Pregenerated sensors for MFSD12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034854Ensembl transcript IDs: ENSMUST00000044844.9, ENSMUST00000132368.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGCGGCCGCGCTTCACCGCGCAGGACTTCAGACAGCGGGGCCTaGAGCGGCCCTGCCCGGCCATCGGCCAGCCTCCTCCGGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: HSGRASPRRTSDSGA*SGPARPSASLLRLS Trigger: TGAAAGCCGGAGGAGGCTGGCCGATGGCCGGGCAGGGCCGCTGCAGGCCCCGCTGTCTGAAGTCCTGCGCGGTGAAGCGCGGCCGCTGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | TGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTaGGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: CPWRGPVGRRPSNKP*AGNSRPWDGMRPAR Trigger: CCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | CTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCGCTaGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LEGPRWAPAIKQAVR*KFTPMGRDAAGQVW Trigger: CCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | GGGCTCACTCAGCAAGCTTGGCCGGGTACACCCACCCGCAGGCCGTaGCCTCTGATCCTGAGCAGGTTGGGGAGGGGGCAGGGTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GLTQQAWPGTPTRRP*PLILSRLGRGQGVC Trigger: GCAGACACCCTGCCCCCTCCCCAACCTGCTCAGGATCAGAGGGCACGGCCTGCGGGTGGGTGTACCCGGCCAAGCTTGCTGAGTGAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR TCA 90 bp | CGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGGTTCACCGGCCTaGCCAACTCAGAACCTGGTGATGCCTGGTACAAGCTGCCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: RPWDGMRPARCGSPA*PTQNLVMPGTSCPV Trigger: CACGGGGCAGCTTGTACCAGGCATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | CGGTCCTGTCCGCAGTGGTCACCAGGAACCAGTTCGGGGCAAAGCTaGCCTGGCGGTCCGACTATGTGCCGCTCCTGTCGCTGCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: RSCPQWSPGTSSGQS*PGGPTMCRSCRCHS Trigger: GCTGTGGCAGCGACAGGAGCGGCACATAGTCGGACCGCCAGGGCAGCTTTGCCCCGAACTGGTTCCTGGTGACCACTGCGGACAGGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | TGCCTCCCCGCAGCCTACACACAGCACTTGCGGGAGATGGCCTTCTaGGACCCCGCGATAACCGCGCAGTATCTCAACTCAGGCCCGCGC | + |
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Preference number: 1 (lower is better) Translates to: CLPAAYTQHLREMAF*DPAITAQYLNSGPR Trigger: GCGCGGGCCTGAGTTGAGATACTGCGCGGTTATCGCGGGGTCCCAGAAGGCCATCTCCCGCAAGTGCTGTGTGTAGGCTGCGGGGAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | CCACCCTCCCTCAGCAATGACTACGTGTCCCTGGAGGGGCCCCGTTaGGCGCCGGCCATCAAACAAGCCGTGCGCTGGAAATTCACGCCC | + |
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Preference number: 1 (lower is better) Translates to: PPSLSNDYVSLEGPR*APAIKQAVRWKFTP Trigger: GGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGTCATTGCTGAGGGAGGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | CGGTCGTGCACACCCGTGGGTCTCAAACTGACACCCTCCCTTCCGTaGCTCCCCGCAGCCTACACACAGCACTTGCGGGAGATGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSCTPVGLKLTPSLP*LPAAYTQHLREMAF Trigger: GAAGGCCATCTCCCGCAAGTGCTGTGTGTAGGCTGCGGGGAGGCACGGAAGGGAGGGTGTCAGTTTGAGACCCACGGGTGTGCACGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | GGGCCTTCCATGGTGCTGATGACAGGCCACCTCACGTGGGTCCCTTaGAAGCCCCACTCCTGCAGCCTGCATGGCCTCCCATGCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: GPSMVLMTGHLTWVP*KPHSCSLHGLPCMH Trigger: GTGCATGCATGGGAGGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGGCCTGTCATCAGCACCATGGAAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR TCA 90 bp | GGTGAGTATCCCACCTCCGGTCGTGCACACCCGTGGGTCTCAAACTaGCACCCTCCCTTCCGTGCCTCCCCGCAGCCTACACACAGCACT | + |
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Preference number: 1 (lower is better) Translates to: GEYPTSGRAHPWVSN*HPPFRASPQPTHST Trigger: AGTGCTGTGTGTAGGCTGCGGGGAGGCACGGAAGGGAGGGTGTCAGTTTGAGACCCACGGGTGTGCACGACCGGAGGTGGGATACTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | ACGGGCACATCCTGGACTCCTAGCTGGTCACCCACACTGATGTCCTaGTCGCCGTGTGCAGAGCCCTGCAAGTGCAGCAGCAGCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: TGTSWTPSWSPTLMS*SPCAEPCKCSSSQA Trigger: AGCCTGGCTGCTGCTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| 3UTR CCA 90 bp | CGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTaGTTCACCGGCCTGACCAACTCAGAACCTGGTGATGCCTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: RWKFTPMGRDAAGQV*FTGLTNSEPGDAWY Trigger: GTACCAGGCATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | CCACCTCACGTGGGTCCCTTGCAAGCCCCACTCCTGCAGCCTGCATaGCCTCCCATGCATGCACCATCTGTGGGGAGTTACAGGCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: PPHVGPLQAPLLQPA*PPMHAPSVGSYRLG Trigger: GCCTAGCCTGTAACTCCCCACAGATGGTGCATGCATGGGAGGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | CATCAAACAAGCCGTGCGCTGGAAATTCACGCCCATGGGACGGGATaGGGCCGGCCAGGTGTGGTTCACCGGCCTGACCAACTCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: HQTSRALEIHAHGTG*GRPGVVHRPDQLRT Trigger: GGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | AGCTGGTCACCCACACTGATGTCCTGCTCGCCGTGTGCAGAGCCCTaGAAGTGCAGCAGCAGCCAGGCTGCGCCGTACACGGTGATGTTA | + |
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Preference number: 1 (lower is better) Translates to: SWSPTLMSCSPCAEP*KCSSSQAAPYTVML Trigger: TAACATCACCGTGTACGGCGCAGCCTGGCTGCTGCTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| 3UTR CCA 90 bp | CAGGTGTGGTTCACCGGCCTGACCAACTCAGAACCTGGTGATGCCTaGTACAAGCTGCCCCGTGCTCTTGACACTCCGTACCGCGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: QVWFTGLTNSEPGDA*YKLPRALDTPYREA Trigger: GGCCTCGCGGTACGGAGTGTCAAGAGCACGGGGCAGCTTGTACCAGGCATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | ATGACTCTCACCCAGCACCTTGGCAAAGAGTTGGGACAGGAAAGCTaGCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: MTLTQHLGKELGQES*LGPAGRPGSVPTLP Trigger: AGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTGCTGGGTGAGAGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | GCACAGAGGAGATGGGTAGAAGGGGATGACTCTCACCCAGCACCTTaGCAAAGAGTTGGGACAGGAAAGCTGGCTGGGACCAGCAGGACG | + |
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Preference number: 1 (lower is better) Translates to: AQRRWVEGDDSHPAP*QRVGTGKLAGTSRT Trigger: CGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTGCTGGGTGAGAGTCATCCCCTTCTACCCATCTCCTCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | GATCCCCTACCCCTACCAGCAGCTCAGGTGGCTGGGATGGAGGTATaGAAGGGTTGTAAGTTAGGCATTTGCACACACCCACTCCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: DPLPLPAAQVAGMEV*KGCKLGICTHPLPS Trigger: GCTTGGGAGTGGGTGTGTGCAAATGCCTAACTTACAACCCTTGCATACCTCCATCCCAGCCACCTGAGCTGCTGGTAGGGGTAGGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | CTCCTTCCCCCAACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTaGTGCCAGGTCAACACTGACAACTGCCTCAAACAGGGCCATTCT | + |
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Preference number: 1 (lower is better) Translates to: LLPPTAISGSRLRQD*CQVNTDNCLKQGHS Trigger: AGAATGGCCCTGTTTGAGGCAGTTGTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGTTGGGGGAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | GACAACTGCCTCAAACAGGGCCATTCTCGGCTACAAGATATAGACTaGAGGTGGGAAAGTGCACAGAGGAGATGGGTAGAAGGGGATGAC | + |
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Preference number: 1 (lower is better) Translates to: DNCLKQGHSRLQDID*RWESAQRRWVEGDD Trigger: GTCATCCCCTTCTACCCATCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTGTTTGAGGCAGTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | TGCCTCAAACAGGGCCATTCTCGGCTACAAGATATAGACTGCAGGTaGGAAAGTGCACAGAGGAGATGGGTAGAAGGGGATGACTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: CLKQGHSRLQDIDCR*ESAQRRWVEGDDSH Trigger: GTGAGAGTCATCCCCTTCTACCCATCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTGTTTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CCA 90 bp | AGATCATGGCCCATACTTTGTGGCCTTTGTCACTGTGCCCTTACTTaGATGTGTCTTGAGGACAGAGATGGGGTGGAGACCCACGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: RSWPILCGLCHCALT*MCLEDRDGVETHAL Trigger: TAGAGCGTGGGTCTCCACCCCATCTCTGTCCTCAAGACACATCCAAGTAAGGGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | TACTCCCAAGCAGAGGGGTCTATTGATTCTCCTGTCTACAGGTGCTaGAGTGGCAGCCATGTGCCTGAATGCCCTCCCTTTTTAGATTCT | + |
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Preference number: 1 (lower is better) Translates to: YSQAEGSIDSPVYRC*SGSHVPECPPFLDS Trigger: AGAATCTAAAAAGGGAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAATAGACCCCTCTGCTTGGGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR GCA 90 bp | GATTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGCCTGAATaGCCTCCCTTTTTAGATTCTTGTGTGTATCCCGAGCTGTTCATA | + |
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Preference number: 1 (lower is better) Translates to: DSPVYRCCSGSHVPE*PPFLDSCVYPELFI Trigger: TATGAACAGCTCGGGATACACACAAGAATCTAAAAAGGGAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCACCCACCCGCAGGCCGTaGCCTCTGATCCTGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AVSQLRPALGVHAVEGQAPTRRP*PLILSR Trigger: CCTGCTCAGGATCAGAGGGCACGGCCTGCGGGTGGG...TGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGATACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGGTTCACCAGCAATGGGCAGAGGTaGGGGAGCGCAGGATGGGCG | + |
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Preference number: 2 (lower is better) Translates to: RWKFTPMGRDAAGQVWFTSNGQR*GSAGWA Trigger: CGCCCATCCTGCGCTCCCGCACCTCTGCCCATTGCT...GGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGACTCGCGCTGGGGGTGCATaGAGTGGAGGGACAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: AGTSRTPWLSPHPPSAMTRAGGA*SGGTGK Trigger: TTTGCCTGTCCCTCCACTGCATGCACCCCCAGCGCG...AGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 90 bp | CCAACTCAGAACCTGGTGATGCCTGGTACAAGCTGCCCCGTGCTCTaGACACTCCGTACCGCGAGGCCCACACGCGTTGGCACGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PTQNLVMPGTSCPVL*TLRTARPTRVGTAA Trigger: AGCAGCCGTGCCAACGCGTGTGGGCCTCGCGGTACGGAGTGTCAAGAGCACGGGGCAGCTTGTACCAGGCATCACCAGGTTCTGAGTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 90 bp | TGGGCCTTCCATGGTGCTGATGACAGGCCACCTCACGTGGGTCCCTaGCAAGCCCCACTCCTGCAGCCTGCATGGCCTCCCATGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: WAFHGADDRPPHVGP*QAPLLQPAWPPMHA Trigger: TGCATGCATGGGAGGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGGCCTGTCATCAGCACCATGGAAGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCAAATCCGTGGCAAGGAGTTCGGTaGGCTGAGGGGATGCGGACA | + |
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Preference number: 2 (lower is better) Translates to: SQLRPALGVHAVEGQANPWQGVR*AEGMRT Trigger: TGTCCGCATCCCCTCAGCTCACCGAACTCCTTGCCA...CGGATTTGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGACTACGTGTCCCTGGAGGGGCAGGGGGCAGGGTGTCTaGCTGGTCCTTCATAACGTC | + |
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Preference number: 2 (lower is better) Translates to: PWLSPHPPSAMTTCPWRGRGQGV*LVLHNV Trigger: GACGTTATGAAGGACCAGGCAGACACCCTGCCCCCT...GCCCCTCCAGGGACACGTAGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGCCAGACATGGAAAACGTGAGGCGGGAGGCTACTCGGCCCTCTGTTCTCACTCAGCAAGCTTaGCCGGGTACACCCACCCGC | + |
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Preference number: 2 (lower is better) Translates to: QAGPDMENVRREATRPSVLTQQA*PGTPTR Trigger: GCGGGTGGGTGTACCCGGCCAAGCTTGCTGAGTGAG...AACAGAGGGCCGAGTAGCCTCCCGCCTCACGTTTTCCATGTCTGGCCCTGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGACTTGGGGGTGCATGCAGTaGAGGGACAGGCAAATCCGT | + |
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Preference number: 2 (lower is better) Translates to: AGTSRTPWLSPHPPSAMTWGCMQ*RDRQIR Trigger: ACGGATTTGCCTGTCCCTCCACTGCATGCACCCCCA...AGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGACTACGTGTCCCTGGAGGGGCCAACTCAGAACCTGGTaGTGCCTGGTACAAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PWLSPHPPSAMTTCPWRGQLRTW*CLVQAA Trigger: GGCAGCTTGTACCAGGCATCACCAGGTTCTGAGTTG...GCCCCTCCAGGGACACGTAGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACTCAGACAGCGGGGCCTaGAGCGGCCCTGCCCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHSDSGA*SGPARP Trigger: TGGCCGGGCAGGGCCGCTGCAGGCCCCGCTGTCTGA...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTGAGGACAGAGATGGGGTGGAGACCCACGCTCTAGAGGGCATGACCTCCTTGGGACAGGAAAGCTaGCTGGGACCAGCAGGACGC | + |
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Preference number: 2 (lower is better) Translates to: CLEDRDGVETHALEGMTSLGQES*LGPAGR Trigger: GCGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCCAA...GGAGGTCATGCCCTCTAGAGCGTGGGTCTCCACCCCATCTCTGTCCTCAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 90 bp | CCCATGCATGCACCATCTGTGGGGAGTTACAGGCTAGGCACACCCTaGGTCCCTCCTTCCCCCAACAGCCATAAGTGGCTCAAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PMHAPSVGSYRLGTP*VPPSPNSHKWLKAE Trigger: CTCAGCCTTGAGCCACTTATGGCTGTTGGGGGAAGGAGGGACCAAGGGTGTGCCTAGCCTGTAACTCCCCACAGATGGTGCATGCATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | TTGATTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGCCTGAATGCCCTCAGCACTTGCGGGAGATaGCCTTCTGGGACCCCGCGA | + |
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Preference number: 2 (lower is better) Translates to: LILLSTGAAVAAMCLNALSTCGR*PSGTPR Trigger: TCGCGGGGTCCCAGAAGGCCATCTCCCGCAAGTGCT...GAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCATTCTCGGCTACAAGATATAGACTGCAGGTGGGAAAGTGCACAGAGGAGAGCGGCCGGCCAGGTGTaGTTCACCGGCCTGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: GHSRLQDIDCRWESAQRRAAGQV*FTGLTN Trigger: GTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGC...TCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 90 bp | TGTTGCTGGGATACCTTTGTCCCTGTCAACAATGGCCCCAGGGCCTaGGTGACTAGAGCCTCTGGGCAGGCAGGGCCAGACATGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: CCWDTFVPVNNGPRA*VTRASGQAGPDMEN Trigger: GTTTTCCATGTCTGGCCCTGCCTGCCCAGAGGCTCTAGTCACCAAGGCCCTGGGGCCATTGTTGACAGGGACAAAGGTATCCCAGCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTGCCAGGTCAACACCCTACACACAGCACTTaGGGGAGATGGCCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PNSHKWLKAEAGLLPGQHPTHST*GRWPSG Trigger: CCCAGAAGGCCATCTCCCGCAAGTGCTGTGTGTAGG...GTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGCCAGACATGGAAAACGTGAGGCGGGAGGCTACTCGGCCCTCTGTTAGTGCACAGAGGAGATaGGTAGAAGGGGATGACTCT | + |
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Preference number: 2 (lower is better) Translates to: QAGPDMENVRREATRPSVSAQRR*VEGDDS Trigger: AGAGTCATCCCCTTCTACCCATCTCCTCTGTGCACT...AACAGAGGGCCGAGTAGCCTCCCGCCTCACGTTTTCCATGTCTGGCCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCTGCCCGCTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGAGGCTGAGGCAGGATTaGTGCCAGGTCAACACTGAC | + |
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Preference number: 2 (lower is better) Translates to: TVAARFPVAGIPLSLSTMRLRQD*CQVNTD Trigger: GTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCT...CATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAGCGGGCAGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGGCCCCAGGGCCTTGCCACAGAGATCCTCCTaGCTTGGCACACTTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LPCCWDTFVPVNNGPRALPQRSS*LGTLSV Trigger: GACACTAAGTGTGCCAAGGCAGGAGGATCTCTGTGG...CAAGGCCCTGGGGCCATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR-3UTR CCA 90 bp | TTGATTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGCCTGAATGCCCTCCCCAACAGCCATAAGTaGCTCAAGGCTGAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LILLSTGAAVAAMCLNALPNSHK*LKAEAG Trigger: TCCTGCCTCAGCCTTGAGCCACTTATGGCTGTTGGG...GAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGGGGTCTATTGATTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGATGGCCTCCCATGCATaGACCATCTGTGGGGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: AEGSIDSPVYRCCSGSHVMASHA*TICGEL Trigger: TAACTCCCCACAGATGGTGCATGCATGGGAGGCCAT...CACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAATAGACCCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTGGCTGCCCGCTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGAGGTCTGCTCACACTTaGGCCTTCCATGGTGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TVAARFPVAGIPLSLSTMRSAHT*AFHGAD Trigger: ATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCT...CATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAGCGGGCAGCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACACCTTGGCAAAGAGTTaGGACAGGAAAGCTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHTLAKS*DRKAGW Trigger: CCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGT...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACGATATAGACTGCAGGTaGGAAAGTGCACAGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHDIDCR*ESAQRR Trigger: TCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATC...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGTGGATCTCTAGATCATGGCCCATACTTTGTGGCCTTTGTCACTGTGCCTGTAAGTTAGGCATTTaGACACACCCACTCCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLWISRSWPILCGLCHCACKLGI*THPLPS Trigger: GCTTGGGAGTGGGTGTGTGCAAATGCCTAACTTACA...GGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | TGCCCTGGCGGTCCGACTATGTGCCGCTCCTGTCGCTaGCACAGCGGCCGCGCTTCACCGCGCAGGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CPGGPTMCRSCR*HSGRASPRRTS Trigger: TGAAGTCCTGCGCGGTGAAGCGCGGCCGCTGTGGCAGCGACAGGAGCGGCACATAGTCGGACCGCCAGGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | CCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCGCTaGAAATTCACGCCCATGGGACGGGATGCGGCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRWAPAIKQAVR*KFTPMGRDAAG Trigger: GCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | AGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTaGGCTGGAAATTCACGCCCATGGGACGGGATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: RGPVGRRPSNKP*AGNSRPWDGMR Trigger: CCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | CCCACCTCCGGTCGTGCACACCCGTGGGTCTCAAACTaGCACCCTCCCTTCCGTGCCTCCCCGCAGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PTSGRAHPWVSN*HPPFRASPQPT Trigger: TGTAGGCTGCGGGGAGGCACGGAAGGGAGGGTGTCAGTTTGAGACCCACGGGTGTGCACGACCGGAGGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | CCGCAGTGGTCACCAGGAACCAGTTCGGGGCAAAGCTaGCCTGGCGGTCCGACTATGTGCCGCTCCTGTCGC | + |
|
Preference number: 3 (lower is better) Translates to: PQWSPGTSSGQS*PGGPTMCRSCR Trigger: GCGACAGGAGCGGCACATAGTCGGACCGCCAGGGCAGCTTTGCCCCGAACTGGTTCCTGGTGACCACTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | AGCCGTGCGCTGGAAATTCACGCCCATGGGACGGGATaGGGCCGGCCAGGTGTGGTTCACCGGCCTGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRALEIHAHGTG*GRPGVVHRPDQ Trigger: TTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | GAGCCTCTGGGCAGGCAGGGCCAGACATGGAAAACGTaGGGCGGGAGGCTACTCGGCCCTCTGTTCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EPLGRQGQTWKT*GGRLLGPLFPQ Trigger: CTGAGGGAACAGAGGGCCGAGTAGCCTCCCGCCTCACGTTTTCCATGTCTGGCCCTGCCTGCCCAGAGGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | CTGATGTCCTGCTCGCCGTGTGCAGAGCCCTGCAAGTaGAGCAGCAGCCAGGCTGCGCCGTACACGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LMSCSPCAEPCK*SSSQAAPYTVM Trigger: CATCACCGTGTACGGCGCAGCCTGGCTGCTGCTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGACATCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
||
| 3UTR CCA 72 bp | GTGGTCACCAGGAACCAGTTCGGGGCAAAGCTGCCCTaGCGGTCCGACTATGTGCCGCTCCTGTCGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VVTRNQFGAKLP*RSDYVPLLSLP Trigger: TGGCAGCGACAGGAGCGGCACATAGTCGGACCGCCAGGGCAGCTTTGCCCCGAACTGGTTCCTGGTGACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | GGGACAGGAAAGCTGGCTGGGACCAGCAGGACGCCCTaGCTCAGTCCCCACCCTCCCTCAGCAATGACTACG | + |
|
Preference number: 3 (lower is better) Translates to: GTGKLAGTSRTP*LSPHPPSAMTT Trigger: CGTAGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | GACGGGATGCGGCCGGCCAGGTGTGGTTCACCGGCCTaGCCAACTCAGAACCTGGTGATGCCTGGTACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DGMRPARCGSPA*PTQNLVMPGTS Trigger: GCTTGTACCAGGCATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | ACACCCGTGGGTCTCAAACTGACACCCTCCCTTCCGTaGCTCCCCGCAGCCTACACACAGCACTTGCGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPVGLKLTPSLP*LPAAYTQHLRE Trigger: CTCCCGCAAGTGCTGTGTGTAGGCTGCGGGGAGGCACGGAAGGGAGGGTGTCAGTTTGAGACCCACGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | ATGGTGCTGATGACAGGCCACCTCACGTGGGTCCCTTaGAAGCCCCACTCCTGCAGCCTGCATGGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MVLMTGHLTWVP*KPHSCSLHGLP Trigger: TGGGAGGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGGCCTGTCATCAGCACCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | TTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTaGTTCACCGGCCTGACCAACTCAGAACCTGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FTPMGRDAAGQV*FTGLTNSEPGD Trigger: ATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | CTCAGCAATGACTACGTGTCCCTGGAGGGGCCCCGTTaGGCGCCGGCCATCAAACAAGCCGTGCGCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSNDYVSLEGPR*APAIKQAVRWK Trigger: TTTCCAGCGCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGTCATTGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | AGCACCTTGGCAAAGAGTTGGGACAGGAAAGCTGGCTaGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: STLAKSWDRKAG*DQQDALAQSPP Trigger: GGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | ACCCAGCACCTTGGCAAAGAGTTGGGACAGGAAAGCTaGCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TQHLGKELGQES*LGPAGRPGSVP Trigger: GGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTGCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | GGGCCTTCCATGGTGCTGATGACAGGCCACCTCACGTaGGTCCCTTGCAAGCCCCACTCCTGCAGCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPSMVLMTGHLT*VPCKPHSCSLH Trigger: ATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGGCCTGTCATCAGCACCATGGAAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | AGCCCCACTCCTGCAGCCTGCATGGCCTCCCATGCATaGACCATCTGTGGGGAGTTACAGGCTAGGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: SPTPAACMASHA*TICGELQARHT Trigger: GGTGTGCCTAGCCTGTAACTCCCCACAGATGGTGCATGCATGGGAGGCCATGCAGGCTGCAGGAGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | GGAGGCTACTCGGCCCTCTGTTCCCTCAGGCACCCTTaGACTCTACTTCCCCGACCATCTCTACCGGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGYSALCSLRHP*TLLPRPSLPVG Trigger: ACCCACCGGTAGAGATGGTCGGGGAAGTAGAGTTCAAGGGTGCCTGAGGGAACAGAGGGCCGAGTAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | GCAGCCTACACACAGCACTTGCGGGAGATGGCCTTCTaGGACCCCGCGATAACCGCGCAGTATCTCAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: AAYTQHLREMAF*DPAITAQYLNS Trigger: TGAGTTGAGATACTGCGCGGTTATCGCGGGGTCCCAGAAGGCCATCTCCCGCAAGTGCTGTGTGTAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | AGGCCCTGGGCTCTGCATGTTCAGCGATGCCACCAGTaGTCCCAGAGCATTCTCCCCAACCCAAGACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPWALHVQRCHQ*SQSILPNPRLR Trigger: CCTAAGTCTTGGGTTGGGGAGAATGCTCTGGGATCACTGGTGGCATCGCTGAACATGCAGAGCCCAGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | ACTCTACTTCCCCGACCATCTCTACCGGTGGGTTCCTaGCCTTGGTCCCTTTCTTCACCCAGACCCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: TLLPRPSLPVGS*PWSLSSPRPQI Trigger: GATCTGGGGTCTGGGTGAAGAAAGGGACCAAGGGCAGGAACCCACCGGTAGAGATGGTCGGGGAAGTAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | GCTGAGGTCTTAGACTGTGGCTGCCCGCTTCCCTGTTaGTGGGATACCTTTGTCCCTGTCAACAATGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AEVLDCGCPLPC*WDTFVPVNNGP Trigger: GGGGCCATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAGCGGGCAGCCACAGTCTAAGACCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | TTCACCGGCCTGACCAACTCAGAACCTGGTGATGCCTaGTACAAGCTGCCCCGTGCTCTTGACACTCCGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FTGLTNSEPGDA*YKLPRALDTPY Trigger: GTACGGAGTGTCAAGAGCACGGGGCAGCTTGTACCAGGCATCACCAGGTTCTGAGTTGGTCAGGCCGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | AGATGGGTAGAAGGGGATGACTCTCACCCAGCACCTTaGCAAAGAGTTGGGACAGGAAAGCTGGCTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: RWVEGDDSHPAP*QRVGTGKLAGT Trigger: GGTCCCAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTGCTGGGTGAGAGTCATCCCCTTCTACCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | ACCCTTGAACTCTACTTCCCCGACCATCTCTACCGGTaGGTTCCTGCCCTTGGTCCCTTTCTTCACCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLELYFPDHLYR*VPALGPFLHPD Trigger: GTCTGGGTGAAGAAAGGGACCAAGGGCAGGAACCCACCGGTAGAGATGGTCGGGGAAGTAGAGTTCAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGTGGATCTCTAGATCATGGCCCATACTTTGTGGCCTTTGTCACTGTGCCAGGCTAGGCACACCCTaGGTCCCTCCTTCCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLWISRSWPILCGLCHCARLGTP*VPPSPN Trigger: GTTGGGGGAAGGAGGGACCAAGGGTGTGCCTAGCCT...GGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | GTGGGAAAGTGCACAGAGGAGATGGGTAGAAGGGGATaGCTCTCACCCAGCACCTTGGCAAAGAGTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VGKCTEEMGRRG*LSPSTLAKSWD Trigger: GTCCCAACTCTTTGCCAAGGTGCTGGGTGAGAGTCATCCCCTTCTACCCATCTCCTCTGTGCACTTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | GTGCTGCCACTCATACTCCCAAGCAGAGGGGTCTATTaGTTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLPLILPSRGVY*FSCLQVLQWQP Trigger: TGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAATAGACCCCTCTGCTTGGGAGTATGAGTGGCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | ACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTaGCAGGTCAACACTGACAACTGCCTCAAACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TAISGSRLRQDC*QVNTDNCLKQG Trigger: GCCCTGTTTGAGGCAGTTGTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | GCAGAGGGGTCTATTGATTCTCCTGTCTACAGGTGCTaGAGTGGCAGCCATGTGCCTGAATGCCCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AEGSIDSPVYRC*SGSHVPECPPF Trigger: AAAGGGAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAATAGACCCCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | CCCCTACCAGCAGCTCAGGTGGCTGGGATGGAGGTATaGAAGGGTTGTAAGTTAGGCATTTGCACACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLPAAQVAGMEV*KGCKLGICTHP Trigger: TGGGTGTGTGCAAATGCCTAACTTACAACCCTTGCATACCTCCATCCCAGCCACCTGAGCTGCTGGTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACCACCTTGGCAAAGAGTaGGGACAGGAAAGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHHLGKE*GQESWL Trigger: CAGCCAGCTTTCCTGTCCCAACTCTTTGCCAAGGTG...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | GCATTTGCACACACCCACTCCCAAGCAGACAGGTGCTaGCACTCATACTCCCAAGCAGAGGGGTCTATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AFAHTHSQADRC*HSYSQAEGSID Trigger: ATCAATAGACCCCTCTGCTTGGGAGTATGAGTGGCAGCACCTGTCTGCTTGGGAGTGGGTGTGTGCAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | CAGGGCCATTCTCGGCTACAAGATATAGACTGCAGGTaGGAAAGTGCACAGAGGAGATGGGTAGAAGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QGHSRLQDIDCR*ESAQRRWVEGD Trigger: ATCCCCTTCTACCCATCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | AGCAGAAAAGTCCCATTTCATAGGTCTGCTCACACTTaGGCCTTCCATGGTGCTGATGACAGGCCACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRKVPFHRSAHT*AFHGADDRPPH Trigger: GTGAGGTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATGGGACTTTTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | CCCATACTTTGTGGCCTTTGTCACTGTGCCCTTACTTaGATGTGTCTTGAGGACAGAGATGGGGTGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: PILCGLCHCALT*MCLEDRDGVET Trigger: GGTCTCCACCCCATCTCTGTCCTCAAGACACATCCAAGTAAGGGCACAGTGACAAAGGCCACAAAGTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR TCA 72 bp | TCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGCCTaGATGCCCTCCCTTTTTAGATTCTTGTGTGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: SCLQVLQWQPCA*MPSLFRFLCVS Trigger: GGATACACACAAGAATCTAAAAAGGGAGGGCATTCAGGCACATGGCTGCCACTGCAGCACCTGTAGACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR GCA 72 bp | TGGTTGTTGCTGTTTATTGTCATGAGATACACAGGATaGACTAGCAGAATGAGCAGGCCCTGGGCTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: WLLLFIVMRYTG*TSRMSRPWALH Trigger: ATGCAGAGCCCAGGGCCTGCTCATTCTGCTAGTGCATCCTGTGTATCTCATGACAATAAACAGCAACAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | TCCCCAACCCAAGACTTAGGTATCCACTTCCTTCTGTaGATCTCTAGATCATGGCCCATACTTTGTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPTQDLGIHFLL*ISRSWPILCGL Trigger: AAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAGGAAGTGGATACCTAAGTCTTGGGTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| 3UTR CCA 72 bp | TTAGGTATCCACTTCCTTCTGTGGATCTCTAGATCATaGCCCATACTTTGTGGCCTTTGTCACTGTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGIHFLLWISRS*PILCGLCHCAL Trigger: AAGGGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAGGAAGTGGATACCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCCACCTCACGTGGGTCCCTTGCAAGCCCCACTCCTGCAGCCTGCATGGCCCGGCGCACAGGTCGTTaGGGAAGTGGCCGACCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QATSRGSLASPTPAACMARRTGR*GSGRPR Trigger: TCGCGGTCGGCCACTTCCTCAACGACCTGTGCGCCG...GGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR GCA 90 bp | CCACCTCACGTGGGTCCCTTGCAAGCCCCACTCCTGCAGCCTGCATGGCCTCCCAGCCCACGAGCGGCGTaGAGAGCCCGTCGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PPHVGPLQAPLLQPAWPPSPRAA*RARRPL Trigger: AAGTGGCCGACGGGCTCTGCACGCCGCTCGTGGGCT...GGGAGGCCATGCAGGCTGCAGGAGTGGGGCTTGCAAGGGACCCACGTGAGGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCGCAGGATGGGCGTGGCCTGGTGGGCTCGGTCAGCATAAGGATTTGGCAGCCCATTCAGGCGTaGCTTCCCCGCAGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAQDGRGLVGSVSIRIWQPIQA*LPRSPG Trigger: GCCTGGGCTGCGGGGAAGCCACGCCTGAATGGGCTG...CCAAATCCTTATGCTGACCGAGCCCACCAGGCCACGCCCATCCTGCGCTCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | ACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCGGGATGAGGCTCAGGTaGGCAATCTGCGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTCPWRGPVGRRPSNKPCGMRLR*AICVAA Trigger: GGCTGCCACGCAGATTGCCCACCTGAGCCTCATCCC...GCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | ACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCCTCAGGTGGGCAATCTaGGTGGCAGCCCAGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTCPWRGPVGRRPSNKPCLRWAI*VAAQPN Trigger: GTTTGGCTGGGCTGCCACGCAGATTGCCCACCTGAG...GCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | GCCGTGCGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGGCTGCACAGCCATGACTaGCAGTCCGTTGGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVRWKFTPMGRDAAGQVWLHSHD*QSVGHL Trigger: AAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAG...CCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 72 bp | TCCCTTCCGTGCCTCCCCGCAGCCTACACACAGCACTaGCGGGAGATGGCCTTCTGGGACCCCGCGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: SLPCLPAAYTQH*REMAFWDPAIT Trigger: GGTTATCGCGGGGTCCCAGAAGGCCATCTCCCGCAAGTGCTGTGTGTAGGCTGCGGGGAGGCACGGAAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR TCA 90 bp | GGCACATCCTGGACTCCTAGCTGGTCACCCACACTGATGTCCTGCTCGCCGTGTCGGCGCACAGGTCGTTaGGGAAGTGGCCGACCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTSWTPSWSPTLMSCSPCRRTGR*GSGRPR Trigger: TCGCGGTCGGCCACTTCCTCAACGACCTGTGCGCCG...ACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS-3UTR TCA 90 bp | GCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCAGGCTCTGCACAGCCATaGCTGCCAGTCCGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVSQLRPALGVHAVEGQAGSAQP*LPVRWP Trigger: TGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCC...TGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGATACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | ACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCCACACCCAGATTATCTaGCAGGGCCACCCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTCPWRGPVGRRPSNKPCHTQII*QGHPSC Trigger: GCAGCTTGGGTGGCCCTGGCAGATAATCTGGGTGTG...GCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR GCA 90 bp | ACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCCAGGGATGCAGGCTCTaGACAGCCATGACTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTCPWRGPVGRRPSNKPCQGCRL*TAMTAS Trigger: ACTGGCAGTCATGGCTGTGCAGAGCCTGCATCCCTG...GCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR GCA 90 bp | ACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGTGCTCAGAGGGACAGGGATaGAGGCTCTGCACAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TTCPWRGPVGRRPSNKPCSEGQG*RLCTAM Trigger: CATGGCTGTGCAGAGCCTGCATCCCTGTCCCTCTGA...GCACGGCTTGTTTGATGGCCGGCGCCCAACGGGGCCCCTCCAGGGACACGTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GGCACATCCTGGACTCCTAGCTGGTCACCCACACTGATGTCCTGCTCGCCGTGTCAGCCCATTCAGGCGTaGCTTCCCCGCAGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSWTPSWSPTLMSCSPCQPIQA*LPRSPG Trigger: GCCTGGGCTGCGGGGAAGCCACGCCTGAATGGGCTG...ACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS-3UTR CCA 90 bp | GCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCAAGGTCGTTGAGGAAGTaGCCGACCGCGAAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSQLRPALGVHAVEGQARSLRK*PTAKLS Trigger: GCTGAGCTTCGCGGTCGGCCACTTCCTCAACGACCT...TGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGATACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR GCA 90 bp | TACACGGTGATGTTAGCCACCACAGTGAACGCATACCTGAGGGCCGTGAGCTCCAGCCCACGAGCGGCGTaGAGAGCCCGTCGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YTVMLATTVNAYLRAVSSSPRAA*RARRPL Trigger: AAGTGGCCGACGGGCTCTGCACGCCGCTCGTGGGCT...GGAGCTCACGGCCCTCAGGTATGCGTTCACTGTGGTGGCTAACATCACCGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS-3UTR CCA 90 bp | GGCCATCAAACAAGCCGTGCGCTGGAAATTCACGCCCATGGGACGGGATGCGGCGGTGGGCAATCTGCGTaGCAGCCCAGCCAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHQTSRALEIHAHGTGCGGGQSA*QPSQTG Trigger: TCCAGTTTGGCTGGGCTGCCACGCAGATTGCCCACC...GCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCGCACGGCTTGTTTGATGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| 3UTR CAA 72 bp | GGGAGGCTACTCGGCCCTCTGTTCCCTCAGGCACCCTaGAACTCTACTTCCCCGACCATCTCTACCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLLGPLFPQAP*NSTSPTISTGG Trigger: CCCACCGGTAGAGATGGTCGGGGAAGTAGAGTTCAAGGGTGCCTGAGGGAACAGAGGGCCGAGTAGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR TCA 90 bp | CCCACACTGATGTCCTGCTCGCCGTGTGCAGAGCCCTGCAAGTGCAGCAGCAGCATAGTAGCAGGTAGGTaGACCACATGCCGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTLMSCSPCAEPCKCSSSIVAGR*TTCRRT Trigger: TGTGCGCCGGCATGTGGTTCACCTACCTGCTACTAT...GCTGCTGCTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGACATCAGTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGGCCAGACATGGAAAACGTGAGGCGGGAGGCTACTCGGCCCTCTGTTTCACCAGCTCTGGGATaGGGCTCAGGTGGGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGPDMENVRREATRPSVSPALG*GSGGQS Trigger: AGATTGCCCACCTGAGCCTCATCCCAGAGCTGGTGA...AACAGAGGGCCGAGTAGCCTCCCGCCTCACGTTTTCCATGTCTGGCCCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR TCA 90 bp | CTACCGGTGGGTTCCTGCCCTTGGTCCCTTTCTTCACCCAGACCCCAGATCCCCGCGTGTGTGGGCCAATaGGGTCAGCTGTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPVGSCPWSLSSPRPQIPACVGQ*GQLSWL Trigger: TAGCCATGACAGCTGACCTCATTGGCCCACACACGC...GGGGATCTGGGGTCTGGGTGAAGAAAGGGACCAAGGGCAGGAACCCACCGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GAACGCATACCTGAGGGCCGTGAGCTCCACCTTCTCGTGGTCACTGGTCACCAGAGGTCGTTGAGGAAGTaGCCGACCGCGAAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERIPEGRELHLLVVTGHQRSLRK*PTAKLS Trigger: GCTGAGCTTCGCGGTCGGCCACTTCCTCAACGACCT...CTGGTGACCAGTGACCACGAGAAGGTGGAGCTCACGGCCCTCAGGTATGCGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGACTGCAGCCCAGCCAAACTaGAAGACGACAATGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGTSRTPWLSPHPPSAMTAAQPN*KTTMKG Trigger: ACCCTTCATTGTCGTCTTCCAGTTTGGCTGGGCTGC...AGTCATTGCTGAGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GGCACATCCTGGACTCCTAGCTGGTCACCCACACTGATGTCCTGCTCGCCGTGTGGTGGGCAATCTGCGTaGCAGCCCAGCCAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTSWTPSWSPTLMSCSPCGGQSA*QPSQTG Trigger: TCCAGTTTGGCTGGGCTGCCACGCAGATTGCCCACC...ACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTGGGACCAGCAGGACGCCCTGGCTCAGTCCCCACCCTCCCTCAGCAATGAGACAGGTTCACAATaGGCCTTGTGGTCATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AGWDQQDALAQSPPSLSNETGSQ*ALWSCT Trigger: TGTACATGACCACAAGGCTCATTGTGAACCTGTCTC...ATTGCTGAGGGAGGGTGGGGACTGAGCCAGGGCGTCCTGCTGGTCCCAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | ACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTGCCAGGTCAACACTGACGCAGAGCCCTGCAAGTaGAGCAGCAGCCAGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAISGSRLRQDCCQVNTDAEPCK*SSSQAA Trigger: CGCAGCCTGGCTGCTGCTGCACTTGCAGGGCTCTGC...GTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GCGGGAGCGCAGGATGGGCGTGGCCTGGTGGGCTCGGTCAGCATAAGGATTTGGTATGCGCCGGTTGACTaGCTTCATGAGGAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGAQDGRGLVGSVSIRIWYAPVD*LHEEGR Trigger: TCTTCCTTCCTCATGAAGCCAGTCAACCGGCGCATA...CCAAATCCTTATGCTGACCGAGCCCACCAGGCCACGCCCATCCTGCGCTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR TCA 90 bp | CTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGGCCCCAGGGCCTTGCCCAGTGGTAGAAGCTaGTGCAGGCCCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPCCWDTFVPVNNGPRALPSGRS*CRPHST Trigger: TGTGCTGTGGGGCCTGCATCAGCTTCTACCACTGGG...CAAGGCCCTGGGGCCATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | ACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTGCCAGGTCAACACTGACCCGTGTGCAGAGCCCTaGAAGTGCAGCAGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAISGSRLRQDCCQVNTDPCAEP*KCSSSQ Trigger: CTGGCTGCTGCTGCACTTGCAGGGCTCTGCACACGG...GTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CCCAACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTGCCAGGTCAACACACTGGTCACCAGCTCTaGGATGAGGCTCAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSHKWLKAEAGLLPGQHTGHQL*DEAQVG Trigger: GCCCACCTGAGCCTCATCCCAGAGCTGGTGACCAGT...GTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CAGGGCCATTCTCGGCTACAAGATATAGACTGCAGGTGGGAAAGTGCACAGAGGTTTCCACAGCAGCAGTaGCTGGGCCGCTGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGHSRLQDIDCRWESAQRFPQQQ*LGRWGH Trigger: GTGGCCCCAGCGGCCCAGCCACTGCTGCTGTGGAAA...CCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCATCCTTGGTACCCAAGTaGAAGAGCAGAGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVSQLRPALGVHAVEGQASLVPK*KSREKM Trigger: CATCTTCTCTCTGCTCTTCCACTTGGGTACCAAGGA...TGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGATACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | CGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGGTTCACCTGGTCATGTACAGCATaGCTACCTGATAAAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWKFTPMGRDAAGQVWFTWSCTA*LPDKKL Trigger: CAGCTTTTTATCAGGTAGGCATGCTGTACATGACCA...GGTGAACCACACCTGGCCGGCCGCATCCCGTCCCATGGGCGTGAATTTCCAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGGCCCCAGGGCCTTGTCCTGGACTCCTAGCTaGTCACCCACACTGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPCCWDTFVPVNNGPRALSWTPS*SPTLMS Trigger: GGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGA...CAAGGCCCTGGGGCCATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGGTCTATTGATTCTCCTGTCTACAGGTGCTGCAGTGGCAGCCATGTGAACACGGGCACATCCTaGACTCCTAGCTGGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AEGSIDSPVYRCCSGSHVNTGTS*TPSWSP Trigger: GGGTGACCAGCTAGGAGTCCAGGATGTGCCCGTGTT...CACATGGCTGCCACTGCAGCACCTGTAGACAGGAGAATCAATAGACCCCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | CTTCTGTGGATCTCTAGATCATGGCCCATACTTTGTGGCCTTTGTCACTGTGCCCAGGGCCACCCAAGCTaGGAAGGCCAGGATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWISRSWPILCGLCHCAQGHPS*EGQDHQ Trigger: CTGGTGATCCTGGCCTTCGCAGCTTGGGTGGCCCTG...GGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | GCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGGGACAGGCAAATAGGTCAGGTACATaGCAATGTAGGTCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVSQLRPALGVHAVEGQANRSGT*QCRSET Trigger: TGTCTCAGACCTACATTGCCATGTACCTGACCTATT...TGCCTGTCCCTCCACTGCATGCACCCCCAGCGCGGGCCTGAGTTGAGATACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR TCA 90 bp | CAGGGCCATTCTCGGCTACAAGATATAGACTGCAGGTGGGAAAGTGCACAGAGGATAGTAGCAGGTAGGTaGACCACATGCCGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGHSRLQDIDCRWESAQRIVAGR*TTCRRT Trigger: TGTGCGCCGGCATGTGGTTCACCTACCTGCTACTAT...CCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR GCA 90 bp | TGCCCTCCCTTTTTAGATTCTTGTGTGTATCCCGAGCTGTTCATAAGCCCACAGGTCCTGCTCGCCGTGTaGAGAGCCCTGCAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPPFLDSCVYPELFISPQVLLAV*RALQVQ Trigger: CTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGAC...CTGTGGGCTTATGAACAGCTCGGGATACACACAAGAATCTAAAAAGGGAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACACCTGTGGCCCTCCTTaGTACCCAAGTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHTCGPP*YPSGRA Trigger: TGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGT...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CTTCTGTGGATCTCTAGATCATGGCCCATACTTTGTGGCCTTTGTCACTGTGCCCAGTGCTGGGACCTGTaGCCCTCCTTGGTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWISRSWPILCGLCHCAQCWDL*PSLVPK Trigger: CTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTG...GGCACAGTGACAAAGGCCACAAAGTATGGGCCATGATCTAGAGATCCACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CCA 90 bp | CATTTCATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACAGAGCAGAGAGAAGATaGCTCCCACACCCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HFIGLLTLGPSMVLMTGHRAERR*LPHPPQ Trigger: TTGTGGTGGGTGTGGGAGCCATCTTCTCTCTGCTCT...GTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTATGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR TCA 90 bp | ACTGTGGCTGCCCGCTTCCCTGTTGCTGGGATACCTTTGTCCCTGTCAACAATGACTTCTTGGGCAAGCTaGGAGAATAGGTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TVAARFPVAGIPLSLSTMTSWAS*ENRSGT Trigger: TGTACCTGACCTATTCTCTCAGCTTGCCCAAGAAGT...CATTGTTGACAGGGACAAAGGTATCCCAGCAACAGGGAAGCGGGCAGCCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS GCA 90 bp | GTGGCTTCCCCGCAGCCCAGGCACGGGCCGCTAGGTGCCAGGCCTTaGGGGGCCCACAGCGCACGCAGGAGGCGCGGTCCGCCTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VASPQPRHGPLGARP*GAHSARRRRGPPRS Trigger: GCTACGAGGCGGACCGCGCCTCCTGCGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGCGGCCCGTGCCTGGGCTGCGGGGAAGCCAC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
||
| CDS GCA 90 bp | GGAAGGAGAGCAGGACACAGACAGTGCCCGCTAGGTGCCAGGCCTTaGGGGGCCCACAGCGCACGCAGGAGGCGCGGTCCGCCTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRAGHRQCPLGARP*GAHSARRRRGPPRS Trigger: GCTACGAGGCGGACCGCGCCTCCTGCGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGCGGGCACTGTCTGTGTCCTGCTCTCCTTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCGCCGTACACGGTGATGTTAGCCACCACAGTGAACGCATACCTGAGGGCGCTAGGTGCCAGGCCTaGCGGGGCCCACAGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GCAVHGDVSHHSERIPEGARCQA*RGPQRT Trigger: CGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGC...GCCCTCAGGTATGCGTTCACTGTGGTGGCTAACATCACCGTGTACGGCGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
||
| CDS-3UTR CAA 90 bp | ATACCTGAGGGCCGTGAGCTCCACCTTCTCGTGGTCACTGGTCACCAGCTCTGGCCGGCGCACAGGTCGTaGAGGAAGTGGCCGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: IPEGRELHLLVVTGHQLWPAHRS*RKWPTA Trigger: CGCGGTCGGCCACTTCCTCAACGACCTGTGCGCCGG...CCAGAGCTGGTGACCAGTGACCACGAGAAGGTGGAGCTCACGGCCCTCAGGTAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
||
| CDS TCA 90 bp | TCCGGAACACGGGCACATCCTGGACTCCTAGCTGGTCACCCACACTaGTGTCCTGCTCGCCGTGTGCAGAGCCCTGCAAGTGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTRAHPGLLAGHPH*CPARRVQSPASAAA Trigger: TGCTGCTGCACTTGCAGGGCTCTGCACACGGCGAGCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCCCGTGTTCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATAAGTGGCTCAAGGCTGAGGCAGGATTGCTGCCAGGTCAACACTGACCCGGCGCACAGGTCGTaGAGGAAGTGGCCGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAISGSRLRQDCCQVNTDPAHRS*RKWPTA Trigger: CGCGGTCGGCCACTTCCTCAACGACCTGTGCGCCGG...GTCAGTGTTGACCTGGCAGCAATCCTGCCTCAGCCTTGAGCCACTTATGGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
||
| CDS CCA 90 bp | TCGTTCCCCCAGTGCTGGGACCTGTGGCCCTCCTTGGTACCCAAGTaGAAGAGCAGAGAGAAGATGGCTCCCACACCCACCACAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFPQCWDLWPSLVPK*KSREKMAPTPTTSR Trigger: CCTGCTTGTGGTGGGTGTGGGAGCCATCTTCTCTCTGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTGGGGGAACGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CAA 90 bp | GGCCATTCTCGGCTACAAGATATAGACTGCAGGTGGGAAAGTGCACAGAGGAGAGCTAGGTGCCAGGCCTaGCGGGGCCCACAGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: GHSRLQDIDCRWESAQRRARCQA*RGPQRT Trigger: CGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGC...TCTCCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 90 bp | GCTCATTGGGTTCGTTCCCCCAGTGCTGGGACCTGTGGCCCTCCTTaGTACCCAAGTGGAAGAGCAGAGAGAAGATGGCTCCCACACCCA | + |
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Preference number: 5 (lower is better) Translates to: AHWVRSPSAGTCGPP*YPSGRAERRWLPHP Trigger: TGGGTGTGGGAGCCATCTTCTCTCTGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTGGGGGAACGAACCCAATGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS TCA 90 bp | GGTGGGCAATCTGCGTGGCAGCCCAGCCAAACTGGAAGACGACAATaGAGGGTCCATAGTACAGCAAGGCAGCCCATTCAGGCGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GGQSAWQPSQTGRRQ*RVHSTARQPIQAWL Trigger: AAGCCACGCCTGAATGGGCTGCCTTGCTGTACTATGGACCCTTCATTGTCGTCTTCCAGTTTGGCTGGGCTGCCACGCAGATTGCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044844.9 ENSMUST00000132368.2 |
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| CDS GCA 90 bp | GCACAGCTCAGAGGGACAGGGATGCAGGCTCTGCACAGCCATGACTaGCAGTCCGTTGGCCACCTTATCCGAAAAGCTCATAGCACCATA | + |
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Preference number: 5 (lower is better) Translates to: AQLRGTGMQALHSHD*QSVGHLIRKAHSTI Trigger: TATGGTGCTATGAGCTTTTCGGATAAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCCTGCATCCCTGTCCCTCTGAGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CAA 90 bp | CAGGGCCATTCTCGGCTACAAGATATAGACTGCAGGTGGGAAAGTGCACAGAGGGACCTGTGGCCCTCCTaGGTACCCAAGTGGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QGHSRLQDIDCRWESAQRDLWPS*VPKWKS Trigger: GCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTC...CCTCTGTGCACTTTCCCACCTGCAGTCTATATCTTGTAGCCGAGAATGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 90 bp | AATGAGCCTTGTGGTCATGTACAGCATGCCTACCTGATAAAAAGCTaGCTCCCGAAGCCAGTGTTTCCACAGCAGCAGTGGCTGGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: NEPCGHVQHAYLIKS*LPKPVFPQQQWLGR Trigger: GCGGCCCAGCCACTGCTGCTGTGGAAACACTGGCTTCGGGAGCCAGCTTTTTATCAGGTAGGCATGCTGTACATGACCACAAGGCTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS-3UTR CAA 90 bp | ATAGGTCTGCTCACACTTGGGCCTTCCATGGTGCTGATGACAGGCCACCTCACGATGACTGCCAGTCCGTaGGCCACCTTATCCGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: IGLLTLGPSMVLMTGHLTMTASP*ATLSEK Trigger: CTTTTCGGATAAGGTGGCCAACGGACTGGCAGTCAT...CGTGAGGTGGCCTGTCATCAGCACCATGGAAGGCCCAAGTGTGAGCAGACCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS TCA 90 bp | AATAGGTCAGGTACATGGCAATGTAGGTCTGAGACAGGTTCACAATaGGCCTTGTGGTCATGTACAGCATGCCTACCTGATAAAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: NRSGTWQCRSETGSQ*ALWSCTACLPDKKL Trigger: CAGCTTTTTATCAGGTAGGCATGCTGTACATGACCACAAGGCTCATTGTGAACCTGTCTCAGACCTACATTGCCATGTACCTGACCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS GCA 72 bp | CCGCAGCCCAGGCACGGGCCGCTAGGTGCCAGGCCTTaGGGGGCCCACAGCGCACGCAGGAGGCGCGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: PQPRHGPLGARP*GAHSARRRRGP Trigger: CGGACCGCGCCTCCTGCGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGCGGCCCGTGCCTGGGCTGCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS GCA 72 bp | CGTGGCTTCCCCGCAGCCCAGGCACGGGCCGCTAGGTaGCAGGCCTTGCGGGGCCCACAGCGCACGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGFPAAQARAAR*QALRGPQRTQE Trigger: CTCCTGCGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGCGGCCCGTGCCTGGGCTGCGGGGAAGCCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132368.2 |
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| CDS GCA 72 bp | GCAGGACACAGACAGTGCCCGCTAGGTGCCAGGCCTTaGGGGGCCCACAGCGCACGCAGGAGGCGCGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: AGHRQCPLGARP*GAHSARRRRGP Trigger: CGGACCGCGCCTCCTGCGTGCGCTGTGGGCCCCGCAAGGCCTGGCACCTAGCGGGCACTGTCTGTGTCCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 72 bp | GTGAACCACATGCCGGCGCACAGGTCGTTGAGGAAGTaGCCGACCGCGAAGCTCAGCCGCGCGGCGAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VNHMPAHRSLRK*PTAKLSRAARD Trigger: GTCCCTCGCCGCGCGGCTGAGCTTCGCGGTCGGCCACTTCCTCAACGACCTGTGCGCCGGCATGTGGTTCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044844.9 ENSMUST00000132368.2 |
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| CDS GCA 72 bp | CACTGCAGCCCCGTACACGGCCACACCCAGATTATCTaGCAGGGCCACCCAAGCTGCGAAGGCCAGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: HCSPVHGHTQII*QGHPSCEGQDH Trigger: GTGATCCTGGCCTTCGCAGCTTGGGTGGCCCTGGCAGATAATCTGGGTGTGGCCGTGTACGGGGCTGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS GCA 72 bp | CCACAGCACAGCTCAGAGGGACAGGGATGCAGGCTCTaGACAGCCATGACTGCCAGTCCGTTGGCCACCTTA | + |
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Preference number: 6 (lower is better) Translates to: PQHSSEGQGCRL*TAMTASPLATL Trigger: TAAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCCTGCATCCCTGTCCCTCTGAGCTGTGCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 72 bp | ACAAGCAGGGCCAGGTTCCGGAACACGGGCACATCCTaGACTCCTAGCTGGTCACCCACACTGATGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSRARFRNTGTS*TPSWSPTLMSC Trigger: GCAGGACATCAGTGTGGGTGACCAGCTAGGAGTCCAGGATGTGCCCGTGTTCCGGAACCTGGCCCTGCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 72 bp | CAGTGCTGGGACCTGTGGCCCTCCTTGGTACCCAAGTaGAAGAGCAGAGAGAAGATGGCTCCCACACCCACC | + |
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Preference number: 6 (lower is better) Translates to: QCWDLWPSLVPK*KSREKMAPTPT Trigger: GGTGGGTGTGGGAGCCATCTTCTCTCTGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CAA 90 bp | TGCTCATTGGGTTCGTTCCCCCAGTGCTGGGACCTGTGGCCCTCCTaGGTACCCAAGTGGAAGAGCAGAGAGAAGATGGCTCCCACACCC | + |
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Preference number: 6 (lower is better) Translates to: CSLGSFPQCWDLWPS*VPKWKSREKMAPTP Trigger: GGGTGTGGGAGCCATCTTCTCTCTGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTGGGGGAACGAACCCAATGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 72 bp | TGCTCATTGGGTTCGTTCCCCCAGTGCTGGGACCTGTaGCCCTCCTTGGTACCCAAGTGGAAGAGCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: CSLGSFPQCWDL*PSLVPKWKSRE Trigger: CTCTCTGCTCTTCCACTTGGGTACCAAGGAGGGCCACAGGTCCCAGCACTGGGGGAACGAACCCAATGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CAA 90 bp | GAGGGACAGGGATGCAGGCTCTGCACAGCCATGACTGCCAGTCCGTaGGCCACCTTATCCGAAAAGCTCATAGCACCATACACGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: EGQGCRLCTAMTASP*ATLSEKLIAPYTKA Trigger: AGCCTTCGTGTATGGTGCTATGAGCTTTTCGGATAAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCCTGCATCCCTGTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS GCA 72 bp | AGAGGGACAGGGATGCAGGCTCTGCACAGCCATGACTaGCAGTCCGTTGGCCACCTTATCCGAAAAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RGTGMQALHSHD*QSVGHLIRKAH Trigger: ATGAGCTTTTCGGATAAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCCTGCATCCCTGTCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS TCA 72 bp | TCTGCGTGGCAGCCCAGCCAAACTGGAAGACGACAATaGAGGGTCCATAGTACAGCAAGGCAGCCCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SAWQPSQTGRRQ*RVHSTARQPIQ Trigger: CTGAATGGGCTGCCTTGCTGTACTATGGACCCTTCATTGTCGTCTTCCAGTTTGGCTGGGCTGCCACGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044844.9 ENSMUST00000132368.2 |
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| CDS CAA 72 bp | GGATGCAGGCTCTGCACAGCCATGACTGCCAGTCCGTaGGCCACCTTATCCGAAAAGCTCATAGCACCATAC | + |
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Preference number: 6 (lower is better) Translates to: GCRLCTAMTASP*ATLSEKLIAPY Trigger: GTATGGTGCTATGAGCTTTTCGGATAAGGTGGCCAACGGACTGGCAGTCATGGCTGTGCAGAGCCTGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS CCA 72 bp | TGTGGTCATGTACAGCATGCCTACCTGATAAAAAGCTaGCTCCCGAAGCCAGTGTTTCCACAGCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: CGHVQHAYLIKS*LPKPVFPQQQW Trigger: CCACTGCTGCTGTGGAAACACTGGCTTCGGGAGCCAGCTTTTTATCAGGTAGGCATGCTGTACATGACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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| CDS TCA 72 bp | GGTACATGGCAATGTAGGTCTGAGACAGGTTCACAATaGGCCTTGTGGTCATGTACAGCATGCCTACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GTWQCRSETGSQ*ALWSCTACLPD Trigger: ATCAGGTAGGCATGCTGTACATGACCACAAGGCTCATTGTGAACCTGTCTCAGACCTACATTGCCATGTACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044844.9 |
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