Pregenerated sensors for MFSD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001082Ensembl transcript IDs: ENSMUST00000001109.11, ENSMUST00000114329.8, ENSMUST00000114331.10, ENSMUST00000126257.6, ENSMUST00000134156.8, ENSMUST00000137150.8, ENSMUST00000137506.6, ENSMUST00000149657.5, ENSMUST00000155577.8, ENSMUST00000201147.2, ENSMUST00000202065.2, ENSMUST00000202378.4
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTaGGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RGEPPWARWEECARS*VVWAQVPTWQPDSW Trigger: CCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR CCA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTaGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: ASLPGPGGRSVLGAE*SGPRFPPGSQTAGV Trigger: AACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR CCA 90 bp | GAGGCCGATGAAGAAAAACATCTTGCCCTGCTGCAGGCTAGGAGGTaGAGGGTGAGCGCCCAGCCCCCTAGGCCACCAACTGCCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: EADEEKHLALLQARR*RVSAQPPRPPTAWG Trigger: CCCCCAGGCAGTTGGTGGCCTAGGGGGCTGGGCGCTCACCCTCCACCTCCTAGCCTGCAGCAGGGCAAGATGTTTTTCTTCATCGGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR GCA 90 bp | TTTGGAGTAAGAAAAGGGTGTAGCTGCCCAGGCTTCCTGCTGGGTTaGCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: FGVRKGCSCPGFLLG*HPERGGAWRASLGP Trigger: CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGAAGCCTGGGCAGCTACACCCTTTTCTTACTCCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
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| 3UTR CCA 90 bp | TGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTaGCAGCTCAGCTACTCCTCCTTGGAAGTCTCTGCTGGATGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: WAQVPTWQPDSWGWV*QLSYSSLEVSAGCF Trigger: GAAGCATCCAGCAGAGACTTCCAAGGAGGAGTAGCTGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR TCA 90 bp | GAAGGCTACCCCGATGACTGCCATGCCTTGGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: EGYPDDCHALAAGWR*AQVSDNGCGEVNVP Trigger: GGGAACGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR CCA 90 bp | AGAGTAAAGGCCAAGGAGAAGGCTACCCCGATGACTGCCATGCCTTaGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGGCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: RVKAKEKATPMTAMP*LRVGGEPRSATMAV Trigger: CACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGCCTTCTCCTTGGCCTTTACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR GCA 90 bp | GCTGAGCAGGTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAGTGTCTCTGGCAAGAAACAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: AEQVGSSVEAQGDRR*PLFLGQCLWQETED Trigger: ATCTTCTGTTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCTGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR CCA 90 bp | ACCAGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTGGACCTaGGGTCTGAGAACCTCGAAGCCACTAATATGGAGACCTACCTGC | + |
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Preference number: 1 (lower is better) Translates to: TSQSAGRGTTKASWT*GLRTSKPLIWRPTC Trigger: GCAGGTAGGTCTCCATATTAGTGGCTTCGAGGTTCTCAGACCCCAGGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CCA 90 bp | AAGGCCACCAGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTaGACCTGGGGTCTGAGAACCTCGAAGCCACTAATATGGAGACCT | + |
|
Preference number: 1 (lower is better) Translates to: KATSQSAGRGTTKAS*TWGLRTSKPLIWRP Trigger: AGGTCTCCATATTAGTGGCTTCGAGGTTCTCAGACCCCAGGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCTGGTGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR TCA 90 bp | CTCGAAGCCACTAATATGGAGACCTACCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCCTGAGAACAGG | + |
|
Preference number: 1 (lower is better) Translates to: LEATNMETYLLNWKR*CARKLSVYSRPENR Trigger: CCTGTTCTCAGGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGGTAGGTCTCCATATTAGTGGCTTCGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CCA 90 bp | GCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAGAAACAGAAGATGAACAACATGTCG | + |
|
Preference number: 1 (lower is better) Translates to: AAVWKPRVTEDARFS*GSVSGKKQKMNNMS Trigger: CGACATGTTGTTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTTGGCAGCCAGACAGCTaGGGTTGGGTGTGGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RRGVASLPGPGGRSVLGAWQPDS*GWVWQL Trigger: GAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCA...AGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCGCCCAGGTTCCCACCTaGCAGCCAGACAGCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SCWVAIQREEGRGEPPWAAQVPT*QPDSWG Trigger: ACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGC...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGAGTGTGCTAGGAGCTaGGTGGTCTGGGCCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLGCHPERGGAWRASLGPECARS*VVWAQV Trigger: AACCTGGGCCCAGACCACTCAGCTCCTAGCACACTC...CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTCCTCCCTGGGCCCGGTaGGAGGAGTGTGCTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCPPWAR*EECARS Trigger: GCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGG...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCATGGCAGCCAGACAGCTaGGGTTGGGTGTGGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPWQPDS*GWVWQL Trigger: GAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCA...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGCCCAGGTTCCCACCTaGCAGCCAGACAGCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCAQVPT*QPDSWG Trigger: ACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGC...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACCCCGATGACTGCCATGCCTTGGCTGCGGGTTGGAGGTGAGCCCAGGTCATGGCAGCCAGACAGCTaGGGTTGGGTGTGGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ATPMTAMPWLRVGGEPRSWQPDS*GWVWQL Trigger: GAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCA...TGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR CAA 90 bp | AGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTaGGGTGTGGCAGCTCAGCTACTCCTCCTTGGAAGTCTCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SGLGPGSHLAARQLG*GVAAQLLLLGSLCW Trigger: CCAGCAGAGACTTCCAAGGAGGAGTAGCTGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGCTGCCATGCCTTGGCTaGGGGTTGGAGGTGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSSVEAQGDRRCPLFLGQLPCLG*GLEVSP Trigger: TGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAG...CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGGCCACCAGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTGGACCCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GKATSQSAGRGTTKASWTQGDRR*PLFLGQ Trigger: CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTG...GGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCTGGTGGCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGGCCATGGTGAGGCCGATGAAGAAAAACATCTTGCCCTGCTGCAGGCTGCGTGGCGAGCCTCCCTaGGCCCGGTGGGAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: MVAMVRPMKKNILPCCRLRGEPP*ARWEEC Trigger: ACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACG...CAGCCTGCAGCAGGGCAAGATGTTTTTCTTCATCGGCCTCACCATGGCCACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCTGGCAAGAAGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAAT | + |
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Preference number: 2 (lower is better) Translates to: AQGDRRCPLFLGQCLWQEAAGWR*AQVSDN Trigger: ATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGC...TTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCTGGCAAGAAAGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAAT | + |
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Preference number: 2 (lower is better) Translates to: PRVTEDARFSWGSVSGKKAAGWR*AQVSDN Trigger: ATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGC...TTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCCACCAGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTGGACCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QGHQPECWEGYHKGFLDLLNWKR*CARKLS Trigger: ACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAG...CAGGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCTGGTGGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CAA 90 bp | GAGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGTTCCCCTaGCTGATGCCTCCGATCACCCAGGGACAACATCATCACTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: EPRSATMAVERLTFP*LMPPITQGQHHHWA Trigger: CGCCCAGTGATGATGTTGTCCCTGGGTGATCGGAGGCATCAGCAAGGGGAACGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGTTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RWAAVWKPRVTEDARFSWFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...CCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCTGGCAAGAATTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: AQGDRRCPLFLGQCLWQEFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...TTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGTGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QVGSSVEAQGDRRCPLFLWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...CAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: AVWKPRVTEDARFSWGSVWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...GACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTCGGAGATGGCAAAAAGTAGGCTGATCCAGGGCACCATTTCCACAGACAGGTTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: MSEMAKSRLIQGTISTDRFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...CCTGTCTGTGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCATCTCCGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | TTCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTaGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: FLLGCHPERGGA*RASLGPVGGVC Trigger: GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | CCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTaGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: PGPGGRSVLGAE*SGPRFPPGSQT Trigger: TGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| 3UTR TCA 72 bp | AACATCTTGCCCTGCTGCAGGCTAGGAGGTGGAGGGTaGGCGCCCAGCCCCCTAGGCCACCAACTGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NILPCCRLGGGG*APSPLGHQLPG Trigger: CCCAGGCAGTTGGTGGCCTAGGGGGCTGGGCGCTCACCCTCCACCTCCTAGCCTGCAGCAGGGCAAGATGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CCA 72 bp | GCCAAGGAGAAGGCTACCCCGATGACTGCCATGCCTTaGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACA | + |
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Preference number: 3 (lower is better) Translates to: AKEKATPMTAMP*LRVGGEPRSAT Trigger: TGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGCCTTCTCCTTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR TCA 72 bp | ATCTTGCCCTGCTGCAGGCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: ILPCCRLLNWKR*CARKLSVYSRP Trigger: AGGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGCCTGCAGCAGGGCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR TCA 72 bp | CCCTGCCTAGGGCGCCTAGGCTCCGCAGTATGCCCATaGTTGTGCCTTTTTGCCCTGGAGAACCATAACTGG | + |
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Preference number: 3 (lower is better) Translates to: PCLGRLGSAVCP*LCLFALENHNW Trigger: CCAGTTATGGTTCTCCAGGGCAAAAAGGCACAATCATGGGCATACTGCGGAGCCTAGGCGCCCTAGGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | GCTGGGGTTGGGTGTGGCAGCTCAGCTACTCCTCCTTaGAAGTCTCTGCTGGATGCTTCAGCTTCCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: AGVGCGSSATPP*KSLLDASASTG Trigger: TCCTGTGGAAGCTGAAGCATCCAGCAGAGACTTCCAAGGAGGAGTAGCTGAGCTGCCACACCCAACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | AGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTaGACCTGGGGTCTGAGAACCTCGAAGCCACTAATA | + |
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Preference number: 3 (lower is better) Translates to: SQSAGRGTTKAS*TWGLRTSKPLI Trigger: TATTAGTGGCTTCGAGGTTCTCAGACCCCAGGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CCA 72 bp | AGTGCTGGGAGGGGTACCACAAAGGCTTCCTGGACCTaGGGTCTGAGAACCTCGAAGCCACTAATATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SAGRGTTKASWT*GLRTSKPLIWR Trigger: TCTCCATATTAGTGGCTTCGAGGTTCTCAGACCCCAGGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| 3UTR CCA 72 bp | TGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAGAAACAGAAGATGAAC | + |
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Preference number: 3 (lower is better) Translates to: WKPRVTEDARFS*GSVSGKKQKMN Trigger: GTTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | CTTTTTGCCCTGGAGAACCATAACTGGAGACCATGGTaGACAGACCAGGCACCACAACAGCAGCAGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: LFALENHNWRPW*TDQAPQQQQQR Trigger: CCTTTGCTGCTGCTGTTGTGGTGCCTGGTCTGTCCACCATGGTCTCCAGTTATGGTTCTCCAGGGCAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR CCA 72 bp | GCTCCGCAGTATGCCCATGATTGTGCCTTTTTGCCCTaGAGAACCATAACTGGAGACCATGGTGGACAGACC | + |
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Preference number: 3 (lower is better) Translates to: APQYAHDCAFLP*RTITGDHGGQT Trigger: GGTCTGTCCACCATGGTCTCCAGTTATGGTTCTCCAGGGCAAAAAGGCACAATCATGGGCATACTGCGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
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| 3UTR TCA 72 bp | ACTAATATGGAGACCTACCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TNMETYLLNWKR*CARKLSVYSRP Trigger: AGGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGGTAGGTCTCCATATTAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCCCGGCCCCAACGCCCTaGCTAGGGCGCCTAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PERGGAWRASLGPVGGVCPAPTP*LGRLGS Trigger: GGAGCCTAGGCGCCCTAGGCAGGGCGTTGGGGCCGG...GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCCCGGCCCCAACGCCCTaGCTAGGGCGCCTAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGPAPTP*LGRLGS Trigger: GGAGCCTAGGCGCCCTAGGCAGGGCGTTGGGGCCGG...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCCGGCCCCAACGCCCTaGCTAGGGCGCCTAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVWAQVPTWQPDSWGWVWPAPTP*LGRLGS Trigger: GGAGCCTAGGCGCCCTAGGCAGGGCGTTGGGGCCGG...CCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCGAGGCAGCAACAGCGTaGACGCCAGGAGGTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PERGGAWRASLGPVGGVCEAATA*TPGGRV Trigger: TACTCGACCTCCTGGCGTTCACGCTGTTGCTGCCTC...GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGCHPERGGAWRASLGPAAGWR*AQVSDN Trigger: ATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGC...CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTCTGCCATGCCTTGGCTaGGGGTTGGAGGTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGVASLPGPGGRSVLGALPCLG*GLEVSP Trigger: TGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAG...AGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCTCCGCCGGGCGTAGGTaGCCTGTATGGTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SCWVAIQREEGRGEPPWASAGRR*PVWWPW Trigger: CCATGGCCACCATACAGGGCACCTACGCCCGGCGGA...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | GGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGGAGGCAGCAACAGCGTaGACGCCAGGAGGTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVASLPGPGGRSVLGAEWEAATA*TPGGRV Trigger: TACTCGACCTCCTGGCGTTCACGCTGTTGCTGCCTC...CCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGCHPERGGAWRASLGPGAEKN*RREKAE Trigger: CTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACC...CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCATCCGCCGGGCGTAGGTaGCCTGTATGGTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRFPPGSQTAGVGCGSSSAGRR*PVWWPW Trigger: CCATGGCCACCATACAGGGCACCTACGCCCGGCGGA...TGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCTCCGCCGGGCGTAGGTaGCCTGTATGGTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGSAGRR*PVWWPW Trigger: CCATGGCCACCATACAGGGCACCTACGCCCGGCGGA...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLPSRERRGVASLPGPQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...GGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECAQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPGSHLAARQLGLGVAAAAGWR*AQVSDN Trigger: ATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGC...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSAAGWR*AQVSDN Trigger: ATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGC...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCAACGGCGTAAGTTTCTaGGTCTGTGCTCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PERGGAWRASLGPVGGVCNGVSF*VCAQQA Trigger: CGCCTGCTGAGCACAGACTCAGAAACTTACGCCGTT...GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTGATGTGCCAGGAAGCTaGGTGTGTACTCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECADVPGS*VCTPGL Trigger: CAGGCCTGGAGTACACACTCAGCTTCCTGGCACATC...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPGAEKN*RREKAE Trigger: CTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACC...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCAGCTCCTGTGAGTGGTaGGGAGAAGAACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PERGGAWRASLGPVGGVCSSCEW*GEELQE Trigger: CTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCT...GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCACTGCCATGCCTTGGCTaGGGGTTGGAGGTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPLPCLG*GLEVSP Trigger: TGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAG...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECAQGDRR*PLFLGQ Trigger: CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGVASLPGPGGRSVLGAEQGDRR*PLFLGQ Trigger: CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTG...CTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGVASLPGPGGRSVLGAQGDRR*PLFLGQ Trigger: CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTG...AGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGTGCCCTCGTCACAGCTaGAGCTTCCTTGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGCPRHS*SFLARA Trigger: AGCCCTGGCAAGGAAGCTGCAGCTGTGACGAGGGCA...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGVASLPGPGGRSVLGAEDARFS*GSVSGK Trigger: CTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATC...CTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCACAGTGAAGCAGACCTaGGCCCCAGTCAGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGLPSRERRGVASLPGPTVKQT*APVSQY Trigger: GTACTGGCTGACTGGGGCCCAGGTCTGCTTCACTGT...GGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTACAGTGAAGCAGACCTaGGCCCCAGTCAGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRGVASLPGPGGRSVLGATVKQT*APVSQY Trigger: GTACTGGCTGACTGGGGCCCAGGTCTGCTTCACTGT...AGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCGAGGCAGCAACAGCGTaGACGCCAGGAGGTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGEAATA*TPGGRV Trigger: TACTCGACCTCCTGGCGTTCACGCTGTTGCTGCCTC...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPWHPDG*SKPVYP Trigger: GGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCA...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCAACGGCGTAAGTTTCTaGGTCTGTGCTCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PAGLPSRERRGVASLPGPNGVSF*VCAQQA Trigger: CGCCTGCTGAGCACAGACTCAGAAACTTACGCCGTT...GGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECALNWKR*CARKLS Trigger: ACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCAGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPGAEKN*RREKAE Trigger: CTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACC...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTCTGCCATGCCTTGGCTaGGGGTTGGAGGTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCLPCLG*GLEVSP Trigger: TGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAG...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTTTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECAFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTGCCCTCGTCACAGCTaGAGCTTCCTTGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSCPRHS*SFLARA Trigger: AGCCCTGGCAAGGAAGCTGCAGCTGTGACGAGGGCA...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGCHPERGGAWRASLGPPLASR*LKQTSL Trigger: TAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGG...CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPDARFS*GSVSGK Trigger: CTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATC...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCACAGTGAAGCAGACCTaGGCCCCAGTCAGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPTVKQT*APVSQY Trigger: GTACTGGCTGACTGGGGCCCAGGTCTGCTTCACTGT...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSWHPDG*SKPVYP Trigger: GGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCA...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCATGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRFPPGSQTAGVGCGSSWHPDG*SKPVYP Trigger: GGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCA...TGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTGATGTGCCAGGAAGCTaGGTGTGTACTCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPGSHLAARQLGLGVAADVPGS*VCTPGL Trigger: CAGGCCTGGAGTACACACTCAGCTTCCTGGCACATC...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCGATGTGCCAGGAAGCTaGGTGTGTACTCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSDVPGS*VCTPGL Trigger: CAGGCCTGGAGTACACACTCAGCTTCCTGGCACATC...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCWVAIQREEGRGEPPWALNWKR*CARKLS Trigger: ACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAG...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | GGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCCGCAGTATGCCCATaGTTGTGCCTTTTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVASLPGPGGRSVLGAEWSAVCP*LCLFAL Trigger: CAGGGCAAAAAGGCACAATCATGGGCATACTGCGGA...CCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGTCCGCAGTATGCCCATaGTTGTGCCTTTTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGCHPERGGAWRASLGPSAVCP*LCLFAL Trigger: CAGGGCAAAAAGGCACAATCATGGGCATACTGCGGA...CGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGAGCTCCTGTGAGTGGTaGGGAGAAGAACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGSSCEW*GEELQE Trigger: CTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCT...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCTTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCTGGAAGCGCTGATGTaGCAGGAAGCTGAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECALEALM*QEAECV Trigger: TACACACTCAGCTTCCTGGCACATCAGCGCTTCCAG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTTGCCCTCGTCACAGCTaGAGCTTCCTTGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCCPRHS*SFLARA Trigger: AGCCCTGGCAAGGAAGCTGCAGCTGTGACGAGGGCA...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SCWVAIQREEGRGEPPWAPLASR*LKQTSL Trigger: TAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGG...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCAGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPDARFS*GSVSGK Trigger: CTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATC...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCAAGGTGGGCAGCAGTGTaGAAGCCCAGGGTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPRWAAV*KPRVTE Trigger: TTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCT...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGAGGTGGGCAGCAGTGTaGAAGCCCAGGGTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVWAQVPTWQPDSWGWVWRWAAV*KPRVTE Trigger: TTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCT...CCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGCATAACTGGAGACCATaGTGGACAGACCAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GVASLPGPGGRSVLGAEWHNWRP*WTDQAP Trigger: TGGTGCCTGGTCTGTCCACCATGGTCTCCAGTTATG...CCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCATAACTGGAGACCATaGTGGACAGACCAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECAHNWRP*WTDQAP Trigger: TGGTGCCTGGTCTGTCCACCATGGTCTCCAGTTATG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
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| CDS-3UTR TCA 90 bp | GCTGAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEWSGPRFPPGSQTAGVGLNWKR*CARKLS Trigger: ACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAG...CCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGCCACCAGCCAGAGTGCTGGGAGGGGTACCACAAAGGCTTCCTGGACCGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKATSQSAGRGTTKASWTGAEKN*RREKAE Trigger: CTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACC...GGTCCAGGAAGCCTTTGTGGTACCCCTCCCAGCACTCTGGCTGGTGGCCTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCAAGCTCCTGTGAGTGGTaGGGAGAAGAACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRFPPGSQTAGVGCGSSSSCEW*GEELQE Trigger: CTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCT...TGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCATTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTGAAGTCTCTGCTGGATaGTTCAGCTTCCACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECAEVSAG*FSFHRS Trigger: ACTCCTGTGGAAGCTGAAGCATCCAGCAGAGACTTC...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTCTCCTTGGAAGTCTCTaGTGGATGCTTCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGVASLPGPGGRSVLGALLGSL*WMLQLP Trigger: TGGAAGCTGAAGCATCCAGCAGAGACTTCCAAGGAG...AGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGPLASR*LKQTSL Trigger: TAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGG...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCACCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPPLASR*LKQTSL Trigger: TAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGG...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCAACTGGAGACCATGGTaGACAGACCAGGCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SCWVAIQREEGRGEPPWANWRPW*TDQAPQ Trigger: TTGTGGTGCCTGGTCTGTCCACCATGGTCTCCAGTT...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTCTTGGAAGTCTCTGCTaGATGCTTCAGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QREEGRGEPPWARWEECALGSLC*MLQLPQ Trigger: CTGTGGAAGCTGAAGCATCCAGCAGAGACTTCCAAG...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
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| CDS-3UTR TCA 90 bp | GGCCAAGGAGAAGGCTACCCCGATGACTGCCATGCCTTGGCTGCGGGTTGGAGGCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GQGEGYPDDCHALAAGWRQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...CCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGCCTTCTCCTTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCTGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCWVAIQREEGRGEPPWAWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...GGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
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| CDS-3UTR TCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTAACGGCGTAAGTTTCTaGGTCTGTGCTCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCNGVSF*VCAQQA Trigger: CGCCTGCTGAGCACAGACTCAGAAACTTACGCCGTT...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCATCCGCAGTATGCCCATaGTTGTGCCTTTTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPSAVCP*LCLFAL Trigger: CAGGGCAAAAAGGCACAATCATGGGCATACTGCGGA...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCTGGAAGCGCTGATGTaGCAGGAAGCTGAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGPGSHLAARQLGLGVAALEALM*QEAECV Trigger: TACACACTCAGCTTCCTGGCACATCAGCGCTTCCAG...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCCTGGAAGCGCTGATGTaGCAGGAAGCTGAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSLEALM*QEAECV Trigger: TACACACTCAGCTTCCTGGCACATCAGCGCTTCCAG...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCCTCCTTGGAAGTCTCTaGTGGATGCTTCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPGGRSVLGAEWSGPLLGSL*WMLQLP Trigger: TGGAAGCTGAAGCATCCAGCAGAGACTTCCAAGGAG...GGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGCTGGGGCAGTGTCTCTaGCAAGAAACAGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVASLPGPGGRSVLGAEWLGQCL*QETEDE Trigger: TTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAG...CCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGCTGGGGCAGTGTCTCTaGCAAGAAACAGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGVASLPGPGGRSVLGAELGQCL*QETEDE Trigger: TTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAG...CTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAACTGGAGACCATGGTaGACAGACCAGGCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGNWRPW*TDQAPQ Trigger: TTGTGGTGCCTGGTCTGTCCACCATGGTCTCCAGTT...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGAACTGGAGACCATGGTaGACAGACCAGGCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VVWAQVPTWQPDSWGWVWNWRPW*TDQAPQ Trigger: TTGTGGTGCCTGGTCTGTCCACCATGGTCTCCAGTT...CCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGCATAACTGGAGACCATaGTGGACAGACCAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AEWSGPRFPPGSQTAGVGHNWRP*WTDQAP Trigger: TGGTGCCTGGTCTGTCCACCATGGTCTCCAGTTATG...CCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCTGTGCCTTTTTGCCCTaGAGAACCATAACTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGLPSRERRGVASLPGPCAFLP*RTITGD Trigger: GTCTCCAGTTATGGTTCTCCAGGGCAAAAAGGCACA...GGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCTTGGAAGTCTCTGCTaGATGCTTCAGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGLGSLC*MLQLPQ Trigger: CTGTGGAAGCTGAAGCATCCAGCAGAGACTTCCAAG...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGAGGCAGCAACAGCGTaGACGCCAGGAGGTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVGSSVEAQGDRRCPLFLEAATA*TPGGRV Trigger: TACTCGACCTCCTGGCGTTCACGCTGTTGCTGCCTC...CAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCTGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | GGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCATGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRFPPGSQTAGVGCGSSWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...TGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCGAAGTCTCTGCTGGATaGTTCAGCTTCCACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSEVSAG*FSFHRS Trigger: ACTCCTGTGGAAGCTGAAGCATCCAGCAGAGACTTC...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCCTCCTTGGAAGTCTCTaGTGGATGCTTCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGLLGSL*WMLQLP Trigger: TGGAAGCTGAAGCATCCAGCAGAGACTTCCAAGGAG...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGTGTGCCTTTTTGCCCTaGAGAACCATAACTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGCAFLP*RTITGD Trigger: GTCTCCAGTTATGGTTCTCCAGGGCAAAAAGGCACA...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | ATGACTGCCATGCCTTGGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTAMPWLRVGGEPRSATMWHPDG*SKPVYP Trigger: GGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCA...CATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGCAGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGTGCTCAGCAGGCGGGTCCTGACTGTGAGTGACAGCCGCAAAGCGAAGCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESVLSRRVLTVSDSRKAKQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...CTTCGCTTTGCGGCTGTCACTCACAGTCAGGACCCGCCTGCTGAGCACAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134156.8 ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | CTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGCAGAGGCAGCTCCTGTaGGTGGTGCGGAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRVGGEPRSATMAVERLTQRQLL*VVRRRT Trigger: AGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTG...CGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 ENSMUST00000137150.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGAGAAGGCTACCCCGATGACTGCCATGCCTTGGCTGCGGGTTGGAGGTAGCTCCTGTGAGTGGTaGGGAGAAGAACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKEKATPMTAMPWLRVGGSSCEW*GEELQE Trigger: CTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCT...ACCTCCAACCCGCAGCCAAGGCATGGCAGTCATCGGGGTAGCCTTCTCCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGAAGTCTCTGCTGGATaGTTCAGCTTCCACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCEVSAG*FSFHRS Trigger: ACTCCTGTGGAAGCTGAAGCATCCAGCAGAGACTTC...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCGAGTGTGCCCAGCCAATTAAGAGGAAGGCTGGTACTAGCAGCAGCATTGTCCGCCGGGCGTAGGTaGCCTGCTGAACTGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AASVPSQLRGRLVLAAALSAGRR*PAELEA Trigger: CGCTTCCAGTTCAGCAGGGCACCTACGCCCGGCGGA...CAATGCTGCTGCTAGTACCAGCCTTCCTCTTAATTGGCTGGGCACACTCGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCTGGGGCAGTGTCTCTaGCAAGAAACAGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPGSHLAARQLGLGVAALGQCL*QETEDE Trigger: TTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAG...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTTGTGCCTTTTTGCCCTaGAGAACCATAACTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGPGSHLAARQLGLGVAACAFLP*RTITGD Trigger: GTCTCCAGTTATGGTTCTCCAGGGCAAAAAGGCACA...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTCTTGGAAGTCTCTGCTaGATGCTTCAGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCLGSLC*MLQLPQ Trigger: CTGTGGAAGCTGAAGCATCCAGCAGAGACTTCCAAG...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR TCA 90 bp | AACGTTCCCCTTGCTGATGCCTCCGATCACCCAGGGACAACATCATCACTGGGCGAGGCAGCAACAGCGTaGACGCCAGGAGGTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVPLADASDHPGTTSSLGEAATA*TPGGRV Trigger: TACTCGACCTCCTGGCGTTCACGCTGTTGCTGCCTC...GCCCAGTGATGATGTTGTCCCTGGGTGATCGGAGGCATCAGCAAGGGGAACGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | ACGTTCCCCTTGCTGATGCCTCCGATCACCCAGGGACAACATCATCACTGGGCGTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPLLMPPITQGQHHHWAWHPDG*SKPVYP Trigger: GGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCA...CGCCCAGTGATGATGTTGTCCCTGGGTGATCGGAGGCATCAGCAAGGGGAACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGAGCTCCTGTGAGTGGTaGGGAGAAGAACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVGGEPRSATMAVERLTSSCEW*GEELQE Trigger: CTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCT...CGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGAGCATCAGTCCCAAGCCCAACGTAGGCAGCGAGTGTGCCCAGCCAATAGGTGGGCAGCAGTGTaGAAGCCCAGGGTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVEHQSQAQRRQRVCPANRWAAV*KPRVTE Trigger: TTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCT...ATTGGCTGGGCACACTCGCTGCCTACGTTGGGCTTGGGACTGATGCTCTACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| 3UTR CAA 72 bp | AGCTGGGGTTGGGTGTGGCAGCTCAGCTACTCCTCCTaGGAAGTCTCTGCTGGATGCTTCAGCTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWGWVWQLSYSS*EVSAGCFSFHR Trigger: CCTGTGGAAGCTGAAGCATCCAGCAGAGACTTCCAAGGAGGAGTAGCTGAGCTGCCACACCCAACCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137150.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGTAGGCAGCGAGATGTGCCAGGAAGCTaGGTGTGTACTCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSKGVEHQSQAQRRQRDVPGS*VCTPGL Trigger: CAGGCCTGGAGTACACACTCAGCTTCCTGGCACATC...TCGCTGCCTACGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR TCA 90 bp | GCGAGTGTGCCCAGCCAATTAAGAGGAAGGCTGGTACTAGCAGCAGCATTGCCCCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASVPSQLRGRLVLAAALPLNWKR*CARKLS Trigger: ACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAG...GGGCAATGCTGCTGCTAGTACCAGCCTTCCTCTTAATTGGCTGGGCACACTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR GCA 90 bp | CAGGCACCACAACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGTTCCACAGACAGGAATaGTCCCAGCATGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAPQQQQQRSRASVPSPTFHRQE*SQHGTQ Trigger: CTGGGTCCCATGCTGGGAGCATTCCTGTCTGTGGAA...CGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTTGTGGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCGAGTGTGCCCAGCCAATTAAGAGGAAGGCTGGTACTAGCAGCAGCATTGCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AASVPSQLRGRLVLAAALQGDRR*PLFLGQ Trigger: CTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTG...CAATGCTGCTGCTAGTACCAGCCTTCCTCTTAATTGGCTGGGCACACTCGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR CCA 90 bp | CACCACAACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGTAGGGATGCCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHNSSSKGVEHQSQAQRRDARFS*GSVSGK Trigger: CTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATC...CCTACGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR TCA 90 bp | AACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGTAGGCAGCGAAACGGCGTAAGTTTCTaGGTCTGTGCTCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSKGVEHQSQAQRRQRNGVSF*VCAQQA Trigger: CGCCTGCTGAGCACAGACTCAGAAACTTACGCCGTT...TCGCTGCCTACGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAGGCTGATCCAGGGCACCATTTCCACAGACAGGAATGCTCCCAGCATGGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSRLIQGTISTDRNAPSMGAEKN*RREKAE Trigger: CTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACC...CATGCTGGGAGCATTCCTGTCTGTGGAAATGGTGCCCTGGATCAGCCTACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000134156.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCACCACAACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGCTGGAAGCGCTGATGTaGCAGGAAGCTGAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAPQQQQQRSRASVPSPTLEALM*QEAECV Trigger: TACACACTCAGCTTCCTGGCACATCAGCGCTTCCAG...CGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTTGTGGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGTAGGCAGCGAGTGTGGCAAAAAGTAGGCTaGTCCAGGGCACCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKGVEHQSQAQRRQRVWQKVG*SRAPFP Trigger: TGGAAATGGTGCCCTGGATCAGCCTACTTTTTGCCA...CACTCGCTGCCTACGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR CCA 90 bp | AACGTAGGCAGCGAGTGTGCCCAGCCAATTAAGAGGAAGGCTGGTACTAGCAGCCTGGGGCAGTGTCTCTaGCAAGAAACAGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVGSECAQPIKRKAGTSSLGQCL*QETEDE Trigger: TTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAG...GCTGCTAGTACCAGCCTTCCTCTTAATTGGCTGGGCACACTCGCTGCCTACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS-3UTR CCA 90 bp | AAACAGAAGATGAACAACATGTCGGAGATGGCAAAAAGTAGGCTGATCCAGGGCCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQKMNNMSEMAKSRLIQGPLASR*LKQTSL Trigger: TAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGG...GCCCTGGATCAGCCTACTTTTTGCCATCTCCGACATGTTGTTCATCTTCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000137150.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTACAGCTGCAGCTTCCTaGCCAGGGCTGATCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QREEGRGEPPWARWEECATAAAS*PGLIRR Trigger: CCGGCGGATCAGCCCTGGCAAGGAAGCTGCAGCTGT...AGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTACAGCTGCAGCTTCCTaGCCAGGGCTGATCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPGSHLAARQLGLGVAATAAAS*PGLIRR Trigger: CCGGCGGATCAGCCCTGGCAAGGAAGCTGCAGCTGT...AGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTACAGCTGCAGCTTCCTaGCCAGGGCTGATCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EWSGPRFPPGSQTAGVGCTAAAS*PGLIRR Trigger: CCGGCGGATCAGCCCTGGCAAGGAAGCTGCAGCTGT...ACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGGTACTAGCAGCAGCATaGCCCTCGTCACAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVASLPGPGGRSVLGAEWVLAAA*PSSQLQ Trigger: CTGCAGCTGTGACGAGGGCAATGCTGCTGCTAGTAC...CCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGGGTTGCCATCCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGLPSRERRGVASLPGPPNRTL*YLFSAG Trigger: GCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGG...GGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS GCA 90 bp | GCTGAGCAGGTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATaGCTGTGGGAGAAAGCGAGGGCTGGCCAGGAGGCTGGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AEQVGSSVEAQGDRR*LWEKARAGQEAGST Trigger: TGTGCTCCCAGCCTCCTGGCCAGCCCTCGCTTTCTCCCACAGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCACCTGCTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137506.6 |
||
| CDS-3UTR CAA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGPNRTL*YLFSAG Trigger: GCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGG...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAGAGGAGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCATGAAGAAAAACATCTaGCCCTGCTGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PERGGAWRASLGPVGGVCMKKNI*PCCRLL Trigger: CAGCAGCCTGCAGCAGGGCAAGATGTTTTTCTTCAT...GCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGCCCAGGTTCCCAGTACTAGCAGCAGCATaGCCCTCGTCACAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGGRSVLGAEWSGPRFPVLAAA*PSSQLQ Trigger: CTGCAGCTGTGACGAGGGCAATGCTGCTGCTAGTAC...TGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCTCAGTACTAGCAGCAGCATaGCCCTCGTCACAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPRFPPGSQTAGVGCGSSVLAAA*PSSQLQ Trigger: CTGCAGCTGTGACGAGGGCAATGCTGCTGCTAGTAC...TGAGCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS-3UTR CAA 90 bp | TGGTCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSGPRFPPGSQTAGVGCGPNRTL*YLFSAG Trigger: GCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGG...GCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGCCCAGGTTCCCACCTGGCAGCCAGACAGCTGGGGTTGGGTGTGGCAGCCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGPRFPPGSQTAGVGCGSPNRTL*YLFSAG Trigger: GCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGG...GCTGCCACACCCAACCCCAGCTGTCTGGCTGCCAGGTGGGAACCTGGGCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000137150.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGTGGCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGATGAAGAAAAACATCTaGCCCTGCTGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGVASLPGPGGRSVLGAEMKKNI*PCCRLL Trigger: CAGCAGCCTGCAGCAGGGCAAGATGTTTTTCTTCAT...CTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGCCACGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
||
| CDS TCA 90 bp | AGGGCTGATCCGCCGGGCGTAGGTGCCCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCCTGAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RADPPGVGALLNWKR*CARKLSVYSRPENR Trigger: CCTGTTCTCAGGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGGGCACCTACGCCCGGCGGATCAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
||
| CDS GCA 90 bp | CCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCATaGCTTGGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVTEDARFSWGSVS*LGCGLEVSPGQRQW Trigger: CCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS-3UTR CAA 90 bp | GCGAGCCTCCCTGGGCCCGGTGGGAGGAGTGTGCTAGGAGCTGAGTGGTCTGGGATGAAGAAAAACATCTaGCCCTGCTGCAGGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ASLPGPGGRSVLGAEWSGMKKNI*PCCRLL Trigger: CAGCAGCCTGCAGCAGGGCAAGATGTTTTTCTTCAT...CCCAGACCACTCAGCTCCTAGCACACTCCTCCCACCGGGCCCAGGGAGGCTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 |
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| CDS CCA 90 bp | GGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCATGCCTTaGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACAATGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GDRRCPLFLGQCLMP*LRVGGEPRSATMAV Trigger: CACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS-3UTR CAA 90 bp | CAGGCACCACAACAGCAGCAGCAAAGGAGTAGAGCATCAGTCCCAAGCCCAACGACAGCTGCAGCTTCCTaGCCAGGGCTGATCCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: QAPQQQQQRSRASVPSPTTAAAS*PGLIRR Trigger: CCGGCGGATCAGCCCTGGCAAGGAAGCTGCAGCTGT...CGTTGGGCTTGGGACTGATGCTCTACTCCTTTGCTGCTGCTGTTGTGGTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
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| CDS TCA 90 bp | GCTTTTCCTGGGGCAGTGTCTCATGCCTTGGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AFPGAVSHALAAGWR*AQVSDNGCGEVNVP Trigger: GGGAACGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS CCA 90 bp | CCCACACTGCATAGGAGATGGCCAAACCAGGGACAACATCATCACTaGGCGCCTCCCCAGGTAATCAGAGGCAGCTCCTGTGAGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PTLHRRWPNQGQHHH*APPQVIRGSSCEWC Trigger: GCACCACTCACAGGAGCTGCCTCTGATTACCTGGGGAGGCGCCCAGTGATGATGTTGTCCCTGGTTTGGCCATCTCCTATGCAGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| CDS TCA 90 bp | GAACAGGACACTGTTGTACCTCTTTTCCGCTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCCACGCTGCCAGGAGCCATAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: EQDTVVPLFRWHPDG*SKPVYPTLPGAIEG Trigger: CCCCTCTATGGCTCCTGGCAGCGTGGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000137150.8 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS GCA 90 bp | CCTGGAGGCCAAGAAGGCCTTAAAGCTCCGAGAGGTAGCCCACACTaGATAGGAGATGGCCAAACCAGGGACAACATCATCACTGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PGGQEGLKAPRGSPH*IGDGQTRDNIITGR Trigger: GCGCCCAGTGATGATGTTGTCCCTGGTTTGGCCATCTCCTATGCAGTGTGGGCTACCTCTCGGAGCTTTAAGGCCTTCTTGGCCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| CDS CCA 90 bp | CACTGCATAGGAGATGGCCAAACCTGTCAGGGACAACATCATCACTaGGCGCCTCCCCAGGTAATCAGAGGCAGCTCCTGTGAGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HCIGDGQTCQGQHHH*APPQVIRGSSCEWC Trigger: GCACCACTCACAGGAGCTGCCTCTGATTACCTGGGGAGGCGCCCAGTGATGATGTTGTCCCTGACAGGTTTGGCCATCTCCTATGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS-3UTR CAA 90 bp | GCCCAGGGTGACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCTGGCAAGAACCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AQGDRRCPLFLGQCLWQEPNRTL*YLFSAG Trigger: GCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGG...TTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126257.6 ENSMUST00000137150.8 |
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| CDS CCA 90 bp | CTCCGAACAGGACACTGTTGTACCTCTTTTCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTACCCCACGCTGCCAGGAGCCATAGA | + |
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Preference number: 5 (lower is better) Translates to: LRTGHCCTSFPLASR*LKQTSLPHAARSHR Trigger: TCTATGGCTCCTGGCAGCGTGGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000137150.8 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CCA 90 bp | GGGAGCACACAGCCTGGCAGCTTAGGGACCAGGACCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAGAAACAGAAGATGAACAACATGTCG | + |
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Preference number: 5 (lower is better) Translates to: GSTQPGSLGTRTRFS*GSVSGKKQKMNNMS Trigger: CGACATGTTGTTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGTCCTGGTCCCTAAGCTGCCAGGCTGTGTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137506.6 |
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| CDS GCA 90 bp | CCTGGAGGCCAAGAAGGCCTTAAAGCTCCGAGAGGTAGCCCACACTaGATAGGAGATGGCCAAACCTGTCAGGGACAACATCATCACTGG | + |
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Preference number: 5 (lower is better) Translates to: PGGQEGLKAPRGSPH*IGDGQTCQGQHHHW Trigger: CCAGTGATGATGTTGTCCCTGACAGGTTTGGCCATCTCCTATGCAGTGTGGGCTACCTCTCGGAGCTTTAAGGCCTTCTTGGCCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CAA 90 bp | AGCAAACCAGTCTACCCCACGCTGCCAGGAGCCATAGAGGGGGTCTaGTTCGCGGCCGTGTCTCTCCAGCAGCCCAGGCAGCAGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SKPVYPTLPGAIEGV*FAAVSLQQPRQQRQ Trigger: CTGCCTCTGCTGCCTGGGCTGCTGGAGAGACACGGCCGCGAACAAGACCCCCTCTATGGCTCCTGGCAGCGTGGGGTAGACTGGTTTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000137150.8 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS TCA 72 bp | CCGCCGGGCGTAGGTGCCCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PPGVGALLNWKR*CARKLSVYSRP Trigger: AGGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGGGCACCTACGCCCGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202378.4 |
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| CDS TCA 72 bp | GGGGCAGTGTCTCATGCCTTGGCTGCGGGTTGGAGGTaGGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GAVSHALAAGWR*AQVSDNGCGEV Trigger: AACCTCTCCACAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS GCA 72 bp | TCAGAGGCAGCTCCTGTGAGTGGTGCGGAGAAGAACTaGAGGAGGGAGAAGGCCGAGCCGATGAGACCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SEAAPVSGAEKN*RREKAEPMRPP Trigger: CGGAGGTCTCATCGGCTCGGCCTTCTCCCTCCTGCAGTTCTTCTCCGCACCACTCACAGGAGCTGCCTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CCA 72 bp | AGATGCCCGCTTTTCCTGGGGCAGTGTCTCATGCCTTaGCTGCGGGTTGGAGGTGAGCCCAGGTCAGCGACA | + |
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Preference number: 6 (lower is better) Translates to: RCPLFLGQCLMP*LRVGGEPRSAT Trigger: TGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS GCA 72 bp | ACAGAAGATGCCCGCTTTTCCTGGGGCAGTGTCTCATaGCTTGGCTGCGGGTTGGAGGTGAGCCCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: TEDARFSWGSVS*LGCGLEVSPGQ Trigger: CTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS GCA 72 bp | GTGGGCAGCAGTGTGGAAGCCCAGGGTGACAGAAGATaGCCGCTTTTCCTGGGGCAGTGTCTCATGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VGSSVEAQGDRR*PLFLGQCLMPW Trigger: CCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCACACTGCTGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS CCA 72 bp | TGGAAGCCCAGGGTGACAGAAGATGCCCGCTTTTCCTaGGGCAGTGTCTCATGCCTTGGCTGCGGGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: WKPRVTEDARFS*GSVSCLGCGLE Trigger: CTCCAACCCGCAGCCAAGGCATGAGACACTGCCCCAGGAAAAGCGGGCATCTTCTGTCACCCTGGGCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201147.2 |
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| CDS CAA 90 bp | AGGAGGGAGAAGGCCGAGCCGATGAGACCTCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGCATCCCGATGGCTGAAGCAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: RREKAEPMRPPNRTL*YLFSAGIPMAEANQ Trigger: CTGGTTTGCTTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGGAGGTCTCATCGGCTCGGCCTTCTCCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CAA 90 bp | GAGCCCAGGTCAGCGACAATGGCTGTGGAGAGGTTAACGTTCCCCTaGCTGATGCCTCCGATCACCCTGGAGGCCAAGAAGGCCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: EPRSATMAVERLTFP*LMPPITLEAKKALK Trigger: CTTTAAGGCCTTCTTGGCCTCCAGGGTGATCGGAGGCATCAGCAAGGGGAACGTTAACCTCTCCACAGCCATTGTCGCTGACCTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 ENSMUST00000201147.2 |
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| CDS TCA 72 bp | ACTGTTGTACCTCTTTTCCGCTGGCATCCCGATGGCTaGAGCAAACCAGTCTACCCCACGCTGCCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TVVPLFRWHPDG*SKPVYPTLPGA Trigger: GGCTCCTGGCAGCGTGGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000137150.8 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS TCA 72 bp | ATCTTGCCCTGCTGCAGGCTGCTGAACTGGAAGCGCTaGTGTGCCAGGAAGCTGAGTGTGTACTCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ILPCCRLLNWKR*CARKLSVYSRL Trigger: CAGCCTGGAGTACACACTCAGCTTCCTGGCACATCAGCGCTTCCAGTTCAGCAGCCTGCAGCAGGGCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202065.2 |
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| CDS CCA 72 bp | GGACACTGTTGTACCTCTTTTCCGCTGGCATCCCGATaGCTGAAGCAAACCAGTCTACCCCACGCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GHCCTSFPLASR*LKQTSLPHAAR Trigger: CCTGGCAGCGTGGGGTAGACTGGTTTGCTTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000137150.8 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CCA 72 bp | GGAGATGGCCAAACCTGTCAGGGACAACATCATCACTaGGCGCCTCCCCAGGTAATCAGAGGCAGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GDGQTCQGQHHH*APPQVIRGSSC Trigger: ACAGGAGCTGCCTCTGATTACCTGGGGAGGCGCCCAGTGATGATGTTGTCCCTGACAGGTTTGGCCATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CCA 72 bp | CAGCCTGGCAGCTTAGGGACCAGGACCCGCTTTTCCTaGGGCAGTGTCTCTGGCAAGAAACAGAAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: QPGSLGTRTRFS*GSVSGKKQKMN Trigger: GTTCATCTTCTGTTTCTTGCCAGAGACACTGCCCCAGGAAAAGCGGGTCCTGGTCCCTAAGCTGCCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137506.6 |
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| CDS CCA 72 bp | CATAGGAGATGGCCAAACCAGGGACAACATCATCACTaGGCGCCTCCCCAGGTAATCAGAGGCAGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HRRWPNQGQHHH*APPQVIRGSSC Trigger: ACAGGAGCTGCCTCTGATTACCTGGGGAGGCGCCCAGTGATGATGTTGTCCCTGGTTTGGCCATCTCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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| CDS CAA 72 bp | AAGGCCGAGCCGATGAGACCTCCGAACAGGACACTGTaGTACCTCTTTTCCGCTGGCATCCCGATGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KAEPMRPPNRTL*YLFSAGIPMAE Trigger: TTCAGCCATCGGGATGCCAGCGGAAAAGAGGTACAACAGTGTCCTGTTCGGAGGTCTCATCGGCTCGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000126257.6 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS CAA 72 bp | TCAGCGACAATGGCTGTGGAGAGGTTAACGTTCCCCTaGCTGATGCCTCCGATCACCCTGGAGGCCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SATMAVERLTFP*LMPPITLEAKK Trigger: CTTCTTGGCCTCCAGGGTGATCGGAGGCATCAGCAAGGGGAACGTTAACCTCTCCACAGCCATTGTCGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 ENSMUST00000201147.2 |
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| CDS GCA 72 bp | CAAGAAGGCCTTAAAGCTCCGAGAGGTAGCCCACACTaGATAGGAGATGGCCAAACCTGTCAGGGACAACAT | + |
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Preference number: 6 (lower is better) Translates to: QEGLKAPRGSPH*IGDGQTCQGQH Trigger: ATGTTGTCCCTGACAGGTTTGGCCATCTCCTATGCAGTGTGGGCTACCTCTCGGAGCTTTAAGGCCTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001109.11 ENSMUST00000114329.8 ENSMUST00000114331.10 ENSMUST00000149657.5 ENSMUST00000155577.8 |
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| CDS GCA 72 bp | CAAGAAGGCCTTAAAGCTCCGAGAGGTAGCCCACACTaGATAGGAGATGGCCAAACCAGGGACAACATCATC | + |
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Preference number: 6 (lower is better) Translates to: QEGLKAPRGSPH*IGDGQTRDNII Trigger: GATGATGTTGTCCCTGGTTTGGCCATCTCCTATGCAGTGTGGGCTACCTCTCGGAGCTTTAAGGCCTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134156.8 |
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