Pregenerated sensors for MFSD11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020818Ensembl transcript IDs: ENSMUST00000021173.14, ENSMUST00000106363.10, ENSMUST00000106365.9, ENSMUST00000136012.8, ENSMUST00000139954.9, ENSMUST00000153084.3
Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTACGAAGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCTaGCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RLRSAPGCRAARPGS*QSDCSCSAGRRGSH Trigger: GTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCGTAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR GCA 90 bp | GGGTGCCGAGCAGCACGACCGGGTTCCTGCCAAAGCGACTGTTCTTaGTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTCCAATGC | + |
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Preference number: 1 (lower is better) Translates to: GCRAARPGSCQSDCS*SAGRRGSHLKSLQC Trigger: GCATTGGAGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CCA 90 bp | GCCTTAGCAAGGGCGTCTCCTAGGAAAGCAAGGAAGCTGAGAGGCTaGAGTTGGAGCCTGCCCGGGTCTGAGGGAATGACTGTCTCCCGT | + |
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Preference number: 1 (lower is better) Translates to: ALARASPRKARKLRG*SWSLPGSEGMTVSR Trigger: ACGGGAGACAGTCATTCCCTCAGACCCGGGCAGGCTCCAACTCCAGCCTCTCAGCTTCCTTGCTTTCCTAGGAGACGCCCTTGCTAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR TCA 90 bp | GAAAGCAAGGAAGCTGAGAGGCTGGAGTTGGAGCCTGCCCGGGTCTaGGGGAATGACTGTCTCCCGTGTGAATCAGTCTGGGCTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: ESKEAERLELEPARV*GNDCLPCESVWAQI Trigger: GATTTGAGCCCAGACTGATTCACACGGGAGACAGTCATTCCCTCAGACCCGGGCAGGCTCCAACTCCAGCCTCTCAGCTTCCTTGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR CCA 90 bp | GAGGAGCCAGTCGACAGAGATTTAGGTCAGAGACTGATTGCAGGCTaGGCGGTGGTGTCCATGCTCTGCTGTTTGCAGACACCTCGACCT | + |
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Preference number: 1 (lower is better) Translates to: EEPVDRDLGQRLIAG*AVVSMLCCLQTPRP Trigger: AGGTCGAGGTGTCTGCAAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAATCAGTCTCTGACCTAAATCTCTGTCGACTGGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR TCA 90 bp | GACCCAGCAGAAAACTGCAGAGAATGGCAACTTCTTTGCTGGGCCTaGTGTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCG | + |
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Preference number: 1 (lower is better) Translates to: DPAENCREWQLLCWA*CMQCCWSLPQGQWA Trigger: CGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTCTGCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR GCA 90 bp | AGGGAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RESDLVGDGCEPPCG*WDLNSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTGACTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| 3UTR CCA 90 bp | GTTCTGGGCAGACACGAAGAAGAGTGTTCCGGGCGTCTTACTCGGTaGCTTCCATGTCCTGGTCATCGCAAGACTCTTCTTCTCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: VLGRHEEECSGRLTR*LPCPGHRKTLLLQG Trigger: TCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAGTAAGACGCCCGGAACACTCTTCTTCGTGTCTGCCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
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| 3UTR TCA 90 bp | ATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLGMVVSHHVVAGI*TLDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| 3UTR TCA 90 bp | CAGAGGAGGGGAAAGGAACCAGAATTACTCAAGACAATGAAAAGCTaGGCGCACGCTCCTGAGAGGCTACTGAGGAGCCAGTCGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: QRRGKEPELLKTMKS*AHAPERLLRSQSTE Trigger: CTCTGTCGACTGGCTCCTCAGTAGCCTCTCAGGAGCGTGCGCTCAGCTTTTCATTGTCTTGAGTAATTCTGGTTCCTTTCCCCTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR GCA 90 bp | CTCCCTGGTGACACACAGCCTCAGAGACTTTTTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACTCGGTGGCTTCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: LPGDTQPQRLFKRID*LCHVVLGRLGGFHV Trigger: GACATGGAAGCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTGTGTCACCAGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139954.9 |
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| 3UTR CCA 90 bp | GAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVGDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| 3UTR CCA 90 bp | TGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATaGCAGCAGCGTCCCACTCCACAGCGAAGAAAGAAATGGTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: CFLIKCFGSPSLGPR*QQRPTPQRRKKWFQ Trigger: TTGGAACCATTTCTTTCTTCGCTGTGGAGTGGGACGCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR TCA 90 bp | TATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTaGCACATGGCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: YFERVRHTPQPARIS*HMASQAGSFLENED Trigger: ATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGCCATGTGTCACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR TCA 90 bp | AGGGCTCAGTACGGACCCTGGAAACCTCAGCTTTCTTCTCTGGGATaGAAATGTCGCCCGCTGCCCATTACAGAATCCTTAGAACCACTG | + |
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Preference number: 1 (lower is better) Translates to: RAQYGPWKPQLSSLG*KCRPLPITESLEPL Trigger: CAGTGGTTCTAAGGATTCTGTAATGGGCAGCGGGCGACATTTTCATCCCAGAGAAGAAAGCTGAGGTTTCCAGGGTCCGTACTGAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR CCA 90 bp | CGAAGAAGAGTGTTCCGGGCGTCTTACTCGGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCTTCTCCAAGGACATTCTCAGGATCT | + |
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Preference number: 1 (lower is better) Translates to: RRRVFRASYSVASMS*SSQDSSSPRTFSGS Trigger: AGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAGTAAGACGCCCGGAACACTCTTCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
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| 3UTR CCA 90 bp | CTCAGAGACTTTTTAAACGCATCGACTGCCTTTGTCACGTTGTTCTaGGCAGACACGAAGAAGAGTGTTCCGGGCGTCTTACTCGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LRDFLNASTAFVTLF*ADTKKSVPGVLLGG Trigger: GCCACCGAGTAAGACGCCCGGAACACTCTTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
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| 3UTR TCA 90 bp | GGGACCGTCAATCCAGAGTTACCAGGGAAAGGGGGAGGCAAATGCTaGAGGTGTTCCCCAATAGCTCTTGCATTTCAGACCCAGAGAATA | + |
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Preference number: 1 (lower is better) Translates to: GTVNPELPGKGGGKC*RCSPIALAFQTQRI Trigger: TATTCTCTGGGTCTGAAATGCAAGAGCTATTGGGGAACACCTTCAGCATTTGCCTCCCCCTTTCCCTGGTAACTCTGGATTGACGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR GCA 90 bp | GCACTCAACCAGATTCTCCAGCCTCGTGAGTTCAAGGACAGCCAGTaGTACACAGAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATC | + |
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Preference number: 1 (lower is better) Translates to: ALNQILQPREFKDSQ*YTEKPCLETSCLGI Trigger: GATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAATCTGGTTGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR GCA 90 bp | CTCCCTGGTGACACACAGCCTCAGAGACTTTTTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACACGAAGAAGAGTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LPGDTQPQRLFKRID*LCHVVLGRHEEECS Trigger: GGAACACTCTTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTGTGTCACCAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
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| 3UTR GCA 90 bp | GCTCTTGCATTTCAGACCCAGAGAATACTTACTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACTCGGTGGCTTCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: ALAFQTQRILTKRID*LCHVVLGRLGGFHV Trigger: GACATGGAAGCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAGTAAGTATTCTCTGGGTCTGAAATGCAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR TCA 90 bp | TTAATCGGCAACCATTCCCTTCAGCCAGAACACTCCTCTTACCACTaGAGCCAGGAAACAGAGAGCCTAAACCTTCAGAGTAGAGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LIGNHSLQPEHSSYH*SQETESLNLQSRVH Trigger: GTGCACTCTACTCTGAAGGTTTAGGCTCTCTGTTTCCTGGCTTCAGTGGTAAGAGGAGTGTTCTGGCTGAAGGGAATGGTTGCCGATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR GCA 90 bp | TGTGTTTCAGAAAGTCATTCCCAGACCCACACATGGAGTGGCATCTaGTTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: CVSESHSQTHTWSGI*FLFRKSEAYSTASK Trigger: CTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGAATGACTTTCTGAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CCA 90 bp | CAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACATaGAGTGGCATCTGCTTCCTATTTCGAAAGAGTGAGGCATACTCC | + |
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Preference number: 1 (lower is better) Translates to: QHPCCVSESHSQTHT*SGICFLFRKSEAYS Trigger: GGAGTATGCCTCACTCTTTCGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CCA 90 bp | CTGGTCATCGCAAGACTCTTCTTCTCCAAGGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAACAGAACGGTCCCCACGAGGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: LVIARLFFSKDILRI*FPNEKEQNGPHEAY Trigger: ATAAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR TCA 90 bp | AAGACTCTTCTTCTCCAAGGACATTCTCAGGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCCCCACGAGGCTTATCACTGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KTLLLQGHSQDLVSE*ERTERSPRGLSLSE Trigger: CTCTGACAGTGATAAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR TCA 90 bp | AATTACAGGGCAGAAGTGGGAGAATCCACAAGCTTCAGGGGAGCCTaGGCTACACTCTGCAAATCAGTCTTTACAAAGTTGCTAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: NYRAEVGESTSFRGA*ATLCKSVFTKLLTC Trigger: GCAGGTTAGCAACTTTGTAAAGACTGATTTGCAGAGTGTAGCTCAGGCTCCCCTGAAGCTTGTGGATTCTCCCACTTCTGCCCTGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR TCA 90 bp | CAGGAAACAGAGAGCCTAAACCTTCAGAGTAGAGTGCACGGGACATaGATGCTCATTTCAAGTGTTCACGTTGGTGCTAGAGACACACTG | + |
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Preference number: 1 (lower is better) Translates to: QETESLNLQSRVHGT*MLISSVHVGARDTL Trigger: CAGTGTGTCTCTAGCACCAACGTGAACACTTGAAATGAGCATTCATGTCCCGTGCACTCTACTCTGAAGGTTTAGGCTCTCTGTTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR GCA 90 bp | ACCAGAGAACGCACCCCATATCAGTGGTCTTTAACTGCCTGTAAATaGAGTTCGCAGGGATCCAATCTCCATCTGACTTCTCTGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TRERTPYQWSLTACK*SSQGSNLHLTSLSS Trigger: AGAACTCAGAGAAGTCAGATGGAGATTGGATCCCTGCGAACTGCATTTACAGGCAGTTAAAGACCACTGATATGGGGTGCGTTCTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR TCA 90 bp | TTATACAACCTTATGCACACACACCACACATACACACTAAGTTGGTaGATTTTAGCCAGAGGTTGTTTGTGGCTTGGAAGAGCACAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LYNLMHTHHTYTLSW*ILARGCLWLGRAQV Trigger: AACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTGTGCATAAGGTTGTATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGAGACTGATTGCAGGCTGGGCGGTGGTGTCCATGCTCTGCTGTTTGCAGCTGAGAGGCTGGAGTTaGAGCCTGCCCGGGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GQRLIAGWAVVSMLCCLQLRGWS*SLPGSE Trigger: CTCAGACCCGGGCAGGCTCCAACTCCAGCCTCTCAG...CTGCAAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAATCAGTCTCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTAGAAGGCTACGAAGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCGCTACCGTTCACTCCTaGCAGCCCCATGCTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SSRRLRSAPGCRAARPGSATVHS*QPHARD Trigger: GTCTCTAGCATGGGGCTGTCAGGAGTGAACGGTAGC...GGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCGTAGCCTTCTACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR CAA 90 bp | AGGGTGCCGAGCAGCACGACCGGGTTCCTGCCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: RVPSSTTGFLPKRLF*LSRPKRLPPKISPM Trigger: CATTGGAGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGGAGGCAGGGGAGGGCTaGAAGTCCAAGACCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VYGPNTGTVHPREEGQLQEAGEG*KSKTSL Trigger: CAGGCTGGTCTTGGACTTGCAGCCCTCCCCTGCCTC...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGCAGCAGCAGGACAACCACAGCATaGGTCCTCCCCCTCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: VFSSNASVVRASGHDGSSRTTTA*VLPLPV Trigger: TACTGGGAGGGGGAGGACTCATGCTGTGGTTGTCCT...GCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTACCCAAATATCACCATaGCCAGGAGCTGCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: MQCCWSLPQGQWARLRACTQISP*PGAASG Trigger: TCCACTGGCAGCTCCTGGTCATGGTGATATTTGGGT...ACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | GTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATACCCAAATATCACCATaGCCAGGAGCTGCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VCNAVGPFHRGNGRVSGHTQISP*PGAASG Trigger: TCCACTGGCAGCTCCTGGTCATGGTGATATTTGGGT...ATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | GCACGACCGGGTTCCTGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCACTGTCCTTCGGTCATaGTCTGAGATCTGGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ARPGSCQSDCSCSAGRRGTVLRS*SEIWVF Trigger: GAAGACCCAGATCTCAGAGCATGACCGAAGGACAGT...GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGCAAAGCGACTGTTCTTaGTCAGCAGGCCGAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASQAGSFLENEDGGALIVQSDCS*SAGRRG Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTG...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | GCACGACCGGGTTCCTGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCATGCTCTGAGATCTaGGTCTTCCCTTGCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: ARPGSCQSDCSCSAGRRGSCSEI*VFPCHA Trigger: TGCATGGCAAGGGAAGACCCAGATCTCAGAGCATGA...GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CAA 90 bp | CAGAGAATGGCAACTTCTTTGCTGGGCCTGATGTATGCAATGCTGTaGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: QRMATSLLGLMYAML*VPSTGAMGASPGML Trigger: CAACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTGCTGCGCAGATTGACTaGACAAACTTAAAGACCGCG | + |
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Preference number: 2 (lower is better) Translates to: MQCCWSLPQGQWARLRACAAQID*TNLKTA Trigger: CGCGGTCTTTAAGTTTGTTCAGTCAATCTGCGCAGC...ACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGACCACCCAGGCATTCTaGAGACAAAGGCAGGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: ASQAGSFLENEDGGALIVTTQAF*RQRQEH Trigger: ATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGT...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | GTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VCNAVGPFHRGNGRVSGHDLVSE*ERTERS Trigger: GGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATC...ATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGGGGCGTCTTACTCGGTaGCTTCCATGTCCTGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VYGPNTGTVHPREEGQLQGRLTR*LPCPGH Trigger: ATGACCAGGACATGGAAGCCACCGAGTAAGACGCCC...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGGCTCAGTACGGACCCTaGAAACCTCAGCTTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ASQAGSFLENEDGGALIVAQYGP*KPQLSS Trigger: AGAAGAAAGCTGAGGTTTCCAGGGTCCGTACTGAGC...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR CAA 90 bp | GATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DLVGDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR-3UTR TCA 90 bp | TGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCCTTCGGTCATGCTCTaGGATCTGGGTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CQSDCSCSAGRRGSHLKSPSVML*DLGLPL Trigger: CAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGG...AGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | GTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATTGTTTTCTCATCAAATaGTTCGGTAGTCCGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VCNAVGPFHRGNGRVSGHCFLIK*FGSPSL Trigger: GAGGCTCGGACTACCGAAGCATTTGATGAGAAAACA...ATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGGTGTGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGGAGTGTCAGTCCTTGTaGGAGACAGTCTGCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AVCGSIFSPPRHSGDKGRECQSL*ETVCSA Trigger: AGCACTGCAGACTGTCTCCCACAAGGACTGACACTC...CCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACACACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPVASMS*SSQDSS Trigger: AGAAGAGTCTTGCGATGACCAGGACATGGAAGCCAC...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGCAGCAGCCTCAGCTTTCTTCTCTaGGATGAAAATGTCGCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: VFSSNASVVRASGHDGSSLSFLL*DENVAR Trigger: GCGGGCGACATTTTCATCCCAGAGAAGAAAGCTGAG...GCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATCCTTCGGTCATGCTCTaGGATCTGGGTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ETLVFSSNASVVRASGHDPSVML*DLGLPL Trigger: CAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGG...ATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGGAGACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACCCTTCGGTCATGCTCTaGGATCTGGGTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LETLVFSSNASVVRASGHPSVML*DLGLPL Trigger: CAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGG...GTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGCGTCTCCGGGCATGTTaGGAAAGATCAAGTAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VYGPNTGTVHPREEGQLQRLRAC*ERSSRR Trigger: CCTTCTACTTGATCTTTCTCAACATGCCCGGAGACG...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGCTTCTTTGCTGGGCCTaGTGTATGCAATGCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VYGPNTGTVHPREEGQLQLLCWA*CMQCCW Trigger: CCAACAGCATTGCATACATCAGGCCCAGCAAAGAAG...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATCAAAGCGACTGTTCTTaGTCAGCAGGCCGAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FFAGPDVCNAVGPFHRGNQSDCS*SAGRRG Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTG...ATTGCCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGACCACCCAGGCATTCTaGAGACAAAGGCAGGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SIFSPPRHSGDKGRSIAWTTQAF*RQRQEH Trigger: ATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGT...CCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGTGTGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PQYRYRTPQRRRSAPDLCVASMS*SSQDSS Trigger: AGAAGAGTCTTGCGATGACCAGGACATGGAAGCCAC...ACACAGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTCCAGCCTCGTGAGTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTGGGCGTCTTACTCGGTaGCTTCCATGTCCTGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ILQPREFKDSQCYTEKPCGRLTR*LPCPGH Trigger: ATGACCAGGACATGGAAGCCACCGAGTAAGACGCCC...ACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
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| 3UTR-3UTR TCA 90 bp | ACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACTGATTGTGAGGAACTaGGGGAGGGGGTGGACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TTCLSILAVFQKVIPRPTLIVRN*GRGWTN Trigger: GTTCGTCCACCCCCTCCCTCAGTTCCTCACAATCAG...TGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCCAGCCTCGTGAGTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTGCCTGGGCTACGCAGTaGGATCCTGTCTCAAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: ILQPREFKDSQCYTEKPCAWATQ*DPVSKQ Trigger: TTGTTTTGAGACAGGATCTCACTGCGTAGCCCAGGC...ACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR-3UTR TCA 90 bp | CCACGATGGCAGCAGCGTCCCACTCCACAGCGAAGAAAGAAATGGTTCCAAAAAGCCTGGGCTACGCAGTaGGATCCTGTCTCAAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: PRWQQRPTPQRRKKWFQKAWATQ*DPVSKQ Trigger: TTGTTTTGAGACAGGATCTCACTGCGTAGCCCAGGC...TTTTTGGAACCATTTCTTTCTTCGCTGTGGAGTGGGACGCTGCTGCCATCGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTCCAGGCCAGCCAAGCCCCTTGCTGGGAGTaGCAAGGTAAGACTTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FWRQRQEHCLVYKVQASQAPCWE*QGKTCS Trigger: TGAACAAGTCTTACCTTGTCACTCCCAGCAAGGGGC...TTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGTGTGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQYRYRTPQRRRSAPDLCDLVSE*ERTERS Trigger: GGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATC...ACACAGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTCCAGGCCAGCCAAACCCAAATATCACCATaGCCAGGAGCTGCCAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FWRQRQEHCLVYKVQASQTQISP*PGAASG Trigger: TCCACTGGCAGCTCCTGGTCATGGTGATATTTGGGT...TTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | AACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACAGGAAAGCAAGGAAGCTaGGAGGCTGGAGTTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: NVSQHPCCVSESHSQTHTGKQGS*EAGVGA Trigger: GGCTCCAACTCCAGCCTCTCAGCTTCCTTGCTTTCC...TGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR-3UTR TCA 90 bp | CACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTACCTGGAGGTGTAGATaGGATCCACAGTGGAGATCG | + |
|
Preference number: 2 (lower is better) Translates to: HHPGILETKAGALPGIQSTWRCR*DPQWRS Trigger: CGATCTCCACTGTGGATCTCATCTACACCTCCAGGT...ACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAACAAACTTAAAGACCGCGAAGGCCGGCGCGCTGTCTTCCGAGTAGAGAAATCATGCTCTGAGATCTaGGTCTTCCCTTGCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: LNKLKDREGRRAVFRVEKSCSEI*VFPCHA Trigger: TGCATGGCAAGGGAAGACCCAGATCTCAGAGCATGA...TTTCTCTACTCGGAAGACAGCGCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CAA 90 bp | CACAGCCTCAGAGACTTTTTAAACGCATCGACTGCCTTTGTCACGTaGTTCTGGGCAGACACGAAGAAGAGTGTTCCGGGCGTCTTACTC | + |
|
Preference number: 2 (lower is better) Translates to: HSLRDFLNASTAFVT*FWADTKKSVPGVLL Trigger: GAGTAAGACGCCCGGAACACTCTTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
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| 3UTR CAA 90 bp | CAGGCCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTaGGAGACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QAVGFNQLPCDQLCF*ETLVFSSNASVVRA Trigger: GGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGAAAGTCATTCCCAGACCCACACATGGAGTGGCATCTGCTTCCTATTTCCTGATTGTGAGGAACTaGGGGAGGGGGTGGACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FQKVIPRPTHGVASASYFLIVRN*GRGWTN Trigger: GTTCGTCCACCCCCTCCCTCAGTTCCTCACAATCAG...GAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGAATGACTTTCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGTCATCGCAAGACTCTTCTTCTCCAAGGACATTCTCAGGATCTGGTTTCCCTTCGGTCATGCTCTaGGATCTGGGTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SWSSQDSSSPRTFSGSGFPSVML*DLGLPL Trigger: CAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGG...GAAACCAGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | GACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: DTCFLIKCFGSPSLGPRWDLVSE*ERTERS Trigger: GGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATC...CCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | CCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTTGGAGACACTTGGCTGCGCAGATTGACTaGACAAACTTAAAGACCGCG | + |
|
Preference number: 2 (lower is better) Translates to: PSDLTSCHVTSCVSWRHLAAQID*TNLKTA Trigger: CGCGGTCTTTAAGTTTGTTCAGTCAATCTGCGCAGC...CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGTAGAAGGCTACGAAGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCGGTCTTCCCTTGCCATaGAAAATATATGTAGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: SSRRLRSAPGCRAARPGSGLPLP*KIYVEI Trigger: AATCTCTACATATATTTTGCATGGCAAGGGAAGACC...GGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCGTAGCCTTCTACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SHHPGILETKAGALPGIQVASMS*SSQDSS Trigger: AGAAGAGTCTTGCGATGACCAGGACATGGAAGCCAC...TTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ETLVFSSNASVVRASGHDVASMS*SSQDSS Trigger: AGAAGAGTCTTGCGATGACCAGGACATGGAAGCCAC...ATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGAACAAACTTAAAGACCGCGAAGGCCGGCGCGCTGTCTTCCGAGTAGAGAAAAGAATGCTAAGCAGCTaGGTGTTGAAGCAGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LNKLKDREGRRAVFRVEKRMLSS*VLKQLS Trigger: AGACAGCTGCTTCAACACCCAGCTGCTTAGCATTCT...TTTCTCTACTCGGAAGACAGCGCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | AGATCCACAGTGGAGATCGTATTGCTAAAGACGTGCCCACTCCCTACTAAGACATCTGGGCAGACTCGGTaGCTTCCATGTCCTGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RSTVEIVLLKTCPLPTKTSGQTR*LPCPGH Trigger: ATGACCAGGACATGGAAGCCACCGAGTCTGCCCAGA...TGTCTTAGTAGGGAGTGGGCACGTCTTTAGCAATACGATCTCCACTGTGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTAGAAACTGGCGTACCTaGAAGACTGAAAACCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HHPGILETKAGALPGIQSRNWRT*KTENPG Trigger: CCCAGGGTTTTCAGTCTTCCAGGTACGCCAGTTTCT...ACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CAA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCGCCAGCCCTaGACTGTGTATCTTAATGTAATTTTTCCAAGCAGGCACCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: KSSRVLLPTEPSRQP*TVYLNVIFPSRHQT Trigger: AGTCTGGTGCCTGCTTGGAAAAATTACATTAAGATACACAGTCAAGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGACAAATGACACAGTCTTTACCTCATTACACATAACCAGCCCCTTGCTGGGACTGATTGTGAGGAACTaGGGGAGGGGGTGGACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTNDTVFTSLHITSPLLGLIVRN*GRGWTN Trigger: GTTCGTCCACCCCCTCCCTCAGTTCCTCACAATCAG...TCCCAGCAAGGGGCTGGTTATGTGTAATGAGGTAAAGACTGTGTCATTTGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCAGATTCTCCAGCCTCGTaGGTTCAAGGACAGCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KQRVSASLLCFRKSFPDPDSPAS*VQGQPV Trigger: CACTGGCTGTCCTTGAACTCACGAGGCTGGAGAATC...TGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGCTTCTTTGCTGGGCCTaGTGTATGCAATGCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CFLFRKSEAYSTASKDLVLLCWA*CMQCCW Trigger: CCAACAGCATTGCATACATCAGGCCCAGCAAAGAAG...CACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAATGGCAACTTCTTTGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCTACTGTCCTTCGGTCATaGTCTGAGATCTGGGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QRMATSLLGLMYAMLLVPTVLRS*SEIWVF Trigger: GAAGACCCAGATCTCAGAGCATGACCGAAGGACAGT...AGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGACAGGAGGAGGAGGTAGTTaGTGTAGAAAAAGGCCACGG | + |
|
Preference number: 2 (lower is better) Translates to: FLFRKSEAYSTASKDLVTGGGGS*CRKRPR Trigger: CCGTGGCCTTTTTCTACAGCAACTACCTCCTCCTCC...TGTCACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTCTCGAAACAAGTTGCCTGACCCACACATGGAGTaGCATCTGCTTCCTATTTCG | + |
|
Preference number: 2 (lower is better) Translates to: VQGQPVLHRETLSRNKLPDPHME*HLLPIS Trigger: CGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTC...AGGCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCGACCCACACATGGAGTaGCATCTGCTTCCTATTTCG | + |
|
Preference number: 2 (lower is better) Translates to: NLFTAPIQVPYTPEKKVSDPHME*HLLPIS Trigger: CGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTC...GCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGTCCCAGACCCACACATaGAGTGGCATCTGCTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KFVYGPNTGTVHPREEGQSQTHT*SGICFL Trigger: TAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGA...CTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACAACCACCCAGGCATTCTaGAGACAAAGGCAGGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TTCLSILAVFQKVIPRPTTTQAF*RQRQEH Trigger: ATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGT...TGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGATCTGGTTTCCGAATGAGAAAGAACAGAACGGTCCCCACGAGGCTTATCACTCATGCTCTGAGATCTaGGTCTTCCCTTGCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: RIWFPNEKEQNGPHEAYHSCSEI*VFPCHA Trigger: TGCATGGCAAGGGAAGACCCAGATCTCAGAGCATGA...GTGATAAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPDILRI*FPNEKE Trigger: TTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTC...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATAGAATGCTAAGCAGCTaGGTGTTGAAGCAGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ETLVFSSNASVVRASGHDRMLSS*VLKQLS Trigger: AGACAGCTGCTTCAACACCCAGCTGCTTAGCATTCT...ATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | CATAACCAGCCCCTTGCTGGGAGTGACAAGGTAAGACTTGTTCAACAAAGCATTGCCCCTTGCTGGGAGTaGCAAGGTAAGACTTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HNQPLAGSDKVRLVQQSIAPCWE*QGKTCS Trigger: TGAACAAGTCTTACCTTGTCACTCCCAGCAAGGGGC...AATGCTTTGTTGAACAAGTCTTACCTTGTCACTCCCAGCAAGGGGCTGGTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAAGGACAACCACAGCATaGGTCCTCCCCCTCCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: FSEFCRQNVYTDKPQANTRTTTA*VLPLPV Trigger: TACTGGGAGGGGGAGGACTCATGCTGTGGTTGTCCT...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGAGGTTGTTTGTGGCTTGGAAGAGCACAAGTTGGAGGCCAAGCTGCAGTATCTCTCCAATGCCGATaGAAATTCCAGAAAGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ARGCLWLGRAQVGGQAAVSLQCR*KFQKVQ Trigger: TTGGACTTTCTGGAATTTTCATCGGCATTGGAGAGA...TACTGCAGCTTGGCCTCCAACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGAGGTTGTTTGTGGCTTGGAAGAGCACAAGTTGGAGGCCAAGCTGCAGTAGTGTCTCAGCATCCTTaGTGTGTTTCAGAAAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ARGCLWLGRAQVGGQAAVVSQHP*CVSESH Trigger: ATGACTTTCTGAAACACAGCAAGGATGCTGAGACAC...TACTGCAGCTTGGCCTCCAACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTCCAAGTGTCTCAGCATCCTTaGTGTGTTTCAGAAAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SDCSCSAGRRGSHLKSLQVSQHP*CVSESH Trigger: ATGACTTTCTGAAACACAGCAAGGATGCTGAGACAC...TTGGAGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAATGGCAACTTCTTTGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCTCAAAGGCAGGAGCATTaGCTGGTATACAAAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRMATSLLGLMYAMLLVPQRQEH*LVYKVQ Trigger: CTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTG...AGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTTTCAAGGACAGCCAGTaGTACACAGAGAAACCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CGSIFSPPRHSGDKGRSIFKDSQ*YTEKPC Trigger: ACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAA...AATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGAGAATGCTAAGCAGCTaGGTGTTGAAGCAGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CFLFRKSEAYSTASKDLVRMLSS*VLKQLS Trigger: AGACAGCTGCTTCAACACCCAGCTGCTTAGCATTCT...CACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 90 bp | CACACACCACACATACACACTAAGTTGGTGAATTTTAGCCAGAGGTaGTTTGTGGCTTGGAAGAGCACAAGTTGGAGGCCAAGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: HTPHIHTKLVNFSQR*FVAWKSTSWRPSCS Trigger: ACTGCAGCTTGGCCTCCAACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGACACAAAGGCAGGAGCATTaGCTGGTATACAAAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLFRKSEAYSTASKDLVTQRQEH*LVYKVQ Trigger: CTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTG...TGTCACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | CATAACCAGCCCCTTGCTGGGAGTGACAAGGTAAGACTTGTTCAACAAAGCATTGACCCACACATGGAGTaGCATCTGCTTCCTATTTCG | + |
|
Preference number: 2 (lower is better) Translates to: HNQPLAGSDKVRLVQQSIDPHME*HLLPIS Trigger: CGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTC...AATGCTTTGTTGAACAAGTCTTACCTTGTCACTCCCAGCAAGGGGCTGGTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTTCCCAGACCCACACATaGAGTGGCATCTGCTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: EKPCLETSCLGISSQEESSQTHT*SGICFL Trigger: TAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGA...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGTGTAAGGAGAACAATTaGACAGACTTAGCTGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: VYGPNTGTVHPREEGQLQCKENN*TDLAGF Trigger: AAATCCAGCTAAGTCTGTCCAATTGTTCTCCTTACA...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR CAA 90 bp | TCTGGCCCAGGGTATACTGGGAGTTACTATGTAGTCCAAGATAACTaGGAACAAGTCAATCTCCCTGTCACTGTCCCGAGTGTTAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SGPGYTGSYYVVQDN*EQVNLPVTVPSVRI Trigger: AATCCTAACACTCGGGACAGTGACAGGGAGATTGACTTGTTCCAAGTTATCTTGGACTACATAGTAACTCCCAGTATACCCTGGGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGTGTCTCAGCATCCTTaGTGTGTTTCAGAAAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: CGSIFSPPRHSGDKGRSIVSQHP*CVSESH Trigger: ATGACTTTCTGAAACACAGCAAGGATGCTGAGACAC...AATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SHHPGILETKAGALPGIQDILRI*FPNEKE Trigger: TTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTC...TTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAACATTTTAGGAGAAGTTaGAGTCTCAGCGGTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TEKPCLETSCLGISSQEEHFRRS*SLSGVW Trigger: CCACACACCGCTGAGACTTCAACTTCTCCTAAAATG...TTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTCAAAGGCAGGAGCATTaGCTGGTATACAAAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EKPCLETSCLGISSQEESQRQEH*LVYKVQ Trigger: CTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTG...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | CCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTTGGAGACACTTGGGTCTTCCCTTGCCATaGAAAATATATGTAGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: PSDLTSCHVTSCVSWRHLGLPLP*KIYVEI Trigger: AATCTCTACATATATTTTGCATGGCAAGGGAAGACC...CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACATTCCCCAATAGCTCTTaGATTTCAGACCCAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TTCLSILAVFQKVIPRPTFPNSS*ISDPEN Trigger: ATTCTCTGGGTCTGAAATGCAAGAGCTATTGGGGAA...TGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTCCAGGCCAGCCAAATTTATAACTATGACTaGATCCCTCAAACACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FWRQRQEHCLVYKVQASQIYNYD*IPQTQA Trigger: TGCCTGTGTTTGAGGGATGCAGTCATAGTTATAAAT...TTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACACGAAACAAGTTGCCTTaGTATCTCTTCACAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NVSQHPCCVSESHSQTHTRNKLP*YLFTRG Trigger: TCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCG...TGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAATGGCAACTTCTTTGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCTGGTCTTCCCTTGCCATaGAAAATATATGTAGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QRMATSLLGLMYAMLLVPGLPLP*KIYVEI Trigger: AATCTCTACATATATTTTGCATGGCAAGGGAAGACC...AGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCTTGGTATCTCTTCACAAGAGGAAAGTAACTAAGACACCAGAGAACGCATGTTTTCTCATCAAATaGTTCGGTAGTCCGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VALVSLHKRKVTKTPENACFLIK*FGSPSL Trigger: GAGGCTCGGACTACCGAAGCATTTGATGAGAAAACA...TGCGTTCTCTGGTGTCTTAGTTACTTTCCTCTTGTGAAGAGATACCAAGGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: FSEFCRQNVYTDKPQANTENCRE*QLLCWA Trigger: GGCCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
||
| 3UTR CAA 90 bp | GCAGTTATACAACCTTATGCACACACACCACACATACACACTAAGTaGGTGAATTTTAGCCAGAGGTTGTTTGTGGCTTGGAAGAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: AVIQPYAHTPHIHTK*VNFSQRLFVAWKST Trigger: TGTGCTCTTCCAAGCCACAAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTGTGCATAAGGTTGTATAACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGACAAATGACACAGTCTTTACCTCATTACACATAACCAGCCCCTTGCTGGGATCTCTCCAATGCCGATaGAAATTCCAGAAAGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LTNDTVFTSLHITSPLLGSLQCR*KFQKVQ Trigger: TTGGACTTTCTGGAATTTTCATCGGCATTGGAGAGA...TCCCAGCAAGGGGCTGGTTATGTGTAATGAGGTAAAGACTGTGTCATTTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCTTGGTATCTCTTCACAAGAGGAAAGTAACTAAGACACCAGAGAACGCAGTGTCTCAGCATCCTTaGTGTGTTTCAGAAAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VALVSLHKRKVTKTPENAVSQHP*CVSESH Trigger: ATGACTTTCTGAAACACAGCAAGGATGCTGAGACAC...TGCGTTCTCTGGTGTCTTAGTTACTTTCCTCTTGTGAAGAGATACCAAGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGGTCTTCCCTTGCCATaGAAAATATATGTAGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QICLRPQYRYRTPQRRRSGLPLP*KIYVEI Trigger: AATCTCTACATATATTTTGCATGGCAAGGGAAGACC...TGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCCTTGGTATCTCTTCACAAGAGGAAAGTAACTAAGACACCAGAGAACGCATACACACTAAGTTGGTaGATTTTAGCCAGAGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VALVSLHKRKVTKTPENAYTLSW*ILARGC Trigger: ACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTA...TGCGTTCTCTGGTGTCTTAGTTACTTTCCTCTTGTGAAGAGATACCAAGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACATTAACTGCCTGTAAATaGAGTTCGCAGGGATCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: FSEFCRQNVYTDKPQANTLTACK*SSQGSN Trigger: ATTGGATCCCTGCGAACTGCATTTACAGGCAGTTAA...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TEKPCLETSCLGISSQEEDILRI*FPNEKE Trigger: TTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTC...TTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGACAAATGACACAGTCTTTACCTCATTACACATAACCAGCCCCTTGCTGGGAACCAGCTGTGTTTCTTaGAGACACTTGTTTTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LTNDTVFTSLHITSPLLGTSCVS*RHLFSH Trigger: ATGAGAAAACAAGTGTCTCCAAGAAACACAGCTGGT...TCCCAGCAAGGGGCTGGTTATGTGTAATGAGGTAAAGACTGTGTCATTTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | AGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCTaGCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SAPGCRAARPGS*QSDCSCSAGRR Trigger: TCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | TTGCAGGCTGGGCGGTGGTGTCCATGCTCTGCTGTTTaGAGACACCTCGACCTCTGCCTCAGCACCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQAGRWCPCSAV*RHLDLCLSTWR Trigger: CCTCCAGGTGCTGAGGCAGAGGTCGAGGTGTCTGCAAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACGACCGGGTTCCTGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCACGCATCGACTGCCTTaGTCACGTTGTTCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARPGSCQSDCSCSAGRRGTHRLP*SRCSGQ Trigger: CTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGT...GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GAAGCTGAGAGGCTGGAGTTGGAGCCTGCCCGGGTCTaGGGGAATGACTGTCTCCCGTGTGAATCAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EAERLELEPARV*GNDCLPCESVW Trigger: CCAGACTGATTCACACGGGAGACAGTCATTCCCTCAGACCCGGGCAGGCTCCAACTCCAGCCTCTCAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | AGACTGATTGCAGGCTGGGCGGTGGTGTCCATGCTCTaGTGTTTGCAGACACCTCGACCTCTGCCTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLIAGWAVVSML*CLQTPRPLPQH Trigger: GTGCTGAGGCAGAGGTCGAGGTGTCTGCAAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAATCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTCTACTGACTGGCTGGTaGACCTTGGGTAGACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: MQCCWSLPQGQWARLRACLLTGW*TLGRPS Trigger: GGAAGGTCTACCCAAGGTCAACCAGCCAGTCAGTAG...ACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | GCAGCACGACCGGGTTCCTGCCAAAGCGACTGTTCTTaGTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: AARPGSCQSDCS*SAGRRGSHLKS Trigger: AGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | GAAAGATCAAGTAGAAGGCTACGAAGTGCACCAGGGTaGCGAGCAGCACGACCGGGTTCCTGCCAAAGCGAC | + |
|
Preference number: 3 (lower is better) Translates to: ERSSRRLRSAPG*RAARPGSCQSD Trigger: GTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCGTAGCCTTCTACTTGATCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGCAGCAGCCTAAGCAGCTGGGTGTaGAAGCAGCTGTCTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VFSSNASVVRASGHDGSSLSSWV*KQLSPR Trigger: TCTGGGAGACAGCTGCTTCAACACCCAGCTGCTTAG...GCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATACAGTGGAGATCGTATaGCTAAAGACGTGCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VCNAVGPFHRGNGRVSGHTVEIV*LKTCPL Trigger: GAGTGGGCACGTCTTTAGCAATACGATCTCCACTGT...ATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR TCA 72 bp | ACACATGGCGAGCCAGGCTGGATCGTTCCTCGAGAATaGGGATGGAGGAGCCCTGATTGTGAGGAACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: THGEPGWIVPRE*GWRSPDCEELR Trigger: CCTCAGTTCCTCACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGCCATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR GCA 72 bp | ACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTaGCTGGTATACAAAGTCCAGGCCAGCCAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TTQAFWRQRQEH*LVYKVQASQGC Trigger: GCAGCCTTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | ATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATaGCAGCAGCGTCCCACTCCACAGCGAAGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKCFGSPSLGPR*QQRPTPQRRKK Trigger: TTTCTTTCTTCGCTGTGGAGTGGGACGCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGCAGCAGCGTCCCACTCGTGTCTCAGCATCCTaGCTGTGTTTCAGAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKCFGSPSLGPRWQQRPTRVSAS*LCFRKS Trigger: TGACTTTCTGAAACACAGCAAGGATGCTGAGACACG...AGTGGGACGCTGCTGCCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTCGTGTCTCAGCATCCTaGCTGTGTTTCAGAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MQCCWSLPQGQWARLRACRVSAS*LCFRKS Trigger: TGACTTTCTGAAACACAGCAAGGATGCTGAGACACG...ACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACGCATCGACTGCCTTaGTCACGTTGTTCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VYGPNTGTVHPREEGQLQTHRLP*SRCSGQ Trigger: CTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGT...CTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTCCAACCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SDCSCSAGRRGSHLKSLQPKRLF*LSRPKR Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGG...TTGGAGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | AGGGCTGCAAGTCCAAGACCAGCCTGGGCTACGCAGTaGGATCCTGTCTCAAAACAACGTGTCTCAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: RAASPRPAWATQ*DPVSKQRVSAS Trigger: GGATGCTGAGACACGTTGTTTTGAGACAGGATCTCACTGCGTAGCCCAGGCTGGTCTTGGACTTGCAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | CTTCCACAGGGGCAATGGGCGCGTCTCCGGGCATGTTaGGAAAGATCAAGTAGAAGGCTACGAAGTGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LPQGQWARLRAC*ERSSRRLRSAP Trigger: TGGTGCACTTCGTAGCCTTCTACTTGATCTTTCTCAACATGCCCGGAGACGCGCCCATTGCCCCTGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | GGAGCCAGTCGACAGAGATTTAGGTCAGAGACTGATTaGAGGCTGGGCGGTGGTGTCCATGCTCTGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GASRQRFRSETD*RLGGGVHALLF Trigger: AAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAATCAGTCTCTGACCTAAATCTCTGTCGACTGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTACTGCCTTTGTCACGTaGTTCTGGGCAGACTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CQSDCSCSAGRRGSHLKSTAFVT*FWADSV Trigger: CACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGT...AGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GTAGTTGCTGTAGAAAAAGGCCACGGCTGCGCAGATTaGCTGAACAAACTTAAAGACCGCGAAGGCCGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VVAVEKGHGCAD*LNKLKDREGRR Trigger: GCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAGTCAATCTGCGCAGCCGTGGCCTTTTTCTACAGCAACTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | GCAGAGAATGGCAACTTCTTTGCTGGGCCTGATGTATaGAATGCTGTTGGTCCCTTCCACAGGGGCAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: AENGNFFAGPDV*NAVGPFHRGNG Trigger: CCCATTGCCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | CCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTaGTATACAAAGTCCAGGCCAGCCAAGGCTGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: PRHSGDKGRSIA*YTKSRPAKAAY Trigger: ATATGCAGCCTTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | CTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVGDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR CCA 72 bp | GTGTTCCGGGCGTCTTACTCGGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCTTCTCCAAGGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: VFRASYSVASMS*SSQDSSSPRTF Trigger: GAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAGTAAGACGCCCGGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR CCA 72 bp | GTCGACAGAGATTTAGGTCAGAGACTGATTGCAGGCTaGGCGGTGGTGTCCATGCTCTGCTGTTTGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VDRDLGQRLIAG*AVVSMLCCLQT Trigger: TGTCTGCAAACAGCAGAGCATGGACACCACCGCCCAGCCTGCAATCAGTCTCTGACCTAAATCTCTGTCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGTCGAAACAAGTTGCCTaGGTATCTCTTCACAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASQAGSFLENEDGGALIVSKQVA*VSLHKR Trigger: CCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGA...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCGGGTTCCTGCCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCAGATCTGGGTCTTCCCTaGCCATGCAAAATATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TGFLPKRLFLLSRPKRLPDLGLP*PCKIYV Trigger: TACATATATTTTGCATGGCAAGGGAAGACCCAGATC...TGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGACGCATCGACTGCCTTaGTCACGTTGTTCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPPRHSGDKGRSIAWYTKTHRLP*SRCSGQ Trigger: CTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGT...CTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTCCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CGSIFSPPRHSGDKGRSIPKRLF*LSRPKR Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGG...AATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACAAACTTAAAGACCGCGAAGGCCGGCGCGCTGTCTTCCGAGTAGAGAAAATGTATGCAATGCTGTaGGTCCCTTCCACAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNKLKDREGRRAVFRVEKMYAML*VPSTGA Trigger: TGCCCCTGTGGAAGGGACCAACAGCATTGCATACAT...TTTCTCTACTCGGAAGACAGCGCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | GATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVGDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR GCA 72 bp | GACACACAGCCTCAGAGACTTTTTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACTCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DTQPQRLFKRID*LCHVVLGRLGG Trigger: GCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | AGACACGAAGAAGAGTGTTCCGGGCGTCTTACTCGGTaGCTTCCATGTCCTGGTCATCGCAAGACTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RHEEECSGRLTR*LPCPGHRKTLL Trigger: AAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAGTAAGACGCCCGGAACACTCTTCTTCGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR CCA 72 bp | ACGTTGTTCTGGGCAGACTCGGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCTTCTCCAAGGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: TLFWADSVASMS*SSQDSSSPRTF Trigger: GAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAGTCTGCCCAGAACAACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | AGACGTGCCCACTCCCTACTAAGACAGGTCTCACTCTaGCCCAGGGTATACTGGGAGTTACTATGTAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RRAHSLLRQVSL*PRVYWELLCSP Trigger: TGGACTACATAGTAACTCCCAGTATACCCTGGGCCAGAGTGAGACCTGTCTTAGTAGGGAGTGGGCACGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGGTGTGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGCGTGTCTCAGCATCCTaGCTGTGTTTCAGAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVCGSIFSPPRHSGDKGRRVSAS*LCFRKS Trigger: TGACTTTCTGAAACACAGCAAGGATGCTGAGACACG...CCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACACACCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGGTTTTAAATCCAGTGTaGGGCAATAACCCCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: ASQAGSFLENEDGGALIVVLNPV*GNNPNT Trigger: AGTGTTGGGGTTATTGCCCAACACTGGATTTAAAAC...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGACGCATCGACTGCCTTaGTCACGTTGTTCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQICLRPQYRYRTPQRRRTHRLP*SRCSGQ Trigger: CTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGT...CCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGATCTGGGTCTTCCCTaGCCATGCAAAATATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPDLGLP*PCKIYV Trigger: TACATATATTTTGCATGGCAAGGGAAGACCCAGATC...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGACTGCCTTTGTCACGTaGTTCTGGGCAGACACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQICLRPQYRYRTPQRRRTAFVT*FWADTK Trigger: CTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGT...CCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | GAAAACTGCAGAGAATGGCAACTTCTTTGCTGGGCCTaGTGTATGCAATGCTGTTGGTCCCTTCCACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ENCREWQLLCWA*CMQCCWSLPQG Trigger: CCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GGAAAGGAACCAGAATTACTCAAGACAATGAAAAGCTaGGCGCACGCTCCTGAGAGGCTACTGAGGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKEPELLKTMKS*AHAPERLLRSQ Trigger: CTGGCTCCTCAGTAGCCTCTCAGGAGCGTGCGCTCAGCTTTTCATTGTCTTGAGTAATTCTGGTTCCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | CAGATTCTCCAGCCTCGTGAGTTCAAGGACAGCCAGTaGTACACAGAGAAACCCTGTCTCGAAACAAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QILQPREFKDSQ*YTEKPCLETSC Trigger: GCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR GCA 72 bp | ATGAGATCCACAGTGGAGATCGTATTGCTAAAGACGTaGCCACTCCCTACTAAGACAGGTCTCACTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MRSTVEIVLLKT*PLPTKTGLTLA Trigger: GGCCAGAGTGAGACCTGTCTTAGTAGGGAGTGGGCACGTCTTTAGCAATACGATCTCCACTGTGGATCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CCA 72 bp | CTCAGTACGGACCCTGGAAACCTCAGCTTTCTTCTCTaGGATGAAAATGTCGCCCGCTGCCCATTACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSTDPGNLSFLL*DENVARCPLQN Trigger: ATTCTGTAATGGGCAGCGGGCGACATTTTCATCCCAGAGAAGAAAGCTGAGGTTTCCAGGGTCCGTACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAACCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TEKPCLETSCLGISSQEEPKRLF*LSRPKR Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGG...TTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | TTTAATCCCAGCACTCAACCAGATTCTCCAGCCTCGTaGGTTCAAGGACAGCCAGTGCTACACAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: FNPSTQPDSPAS*VQGQPVLHRET Trigger: GGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAATCTGGTTGAGTGCTGGGATTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | AATCCAGAGTTACCAGGGAAAGGGGGAGGCAAATGCTaGAGGTGTTCCCCAATAGCTCTTGCATTTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: NPELPGKGGGKC*RCSPIALAFQT Trigger: GGTCTGAAATGCAAGAGCTATTGGGGAACACCTTCAGCATTTGCCTCCCCCTTTCCCTGGTAACTCTGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR TCA 72 bp | TACGGACCCTGGAAACCTCAGCTTTCTTCTCTGGGATaGAAATGTCGCCCGCTGCCCATTACAGAATCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YGPWKPQLSSLG*KCRPLPITESL Trigger: TAAGGATTCTGTAATGGGCAGCGGGCGACATTTTCATCCCAGAGAAGAAAGCTGAGGTTTCCAGGGTCCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | GATTATGAGACTGACAGGCCGTCGGATTTAACCAGCTaGCATGTGACCAGCTGTGTTTCTTGGAGACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: DYETDRPSDLTS*HVTSCVSWRHL Trigger: CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGGCCTGTCAGTCTCATAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR GCA 72 bp | TTTCAGACCCAGAGAATACTTACTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACTCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FQTQRILTKRID*LCHVVLGRLGG Trigger: GCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAGTAAGTATTCTCTGGGTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CCA 72 bp | AGCCAGAGGTTGTTTGTGGCTTGGAAGAGCACAAGTTaGAGGCCAAGCTGCAGTACATACATGTTAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQRLFVAWKSTS*RPSCSTYMLDL Trigger: CAGGTCTAACATGTATGTACTGCAGCTTGGCCTCCAACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | CTTCTCCAAGGACATTCTCAGGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCCCCACGAGGCTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LLQGHSQDLVSE*ERTERSPRGLS Trigger: TGATAAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GCAGAAGTGGGAGAATCCACAAGCTTCAGGGGAGCCTaGGCTACACTCTGCAAATCAGTCTTTACAAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AEVGESTSFRGA*ATLCKSVFTKL Trigger: CAACTTTGTAAAGACTGATTTGCAGAGTGTAGCTCAGGCTCCCCTGAAGCTTGTGGATTCTCCCACTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR TCA 72 bp | ATTACTCAAGACAATGAAAAGCTGAGCGCACGCTCCTaGGAGGCTACTGAGGAGCCAGTCGACAGAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: ITQDNEKLSARS*EATEEPVDRDL Trigger: TAAATCTCTGTCGACTGGCTCCTCAGTAGCCTCTCAGGAGCGTGCGCTCAGCTTTTCATTGTCTTGAGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR TCA 72 bp | AACCATTCCCTTCAGCCAGAACACTCCTCTTACCACTaGAGCCAGGAAACAGAGAGCCTAAACCTTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NHSLQPEHSSYH*SQETESLNLQS Trigger: ACTCTGAAGGTTTAGGCTCTCTGTTTCCTGGCTTCAGTGGTAAGAGGAGTGTTCTGGCTGAAGGGAATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | CGCACCCCATATCAGTGGTCTTTAACTGCCTGTAAATaGAGTTCGCAGGGATCCAATCTCCATCTGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RTPYQWSLTACK*SSQGSNLHLTS Trigger: AGAAGTCAGATGGAGATTGGATCCCTGCGAACTGCATTTACAGGCAGTTAAAGACCACTGATATGGGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR GCA 72 bp | GACACACAGCCTCAGAGACTTTTTAAACGCATCGACTaGCTTTGTCACGTTGTTCTGGGCAGACACGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DTQPQRLFKRID*LCHVVLGRHEE Trigger: TTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR GCA 72 bp | ACTGTGCAAAGGCAGCGAGAAACCTTACTTATAGAATaGTTGCTCTCAGGAGCAGCTTGGGTTTTCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: TVQRQRETLLIE*LLSGAAWVFPP Trigger: AGGTGGGAAAACCCAAGCTGCTCCTGAGAGCAAGCATTCTATAAGTAAGGTTTCTCGCTGCCTTTGCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | TTCCCCATCTCCACCTCACTGATAACATTTCCTCCATaGGCCCAGTACTGTTCGGTTACTTGTAAACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FPISTSLITFPP*AQYCSVTCKQL Trigger: GAGCTGTTTACAAGTAACCGAACAGTACTGGGCGCATGGAGGAAATGTTATCAGTGAGGTGGAGATGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CCA 72 bp | GCAAGACTCTTCTTCTCCAAGGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAACAGAACGGTCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ARLFFSKDILRI*FPNEKEQNGPH Trigger: GTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | TTTTTAAACGCATCGACTGCCTTTGTCACGTTGTTCTaGGCAGACACGAAGAAGAGTGTTCCGGGCGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FLNASTAFVTLF*ADTKKSVPGVL Trigger: TAAGACGCCCGGAACACTCTTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTCATCGCAAGACTCTTCTTCTCCAAGGACATTCTCAGGATCTGGTTTCCGCGCTGTTTCTCCCGATaGTGTGCTCATCAGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LVIARLFFSKDILRIWFPRCFSR*CAHQNL Trigger: TAAATTCTGATGAGCACACAATCGGGAGAAACAGCG...CGGAAACCAGATCCTGAGAATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCAAGAATGGCAACTTCTTaGCTGGGCCTGATGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KQRVSASLLCFRKSFPDPRMATS*LGLMYA Trigger: TGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCT...TGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGGCTTATCACTGTCAGAGCAATAAACACTGTCCTTCGGTCATGCTCTGAGCGCTGTTTCTCCCGATaGTGTGCTCATCAGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TRLITVRAINTVLRSCSERCFSR*CAHQNL Trigger: TAAATTCTGATGAGCACACAATCGGGAGAAACAGCG...CTCAGAGCATGACCGAAGGACAGTGTTTATTGCTCTGACAGTGATAAGCCTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR TCA 72 bp | GAGAGCCTAAACCTTCAGAGTAGAGTGCACGGGACATaGATGCTCATTTCAAGTGTTCACGTTGGTGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ESLNLQSRVHGT*MLISSVHVGAR Trigger: TCTAGCACCAACGTGAACACTTGAAATGAGCATTCATGTCCCGTGCACTCTACTCTGAAGGTTTAGGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR GCA 72 bp | GAGATCCTGTCTCAAAACAACGTGTCTCAGCATCCTTaGTGTGTTTCAGAAAGTCATTCCCAGACCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: EILSQNNVSQHP*CVSESHSQTHT Trigger: TGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGTTTTGAGACAGGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | TGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACATaGAGTGGCATCTGCTTCCTATTTCGAAAGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CCVSESHSQTHT*SGICFLFRKSE Trigger: CTCACTCTTTCGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CCA 72 bp | AAGTTGGTGAATTTTAGCCAGAGGTTGTTTGTGGCTTaGAAGAGCACAAGTTGGAGGCCAAGCTGCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KLVNFSQRLFVA*KSTSWRPSCST Trigger: TGTACTGCAGCTTGGCCTCCAACTTGTGCTCTTCCAAGCCACAAACAACCTCTGGCTAAAATTCACCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGACAAATGACACAGTCTTTACCTCATTACACATAACCAGCCCCTTGCTGGGATTAGCCAGAGGTTGTTaGTGGCTTGGAAGAGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTNDTVFTSLHITSPLLGLARGC*WLGRAQ Trigger: TTGTGCTCTTCCAAGCCACAAACAACCTCTGGCTAA...TCCCAGCAAGGGGCTGGTTATGTGTAATGAGGTAAAGACTGTGTCATTTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGATCTGGGTCTTCCCTaGCCATGCAAAATATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: QICLRPQYRYRTPQRRRSDLGLP*PCKIYV Trigger: TACATATATTTTGCATGGCAAGGGAAGACCCAGATC...TGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGAGGAAAGTAACTAAGACACCAGAGAACGCACCCCATATCAGTGGTCTTGTTTTAAATCCAGTGTaGGGCAATAACCCCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: HKRKVTKTPENAPHISGLVLNPV*GNNPNT Trigger: AGTGTTGGGGTTATTGCCCAACACTGGATTTAAAAC...AAGACCACTGATATGGGGTGCGTTCTCTGGTGTCTTAGTTACTTTCCTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCAAGGACATTCTCAGGATCTGGTTTCCGAATGAGAAAGAACAGAACGGTCGCTGTTTCTCCCGATaGTGTGCTCATCAGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSKDILRIWFPNEKEQNGRCFSR*CAHQNL Trigger: TAAATTCTGATGAGCACACAATCGGGAGAAACAGCG...ACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAAATTTTAGCCAGAGGTaGTTTGTGGCTTGGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FSEFCRQNVYTDKPQANTNFSQR*FVAWKS Trigger: GCTCTTCCAAGCCACAAACAACCTCTGGCTAAAATT...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | CTTATGCACACACACCACACATACACACTAAGTTGGTaGATTTTAGCCAGAGGTTGTTTGTGGCTTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LMHTHHTYTLSW*ILARGCLWLGR Trigger: TCTTCCAAGCCACAAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTGTGCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| 3UTR TCA 72 bp | TTTCCTTCTCTAAATATGCTTTTATTAGTTGACAAATaGCACAGTCTTTACCTCATTACACATAACCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FPSLNMLLLVDK*HSLYLITHNQP Trigger: GGGCTGGTTATGTGTAATGAGGTAAAGACTGTGTCATTTGTCAACTAATAAAAGCATATTTAGAGAAGGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 |
||
| CDS-3UTR GCA 90 bp | CGAAGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCTGCCAAAGCGACTGTTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSAPGCRAARPGSCQSDCSDEDR*CVEGPW Trigger: CCATGGTCCTTCTACACAGCATCTGTCTTCATCGGA...ACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | AGCAGCACGACCGGGTTCCTGCCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSTTGFLPKRLF*LSRPKRLPPKI Trigger: GATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGGCAGGAACCCGGTCGTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | CACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATaGCCTGGTATACAAAGTCCAGGCCAGCCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HHPGILETKAGA*PGIQSPGQPRL Trigger: CAGCCTTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | GGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGAAGAAGGTCAGCTCCAGACCTGTGTAGGCAGTCGTGACGCTCAGGAGCGACCACGGACGGAGTaGTCAAATTTGAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PREEGQLQTCVGSRDAQERPRTE*SNLKQR Trigger: TCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCG...CTCCTGAGCGTCACGACTGCCTACACAGGTCTGGAGCTGACCTTCTTCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTCACACATTCCTTAGGCGGGCAGAGCTACCGTTCACTCCTGACAGCCCCAACAAACATAGAGATCTaGGGTCCAACAATGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ALTHSLGGQSYRSLLTAPTNIEI*GPTMAT Trigger: GGTCGCCATTGTTGGACCTCAGATCTCTATGTTTGT...TGGGGCTGTCAGGAGTGAACGGTAGCTCTGCCCGCCTAAGGAATGTGTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGTAGAAGGCTACGAAGTGCACCAGGGTGCCGAGCAGCACGACCGGGTTCCTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRRLRSAPGCRAARPGSSDEDR*CVEGPW Trigger: CCATGGTCCTTCTACACAGCATCTGTCTTCATCGGA...GGAACCCGGTCGTGCTGCTCGGCACCCTGGTGCACTTCGTAGCCTTCTACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | GCTCAAATCCATCTCAGCCACCTACTGACTGGCTGGTaGACCTTGGGTAGACCTTCCCGACAGCCGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQIHLSHLLTGW*TLGRPSRQPVF Trigger: GAAAACCGGCTGTCGGGAAGGTCTACCCAAGGTCAACCAGCCAGTCAGTAGGTGGCTGAGATGGATTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| CDS-3UTR TCA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTCGACCACGGACGGAGTaGTCAAATTTGAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPRPRTE*SNLKQR Trigger: TCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCG...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGACAAACATAGAGATCTaGGGTCCAACAATGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASQAGSFLENEDGGALIVTNIEI*GPTMAT Trigger: GGTCGCCATTGTTGGACCTCAGATCTCTATGTTTGT...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | CCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTTGGAGACACTTGCCTTCGGTCATGCTCTaGGATCTGGGTCTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSDLTSCHVTSCVSWRHLPSVML*DLGLPL Trigger: CAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGG...CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | GAGACTGACAGGCCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTACCCAAATATCACCATaGCCAGGAGCTGCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETDRPSDLTSCHVTSCVSTQISP*PGAASG Trigger: TCCACTGGCAGCTCCTGGTCATGGTGATATTTGGGT...AGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGGCCTGTCAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR GCA 90 bp | TCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGCAAAGCGACTGTTCTTaGTCAGCAGGCCGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPRHSGDKGRSIAWYTKQSDCS*SAGRRG Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTG...CTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR CAA 72 bp | GTCTTCAGACACTCTAGAAGAGGGAGTCAGATCTTGTaGGGGATGGTTGTGAGCCACCATGTGGTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRHSRRGSQIL*GMVVSHHVVAG Trigger: CCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTGACTCCCTCTTCTAGAGTGTCTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTCGGAGTGATCAAATTTaGAGCAGAGAACACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPRSDQI*SREHAI Trigger: TATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCG...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GAGACTGACAGGCCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTCGACCACGGACGGAGTaGTCAAATTTGAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETDRPSDLTSCHVTSCVSRPRTE*SNLKQR Trigger: TCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCG...AGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGGCCTGTCAGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGTGTTCCGGGCGTCTTACTCGGTGGCTTCCATGTCCTGGTCATCGCAACTCCTGATGACAGTTTaGGCCACATTTCCACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRVFRASYSVASMSWSSQLLMTV*ATFPQV Trigger: GACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...TTGCGATGACCAGGACATGGAAGCCACCGAGTAAGACGCCCGGAACACTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGCCCTCACACATTCCTTAGGCGGGCAGAGCTACCGTTCACTCCTGACAGCTGGTATATCCACTaGCATGAAAATCTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSPHTFLRRAELPFTPDSWYIH*HENLCY Trigger: ATAGCACAGATTTTCATGGCAGTGGATATACCAGCT...GTCAGGAGTGAACGGTAGCTCTGCCCGCCTAAGGAATGTGTGAGGGCTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGTCTGGGCAGACTCGGTaGCTTCCATGTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLFRKSEAYSTASKDLVSGQTR*LPCPGH Trigger: ATGACCAGGACATGGAAGCCACCGAGTCTGCCCAGA...CACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACACGACCACGGACGGAGTaGTCAAATTTGAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPPRHSGDKGRSIAWYTRPRTE*SNLKQR Trigger: TCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCG...TGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTCCAGGCCAGCCAACAGCGGCAATTCCGATaGAGACAGATGCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FWRQRQEHCLVYKVQASQQRQFR*RQMLCR Trigger: TCTACACAGCATCTGTCTTCATCGGAATTGCCGCTG...TTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGTCCAGGCCAGCCAACGTCTCCGGGCATGTTaGGAAAGATCAAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FWRQRQEHCLVYKVQASQRLRAC*ERSSRR Trigger: CCTTCTACTTGATCTTTCTCAACATGCCCGGAGACG...TTGGCTGGCCTGGACTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | TCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAACTTCTTTGCTGGGCCTaGTGTATGCAATGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHPGILETKAGALPGIQLLCWA*CMQCCW Trigger: CCAACAGCATTGCATACATCAGGCCCAGCAAAGAAG...TTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR GCA 90 bp | AGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIFSPPRHSGDKGRSIAWLLMTV*ATFPQV Trigger: GACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...CCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | GCGAGCCAGGCTGGATCGTTCCTCGAGAATGAGGATGGAGGAGCCCTGATTGTGAGCTGGTATATCCACTaGCATGAAAATCTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQAGSFLENEDGGALIVSWYIH*HENLCY Trigger: ATAGCACAGATTTTCATGGCAGTGGATATACCAGCT...CACAATCAGGGCTCCTCCATCCTCATTCTCGAGGAACGATCCAGCCTGGCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | GCTGTCTTCAGACACTCTAGAAGAGGGAGTCAGATCTaGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHSRRGSQI*LGMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTGACTCCCTCTTCTAGAGTGTCTGAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR CAA 72 bp | GAATACTTACTAAACGCATCGACTGCCTTTGTCACGTaGTTCTGGGCAGACTCGGTGGCTTCCATGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EYLLNASTAFVT*FWADSVASMSW Trigger: CCAGGACATGGAAGCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAGTAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CAA 72 bp | AGAGACTTTTTAAACGCATCGACTGCCTTTGTCACGTaGTTCTGGGCAGACTCGGTGGCTTCCATGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDFLNASTAFVT*FWADSVASMSW Trigger: CCAGGACATGGAAGCCACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | AGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTCCAACGGAGTGATCAAATTTaGAGCAGAGAACACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SDCSCSAGRRGSHLKSLQRSDQI*SREHAI Trigger: TATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCG...TTGGAGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | CTGAACAAACTTAAAGACCGCGAAGGCCGGCGCGCTGTCTTCCGAGTAGAGAAACGGAGTGATCAAATTTaGAGCAGAGAACACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LNKLKDREGRRAVFRVEKRSDQI*SREHAI Trigger: TATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCG...TTTCTCTACTCGGAAGACAGCGCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTCTCGAAACAAGTTGCCTCAGCGGCAATTCCGATaGAGACAGATGCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQGQPVLHRETLSRNKLPQRQFR*RQMLCR Trigger: TCTACACAGCATCTGTCTTCATCGGAATTGCCGCTG...AGGCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| CDS-3UTR GCA 90 bp | CCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTTGGAGACACTTGCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDLTSCHVTSCVSWRHLLLMTV*ATFPQV Trigger: GACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | AATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCCAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLFTAPIQVPYTPEKKVSQAISL*CPKDSS Trigger: GCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTG...GCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| 3UTR CAA 72 bp | AGAGACTTTTTAAACGCATCGACTGCCTTTGTCACGTaGTTCTGGGCAGACACGAAGAAGAGTGTTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDFLNASTAFVT*FWADTKKSVPG Trigger: GCCCGGAACACTCTTCTTCGTGTCTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 |
||
| 3UTR CAA 72 bp | AGACCCAGCAGAAAACTGCAGAGAATGGCAACTTCTTaGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSRKLQRMATS*LGLMYAMLLVP Trigger: AGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTCTGCTGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCGACTGTTCTTGCTCAGCAGGCCGAAGAGGCTCCCACCTAAAATCTCTACATTTCCACAAGTCTaGAAGGCGGTGAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKRLFLLSRPKRLPPKISTFPQV*KAVNIN Trigger: GTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGT...AGAGATTTTAGGTGGGAGCCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACACGGAGTGATCAAATTTaGAGCAGAGAACACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FSPPRHSGDKGRSIAWYTRSDQI*SREHAI Trigger: TATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCG...TGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGGATCTGGTTTCCGAATGAGAAAGAACAGAACGGTCCCCACGAGGCTTACAAACATAGAGATCTaGGGTCCAACAATGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSGFRMRKNRTVPTRLTNIEI*GPTMAT Trigger: GGTCGCCATTGTTGGACCTCAGATCTCTATGTTTGT...AAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | AGGATCTGGTTTCCGAATGAGAAAGAACAGAACGGTCCCCACGAGGCTTATCACACAAACATAGAGATCTaGGGTCCAACAATGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: RIWFPNEKEQNGPHEAYHTNIEI*GPTMAT Trigger: GGTCGCCATTGTTGGACCTCAGATCTCTATGTTTGT...GTGATAAGCCTCGTGGGGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GCAATAAACACTGTCCTTCGGTCATGCTCTGAGATCTGGGTCTTCCCTTGCCATACAAACATAGAGATCTaGGGTCCAACAATGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: AINTVLRSCSEIWVFPCHTNIEI*GPTMAT Trigger: GGTCGCCATTGTTGGACCTCAGATCTCTATGTTTGT...ATGGCAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGGACAGTGTTTATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | ACGAGGCTTATCACTGTCAGAGCAATAAACACTGTCCTTCGGTCATGCTCTGAGCAGCGGCAATTCCGATaGAGACAGATGCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLITVRAINTVLRSCSEQRQFR*RQMLCR Trigger: TCTACACAGCATCTGTCTTCATCGGAATTGCCGCTG...CTCAGAGCATGACCGAAGGACAGTGTTTATTGCTCTGACAGTGATAAGCCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQICLRPQYRYRTPQRRRSDEDR*CVEGPW Trigger: CCATGGTCCTTCTACACAGCATCTGTCTTCATCGGA...CCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCACAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QICLRPQYRYRTPQRRRSQAISL*CPKDSS Trigger: GCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTG...TGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTTCGGTCATGCTCTGAGATCTGGGTCTTCCCTTGCCATGCAAAATATCAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLRSCSEIWVFPCHAKYQAISL*CPKDSS Trigger: GCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTG...ATATTTTGCATGGCAAGGGAAGACCCAGATCTCAGAGCATGACCGAAGGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTCTGTCCCAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCCAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFCPKFVYGPNTGTVHPQAISL*CPKDSS Trigger: GCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTG...GGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTGGGACAGAAGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | AAACAACGTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCAGGAGGAGGAGGTAGTTaGTGTAGAAAAAGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRVSASLLCFRKSFPDPGGGGS*CRKRPR Trigger: CCGTGGCCTTTTTCTACAGCAACTACCTCCTCCTCC...TGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACACGTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CCA 90 bp | CGTGAGTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTCTCGAAACAAGTAGAATGCTAAGCAGCTaGGTGTTGAAGCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REFKDSQCYTEKPCLETSRMLSS*VLKQLS Trigger: AGACAGCTGCTTCAACACCCAGCTGCTTAGCATTCT...ACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR CAA 72 bp | TGCACGGGACATGAATGCTCATTTCAAGTGTTCACGTaGGTGCTAGAGACACACTGTCCTCCCTGTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGHECSFQVFT*VLETHCPPCVF Trigger: AAAGACACAGGGAGGACAGTGTGTCTCTAGCACCAACGTGAACACTTGAAATGAGCATTCATGTCCCGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| CDS-3UTR TCA 90 bp | CTCGGTGGCTTCCATGTCCTGGTCATCGCAAGACTCTTCTTCTCCAAGGACATTACATTTCCACAAGTCTaGAAGGCGGTGAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGFHVLVIARLFFSKDITFPQV*KAVNIN Trigger: GTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGT...AATGTCCTTGGAGAAGAAGAGTCTTGCGATGACCAGGACATGGAAGCCACCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCACTCCTGATGACAGTTTaGGCCACATTTCCACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QICLRPQYRYRTPQRRRSLLMTV*ATFPQV Trigger: GACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...TGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACAAACTTAAAGACCGCGAAGGCCGGCGCGCTGTCTTCCGAGTAGAGAAAAGCTGGTATATCCACTaGCATGAAAATCTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNKLKDREGRRAVFRVEKSWYIH*HENLCY Trigger: ATAGCACAGATTTTCATGGCAGTGGATATACCAGCT...TTTCTCTACTCGGAAGACAGCGCGCCGGCCTTCGCGGTCTTTAAGTTTGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTGGCACGCCATAAATAATTaGCAAGCTGGTATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRESDLVGDGCEPPCGCWHAINN*QAGIST Trigger: AGTGGATATACCAGCTTGGCAATTATTTATGGCGTG...CCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTGACTCCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR GCA 90 bp | GACACTTGTTTTCTCATCAAATGCTTCGGTAGTCCGAGCCTCGGGCCACGATGGCACGCCATAAATAATTaGCAAGCTGGTATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DTCFLIKCFGSPSLGPRWHAINN*QAGIST Trigger: AGTGGATATACCAGCTTGGCAATTATTTATGGCGTG...CCATCGTGGCCCGAGGCTCGGACTACCGAAGCATTTGATGAGAAAACAAGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | AGACACTCTAGAAGAGGGAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATACATTTCCACAAGTCTaGAAGGCGGTGAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RHSRRGSQILLGMVVSHHTFPQV*KAVNIN Trigger: GTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGT...ATGGTGGCTCACAACCATCCCCAACAAGATCTGACTCCCTCTTCTAGAGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | TGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTACATTTCCACAAGTCTaGAAGGCGGTGAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CGSIFSPPRHSGDKGRSITFPQV*KAVNIN Trigger: GTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGT...AATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTGCTGCGCAGATTGACTaGACAAACTTAAAGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKPCLETSCLGISSQEESAAQID*TNLKTA Trigger: CGCGGTCTTTAAGTTTGTTCAGTCAATCTGCGCAGC...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR GCA 90 bp | TCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGCTGGTATATCCACTaGCATGAAAATCTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHHPGILETKAGALPGIQSWYIH*HENLCY Trigger: ATAGCACAGATTTTCATGGCAGTGGATATACCAGCT...TTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | CAGAACGGTCCCCACGAGGCTTATCACTGTCAGAGCAATAAACACTGTCCTTCGCACGCCATAAATAATTaGCAAGCTGGTATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QNGPHEAYHCQSNKHCPSHAINN*QAGIST Trigger: AGTGGATATACCAGCTTGGCAATTATTTATGGCGTG...CGAAGGACAGTGTTTATTGCTCTGACAGTGATAAGCCTCGTGGGGACCGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | GACTTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACTGTCCTTCGGTCATaGTCTGAGATCTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFSEFCRQNVYTDKPQANTVLRS*SEIWVF Trigger: GAAGACCCAGATCTCAGAGCATGACCGAAGGACAGT...GTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAATCATGCTCTGAGATCTaGGTCTTCCCTTGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEKPCLETSCLGISSQEESCSEI*VFPCHA Trigger: TGCATGGCAAGGGAAGACCCAGATCTCAGAGCATGA...TTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR TCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTGATCTGGTTTCCGAATaGGAAAGAACAGAACGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPCLETSCLGISSQEESDLVSE*ERTERS Trigger: GGACCGTTCTGTTCTTTCTCATTCGGAAACCAGATC...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCCAAGGACATTCTCAGGATCTGGTTTCCGAATGAGAAAGAACAGAACGGTCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKDILRIWFPNEKEQNGLLMTV*ATFPQV Trigger: GACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...ACCGTTCTGTTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTCCTTGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | AATTTGTTTACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCAGCTGGTATATCCACTaGCATGAAAATCTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLFTAPIQVPYTPEKKVSSWYIH*HENLCY Trigger: ATAGCACAGATTTTCATGGCAGTGGATATACCAGCT...GCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGTAAACAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EKPCLETSCLGISSQEESSDEDR*CVEGPW Trigger: CCATGGTCCTTCTACACAGCATCTGTCTTCATCGGA...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSSVGRMYIQTSHRQTQAISL*CPKDSS Trigger: GCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTG...TGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCTCAGCATCCTTGCTGTGTTTCAGAAAGTCATTCCCAGACCCACACATGGTTTCTCCCGATTGTGTaGTCATCAGAATTTATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQHPCCVSESHSQTHTWFLPIV*SSEFIV Trigger: GACGATAAATTCTGATGAGCACACAATCGGGAGAAA...CCATGTGTGGGTCTGGGAATGACTTTCTGAAACACAGCAAGGATGCTGAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAGTGGCTTCCATGTCCTaGTCATCGCAAGACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSEFCRQNVYTDKPQANTVASMS*SSQDSS Trigger: AGAAGAGTCTTGCGATGACCAGGACATGGAAGCCAC...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CCA 90 bp | GACTTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFSEFCRQNVYTDKPQANENCRE*QLLCWA Trigger: GGCCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...GTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| 3UTR CAA 72 bp | GTGGATCATCTGGTAGACAGGTTCCTAGACTATAAATaGGAAAGCCAGACCTCCAGTGACCTCATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDHLVDRFLDYK*ESQTSSDLILA Trigger: TGCCAAAATGAGGTCACTGGAGGTCTGGCTTTCCAATTTATAGTCTAGGAACCTGTCTACCAGATGATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| 3UTR CAA 72 bp | GGGTATACTGGGAGTTACTATGTAGTCCAAGATAACTaGGAACAAGTCAATCTCCCTGTCACTGTCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYTGSYYVVQDN*EQVNLPVTVPS Trigger: ACTCGGGACAGTGACAGGGAGATTGACTTGTTCCAAGTTATCTTGGACTACATAGTAACTCCCAGTATACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136012.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGAGGAAAGTAACTAAGACACCAGAGAACGCACCCCATATCAGTGGTCTTACATTTCCACAAGTCTaGAAGGCGGTGAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKRKVTKTPENAPHISGLTFPQV*KAVNIN Trigger: GTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGT...AAGACCACTGATATGGGGTGCGTTCTCTGGTGTCTTAGTTACTTTCCTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAACCCTGTCTCGAAACAAGTTGCCTTGGTATCTCTTCACAAGAGGAAAGTCGGAGTGATCAAATTTaGAGCAGAGAACACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EKPCLETSCLGISSQEESRSDQI*SREHAI Trigger: TATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCG...ACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGTACATCGACACAAAACAAAGAAATAGTGGACACTTTAATCCCAGCACTCCAGCGGCAATTCCGATaGAGACAGATGCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGTSTQNKEIVDTLIPALQRQFR*RQMLCR Trigger: TCTACACAGCATCTGTCTTCATCGGAATTGCCGCTG...GAGTGCTGGGATTAAAGTGTCCACTATTTCTTTGTTTTGTGTCGATGTACCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGGTCTTCCCTTGCCATaGAAAATATATGTAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: CGSIFSPPRHSGDKGRSIGLPLP*KIYVEI Trigger: AATCTCTACATATATTTTGCATGGCAAGGGAAGACC...AATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR GCA 90 bp | CATAACCAGCCCCTTGCTGGGAGTGACAAGGTAAGACTTGTTCAACAAAGCATTCACGCCATAAATAATTaGCAAGCTGGTATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HNQPLAGSDKVRLVQQSIHAINN*QAGIST Trigger: AGTGGATATACCAGCTTGGCAATTATTTATGGCGTG...AATGCTTTGTTGAACAAGTCTTACCTTGTCACTCCCAGCAAGGGGCTGGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
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| 3UTR CAA 72 bp | GCTACACAGAGAAACCCTGTCTCGAAACAAGTTGCCTaGGTATCTCTTCACAAGAGGAAAGTAACTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATQRNPVSKQVA*VSLHKRKVTKT Trigger: TGTCTTAGTTACTTTCCTCTTGTGAAGAGATACCAAGGCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| CDS-3UTR TCA 90 bp | GCACACACACCACACATACACACTAAGTTGGTGAATTTTAGCCAGAGGTTGTTTTCTCTCCAATGCCGATaGAAATTCCAGAAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AHTPHIHTKLVNFSQRLFSLQCR*KFQKVQ Trigger: TTGGACTTTCTGGAATTTTCATCGGCATTGGAGAGA...AAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR CCA 90 bp | TCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACATTGTGTAGAAGGACCATaGGAAAGGCTGGATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSVGRMYIQTSHRQTHCVEGP*ERLDKN Trigger: GTTTTTATCCAGCCTTTCCCATGGTCCTTCTACACA...ATGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR CCA 90 bp | ACAAAACAAAGAAATAGTGGACACTTTAATCCCAGCACTCAACCAGATTCTCCAGACCATGGGAAAGGCTaGATAAAAACGGCAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TKQRNSGHFNPSTQPDSPDHGKG*IKTAMY Trigger: GTACATTGCCGTTTTTATCCAGCCTTTCCCATGGTC...TGGAGAATCTGGTTGAGTGCTGGGATTAAAGTGTCCACTATTTCTTTGTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR CCA 90 bp | CAAGGTACATCGACACAAAACAAAGAAATAGTGGACACTTTAATCCCAGCACTCGACATTCTCAGGATCTaGTTTCCGAATGAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGTSTQNKEIVDTLIPALDILRI*FPNEKE Trigger: TTCTTTCTCATTCGGAAACCAGATCCTGAGAATGTC...GAGTGCTGGGATTAAAGTGTCCACTATTTCTTTGTTTTGTGTCGATGTACCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR CAA 90 bp | ACGGCCCCAATACAGGTACCGTACACCCCAGAGAAGAAGGTCAGCTCCAGACCTGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TAPIQVPYTPEKKVSSRPAPDDS*RHISTS Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...AGGTCTGGAGCTGACCTTCTTCTCTGGGGTGTACGGTACCTGTATTGGGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCAGCCTCGTGAGTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTCCAAAGCGACTGTTCTaGCTCAGCAGGCCGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILQPREFKDSQCYTEKPCPKRLF*LSRPKR Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAGTCGCTTTGG...ACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAACTCACGAGGCTGGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | AGCATATTCTCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGCTAAGCAGCTGGGTGTaGAAGCAGCTGTCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIFSPPRHSGDKGRSIAWLSSWV*KQLSPR Trigger: TCTGGGAGACAGCTGCTTCAACACCCAGCTGCTTAG...CCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGAGAATATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCTGGGCCTGATGTATGCAATGCTGTTGGTCCCTTCCACAGGGGCAATGGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGLMYAMLLVPSTGAMAPDDS*RHISTS Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...CATTGCCCCTGTGGAAGGGACCAACAGCATTGCATACATCAGGCCCAGCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR CAA 90 bp | TCACCACCCAGGCATTCTGGAGACAAAGGCAGGAGCATTGCCTGGTATACAAAGCGTCAGGCAATTTCCTaGTGCTGTCCAAAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPRHSGDKGRSIAWYTKRQAIS*CCPKDS Trigger: GCTGTCCTTTGGACAGCACAAGGAAATTGCCTGACG...CTTTGTATACCAGGCAATGCTCCTGCCTTTGTCTCCAGAATGCCTGGGTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAAGGACAGCCAGTGCTACACAGAGAAACCCTGTCTCGAAACAAGTTGCCTACTGCCTTTGTCACGTaGTTCTGGGCAGACTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGQPVLHRETLSRNKLPTAFVT*FWADSV Trigger: CACCGAGTCTGCCCAGAACAACGTGACAAAGGCAGT...AGGCAACTTGTTTCGAGACAGGGTTTCTCTGTGTAGCACTGGCTGTCCTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | CCGTCGGATTTAACCAGCTGCCATGTGACCAGCTGTGTTTCTTGGAGACACTTGGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSDLTSCHVTSCVSWRHLAPDDS*RHISTS Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...CAAGTGTCTCCAAGAAACACAGCTGGTCACATGGCAGCTGGTTAAATCCGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS-3UTR CAA 90 bp | CCACGATGGCAGCAGCGTCCCACTCCACAGCGAAGAAAGAAATGGTTCCAAAAAGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRWQQRPTPQRRKKWFQKAPDDS*RHISTS Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...TTTTTGGAACCATTTCTTTCTTCGCTGTGGAGTGGGACGCTGCTGCCATCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 |
||
| CDS GCA 90 bp | TGTCCTTCGGTCATGCTCAGCAGCGGCAATTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGGGAAAGGCTGGATAAAAACGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPSVMLSSGNSDEDR*CVEGPWERLDKNGN Trigger: ATTGCCGTTTTTATCCAGCCTTTCCCATGGTCCTTCTACACAGCATCTGTCTTCATCGGAATTGCCGCTGCTGAGCATGACCGAAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153084.3 |
||
| CDS GCA 90 bp | CCCGATTGTGTGCTCATCAGAATTTATCGTCAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGCGGCAATTCCGATGAAGACAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PDCVLIRIYRQAISL*CPKDSSGNSDEDRC Trigger: GCATCTGTCTTCATCGGAATTGCCGCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTGACGATAAATTCTGATGAGCACACAATCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | ACACACAGCCTCAGAGACTTTTTAAACGCATCGACTGCCTTTGTCACGTTGTTCCGTCAGGCAATTTCCTaGTGCTGTCCAAAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: THSLRDFLNASTAFVTLFRQAIS*CCPKDS Trigger: GCTGTCCTTTGGACAGCACAAGGAAATTGCCTGACG...GAACAACGTGACAAAGGCAGTCGATGCGTTTAAAAAGTCTCTGAGGCTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106363.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGACCCACACATGGAGTGGCATCTGCTTCCTATTTCGAAAGAGTGAGGCATCGCTGTTTCTCCCGATaGTGTGCTCATCAGAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRPTHGVASASYFERVRHRCFSR*CAHQNL Trigger: TAAATTCTGATGAGCACACAATCGGGAGAAACAGCG...ATGCCTCACTCTTTCGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCTATTTCGAAAGAGTGAGGCATACTCCACAGCCAGCAAGGATCTCGTGAGAATGGCAACTTCTTaGCTGGGCCTGATGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLFRKSEAYSTASKDLVRMATS*LGLMYA Trigger: TGCATACATCAGGCCCAGCAAAGAAGTTGCCATTCT...CACGAGATCCTTGCTGGCTGTGGAGTATGCCTCACTCTTTCGAAATAGGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGACCCACACATGGAGTGGCATCTGCTTCCTATTTCGAAAGAGTGAGGCATGATCTGGGTCTTCCCTaGCCATGCAAAATATATGTA | + |
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Preference number: 5 (lower is better) Translates to: PRPTHGVASASYFERVRHDLGLP*PCKIYV Trigger: TACATATATTTTGCATGGCAAGGGAAGACCCAGATC...ATGCCTCACTCTTTCGAAATAGGAAGCAGATGCCACTCCATGTGTGGGTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS-3UTR CAA 90 bp | GCACACACACCACACATACACACTAAGTTGGTGAATTTTAGCCAGAGGTTGTTTACGCATCGACTGCCTTaGTCACGTTGTTCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: AHTPHIHTKLVNFSQRLFTHRLP*SRCSGQ Trigger: CTGCCCAGAACAACGTGACAAAGGCAGTCGATGCGT...AAACAACCTCTGGCTAAAATTCACCAACTTAGTGTGTATGTGTGGTGTGTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS TCA 90 bp | GATCTGAGGTCCAACAATGGCGACCACGGACGGAGTGATCAAATTTaGAGCAGAGAACACGCCATAAATAATTGCCAAGCTGGTATATCC | + |
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Preference number: 5 (lower is better) Translates to: DLRSNNGDHGRSDQI*SREHAINNCQAGIS Trigger: GGATATACCAGCTTGGCAATTATTTATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCGCCATTGTTGGACCTCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 ENSMUST00000153084.3 |
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| CDS CCA 90 bp | AGCAGCGGCAATTCCGATGAAGACAGATGCTGTGTAGAAGGACCATaGGAAAGGCTGGATAAAAACGGCAATGTACATGCTGTAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: SSGNSDEDRCCVEGP*ERLDKNGNVHAVKQ Trigger: TTGTTTTACAGCATGTACATTGCCGTTTTTATCCAGCCTTTCCCATGGTCCTTCTACACAGCATCTGTCTTCATCGGAATTGCCGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000153084.3 |
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| CDS-3UTR CAA 90 bp | TTCTCTGAGTTCTGTAGGCAGAATGTATATACAGACAAGCCACAGGCAAACACAGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT | + |
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Preference number: 5 (lower is better) Translates to: FSEFCRQNVYTDKPQANTAPDDS*RHISTS Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...TGTGTTTGCCTGTGGCTTGTCTGTATATACATTCTGCCTACAGAACTCAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021173.14 ENSMUST00000106365.9 |
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| CDS-3UTR CAA 90 bp | ACAAGAAAGCTAGGCGAATACATCCGTCAAGGTACATCGACACAAAACAAAGAAATGTATGCAATGCTGTaGGTCCCTTCCACAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TRKLGEYIRQGTSTQNKEMYAML*VPSTGA Trigger: TGCCCCTGTGGAAGGGACCAACAGCATTGCATACAT...TTCTTTGTTTTGTGTCGATGTACCTTGACGGATGTATTCGCCTAGCTTTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS TCA 72 bp | CTGTCCTTCGGTCATGCTCAGCAGCGGCAATTCCGATaGAGACAGATGCTGTGTAGAAGGACCATGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSFGHAQQRQFR*RQMLCRRTMGK Trigger: CTTTCCCATGGTCCTTCTACACAGCATCTGTCTTCATCGGAATTGCCGCTGCTGAGCATGACCGAAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153084.3 |
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| CDS GCA 72 bp | GTCATGCTCAGCAGCGGCAATTCCGATGAAGACAGATaGTGTGTAGAAGGACCATGGGAAAGGCTGGATAAA | + |
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Preference number: 6 (lower is better) Translates to: VMLSSGNSDEDR*CVEGPWERLDK Trigger: TTTATCCAGCCTTTCCCATGGTCCTTCTACACAGCATCTGTCTTCATCGGAATTGCCGCTGCTGAGCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153084.3 |
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| CDS GCA 72 bp | ATCACTGTCAGAGCAATAAACACTGTCCTTCGGTCATaGTCAGCAGCGGCAATTCCGATGAAGACAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: ITVRAINTVLRS*SAAAIPMKTDA Trigger: AGCATCTGTCTTCATCGGAATTGCCGCTGCTGAGCATGACCGAAGGACAGTGTTTATTGCTCTGACAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153084.3 |
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| CDS GCA 72 bp | GTGCTCATCAGAATTTATCGTCAGGCAATTTCCTTGTaGTGTCCAAAGGACAGCAGCGGCAATTCCGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VLIRIYRQAISL*CPKDSSGNSDE Trigger: TTCATCGGAATTGCCGCTGCTGTCCTTTGGACAGCACAAGGAAATTGCCTGACGATAAATTCTGATGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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| CDS TCA 72 bp | CTCCTGATGACAGTTTGCGCCACATTTCCACAAGTCTaGAAGGCGGTGAACATAAACATAAAGGCAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLMTVCATFPQV*KAVNINIKATP Trigger: AGGAGTTGCCTTTATGTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 ENSMUST00000153084.3 |
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| CDS TCA 72 bp | TCCAACAATGGCGACCACGGACGGAGTGATCAAATTTaGAGCAGAGAACACGCCATAAATAATTGCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SNNGDHGRSDQI*SREHAINNCQA Trigger: AGCTTGGCAATTATTTATGGCGTGTTCTCTGCTTCAAATTTGATCACTCCGTCCGTGGTCGCCATTGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021173.14 ENSMUST00000106363.10 ENSMUST00000106365.9 ENSMUST00000136012.8 ENSMUST00000139954.9 ENSMUST00000153084.3 |
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| CDS GCA 72 bp | AGTGCCCAGAAAATTCCGCTGTTTCTCCCGATTGTGTaGTCATCAGAATTTATCGTCAGGCAATTTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SAQKIPLFLPIV*SSEFIVRQFPC Trigger: ACAAGGAAATTGCCTGACGATAAATTCTGATGAGCACACAATCGGGAGAAACAGCGGAATTTTCTGGGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021173.14 |
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