: NSGQLQPALLPGGSL*KQAPLGLLHPGVGA Trigger: AGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGGCAGGAGAGCAGGCTGCAGCTGACCAGAATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS GCA 90 bp | CAGGCGCCACTGGGCTTGCTGCACCCAGGCGTGGGTGCTGTCAAATaGGCACAGGGAGGCTACCAGCTGGAGTCCAATAAGCCAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: QAPLGLLHPGVGAVK*AQGGYQLESNKPVT Trigger: AGTGACTGGCTTATTGGACTCCAGCTGGTAGCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CCA 90 bp | GAAGTCTCTGCAAACAGGCGCCACTGGGCTTGCTGCACCCAGGCGTaGGTGCTGTCAAATGCGCACAGGGAGGCTACCAGCTGGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: EVSANRRHWACCTQA*VLSNAHREATSWSP Trigger: TGGACTCCAGCTGGTAGCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CCA 90 bp | AGGCCACAGAAAAGGATGCTGACGGAGCCCACCAGGGATGCCACTTaGTTAATTCTGGTCAGCTGCAGCCTGCTCTCCTGCCTGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RPQKRMLTEPTRDAT*LILVSCSLLSCLGE Trigger: TTCCCCCAGGCAGGAGAGCAGGCTGCAGCTGACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCCGTCAGCATCCTTTTCTGTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS GCA 90 bp | AGAGATGAGGCCACAGAAAAGGATGCTGACGGAGCCCACCAGGGATaGCACTTGGTTAATTCTGGTCAGCTGCAGCCTGCTCTCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RDEATEKDADGAHQG*HLVNSGQLQPALLP Trigger: AGGCAGGAGAGCAGGCTGCAGCTGACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCCGTCAGCATCCTTTTCTGTGGCCTCATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS TCA 90 bp | AGGCCACTGCGTGCAGAAGGGCTCCAAGCAGGGAGCAACGGTAACTaGGACAGCAGTCATACTGAGAGCTCATGTGGAAATACCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: RPLRAEGLQAGSNGN*DSSHTESSCGNTHS Trigger: TGAGTGGGTATTTCCACATGAGCTCTCAGTATGACTGCTGTCTCAGTTACCGTTGCTCCCTGCTTGGAGCCCTTCTGCACGCAGTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS GCA 90 bp | TTCTCTATAGTGTTTCCAAGGGAACCAAGGGAGCAAGAAGGCCACTaGGTGCAGAAGGGCTCCAAGCAGGGAGCAACGGTAACTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: FSIVFPREPREQEGH*VQKGSKQGATVTET Trigger: TGTCTCAGTTACCGTTGCTCCCTGCTTGGAGCCCTTCTGCACGCAGTGGCCTTCTTGCTCCCTTGGTTCCCTTGGAAACACTATAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGGGCGACAGACGTGGCTaGAAAATTGGGCAGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: EGIKNVSESALEHSITWRGDRRG*KIGQDF Trigger: GAAATCCTGCCCAATTTTCAAGCCACGTCTGTCGCC...CCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS-3UTR CAA 90 bp | GGTATAAAGAATGTTTCTGAGAGCGCCCTTGAGCACAGCATAACCTGGAGGACAGGCGACAGACGTGGCTaGAAAATTGGGCAGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: GIKNVSESALEHSITWRTGDRRG*KIGQDF Trigger: GAAATCCTGCCCAATTTTCAAGCCACGTCTGTCGCC...TGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGAAACATTCTTTATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS CCA 90 bp | GGTCCTTGCCAACTCCTGTTCGCTCTCGGAGAGGACGTTTTCCTCTaGGTTTCTTTTAAACTCAAACTGTCTCACATTGAACATGCCACT | + |
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Preference number: 5 (lower is better) Translates to: GPCQLLFALGEDVFL*VSFKLKLSHIEHAT Trigger: AGTGGCATGTTCAATGTGAGACAGTTTGAGTTTAAAAGAAACCCAGAGGAAAACGTCCTCTCCGAGAGCGAACAGGAGTTGGCAAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS CCA 90 bp | CTCAGGTCAGTCAGGATATTCCATATCATTAAAATTACCTGGGCCTaGCAGAAGGCCGACTTGGAAATCTTGTATACCTCCAAGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LRSVRIFHIIKITWA*QKADLEILYTSKKS Trigger: ACTTTTCTTGGAGGTATACAAGATTTCCAAGTCGGCCTTCTGCCAGGCCCAGGTAATTTTAATGATATGGAATATCCTGACTGACCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CCA 90 bp | TATTCCATATCATTAAAATTACCTGGGCCTGGCAGAAGGCCGACTTaGAAATCTTGTATACCTCCAAGAAAAGTTTCACATAGTAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: YSISLKLPGPGRRPT*KSCIPPRKVSHSRN Trigger: GTTTCTACTATGTGAAACTTTTCTTGGAGGTATACAAGATTTCCAAGTCGGCCTTCTGCCAGGCCCAGGTAATTTTAATGATATGGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CAA 90 bp | GCTCTCCTGCCTGGGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTaGCTGCACCCAGGCGTGGGTGCTGTCAAATGCGCACAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ALLPGGSLCKQAPLG*LHPGVGAVKCAQGG Trigger: GCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGGCAGGAGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS CCA 72 bp | GCAAACAGGCGCCACTGGGCTTGCTGCACCCAGGCGTaGGTGCTGTCAAATGCGCACAGGGAGGCTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ANRRHWACCTQA*VLSNAHREATS Trigger: GCTGGTAGCCTCCCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | GGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTTGCTaGACCCAGGCGTGGGTGCTGTCAAATGCGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: GEVSANRRHWAC*TQAWVLSNAHR Trigger: CCTGTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | CTGGGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTTaGTGCACCCAGGCGTGGGTGCTGTCAAATGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: LGEVSANRRHWA*CTQAWVLSNAH Trigger: GTGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CAA 72 bp | CCTGGGGGAAGTCTCTGCAAACAGGCGCCACTGGGCTaGCTGCACCCAGGCGTGGGTGCTGTCAAATGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PGGSLCKQAPLG*LHPGVGAVKCA Trigger: TGCGCATTTGACAGCACCCACGCCTGGGTGCAGCAAGCCCAGTGGCGCCTGTTTGCAGAGACTTCCCCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CAA 90 bp | GAGGCCACAGAAAAGGATGCTGACGGAGCCCACCAGGGATGCCACTaGGTTAATTCTGGTCAGCTGCAGCCTGCTCTCCTGCCTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: EATEKDADGAHQGCH*VNSGQLQPALLPGG Trigger: TCCCCCAGGCAGGAGAGCAGGCTGCAGCTGACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCCGTCAGCATCCTTTTCTGTGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | GTGTTTCCAAGGGAACCAAGGGAGCAAGAAGGCCACTaGGTGCAGAAGGGCTCCAAGCAGGGAGCAACGGTA | + |
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Preference number: 6 (lower is better) Translates to: VFPREPREQEGH*VQKGSKQGATV Trigger: TACCGTTGCTCCCTGCTTGGAGCCCTTCTGCACGCAGTGGCCTTCTTGCTCCCTTGGTTCCCTTGGAAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CCA 72 bp | AAAAGGATGCTGACGGAGCCCACCAGGGATGCCACTTaGTTAATTCTGGTCAGCTGCAGCCTGCTCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KRMLTEPTRDAT*LILVSCSLLSC Trigger: GCAGGAGAGCAGGCTGCAGCTGACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCCGTCAGCATCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS CAA 72 bp | GAAAAGGATGCTGACGGAGCCCACCAGGGATGCCACTaGGTTAATTCTGGTCAGCTGCAGCCTGCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EKDADGAHQGCH*VNSGQLQPALL Trigger: CAGGAGAGCAGGCTGCAGCTGACCAGAATTAACCAAGTGGCATCCCTGGTGGGCTCCGTCAGCATCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS TCA 72 bp | AGTTCCTCTGAGACAAGATTTGTCTCATCAGTAAGATaGCGGAGGTCCTTGCCAACTCCTGTTCGCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSETRFVSSVR*RRSLPTPVRSR Trigger: CCGAGAGCGAACAGGAGTTGGCAAGGACCTCCGTCATCTTACTGATGAGACAAATCTTGTCTCAGAGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | TCTCACATTGAACATGCCACTGTAAAAGCTGAGAGATaGCAGGAAGGCAATGGCGACAGACGTGGCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SHIEHATVKAER*QEGNGDRRGLK Trigger: TTTCAAGCCACGTCTGTCGCCATTGCCTTCCTGGCATCTCTCAGCTTTTACAGTGGCATGTTCAATGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS TCA 72 bp | CCAAACAGTAATAGTGTTCCTGTCCCAGAAGTAACATaGCAAGGGCGGCTGCCCCTTCTAGGTAGAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PNSNSVPVPEVT*QGRLPLLGRKK Trigger: TTTCTTTCTACCTAGAAGGGGCAGCCGCCCTTGTCATGTTACTTCTGGGACAGGAACACTATTACTGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | GCACTGATGACAGCAACCATCAAGGAAAAAGGAGGCTaGCTGTTAAACTTCGGTAAATCTGCTTCAACCATG | + |
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Preference number: 6 (lower is better) Translates to: ALMTATIKEKGG*LLNFGKSASTM Trigger: CATGGTTGAAGCAGATTTACCGAAGTTTAACAGGCAGCCTCCTTTTTCCTTGATGGTTGCTGTCATCAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000216241.2 |
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| CDS GCA 72 bp | AGATCTAAAAGTCTGTTGTTCGCCTCTCCATGCTCATaGTGGTTTAGCTTAGACAGTATCAACATGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RSKSLLFASPCS*WFSLDSINMGA Trigger: AGCTCCCATGTTGATACTGTCTAAGCTAAACCAGCATGAGCATGGAGAGGCGAACAACAGACTTTTAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 |
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| CDS GCA 72 bp | TCTAAAAGTCTTCTGTTGTTCGCCTCTCCATGCTCATaGTGGTTTAGCTTAGACAGTATCAACATGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SKSLLLFASPCS*WFSLDSINMGA Trigger: AGCTCCCATGTTGATACTGTCTAAGCTAAACCAGCATGAGCATGGAGAGGCGAACAACAGAAGACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216241.2 |
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| CDS CCA 72 bp | GTCAGGATATTCCATATCATTAAAATTACCTGGGCCTaGCAGAAGGCCGACTTGGAAATCTTGTATACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VRIFHIIKITWA*QKADLEILYTS Trigger: GGAGGTATACAAGATTTCCAAGTCGGCCTTCTGCCAGGCCCAGGTAATTTTAATGATATGGAATATCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CCA 72 bp | TTTAGCTTAGACAGTATCAACATGGGAGCTAACGACTaGGCAGGTCTGGTAAATAAAGCACTGATGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSLDSINMGAND*AGLVNKALMTA Trigger: TGCTGTCATCAGTGCTTTATTTACCAGACCTGCCCAGTCGTTAGCTCCCATGTTGATACTGTCTAAGCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000133939.2 ENSMUST00000216241.2 |
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| CDS CCA 72 bp | TCATTAAAATTACCTGGGCCTGGCAGAAGGCCGACTTaGAAATCTTGTATACCTCCAAGAAAAGTTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: SLKLPGPGRRPT*KSCIPPRKVSH Trigger: ATGTGAAACTTTTCTTGGAGGTATACAAGATTTCCAAGTCGGCCTTCTGCCAGGCCCAGGTAATTTTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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| CDS CAA 72 bp | ATCATTAAAATTACCTGGGCCTGGCAGAAGGCCGACTaGGAAATCTTGTATACCTCCAAGAAAAGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: IIKITWAWQKAD*EILYTSKKSFT Trigger: TGTGAAACTTTTCTTGGAGGTATACAAGATTTCCAAGTCGGCCTTCTGCCAGGCCCAGGTAATTTTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033166.10 ENSMUST00000149535.2 ENSMUST00000216241.2 |
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