RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFHAS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070056

Ensembl transcript IDs: ENSMUST00000037666.6, ENSMUST00000209953.2

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGTTGTTCCAAGATTCGGGTTTTCAGAGATTCGTCACCTCGTCTaGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGA +
Preference number: 1 (lower is better)
Translates to: QVVPRFGFSEIRHLV*PLGTHPSASVVMGG
Trigger: TCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACGAGGTGACGAATCTCTGAAAACCCGAATCTTGGAACAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 90 bp CATCCATGGGCAGGGTATGCTCTCCCAAGGAGCCTTCTTCTGATTTaGCATGGCCCTCTGGGAAGTAAACCCAAAATCATAGCGGACATT +
Preference number: 1 (lower is better)
Translates to: HPWAGYALPRSLLLI*HGPLGSKPKIIADI
Trigger: AATGTCCGCTATGATTTTGGGTTTACTTCCCAGAGGGCCATGTCAAATCAGAAGAAGGCTCCTTGGGAGAGCATACCCTGCCCATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 90 bp CCCAGGTGTGAAATAAGGAAACAGAATTTCTCATACAGCCGCCGCTaGAATTCTTCTGGGGCAAGGTGGCTTCTGTATCTCAGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: PRCEIRKQNFSYSRR*NSSGARWLLYLSPS
Trigger: GGAAGGGCTGAGATACAGAAGCCACCTTGCCCCAGAAGAATTTCAGCGGCGGCTGTATGAGAAATTCTGTTTCCTTATTTCACACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 90 bp ATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGTGGCTCTaGATGAATAAACAGCCAATGAGGGATGGAGCCCTGAAAGAGGAT +
Preference number: 1 (lower is better)
Translates to: MVLLGPWLQTSSKWL*MNKQPMRDGALKED
Trigger: ATCCTCTTTCAGGGCTCCATCCCTCATTGGCTGTTTATTCATGCAGAGCCACTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 90 bp GGTCTGACACTAAAAGACACCAGCCCCATCTTGGCACAACTCTCATaGAGAATATTGCACCCAGTGTTCACTCATGCTAGAAGCGTCCAA +
Preference number: 1 (lower is better)
Translates to: GLTLKDTSPILAQLS*RILHPVFTHARSVQ
Trigger: TTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGGGGCTGGTGTCTTTTAGTGTCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 90 bp GATGTAAACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTaGAACACGTGCTGTTTGGCCCTAACCAGGAGGACACTGGAGAGC +
Preference number: 1 (lower is better)
Translates to: DVNTVLYSLQRMCLY*NTCCLALTRRTLES
Trigger: GCTCTCCAGTGTCCTCCTGGTTAGGGCCAAACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 90 bp CCGTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTaGGAGGCACGGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: PLVVRIETITNSERI*EARGSLGRTNSSCA
Trigger: AGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCCGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 90 bp TCAGTTGATCCCTCCTTCACATTGAACAAGAAACTGAAATCTGAGTaGCGCCTGGCCTGGAGCTATGGCTCATGTGTACACAGAAAACAC +
Preference number: 1 (lower is better)
Translates to: SVDPSFTLNKKLKSE*RLAWSYGSCVHRKH
Trigger: GTGTTTTCTGTGTACACATGAGCCATAGCTCCAGGCCAGGCGGCACTCAGATTTCAGTTTCTTGTTCAATGTGAAGGAGGGATCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 90 bp AAAACAATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGTaGCTCTGCATGAATAAACAGCCAATGAGGGATGGAGCCCTGAAA +
Preference number: 1 (lower is better)
Translates to: KTMVLLGPWLQTSSK*LCMNKQPMRDGALK
Trigger: TTTCAGGGCTCCATCCCTCATTGGCTGTTTATTCATGCAGAGCCACTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCATTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR TCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCCTGTATTAACTCCATaGAAATTCCACAGGCGCGGA +
Preference number: 2 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPPVLTP*KFHRRG
Trigger: TCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR-3UTR GCA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCCCTCTGGTTTACACTTaGACACATACACATGAGACC +
Preference number: 2 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSPLVYT*THTHET
Trigger: GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGG...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAACATTCGCTCCATGTTTaGTCCCATCTTCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKHSLHV*SHLPSP
Trigger: GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATG...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCCATTCGCTCCATGTTTaGTCCCATCTTCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCHSLHV*SHLPSP
Trigger: GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATG...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR-3UTR GCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAGTTCACAGAGGGCTCTaGAAAATCATGCACGCTGTT +
Preference number: 2 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQVHRGL*KIMHAV
Trigger: AACAGCGTGCATGATTTTGCAGAGCCCTCTGTGAAC...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCGATTCTTACCCATCCTaGAACTGTGTCCTAAAAGGA +
Preference number: 2 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSDSYPS*NCVLKG
Trigger: TCCTTTTAGGACACAGTTGCAGGATGGGTAAGAATC...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR TCA 90 bp CGCCACTGGGGAGTATTAAGAGTTCTAGGAACCAACCTTGAACCTAGCTATGGATCTGTTCTTTGCAGTTaGGTGGGTGGGCAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: RHWGVLRVLGTNLEPSYGSVLCS*VGGQKD
Trigger: GTCCTTTTGCCCACCCACTCAACTGCAAAGAACAGA...TCCATAGCTAGGTTCAAGGTTGGTTCCTAGAACTCTTAATACTCCCCAGTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp GCCTCAGTGGTCATGGGTGGAGACAGAACAGCTATCATTCTACCACCATGTCCATTGGCACAACTCTCATaGAGAATATTGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASVVMGGDRTAIILPPCPLAQLS*RILHPV
Trigger: CACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAA...TGGACATGGTGGTAGAATGATAGCTGTTCTGTCTCCACCCATGACCACTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAAACACCAGCCCCATCTTaGCACAACTCTCATGCAGAA +
Preference number: 2 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKTPAPS*HNSHAE
Trigger: TTCTGCATGAGAGTTGTGCCAAGATGGGGCTGGTGT...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR TCA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCCAGAGTAAGAAGAGCTaGCACACTTTTCTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RKGNANPLVYTCTHTHETQSKKS*HTFLVG
Trigger: CCCCACAAGAAAAGTGTGTCAGCTCTTCTTACTCTG...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAACTCAGTGGTCATGGGTaGAGACAGAACAGCTATCAT +
Preference number: 2 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKLSGHG*RQNSYH
Trigger: ATGATAGCTGTTCTGTCTCCACCCATGACCACTGAG...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 90 bp AGAGTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTaGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAACAC +
Preference number: 2 (lower is better)
Translates to: RVRRADTLFLWGTVS*TCFLSTHGGGGCKH
Trigger: GTGTTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR TCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTGGAGGATCACAGTTCTaGGGTTCGGGTTGTGAAACA +
Preference number: 2 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCGGSQF*GSGCET
Trigger: TGTTTCACAACCCGAACCTCAGAACTGTGATCCTCC...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 90 bp CTAAAAGACACCAGCCCCATCTTGGCACAACTCTCATGCAGAATATaGCACCCAGTGTTCACTCATGCTAGAAGCGTCCAACTGTATAAA +
Preference number: 2 (lower is better)
Translates to: LKDTSPILAQLSCRI*HPVFTHARSVQLYK
Trigger: TTTATACAGTTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGGGGCTGGTGTCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CCA 90 bp ACCCAGTGTTCACTCATGCTAGAAGCGTCCAACTGTATAAATTTAAATGTATTTAATCTGAGTGCCGCCTaGCCTGGAGCTATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: TQCSLMLEASNCINLNVFNLSAA*PGAMAH
Trigger: ATGAGCCATAGCTCCAGGCCAGGCGGCACTCAGATT...AAATACATTTAAATTTATACAGTTGGACGCTTCTAGCATGAGTGAACACTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR TCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTACCTGTATTAACTCCATaGAAATTCCACAGGCGCGGA +
Preference number: 2 (lower is better)
Translates to: LKIRGNCLCCDILGVNILPVLTP*KFHRRG
Trigger: TCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGG...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAAAGCCCTGAAAGAGGATaGTCCTTTCAGGAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: ITCQKVTDIQNMGICVYESPERG*SFQEGY
Trigger: GTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCT...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CCA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAATTGCAGTTGAGTGGGTaGGCAAAAGGACTACGAGAA +
Preference number: 2 (lower is better)
Translates to: ITCQKVTDIQNMGICVYELQLSG*AKGLRE
Trigger: TTCTCGTAGTCCTTTTGCCCACCCACTCAACTGCAA...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 90 bp GAAACATTTATTCTGGCAGCACTTGTACAATCCCAGGAAGTGGTTTaGATACCGTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAG +
Preference number: 2 (lower is better)
Translates to: ETFILAALVQSQEVV*IPLVVRIETITNSE
Trigger: CTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAACGGTATCAAAACCACTTCCTGGGATTGTACAAGTGCTGCCAGAATAAATGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR GCA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAATCCTCCAAGTGGCTCTaGATGAATAAACAGCCAATG +
Preference number: 2 (lower is better)
Translates to: ITCQKVTDIQNMGICVYESSKWL*MNKQPM
Trigger: CATTGGCTGTTTATTCATGCAGAGCCACTTGGAGGA...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp CCCTCCAAGGGTCCTCTGCAAGCACCCCAGTGTGCATaGGCGGTTTCACTCTGGGCCCCGGAAGGCGCTTGG +
Preference number: 3 (lower is better)
Translates to: PSKGPLQAPQCA*AVSLWAPEGAW
Trigger: CCAAGCGCCTTCCGGGGCCCAGAGTGAAACCGCGCATGCACACTGGGGTGCTTGCAGAGGACCCTTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR-3UTR CAA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCACATTCGCTCCATGTTaGCTCCCATCTTCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSTFAPC*LPSSQP
Trigger: GGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGT...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp AAGTTCTCACGCTTTGCTGGAGCTTTCTCGGGCACGTaGCCCTCTGATCGTGCCCACCCTAGCCACGATACA +
Preference number: 3 (lower is better)
Translates to: KFSRFAGAFSGT*PSDRAHPSHDT
Trigger: TGTATCGTGGCTAGGGTGGGCACGATCAGAGGGTCACGTGCCCGAGAAAGCTCCAGCAAAGCGTGAGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp GGCTACCAATCAGATGGAGAGGTTCACAGAGGGCTCTaGAAAATCATGCACGCTGTTCCCGGGGTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: GYQSDGEVHRGL*KIMHAVPGVRE
Trigger: CTCCCTGACCCCGGGAACAGCGTGCATGATTTTGCAGAGCCCTCTGTGAACCTCTCCATCTGATTGGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp TCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTaGTCCCATCTTCCCAGCCCCCTCCAACCCCTCCAA +
Preference number: 3 (lower is better)
Translates to: SEVRVVKHSLHV*SHLPSPLQPLQ
Trigger: TTGGAGGGGTTGGAGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR GCA 72 bp CTAGGACCTTGGCTGCAGACTTCCTCCAAGTGGCTCTaGATGAATAAACAGCCAATGAGGGATGGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LGPWLQTSSKWL*MNKQPMRDGAL
Trigger: CAGGGCTCCATCCCTCATTGGCTGTTTATTCATGCAGAGCCACTTGGAGGAAGTCTGCAGCCAAGGTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp TCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTaGAGACAGAACAGCTATCATTCTACCACCATGTCC +
Preference number: 3 (lower is better)
Translates to: SRNAPLSLSGHG*RQNSYHSTTMS
Trigger: GGACATGGTGGTAGAATGATAGCTGTTCTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp CAAACTCGGAGCGCATTTGAGAGGCACGGGGCTCCTTaGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGG +
Preference number: 3 (lower is better)
Translates to: QTRSAFERHGAP*VERIPLVLSGW
Trigger: CCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCCGTGCCTCTCAAATGCGCTCCGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp TGGGAGGGGACTCTGTCTCCATGGGCTGAACGCCACTaGGGAGTATTAAGAGTTCTAGGAACCAACCTTGAA +
Preference number: 3 (lower is better)
Translates to: WEGTLSPWAERH*GVLRVLGTNLE
Trigger: TTCAAGGTTGGTTCCTAGAACTCTTAATACTCCCCAGTGGCGTTCAGCCCATGGAGACAGAGTCCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCACATTCGCTCCATGTTaGCTCCCATCTTCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCTFAPC*LPSSQP
Trigger: GGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGT...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR TCA 72 bp CCGAGGGAGAGGCTAGCTTTTTCTGTTCTTTGCAGTTaGGTGGGTGGGCAAAAGGACTACGAGAAGAACCCA +
Preference number: 3 (lower is better)
Translates to: PRERLAFSVLCS*VGGQKDYEKNP
Trigger: TGGGTTCTTCTCGTAGTCCTTTTGCCCACCCACTCAACTGCAAAGAACAGAAAAAGCTAGCCTCTCCCTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp ATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATaGAAATTCCACAGGCGCGGATGTCACTGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: MSQSVPCPVLTP*KFHRRGCHWFL
Trigger: CAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
3UTR GCA 72 bp CCCTCCTTCACATTGAACAAGAAACTGAAATCTGAGTaGCGCCTGGCCTGGAGCTATGGCTCATGTGTACAC +
Preference number: 3 (lower is better)
Translates to: PSFTLNKKLKSE*RLAWSYGSCVH
Trigger: GTGTACACATGAGCCATAGCTCCAGGCCAGGCGGCACTCAGATTTCAGTTTCTTGTTCAATGTGAAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp CCAGCCCCATCTTGGCACAACTCTCATGCAGAATATTaGACCCAGTGTTCACTCATGCTAGAAGCGTCCAAC +
Preference number: 3 (lower is better)
Translates to: PAPSWHNSHAEY*TQCSLMLEASN
Trigger: GTTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp TACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTaGTGTTTGGCCCTAACCAGGAGGACACTGGAGAGC +
Preference number: 3 (lower is better)
Translates to: YSLQRMCLYCNT*CLALTRRTLES
Trigger: GCTCTCCAGTGTCCTCCTGGTTAGGGCCAAACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp GTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGTaGCTCTGCATGAATAAACAGCCAATGAGGGATGGA +
Preference number: 3 (lower is better)
Translates to: VLLGPWLQTSSK*LCMNKQPMRDG
Trigger: TCCATCCCTCATTGGCTGTTTATTCATGCAGAGCCACTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp GCAGGGTATGCTCTCCCAAGGAGCCTTCTTCTGATTTaGCATGGCCCTCTGGGAAGTAAACCCAAAATCATA +
Preference number: 3 (lower is better)
Translates to: AGYALPRSLLLI*HGPLGSKPKII
Trigger: TATGATTTTGGGTTTACTTCCCAGAGGGCCATGTCAAATCAGAAGAAGGCTCCTTGGGAGAGCATACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp GTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTaGGAGGCACGGGGCTCCTTGGGTAGAACGAATTCC +
Preference number: 3 (lower is better)
Translates to: VRIETITNSERI*EARGSLGRTNS
Trigger: GGAATTCGTTCTACCCAAGGAGCCCCGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp CGCCACTGGGGAGTATTAAGAGTTCTAGGAACCAACCTTGAACCTAGCTATGGACAAGTAGCTTTCTCCTaGGAGGATCACAGTTCTGAG +
Preference number: 3 (lower is better)
Translates to: RHWGVLRVLGTNLEPSYGQVAFS*EDHSSE
Trigger: CTCAGAACTGTGATCCTCCAAGGAGAAAGCTACTTG...TCCATAGCTAGGTTCAAGGTTGGTTCCTAGAACTCTTAATACTCCCCAGTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCGACACCAGCCCCATCTaGGCACAACTCTCATGCAGA +
Preference number: 3 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFDTSPI*AQLSCR
Trigger: TCTGCATGAGAGTTGTGCCAAGATGGGGCTGGTGTC...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp GCCTCAGTGGTCATGGGTGGAGACAGAACAGCTATCATTCTACCACCATGTCCAGATCCCTCCTTCACATaGAACAAGAAACTGAAATCT +
Preference number: 3 (lower is better)
Translates to: ASVVMGGDRTAIILPPCPDPSFT*NKKLKS
Trigger: AGATTTCAGTTTCTTGTTCAATGTGAAGGAGGGATC...TGGACATGGTGGTAGAATGATAGCTGTTCTGTCTCCACCCATGACCACTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp CTAAAAGACACCAGCCCCATCTTGGCACAACTCTCATaGAGAATATTGCACCCAGTGTTCACTCATGCTAGA +
Preference number: 3 (lower is better)
Translates to: LKDTSPILAQLS*RILHPVFTHAR
Trigger: TCTAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGGGGCTGGTGTCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp TCTGTGTTTATGAAAAGAGCATCCATGGGCAGGGTATaGTCTCCCAAGGAGCCTTCTTCTGATTTGACATGG +
Preference number: 3 (lower is better)
Translates to: SVFMKRASMGRV*SPKEPSSDLTW
Trigger: CCATGTCAAATCAGAAGAAGGCTCCTTGGGAGAGCATACCCTGCCCATGGATGCTCTTTTCATAAACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp AGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCCTGAGCTTTTTCTGTTCTTaGCAGTTGAGTGGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: RRADTLFLWGTVSLTCFLSFFCS*QLSGWA
Trigger: TGCCCACCCACTCAACTGCAAAGAACAGAAAAAGCT...CAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp TCTTCAAGTAGCTTTCTCCTTGGAGGATCACAGTTCTaGGGTTCGGGTTGTGAAACATTCGCTCCATGTTTG +
Preference number: 3 (lower is better)
Translates to: SSSSFLLGGSQF*GSGCETFAPCL
Trigger: CAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAAGGAGAAAGCTACTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp GAAATAAGGAAACAGAATTTCTCATACAGCCGCCGCTaGAATTCTTCTGGGGCAAGGTGGCTTCTGTATCTC +
Preference number: 3 (lower is better)
Translates to: EIRKQNFSYSRR*NSSGARWLLYL
Trigger: GAGATACAGAAGCCACCTTGCCCCAGAAGAATTTCAGCGGCGGCTGTATGAGAAATTCTGTTTCCTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp TTGAACAAGAAACTGAAATCTGAGTGCCGCCTGGCCTaGAGCTATGGCTCATGTGTACACAGAAAACACAAT +
Preference number: 3 (lower is better)
Translates to: LNKKLKSECRLA*SYGSCVHRKHN
Trigger: ATTGTGTTTTCTGTGTACACATGAGCCATAGCTCCAGGCCAGGCGGCACTCAGATTTCAGTTTCTTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp TCAGTGGTCTACAAAGGAAGGGGAATGCTAACCCTCTaGTTTACACTTGCACACATACACATGAGACCTATG +
Preference number: 3 (lower is better)
Translates to: SVVYKGRGMLTL*FTLAHIHMRPM
Trigger: CATAGGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCTTTGTAGACCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp ATAGAGAGAGAGAGAGAGACAATCCCTACTAGATTCTaGTTTCTGAGAAATTGCCTCCACATAACGGGCTCC +
Preference number: 3 (lower is better)
Translates to: IERERETIPTRF*FLRNCLHITGS
Trigger: GGAGCCCGTTATGTGGAGGCAATTTCTCAGAAATCAGAATCTAGTAGGGATTGTCTCTCTCTCTCTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp AGTAACAGATATTCAGAACATGGGCATCTGTGTTTATaGAAAGAGCATCCATGGGCAGGGTATGCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SNRYSEHGHLCL*KEHPWAGYALP
Trigger: TGGGAGAGCATACCCTGCCCATGGATGCTCTTTTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR GCA 72 bp CAAAGGAAGGGGAATGCTAACCCTCTGGTTTACACTTaGACACATACACATGAGACCTATGACAGAAGAGAT +
Preference number: 3 (lower is better)
Translates to: QRKGNANPLVYT*THTHETYDRRD
Trigger: ATCTCTTCTGTCATAGGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CCA 72 bp GGTGACAGAGTAAGAAGAGCTGACACACTTTTCTTGTaGGGAACAGTCAGTTTGACATGTTTCCTGTCAACA +
Preference number: 3 (lower is better)
Translates to: GDRVRRADTLFL*GTVSLTCFLST
Trigger: TGTTGACAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTACTCTGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAAGGTTCTACTAGGACCTaGGCTGCAGACTTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: ITCQKVTDIQNMGICVYEGSTRT*AADFLQ
Trigger: TTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACC...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp TCTTACACTAGTTACGGAACGGCAATGAACGTCAGTTaGTCCCTCCTTCACATTGAACAAGAAACTGAAATC +
Preference number: 3 (lower is better)
Translates to: SYTSYGTAMNVS*SLLHIEQETEI
Trigger: GATTTCAGTTTCTTGTTCAATGTGAAGGAGGGATCAACTGACGTTCATTGCCGTTCCGTAACTAGTGTAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp CTTCCTCTTAAAGATTCGTGGCAACTGCCTGTGCTGTaGCATTCTAGGAGTCAATATTTTAGAATACAGGTG +
Preference number: 3 (lower is better)
Translates to: LPLKDSWQLPVL*HSRSQYFRIQV
Trigger: CACCTGTATTCTAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAAGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp ACATATACATATCTTACACTAGTTACGGAACGGCAATaGACGTCAGTTGATCCCTCCTTCACATTGAACAAG +
Preference number: 3 (lower is better)
Translates to: TYTYLTLVTERQ*TSVDPSFTLNK
Trigger: CTTGTTCAATGTGAAGGAGGGATCAACTGACGTTCATTGCCGTTCCGTAACTAGTGTAAGATATGTATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR TCA 72 bp AGTAAACCCAAAATCATAGCGGACATTGAACTTTGCTaGCTTGACAGTTTCAGAACTGTTTGGTGCCAATTT +
Preference number: 3 (lower is better)
Translates to: SKPKIIADIELC*LDSFRTVWCQF
Trigger: AAATTGGCACCAAACAGTTCTGAAACTGTCAAGTCAGCAAAGTTCAATGTCCGCTATGATTTTGGGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR-3UTR CAA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAATTGAACTTTGCTGACTaGACAGTTTCAGAACTGTTT +
Preference number: 3 (lower is better)
Translates to: ITCQKVTDIQNMGICVYELNFAD*TVSELF
Trigger: AAACAGTTCTGAAACTGTCAAGTCAGCAAAGTTCAA...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGCAGCTGAGCGTGAGCTaGCGCAGGTTGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQQLSVS*RRLLRS
Trigger: GCTGCGGAGCAACCTGCGCCAGCTCACGCTCAGCTG...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGCCTCTACCAAAGGGGTaGTGGCTTGCCATGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQPLPKG*WLAMRS
Trigger: GGACCGCATGGCAAGCCATCACCCCTTTGGTAGAGG...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGGCACAGCGATCTGGTTaGCCTGGAGCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQAQRSG*PGAPAP
Trigger: AGGAGCTGGTGCTCCAGGGCAACCAGATCGCTGTGC...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCTGCTCCGCAGCTTCCTaGCTCTCAGGGCGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSCSAAS*LSGRRP
Trigger: GGGACGCCGCCCTGAGAGCCAGGAAGCTGCGGAGCA...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCCATCAGGAGCAGCTTaGGCCGGGGCTGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPPSGAA*AGAARL
Trigger: CAGCCGTGCAGCCCCGGCTCAAGCTGCTCCTGATGG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCGGGCCCCCACCCGATaGAAGAAGGAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPRAPTR*KKEPTV
Trigger: CACCGTGGGCTCCTTCTTGCATCGGGTGGGGGCCCG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGAAGGAATCTGGCAGATaGGCCAGCCGGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQKESGR*ASRLKL
Trigger: CAGCTTCAACCGGCTGGCGCATCTGCCAGATTCCTT...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTGGCCTCGCAGCCGGTTaGTGGAGACGTCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPGLAAG*WRRRAP
Trigger: AGGAGCTCGACGTCTCCAGCAACCGGCTGCGAGGCC...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGGCTGGCAACTGGTTGTaGCTCAGGTTGAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQAGNWL*LRLSLR
Trigger: GCGCAAACTCAACCTGAGCCACAACCAGTTGCCAGC...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGCCATCAGGAGCAGCTTaGGCCGGGGCTGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLPSGAA*AGAARL
Trigger: CAGCCGTGCAGCCCCGGCTCAAGCTGCTCCTGATGG...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAAGCCCGGAGTGGGTCCTaGCCCGGGCTGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKARSGS*PGLGTA
Trigger: AGCAGTGCCCAGCCCGGGTCAGGACCCACTCCGGGC...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCGCCCGGAGTGGGTCCTaGCCCGGGCTGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCARSGS*PGLGTA
Trigger: AGCAGTGCCCAGCCCGGGTCAGGACCCACTCCGGGC...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTGGCTGCACGGCTGGCTaGGAATGCGCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPGCTAG*ECASSF
Trigger: GAAGGAACTGGCGCATTCGCAGCCAGCCGTGCAGCC...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTAGCTTGAGCCGGGGCTaGACGGCTGGCTGCGAATGC +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKISLSRG*TAGCEC
Trigger: GCATTCGCAGCCAGCCGTGCAGCCCCGGCTCAAGCT...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTTCAGTCAGACCTGCCTaGAGGCCCAGGCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKISVRPA*RPRRAE
Trigger: CTCTGCCCGCCTGGGCCTGCAGGCAGGTCTGACTGA...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCCTACCCGGGAGAGCTaGCCAAAGTTGTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPPTRES*PKLSGS
Trigger: GCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGG...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGCCGGGGCTGCACGGCTaGCTGCGAATGCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLPGLHG*LRMRQF
Trigger: GAACTGGCGCATTCGCAGCCAGCCGTGCAGCCCCGG...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTAGGCTGCGTGAGGGCTaGCAGAGCGCAGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPRLREG*QSAARS
Trigger: ACTTCGAGCTGCGCTCTGCCAGCCCTCACGCAGCCT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTCCTTCTGGCCTGGGCTaGCTCAGCAACTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIPSGLG*LSNSPG
Trigger: CCCAGGGGAGTTGCTGAGCCAGCCCAGGCCAGAAGG...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCTCTGCCACCCCTTCTaGCCTGGGCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPLCHPF*PGLAQQ
Trigger: TTGCTGAGCCAGCCCAGGCCAGAAGGGGTGGCAGAG...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCTGCCACCCCTTCTaGCCTGGGCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPLCHPF*PGLAQQ
Trigger: TTGCTGAGCCAGCCCAGGCCAGAAGGGGTGGCAGAG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAGGCTGCACGGCTGGCTaGGAATGCGCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQGCTAG*ECASSF
Trigger: GAAGGAACTGGCGCATTCGCAGCCAGCCGTGCAGCC...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGCTTGAGCCGGGGCTaGACGGCTGGCTGCGAATGC +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLSLSRG*TAGCEC
Trigger: GCATTCGCAGCCAGCCGTGCAGCCCCGGCTCAAGCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTAACACCGTAGTAGGCTaGGTGAGGGCTGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPNTVVG*VRAGRA
Trigger: CGCTCTGCCAGCCCTCACGCAGCCTACTACGGTGTT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGATTAATCCAGGCCTCTaGATGGGGCACCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQINPGL*MGHLIL
Trigger: CAGAATGAGGTGCCCCATGCAGAGGCCTGGATTAAT...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCCCCTGTGCACCACGTaGCTGTTGATCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPPLCTT*LLIWTL
Trigger: CAGTGTCCAGATCAACAGTCACGTGGTGCACAGGGG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCGGGCCCCCACCCGATaGAAGAAGGAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVRAPTR*KKEPTV
Trigger: CACCGTGGGCTCCTTCTTGCATCGGGTGGGGGCCCG...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCAGCCACAGTCGTTGTaGCTGAGGTGGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPQPQSL*LRWLEV
Trigger: CACTTCCAGCCACCTCAGGCACAACGACTGTGGCTG...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATGTCCTCAGTCAGACCTaGCTGCAGGCCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHVLSQT*LQAQAG
Trigger: GCCCGCCTGGGCCTGCAGGCAGGTCTGACTGAGGAC...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCTCAGCCACAAAAGACTaGCCGGCTAGGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSSATKD*PARLVP
Trigger: TGGCACCAACCTAGCCGGGCAGTCTTTTGTGGCTGA...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGGGGCAGATGATCTCTaGCACCCCTTCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLGADDL*HPFWPG
Trigger: CCCAGGCCAGAAGGGGTGGCAGAGATCATCTGCCCC...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCGCAGGAGAAGGAATCTaGCAGATGCGCCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPAGEGI*QMRQPV
Trigger: AACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGC...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGGCTGCGTGAGGGCTaGCAGAGCGCAGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLRLREG*QSAARS
Trigger: ACTTCGAGCTGCGCTCTGCCAGCCCTCACGCAGCCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp CGTCTGGCCTCTAGGAACGCACCCCTCAGCCTCAGTGGTCATGGGTGGAGACAGATGCTCCTTGAGGGCTaGGCTATCCTCAAAATAGAG +
Preference number: 4 (lower is better)
Translates to: RLASRNAPLSLSGHGWRQMLLEG*AILKIE
Trigger: CTCTATTTTGAGGATAGCCCAGCCCTCAAGGAGCAT...CTGTCTCCACCCATGACCACTGAGGCTGAGGGGTGCGTTCCTAGAGGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp TGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTTCTGGGTGGCCCGGAGTaGGTCCTGACCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CINSMKIPQARMSLVSVLLGGPE*VLTRAG
Trigger: CCCAGCCCGGGTCAGGACCCACTCCGGGCCACCCAG...AAGCACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTAGCTGGTCACCTCGATaGCCTTACTACCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPSWSPR*PYYQGE
Trigger: CTCCCCTTGGTAGTAAGGGCATCGAGGTGACCAGCT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTAGTTCCTCCAGTACCTaGCAGGATCGAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPSSSST*QDRGRT
Trigger: AGTCCTGCCTCGATCCTGGCAGGTACTGGAGGAACT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAACAGCCACAGTCGTTGTaGCTGAGGTGGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQQPQSL*LRWLEV
Trigger: CACTTCCAGCCACCTCAGGCACAACGACTGTGGCTG...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGTCAGTCAGACCTGCCTaGAGGCCCAGGCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVSVRPA*RPRRAE
Trigger: CTCTGCCCGCCTGGGCCTGCAGGCAGGTCTGACTGA...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTGGCAGGGCTGGCAACTaGTTGTGGCTCAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIGRAGN*LWLRLS
Trigger: ACTCAACCTGAGCCACAACCAGTTGCCAGCCCTGCC...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATGCTCGCAGAAGCCTCTaGGCAGCGTGCCAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHARRSL*AACQAR
Trigger: CCGAGCTTGGCACGCTGCCCAGAGGCTTCTGCGAGC...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCTCGTCGGGCAGAGCCTaGAGCCCGTTGTTATCTAAC +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPSSGRA*SPLLSN
Trigger: GTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGA...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTCATCCGCTGTCCAGCTaGTCACCTCGATGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIHPLSS*SPRCPY
Trigger: GTAAGGGCATCGAGGTGACCAGCTGGACAGCGGATG...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGCTGGGTGGCCCGGAGTaGGTCCTGACCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTLGGPE*VLTRAG
Trigger: CCCAGCCCGGGTCAGGACCCACTCCGGGCCACCCAG...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATGGGCACGCAGGGCACTaGTATCCTCAGGTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHGHAGH*YPQVGL
Trigger: GAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCC...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCTATCCAGCCACAAGGTaGGAAGCCGACCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RKGNANPLVYTCTHTHETYPATR*EADPAR
Trigger: CCGGGCTGGGTCGGCTTCTCACCTTGTGGCTGGATA...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGTATCCAGCCACAAGGTaGGAAGCCGACCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVYPATR*EADPAR
Trigger: CCGGGCTGGGTCGGCTTCTCACCTTGTGGCTGGATA...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCGCACCACGTGACTGTTaGTCTGGACACTGTAACGTG +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPAPRDC*SGHCNV
Trigger: CACGTTACAGTGTCCAGATCAACAGTCACGTGGTGC...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTAAGGGATCCCCTTCATaGAGACTTCGTAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPKGSPS*RLRKGA
Trigger: AGCCCCCTTACGAAGTCTGCATGAAGGGGATCCCTT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTATGGCTAAGGCCCTCTaGATCGTTCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPMAKAL*IVLLLQ
Trigger: CTGCAGGAGAAGAACGATGCAGAGGGCCTTAGCCAT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCGCTGGCAGAAGCCCATaGAGCAAAAAGCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPAGRSP*SKKPST
Trigger: TGTGGAAGGCTTTTTGCTGCATGGGCTTCTGCCAGC...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATGACAGGGTGTCGGGCTaGAGAACCCCCTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHDRVSG*RTPLAG
Trigger: ACCTGCCAAGGGGGTTCTGCAGCCCGACACCCTGTC...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGGTCGCCTCCGGCCCCTaGGCAGCTGAGCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTVASGP*AAEREL
Trigger: CAGCTCACGCTCAGCTGCCCAGGGGCCGGAGGCGAC...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAACTCGCAGCCGGTTGCTaGAGACGTCGAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKLAAGC*RRRAPP
Trigger: TGGAGGAGCTCGACGTCTCCAGCAACCGGCTGCGAG...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTCGCAGCCGGTTGCTaGAGACGTCGAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHLAAGC*RRRAPP
Trigger: TGGAGGAGCTCGACGTCTCCAGCAACCGGCTGCGAG...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAATCGTCGGGCAGAGCCTaGAGCCCGTTGTTATCTAAC +
Preference number: 4 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQSSGRA*SPLLSN
Trigger: GTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGA...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTCAGTCAGCTCCACAATaGAGTCTGGCAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIQSAPQ*SLAGTG
Trigger: TCCGGTACCTGCCAGACTCCATTGTGGAGCTGACTG...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTCCGGGGCTGCACGGCTaGCTGCGAATGCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCPGLHG*LRMRQF
Trigger: GAACTGGCGCATTCGCAGCCAGCCGTGCAGCCCCGG...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGCATCCGCTGTCCAGCTaGTCACCTCGATGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLHPLSS*SPRCPY
Trigger: GTAAGGGCATCGAGGTGACCAGCTGGACAGCGGATG...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAGCTGCAGAACCCCCTTaGCAGGTCTGTAACTCACCA +
Preference number: 4 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQAAEPP*QVCNSP
Trigger: TGGTGAGTTACAGACCTGCCAAGGGGGTTCTGCAGC...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCCTTCTGGCCTGGGCTaGCTCAGCAACTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHPSGLG*LSNSPV
Trigger: CACAGGGGAGTTGCTGAGCCAGCCCAGGCCAGAAGG...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTTCAGTGGGTTGTCCTTaGTTTTCCACAAGCCTACCC +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPSVGCP*FSTSLP
Trigger: GGGTAGGCTTGTGGAAAATCAAGGACAACCCACTGA...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCAGGGCAATCTGTCGGTaGATGTCCAGACATTTCTCC +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPRAICR*MSRHFS
Trigger: GGAGAAATGTCTGGACATTCACCGACAGATTGCCCT...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTCCGAAGGTTCTTGTCTaGAACACCGTAGTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIPKVLV*NTVVGC
Trigger: GCAGCCTACTACGGTGTTTCAGACAAGAACCTTCGG...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGGCACAGCGATCTGGTTaGCCTGGAGCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVAQRSG*PGAPAP
Trigger: AGGAGCTGGTGCTCCAGGGCAACCAGATCGCTGTGC...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTAAGGGATCCCCTTCATaGAGACTTCGTAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIKGSPS*RLRKGA
Trigger: AGCCCCCTTACGAAGTCTGCATGAAGGGGATCCCTT...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGCTGGTCACCTCGATaGCCTTACTACCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLSWSPR*PYYQGE
Trigger: CTCCCCTTGGTAGTAAGGGCATCGAGGTGACCAGCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCAACACCGTAGTAGGCTaGGTGAGGGCTGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: RKGNANPLVYTCTHTHETNTVVG*VRAGRA
Trigger: CGCTCTGCCAGCCCTCACGCAGCCTACTACGGTGTT...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAGCTCCAGCAGGAGCTaGAAGTCCTGTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHSSSRS*KSCWAW
Trigger: CCAGGCCCAACAGGACTTGCAGCTCCTGCTGGAGCT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGTCAGCCACAAAAGACTaGCCGGCTAGGTTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLSATKD*PARLVP
Trigger: TGGCACCAACCTAGCCGGGCAGTCTTTTGTGGCTGA...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp AGAGGTTTCAAAACAATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGGGGGCAGATGATCTCTaGCACCCCTTCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGFKTMVLLGPWLQTSSKGADDL*HPFWPG
Trigger: CCCAGGCCAGAAGGGGTGGCAGAGATCATCTGCCCC...CTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCATTGTTTTGAAACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGCAACCGAATGATGTaGGCTGGCAGAAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLSNRMM*AGRSPC
Trigger: GCATGGGCTTCTGCCAGCCCACATCATTCGGTTGCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTATTCTGCACGTAGCATaGGAACTTGTACCATGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPILHVA*ELVPCR
Trigger: GCGGCATGGTACAAGTTCCCATGCTACGTGCAGAAT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAAACGCATGGCTGGCAATaGACAGGGTGTCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKTHGWQ*TGCRAA
Trigger: TGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGT...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp TGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTTGGGCACGCAGGGCACTaGTATCCTCAGGTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CINSMKIPQARMSLVSVLGHAGH*YPQVGL
Trigger: GAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCC...AAGCACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGCTAAGTCATACACAATaGACCGCAAGCCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLLSHTQ*TASPGK
Trigger: CTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAG...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTTGGTTAAGCAAGTATTaGAAATGGGCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPWLSKY*KWALRL
Trigger: GAGGCGCAAGGCCCATTTTCAATACTTGCTTAACCA...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCATTGAAAATGGGCCTTaGGCCTCCGAAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPIENGP*ASEGSC
Trigger: ACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAAT...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCGCTCGCAGAAGCCTCTaGGCAGCGTGCCAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFARRSL*AACQAR
Trigger: CCGAGCTTGGCACGCTGCCCAGAGGCTTCTGCGAGC...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp TGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTTCCTACCCGGGAGAGCTaGCCAAAGTTGTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CINSMKIPQARMSLVSVLPTRES*PKLSGS
Trigger: GCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGG...AAGCACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATATCCAGGCCTCTGCATaGGGCACCTCATTCTGCACG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHIQASA*GTSFCT
Trigger: CGTGCAGAATGAGGTGCCCCATGCAGAGGCCTGGAT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTGAAAGCGTGTGGATTTaGCGACCCTCTCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIESVWI*RPSLKA
Trigger: TGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTC...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp AGAGGTTTCAAAACAATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGGGGTCCGAAGGTGGTTaGGGCAGGAGAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: RGFKTMVLLGPWLQTSSKGSEGG*GRRRNL
Trigger: CAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCC...CTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCATTGTTTTGAAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CCCTCCTTCACATTGAACAAGAAACTGAAATCTGAGTGCCGCCTGGCCTGGAGCCGTTGTTATCTAACATaGGGCTCTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSFTLNKKLKSECRLAWSRCYLT*GSPNWP
Trigger: TGGCCAGTTTGGAGAGCCTCATGTTAGATAACAACG...GCTCCAGGCCAGGCGGCACTCAGATTTCAGTTTCTTGTTCAATGTGAAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCATAGGTGGCCAAGTTaGCCACGAGCACATACAGGG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHHRWPS*PRAHTG
Trigger: CCCTGTATGTGCTCGTGGTCAACTTGGCCACCTATG...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCTGTTGGGCCTGGACATaGGGCTTAAGCAGCAACCGA +
Preference number: 4 (lower is better)
Translates to: RKGNANPLVYTCTHTHETCWAWT*GLSSNR
Trigger: TCGGTTGCTGCTTAAGCCTCATGTCCAGGCCCAACA...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGTGTTGGGCCTGGACATaGGGCTTAAGCAGCAACCGA +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVCWAWT*GLSSNR
Trigger: TCGGTTGCTGCTTAAGCCTCATGTCCAGGCCCAACA...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAATGCCTTTGGGTTTATTaGGGCAGTAACAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQCLWVY*GSNRVP
Trigger: TGGGACTCTGTTACTGCCTCAATAAACCCAAAGGCA...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTTGCCTTTGGGTTTATTaGGGCAGTAACAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GAGDVPVGPMPCINSMKICLWVY*GSNRVP
Trigger: TGGGACTCTGTTACTGCCTCAATAAACCCAAAGGCA...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp CGCCACTGGGGAGTATTAAGAGTTCTAGGAACCAACCTTGAACCTAGCTATGGAGACCTGTGCACCACGTaGCTGTTGATCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: RHWGVLRVLGTNLEPSYGDLCTT*LLIWTL
Trigger: CAGTGTCCAGATCAACAGTCACGTGGTGCACAGGTC...TCCATAGCTAGGTTCAAGGTTGGTTCCTAGAACTCTTAATACTCCCCAGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCATTCTTGGGGCAGATaGTCTCTGCCACCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVHSWGR*SLPPLL
Trigger: CAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAATG...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CCATCTTGGCACAACTCTCATGCAGAATATTGCACCCAGTGTTCACTCATGCTATCACCGTCTTCAGGTTaGCACTGTCCTGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSWHNSHAEYCTQCSLMLSPSSG*HCPGQP
Trigger: TGGCTGGCCAGGACAGTGGCAACCTGAAGACGGTGA...TAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAAGCAGGGTCTTTCCTaGAGCCTTGTGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHKQGLS*SLVAHQ
Trigger: CTGATGGGCCACAAGGCTGCAGGAAAGACCCTGCTT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTAGCTCCAGCAGGAGCTaGAAGTCCTGTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCSSSRS*KSCWAW
Trigger: CCAGGCCCAACAGGACTTGCAGCTCCTGCTGGAGCT...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCCAATGTCCCCGATGTTaGCCGGCAGCACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFQCPRC*PAAPAG
Trigger: CCCAGCTGGTGCTGCCGGCCAACATCGGGGACATTG...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp CCATCTTGGCACAACTCTCATGCAGAATATTGCACCCAGTGTTCACTCATGCTAGGAAAGGCGGTGAGCTaGTTGTGGTCCACGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PSWHNSHAEYCTQCSLMLGKAVS*LWSTSR
Trigger: CCTTGACGTGGACCACAACCAGCTCACCGCCTTTCC...TAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTCCACAATGGAGTCTaGCAGGTACCGGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVLHNGV*QVPDAV
Trigger: AACCGCATCCGGTACCTGCCAGACTCCATTGTGGAG...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATTTTCCTGCAGCCTTGTaGCCCATCAGGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHFPAAL*PIRSSL
Trigger: CAAGCTGCTCCTGATGGGCCACAAGGCTGCAGGAAA...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGTCGTTGTGCCTGAGGTaGCTGGAAGTGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVSLCLR*LEVQFL
Trigger: GAGGAACTGCACTTCCAGCCACCTCAGGCACAACGA...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAGCAACCGAATGATGTaGGCTGGCAGAAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHSNRMM*AGRSPC
Trigger: GCATGGGCTTCTGCCAGCCCACATCATTCGGTTGCT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTTGCGAACAATCCAGGTaGAAAGGTGAAGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPCEQSR*KGEGKT
Trigger: AGTTTTCCCTTCACCTTTCCACCTGGATTGTTCGCA...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
3UTR CAA 72 bp TCCGAGGGAGAGGCTAGCTTTTTCTGTTCTTTGCAGTaGAGTGGGTGGGCAAAAGGACTACGAGAAGAACCC +
Preference number: 4 (lower is better)
Translates to: SEGEASFFCSLQ*SGWAKGLREEP
Trigger: GGGTTCTTCTCGTAGTCCTTTTGCCCACCCACTCAACTGCAAAGAACAGAAAAAGCTAGCCTCTCCCTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCACGGGAGAGAGGATCTaGAACCGGTGGTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCTGERI*NRWLSK
Trigger: CTTGCTTAACCACCGGTTGCAGATCCTCTCTCCCGT...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp ATATTGCACCCAGTGTTCACTCATGCTAGAAGCGTCCAACTGTATAAATTTAAAGTCCTCAGTCAGACCTaGCTGCAGGCCCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ILHPVFTHARSVQLYKFKVLSQT*LQAQAG
Trigger: GCCCGCCTGGGCCTGCAGGCAGGTCTGACTGAGGAC...TTTAAATTTATACAGTTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAGGTTGTGGAAGACATaGTCCTTGAGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHRLWKT*SLRAGL
Trigger: TAGCCCAGCCCTCAAGGAGCATGTCTTCCACAACCT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp CGCCACTGGGGAGTATTAAGAGTTCTAGGAACCAACCTTGAACCTAGCTATGGAGCTGGCAGAAGCCCATaGAGCAAAAAGCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RHWGVLRVLGTNLEPSYGAGRSP*SKKPST
Trigger: TGTGGAAGGCTTTTTGCTGCATGGGCTTCTGCCAGC...TCCATAGCTAGGTTCAAGGTTGGTTCCTAGAACTCTTAATACTCCCCAGTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTGGGAACTTGTACCATaGCGCGGAGCCATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCWELVP*RGAIQR
Trigger: CCTTTGAATGGCTCCGCGGCATGGTACAAGTTCCCA...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCGCGGTGAGCTGGTTGTaGTCCACGTCAAGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFAVSWL*STSRVR
Trigger: TCGGACCCTTGACGTGGACCACAACCAGCTCACCGC...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp CCATCTTGGCACAACTCTCATGCAGAATATTGCACCCAGTGTTCACTCATGCTACAGTCAGCTCCACAATaGAGTCTGGCAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: PSWHNSHAEYCTQCSLMLQSAPQ*SLAGTG
Trigger: TCCGGTACCTGCCAGACTCCATTGTGGAGCTGACTG...TAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGGGGGCTGAATCAGTaGGTTGTCCTTGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPMPCINSMKIPQARMSLRGLNQ*VVLDFP
Trigger: TGGAAAATCAAGGACAACCCACTGATTCAGCCCCCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAATTTGGTAGTGACGCATaGCTGGCAATGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKFGSDA*LAMDRV
Trigger: CACCCTGTCCATTGCCAGCCATGCGTCACTACCAAA...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 72 bp ACCAGCCCCATCTTGGCACAACTCTCATGCAGAATATaGCACCCAGTGTTCACTCATGCTAGAAGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSPILAQLSCRI*HPVFTHARSVQ
Trigger: TTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGGGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 72 bp AGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTaGACATGTTTCCTGTCAACACACGGAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RADTLFLWGTVS*TCFLSTHGGGG
Trigger: TCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTCATAGGTGGCCAAGTTaGCCACGAGCACATACAGGG +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCHRWPS*PRAHTG
Trigger: CCCTGTATGTGCTCGTGGTCAACTTGGCCACCTATG...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTGGAAGACATGCTCCTTaGGGGCTGGGCTATCCTCAA +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCGRHAP*GLGYPQ
Trigger: TTGAGGATAGCCCAGCCCTCAAGGAGCATGTCTTCC...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp TGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTTGGAAGACATGCTCCTTaGGGGCTGGGCTATCCTCAA +
Preference number: 4 (lower is better)
Translates to: CINSMKIPQARMSLVSVLGRHAP*GLGYPQ
Trigger: TTGAGGATAGCCCAGCCCTCAAGGAGCATGTCTTCC...AAGCACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp GGAACAGTCAGTTTGACATGTTTCCTGTCAACACACGGAGGAGGCGGATGTAAAAGTCCAGGCCATTCCTaGAGTAGGACATTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GTVSLTCFLSTHGGGGCKSPGHS*SRTFSS
Trigger: GGAACTGAATGTCCTACTTCAGGAATGGCCTGGACT...TTTACATCCGCCTCCTCCGTGTGTTGACAGGAAACATGTCAAACTGACTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTATCCAGGGCAGCCAGCTaGAGCAGCTGCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LKIRGNCLCCDILGVNILSRAAS*SSCWGK
Trigger: CTTTCCCCAGCAGCTGCTGCAGCTGGCTGCCCTGGA...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGTTCCTTCTGGTAGGCTaGGATGTAAGGGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVFLLVG*DVRDPL
Trigger: AAGGGGATCCCTTACATCGCAGCCTACCAGAAGGAA...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCATTAATCCAGGCCTCTaGATGGGGCACCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCINPGL*MGHLIL
Trigger: CAGAATGAGGTGCCCCATGCAGAGGCCTGGATTAAT...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCATCCAGGCCTCTGCATaGGGCACCTCATTCTGCACG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFIQASA*GTSFCT
Trigger: CGTGCAGAATGAGGTGCCCCATGCAGAGGCCTGGAT...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCCGTTGTTATCTAACATaGGGCTCTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCRCYLT*GSPNWP
Trigger: TGGCCAGTTTGGAGAGCCTCATGTTAGATAACAACG...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp AGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCCTGCTAAGTCATACACAATaGACCGCAAGCCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRADTLFLWGTVSLTCFLLSHTQ*TASPGK
Trigger: CTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAG...CAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTCCGAAGGTTCTTGTCTaGAACACCGTAGTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCPKVLV*NTVVGC
Trigger: GCAGCCTACTACGGTGTTTCAGACAAGAACCTTCGG...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GCCTCAGTGGTCATGGGTGGAGACAGAACAGCTATCATTCTACCACCATGTCCACTATATGCAAAGATCTaGAATTTCCCATCCGACCTG +
Preference number: 4 (lower is better)
Translates to: ASVVMGGDRTAIILPPCPLYAKI*NFPSDL
Trigger: CAGGTCGGATGGGAAATTTCAGATCTTTGCATATAG...TGGACATGGTGGTAGAATGATAGCTGTTCTGTCTCCACCCATGACCACTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp AGAGGTTTCAAAACAATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGTTCCTTCTGGTAGGCTaGGATGTAAGGGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: RGFKTMVLLGPWLQTSSKFLLVG*DVRDPL
Trigger: AAGGGGATCCCTTACATCGCAGCCTACCAGAAGGAA...CTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCATTGTTTTGAAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCATTGAAAATGGGCCTTaGGCCTCCGAAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCIENGP*ASEGSC
Trigger: ACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAAT...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTTCAAGGGTCCGAAGGTaGTTGAGGCAGGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCSRVRR*LRQEKE
Trigger: TTCCTTCTCCTGCCTCAACCACCTTCGGACCCTTGA...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGCTCCACAATGGAGTCTaGCAGGTACCGGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTLHNGV*QVPDAV
Trigger: AACCGCATCCGGTACCTGCCAGACTCCATTGTGGAG...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCTTTCCTGCAGCCTTGTaGCCCATCAGGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFFPAAL*PIRSSL
Trigger: CAAGCTGCTCCTGATGGGCCACAAGGCTGCAGGAAA...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGTCGTTGTGCCTGAGGTaGCTGGAAGTGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTSLCLR*LEVQFL
Trigger: GAGGAACTGCACTTCCAGCCACCTCAGGCACAACGA...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATATGCTCCTTGAGGGCTaGGCTATCCTCAAAATAGAG +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHMLLEG*AILKIE
Trigger: CTCTATTTTGAGGATAGCCCAGCCCTCAAGGAGCAT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR TCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTAGGGCAATCTGTCGGTaGATGTCCAGACATTTCTCC +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCRAICR*MSRHFS
Trigger: GGAGAAATGTCTGGACATTCACCGACAGATTGCCCT...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp CCATCTTGGCACAACTCTCATGCAGAATATTGCACCCAGTGTTCACTCATGCTATGGTTAAGCAAGTATTaGAAATGGGCCTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PSWHNSHAEYCTQCSLMLWLSKY*KWALRL
Trigger: GAGGCGCAAGGCCCATTTTCAATACTTGCTTAACCA...TAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCGCACCACGTGACTGTTaGTCTGGACACTGTAACGTG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFAPRDC*SGHCNV
Trigger: CACGTTACAGTGTCCAGATCAACAGTCACGTGGTGC...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCATGGCTAAGGCCCTCTaGATCGTTCTTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFMAKAL*IVLLLQ
Trigger: CTGCAGGAGAAGAACGATGCAGAGGGCCTTAGCCAT...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGTGGGAACTTGTACCATaGCGCGGAGCCATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTWELVP*RGAIQR
Trigger: CCTTTGAATGGCTCCGCGGCATGGTACAAGTTCCCA...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAAAGGGGTGATGGCTTaGCATGCGGTCCATATATTT +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHKGVMA*HAVHIF
Trigger: AAATATATGGACCGCATGGCAAGCCATCACCCCTTT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTATTCTGCACGTAGCATaGGAACTTGTACCATGCCGC +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCILHVA*ELVPCR
Trigger: GCGGCATGGTACAAGTTCCCATGCTACGTGCAGAAT...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTGCGAACAATCCAGGTaGAAAGGTGAAGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCCEQSR*KGEGKT
Trigger: AGTTTTCCCTTCACCTTTCCACCTGGATTGTTCGCA...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTAGTAGTGACGCATGGCTaGCAATGGACAGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LKIRGNCLCCDILGVNILVVTHG*QWTGCR
Trigger: CCGACACCCTGTCCATTGCCAGCCATGCGTCACTAC...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCTCAGTGGGTTGTCCTTaGTTTTCCACAAGCCTACCC +
Preference number: 4 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFSVGCP*FSTSLP
Trigger: GGGTAGGCTTGTGGAAAATCAAGGACAACCCACTGA...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR TCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTACATTCTTGGGGCAGATaGTCTCTGCCACCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKIRGNCLCCDILGVNILHSWGR*SLPPLL
Trigger: CAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAATG...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTAAAGCAGGGTCTTTCCTaGAGCCTTGTGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LKIRGNCLCCDILGVNILKQGLS*SLVAHQ
Trigger: CTGATGGGCCACAAGGCTGCAGGAAAGACCCTGCTT...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp AACACAGTCCTTTACAGTCTTCAGAGAATGTGTCTCTACTGCAACACGTGCTGTAGGGGGCTGAATCAGTaGGTTGTCCTTGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: NTVLYSLQRMCLYCNTCCRGLNQ*VVLDFP
Trigger: TGGAAAATCAAGGACAACCCACTGATTCAGCCCCCT...ACAGCACGTGTTGCAGTAGAGACACATTCTCTGAAGACTGTAAAGGACTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 72 bp CTTATTTGTAACGCCTCAAGAAGTGCAGTCGCCTGCTaGTATTCCTTCCTCTTAAAGATTCGTGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: LICNASRSAVAC*YSFLLKIRGNC
Trigger: GCAGTTGCCACGAATCTTTAAGAGGAAGGAATACAAGCAGGCGACTGCACTTCTTGAGGCGTTACAAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp ATATTGCACCCAGTGTTCACTCATGCTAGAAGCGTCCAACTGTATAAATTTAAAAGTTCCTCCAGTACCTaGCAGGATCGAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: ILHPVFTHARSVQLYKFKSSSST*QDRGRT
Trigger: AGTCCTGCCTCGATCCTGGCAGGTACTGGAGGAACT...TTTAAATTTATACAGTTGGACGCTTCTAGCATGAGTGAACACTGGGTGCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTAAGGTTGTGGAAGACATaGTCCTTGAGGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LKIRGNCLCCDILGVNILRLWKT*SLRAGL
Trigger: TAGCCCAGCCCTCAAGGAGCATGTCTTCCACAACCT...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 72 bp ACAGGTGACAGAGTAAGAAGAGCTGACACACTTTTCTaGTGGGGAACAGTCAGTTTGACATGTTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGDRVRRADTLF*WGTVSLTCFLS
Trigger: TGACAGGAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTACTCTGTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGAATGAAGCATCTCTCTaGAAAAAGACATTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PCINSMKIPQARMSLVSVNEASL*KKTLRM
Trigger: CATCCTCAATGTCTTTTTCCAGAGAGATGCTTCATT...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR GCA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAACTGGCAGGTACCGGATaGGGTTATTATCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ITCQKVTDIQNMGICVYELAGTG*GYYPAT
Trigger: TGTGGCTGGATAATAACCGCATCCGGTACCTGCCAG...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR GCA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATAACTTTCCCTCTATATaGAAAGATCTGAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHNFPSI*KDLKFP
Trigger: GGGAAATTTCAGATCTTTGCATATAGAGGGAAAGTT...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CCA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGAATGAAGCATCTCTCTaGAAAAAGACATTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTNEASL*KKTLRM
Trigger: CATCCTCAATGTCTTTTTCCAGAGAGATGCTTCATT...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
3UTR CAA 72 bp CTGCAAGATTTAGAACTGAACTCAGATTATCTCAAGTaGTTCCAAGATTCGGGTTTTCAGAGATTCGTCACC +
Preference number: 4 (lower is better)
Translates to: LQDLELNSDYLK*FQDSGFQRFVT
Trigger: GGTGACGAATCTCTGAAAACCCGAATCTTGGAACAACTTGAGATAATCTGAGTTCAGTTCTAAATCTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp GACTCCAGTGGGTCGCCTCCGGCCCCTGGGCAGCTGAGCGTGAGCTaGCGCAGGTTGCTCCGCAGCTTCCTGGCTCTCAGGGCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: DSSGSPPAPGQLSVS*RRLLRSFLALRAAS
Trigger: GGACGCCGCCCTGAGAGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTCAGCTGCCCAGGGGCCGGAGGCGACCCACTGGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp CCCAGGATGGTCAACCGGTTGTGGCTGACGTCCAGTTCGGTAAGGTaGTGGCCTAGCTCCGCCACCGCAGGGGGCAGCCGGGCAAAACGG +
Preference number: 5 (lower is better)
Translates to: PRMVNRLWLTSSSVR*WPSSATAGGSRAKR
Trigger: CCGTTTTGCCCGGCTGCCCCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 90 bp TCCCCACACAGGTCCGCATGCGTGCCTACAATACACACCACAGCGTaGGGCACCCGGGCCCCCACCCGATGCAAGAAGGAGCCCACGGTG +
Preference number: 5 (lower is better)
Translates to: SPHRSACVPTIHTTA*GTRAPTRCKKEPTV
Trigger: CACCGTGGGCTCCTTCTTGCATCGGGTGGGGGCCCGGGTGCCTCACGCTGTGGTGTGTATTGTAGGCACGCATGCGGACCTGTGTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp GTGCAGGTAGGAAAGAGCACTCTGGAGCCGGTCCTCAGTCAGACCTaGCTGCAGGCCCAGGCGGGCAGAGTCCCACCAGCTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: VQVGKSTLEPVLSQT*LQAQAGRVPPAQPQ
Trigger: CTGTGGCTGAGCTGGTGGGACTCTGCCCGCCTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTCCAGAGTGCTCTTTCCTACCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp CTCAGGGCGCTCACCACCTCGGCTCCCAGGATGGTCAACCGGTTGTaGCTGACGTCCAGTTCGGTAAGGTGGTGGCCTAGCTCCGCCACC +
Preference number: 5 (lower is better)
Translates to: LRALTTSAPRMVNRL*LTSSSVRWWPSSAT
Trigger: GGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCTGGGAGCCGAGGTGGTGAGCGCCCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 90 bp GCAGCCGGGCAAAACGGTTCCTGCGCAAGACCAAGACGCGAAGGCTaGCCAGAGCTGACCCCAGACCTTCAGGCACATCCTCGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: AAGQNGSCARPRREG*PELTPDLQAHPRGR
Trigger: ACGGCCTCGAGGATGTGCCTGAAGGTCTGGGGTCAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGTTTTGCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 90 bp CAGGCCCAGGCGGGCAGAGTCCCACCAGCTCAGCCACAGTCGTTGTaGCTGAGGTGGCTGGAAGTGCAGTTCCTCCAGTACCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QAQAGRVPPAQPQSL*LRWLEVQFLQYLPG
Trigger: TCCTGGCAGGTACTGGAGGAACTGCACTTCCAGCCACCTCAGGCACAACGACTGTGGCTGAGCTGGTGGGACTCTGCCCGCCTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp AGGATGGTCAACCGGTTGTGGCTGACGTCCAGTTCGGTAAGGTGGTaGCCTAGCTCCGCCACCGCAGGGGGCAGCCGGGCAAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: RMVNRLWLTSSSVRW*PSSATAGGSRAKRF
Trigger: GAACCGTTTTGCCCGGCTGCCCCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp TCCTCGGTGAGGCAATGTCGAAGCAGGGTCTTTCCTGCAGCCTTGTaGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACGGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSVRQCRSRVFPAAL*PIRSSLSRGCTAGC
Trigger: GCAGCCAGCCGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCAGGAAAGACCCTGCTTCGACATTGCCTCACCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 90 bp CCCAGGCGGGCAGAGTCCCACCAGCTCAGCCACAGTCGTTGTGCCTaGGGTGGCTGGAAGTGCAGTTCCTCCAGTACCTGCCAGGATCGA +
Preference number: 5 (lower is better)
Translates to: PRRAESHQLSHSRCA*GGWKCSSSSTCQDR
Trigger: TCGATCCTGGCAGGTACTGGAGGAACTGCACTTCCAGCCACCTCAGGCACAACGACTGTGGCTGAGCTGGTGGGACTCTGCCCGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp AGCCTTGTGGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACGGCTaGCTGCGAATGCGCCAGTTCCTTCTGGTAGGCTGCGATGTAAGG +
Preference number: 5 (lower is better)
Translates to: SLVAHQEQLEPGLHG*LRMRQFLLVGCDVR
Trigger: CCTTACATCGCAGCCTACCAGAAGGAACTGGCGCATTCGCAGCCAGCCGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGCCACAAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp GCGGGCAGAGTCCCACCAGCTCAGCCACAGTCGTTGTGCCTGAGGTaGCTGGAAGTGCAGTTCCTCCAGTACCTGCCAGGATCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AGRVPPAQPQSLCLR*LEVQFLQYLPGSRQ
Trigger: CTGCCTCGATCCTGGCAGGTACTGGAGGAACTGCACTTCCAGCCACCTCAGGCACAACGACTGTGGCTGAGCTGGTGGGACTCTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp GGGCTGCACGGCTGGCTGCGAATGCGCCAGTTCCTTCTGGTAGGCTaGGATGTAAGGGATCCCCTTCATGCAGACTTCGTAAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GLHGWLRMRQFLLVG*DVRDPLHADFVRGL
Trigger: CAGCCCCCTTACGAAGTCTGCATGAAGGGGATCCCTTACATCGCAGCCTACCAGAAGGAACTGGCGCATTCGCAGCCAGCCGTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp CTCCACTTTGTCCTCGGTGAGGCAATGTCGAAGCAGGGTCTTTCCTaGAGCCTTGTGGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LHFVLGEAMSKQGLS*SLVAHQEQLEPGLH
Trigger: GTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCAGGAAAGACCCTGCTTCGACATTGCCTCACCGAGGACAAAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp GGAAAGGCGGTGAGCTGGTTGTGGTCCACGTCAAGGGTCCGAAGGTaGTTGAGGCAGGAGAAGGAATCTGGCAGATGCGCCAGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GKAVSWLWSTSRVRR*LRQEKESGRCASRL
Trigger: CAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCCTTGACGTGGACCACAACCAGCTCACCGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp TCCGAAGGTTCTTGTCTGAAACACCGTAGTAGGCTGCGTGAGGGCTaGCAGAGCGCAGCTCGAAGTCCCGAGCCAGGGCCTCATCCACCA +
Preference number: 5 (lower is better)
Translates to: SEGSCLKHRSRLREG*QSAARSPEPGPHPP
Trigger: TGGTGGATGAGGCCCTGGCTCGGGACTTCGAGCTGCGCTCTGCCAGCCCTCACGCAGCCTACTACGGTGTTTCAGACAAGAACCTTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp CGGTGCTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGTTGCAATTaGAGGGGGTCCCGGCAGCTTACGGGCAACACGGGAGAGAGGATC +
Preference number: 5 (lower is better)
Translates to: RCSATESSLSRRRCN*RGSRQLTGNTGERI
Trigger: GATCCTCTCTCCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp GTCCACGTCAAGGGTCCGAAGGTGGTTGAGGCAGGAGAAGGAATCTaGCAGATGCGCCAGCCGGTTGAAGCTGACATCCAGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VHVKGPKVVEAGEGI*QMRQPVEADIQLLQ
Trigger: CTGGAGGAGCTGGATGTCAGCTTCAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCCTTGACGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 90 bp CCACAAGGTGAGAAGCCGACCCAGCCCGGCGATAAGAGAGGGCACTaGGGTGAGCTGATTGCGACTAAGATAGAGCTCCTCCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: PQGEKPTQPGDKRGH*GELIATKIELLQTS
Trigger: GCTGGTCTGGAGGAGCTCTATCTTAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCCGGGCTGGGTCGGCTTCTCACCTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp ATTTCTCGGTGCTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGTTaGAATTGGAGGGGGTCCCGGCAGCTTACGGGCAACACGGGAGAG +
Preference number: 5 (lower is better)
Translates to: ISRCSATESSLSRRR*NWRGSRQLTGNTGE
Trigger: CTCTCCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp AGCTCGAAGTCCCGAGCCAGGGCCTCATCCACCACCTTGGCTAGATaGCTAAGGCCCTCTGCATCGTTCTTCTCCTGCAGGGCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SSKSRARASSTTLAR*LRPSASFFSCRAIC
Trigger: ACAGATTGCCCTGCAGGAGAAGAACGATGCAGAGGGCCTTAGCCATCTAGCCAAGGTGGTGGATGAGGCCCTGGCTCGGGACTTCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp GGGGTGATGGCTTGCCATGCGGTCCATATATTTGGTAGTGACGCATaGCTGGCAATGGACAGGGTGTCGGGCTGCAGAACCCCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GVMACHAVHIFGSDA*LAMDRVSGCRTPLA
Trigger: TGCCAAGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGTCACTACCAAATATATGGACCGCATGGCAAGCCATCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCACCGTCTTCAGGTaGCCACTGTCCTGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPLTVFR*PLSWPA
Trigger: GGCTGGCCAGGACAGTGGCAACCTGAAGACGGTGAG...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTGTGAGCTGGCGCAGGTaGCTCCGCAGCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GAGDVPVGPMPCINSMKIVSWRR*LRSFLA
Trigger: AGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCAC...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp CTGGAGCACCAGCTCCTCCAGGCCAGTCAGCTCCACAATGGAGTCTaGCAGGTACCGGATGCGGTTATTATCCAGCCACAAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LEHQLLQASQLHNGV*QVPDAVIIQPQGEK
Trigger: CTTCTCACCTTGTGGCTGGATAATAACCGCATCCGGTACCTGCCAGACTCCATTGTGGAGCTGACTGGCCTGGAGGAGCTGGTGCTCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp ATCAGTGGGTTGTCCTTGATTTTCCACAAGCCTACCCGGGAGAGCTaGCCAAAGTTGTCCGGCAGCACAGCGATCTGGTTGCCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ISGLSLIFHKPTRES*PKLSGSTAIWLPWS
Trigger: GCTCCAGGGCAACCAGATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAATCAAGGACAACCCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp ACGCATGGCTGGCAATGGACAGGGTGTCGGGCTGCAGAACCCCCTTaGCAGGTCTGTAACTCACCACCACGGGAACTTTCCCTCTATATG +
Preference number: 5 (lower is better)
Translates to: THGWQWTGCRAAEPP*QVCNSPPRELSLYM
Trigger: CATATAGAGGGAAAGTTCCCGTGGTGGTGAGTTACAGACCTGCCAAGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp AGCATTTTGAGCCTCTGCAGACGGCTGAACTCGTCGGGCAGAGCCTaGAGCCCGTTGTTATCTAACATGAGGCTCTCCAAACTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SILSLCRRLNSSGRA*SPLLSNMRLSKLAS
Trigger: GCTGGCCAGTTTGGAGAGCCTCATGTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp CAGCAAAAAGCCTTCCACATAATGATGAAGCTGGGTGGCCCGGAGTaGGTCCTGACCCGGGCTGGGCACTGCTATAGTGGGGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: QQKAFHIMMKLGGPE*VLTRAGHCYSGETF
Trigger: GAAAGTTTCCCCACTATAGCAGTGCCCAGCCCGGGTCAGGACCCACTCCGGGCCACCCAGCTTCATCATTATGTGGAAGGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp CTTGCCATGCGGTCCATATATTTGGTAGTGACGCATGGCTGGCAATaGACAGGGTGTCGGGCTGCAGAACCCCCTTGGCAGGTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: LAMRSIYLVVTHGWQ*TGCRAAEPPWQVCN
Trigger: GTTACAGACCTGCCAAGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGTCACTACCAAATATATGGACCGCATGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAGTCTTTCCTGCAGCCTaGTGGCCCATCAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQVFPAA*WPIRSS
Trigger: GCTGCTCCTGATGGGCCACAAGGCTGCAGGAAAGAC...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 90 bp AAGCAAGTATTGAAAATGGGCCTTGCGCCTCCGAAGGTTCTTGTCTaGAACACCGTAGTAGGCTGCGTGAGGGCTGGCAGAGCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KQVLKMGLAPPKVLV*NTVVGCVRAGRAQL
Trigger: GAGCTGCGCTCTGCCAGCCCTCACGCAGCCTACTACGGTGTTTCAGACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAATACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp AACTCCTCGAAGAGGTTGGAAGAGAGGTTGAGCATTTTGAGCCTCTaGAGACGGCTGAACTCGTCGGGCAGAGCCTGGAGCCCGTTGTTA +
Preference number: 5 (lower is better)
Translates to: NSSKRLEERLSILSL*RRLNSSGRAWSPLL
Trigger: TAACAACGGGCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGAGAGCTGGCCAAAGTaGTCCGGCAGCACAGCGATC +
Preference number: 5 (lower is better)
Translates to: GPMPCINSMKIPQARMSLESWPK*SGSTAI
Trigger: GATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTC...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTATGAGGCGGGTGAGGTaGTGGAAGACATGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPMRRVR*WKTCSL
Trigger: CAAGGAGCATGTCTTCCACAACCTCACCCGCCTCAT...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTCCCTCCCCCTCTCCATaGGTCCCTAAGAGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPPSPSP*VPKSSL
Trigger: TAAACTGCTCTTAGGGACCAATGGAGAGGGGGAGGG...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGCGCTCGCTGCCATTCTaGGGGCAGATGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GPMPCINSMKIPQARMSLRSLPF*GQMISA
Trigger: GGCAGAGATCATCTGCCCCAAGAATGGCAGCGAGCG...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS TCA 90 bp CCTTCATGCAGACTTCGTAAGGGGGCTGAATCAGTGGGTTGTCCTTaGTTTTCCACAAGCCTACCCGGGAGAGCTGGCCAAAGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: PSCRLRKGAESVGCP*FSTSLPGRAGQSCP
Trigger: CGGACAACTTTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAATCAAGGACAACCCACTGATTCAGCCCCCTTACGAAGTCTGCATGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 90 bp GCTGTATCACCTCATAGCTTTCATCACCGGCTAAGTCATACACAATaGACCGCAAGCCCCGGGAAGCATCCGCTGTCCAGCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: AVSPHSFHHRLSHTQ*TASPGKHPLSSWSP
Trigger: AGGTGACCAGCTGGACAGCGGATGCTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAGCCGGTGATGAAAGCTATGAGGTGATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp GTTCCTCCAGTACCTGCCAGGATCGAGGCAGGACTCGGTGTAAGTTaGGAAAGATTTCTCGGTGCTCAGCTACAGAGAGCAGCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: VPPVPARIEAGLGVS*ERFLGAQLQRAACL
Trigger: GAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCCTCGATCCTGGCAGGTACTGGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGGGCTCCTTGGGTAGAACGAATTCCTCTTGTGCTTAGTGGATGGCCCCTCAGCCAAAGGGGTGATGGCTaGCCATGCGGTCCATATATT +
Preference number: 5 (lower is better)
Translates to: GAPWVERIPLVLSGWPLSQRGDG*PCGPYI
Trigger: AATATATGGACCGCATGGCAAGCCATCACCCCTTTG...GCTGAGGGGCCATCCACTAAGCACAAGAGGAATTCGTTCTACCCAAGGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 90 bp GGCAACACGGGAGAGAGGATCTGCAACCGGTGGTTAAGCAAGTATTaGAAATGGGCCTTGCGCCTCCGAAGGTTCTTGTCTGAAACACCG +
Preference number: 5 (lower is better)
Translates to: GNTGERICNRWLSKY*KWALRLRRFLSETP
Trigger: CGGTGTTTCAGACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAATACTTGCTTAACCACCGGTTGCAGATCCTCTCTCCCGTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp CAGGATCGAGGCAGGACTCGGTGTAAGTTGGGAAAGATTTCTCGGTaGTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGTTGCAATTGG +
Preference number: 5 (lower is better)
Translates to: QDRGRTRCKLGKISR*SATESSLSRRRCNW
Trigger: CCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCCTCGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 90 bp TGCATGGGGCACCTCATTCTGCACGTAGCATGGGAACTTGTACCATaGCGCGGAGCCATTCAAAGGCTTGCCTTTGGGTTTATTGAGGCA +
Preference number: 5 (lower is better)
Translates to: CMGHLILHVAWELVP*RGAIQRLAFGFIEA
Trigger: TGCCTCAATAAACCCAAAGGCAAGCCTTTGAATGGCTCCGCGGCATGGTACAAGTTCCCATGCTACGTGCAGAATGAGGTGCCCCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp ATTAATCCAGGCCTCTGCATGGGGCACCTCATTCTGCACGTAGCATaGGAACTTGTACCATGCCGCGGAGCCATTCAAAGGCTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: INPGLCMGHLILHVA*ELVPCRGAIQRLAF
Trigger: AAAGGCAAGCCTTTGAATGGCTCCGCGGCATGGTACAAGTTCCCATGCTACGTGCAGAATGAGGTGCCCCATGCAGAGGCCTGGATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GCCTCAGTGGTCATGGGTGGAGACAGAACAGCTATCATTCTACCACCATGTCCATGGAAGACATGCTCCTaGAGGGCTGGGCTATCCTCA +
Preference number: 5 (lower is better)
Translates to: ASVVMGGDRTAIILPPCPWKTCS*RAGLSS
Trigger: TGAGGATAGCCCAGCCCTCAAGGAGCATGTCTTCCA...TGGACATGGTGGTAGAATGATAGCTGTTCTGTCTCCACCCATGACCACTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCGACTGCCCGGCTAGGTaGGTGCCATTAATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCDCPAR*VPLIQA
Trigger: GGCCTGGATTAATGGCACCAACCTAGCCGGGCAGTC...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 90 bp TGTACCATGCCGCGGAGCCATTCAAAGGCTTGCCTTTGGGTTTATTaGGGCAGTAACAGAGTCCCATCTTCTCCAACAGCTCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CTMPRSHSKACLWVY*GSNRVPSSPTAPAG
Trigger: TCCTGCTGGAGCTGTTGGAGAAGATGGGACTCTGTTACTGCCTCAATAAACCCAAAGGCAAGCCTTTGAATGGCTCCGCGGCATGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 90 bp ACCAACGTTCTTCTTGGAACAAGGGCTGATCACAGTCGGTGTAGGTaGGTAAACCAAAGCCACATTCACTCGCTCGCTGCCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TNVLLGTRADHSRCR*VNQSHIHSLAAILG
Trigger: CCCAAGAATGGCAGCGAGCGAGTGAATGTGGCTTTGGTTTACCCACCTACACCGACTGTGATCAGCCCTTGTTCCAAGAAGAACGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCATCAGTGGGTTGTCCTaGATTTTCCACAAGCCTACC +
Preference number: 5 (lower is better)
Translates to: EVRVVKHSLHVCSHLPSPISGLS*IFHKPT
Trigger: GGTAGGCTTGTGGAAAATCAAGGACAACCCACTGAT...GGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCTTCCCAGCCCCCTGTGGTTAAGCAAGTATaGAAAATGGGCCTTGCGCCT +
Preference number: 5 (lower is better)
Translates to: GSGCETFAPCLLPSSQPPVVKQV*KMGLAP
Trigger: AGGCGCAAGGCCCATTTTCAATACTTGCTTAACCAC...AGGGGGCTGGGAAGATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp AGAGGTTTCAAAACAATGGTTCTACTAGGACCTTGGCTGCAGACTTCCTCCAAGCGCTCGCTGCCATTCTaGGGGCAGATGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RGFKTMVLLGPWLQTSSKRSLPF*GQMISA
Trigger: GGCAGAGATCATCTGCCCCAAGAATGGCAGCGAGCG...CTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAACCATTGTTTTGAAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 90 bp CAGGCCATTCCTGAAGTAGGACATTCAGTTCCTCTACCAAAGGGGTaGTGGCTTGCCATGCGGTCCATATATTTGGTAGTGACGCATGGC +
Preference number: 5 (lower is better)
Translates to: QAIPEVGHSVPLPKG*WLAMRSIYLVVTHG
Trigger: GCCATGCGTCACTACCAAATATATGGACCGCATGGCAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCTACTTCAGGAATGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp TTGGGCCTGGACATGAGGCTTAAGCAGCAACCGAATGATGTGGGCTaGCAGAAGCCCATGCAGCAAAAAGCCTTCCACATAATGATGAAG +
Preference number: 5 (lower is better)
Translates to: LGLDMRLKQQPNDVG*QKPMQQKAFHIMMK
Trigger: CTTCATCATTATGTGGAAGGCTTTTTGCTGCATGGGCTTCTGCCAGCCCACATCATTCGGTTGCTGCTTAAGCCTCATGTCCAGGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCGAGAGGTTGAGCATTTaGAGCCTCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: RKGNANPLVYTCTHTHETERLSI*SLCRRL
Trigger: CAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTC...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATGAGAGGTTGAGCATTTaGAGCCTCTGCAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHERLSI*SLCRRL
Trigger: CAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTC...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAGGTTGGAAGAGAGGTaGAGCATTTTGAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GPMPCINSMKIPQARMSLRLEER*SILSLC
Trigger: GCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAATCAGTGGGTTGTCCTaGATTTTCCACAAGCCTACC +
Preference number: 5 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQISGLS*IFHKPT
Trigger: GGTAGGCTTGTGGAAAATCAAGGACAACCCACTGAT...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp TGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGCTTGTCTTTCCTGCAGCCTaGTGGCCCATCAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: CINSMKIPQARMSLVSVLVFPAA*WPIRSS
Trigger: GCTGCTCCTGATGGGCCACAAGGCTGCAGGAAAGAC...AAGCACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATTGGAAGACATGCTCCTaGAGGGCTGGGCTATCCTCA +
Preference number: 5 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHWKTCS*RAGLSS
Trigger: TGAGGATAGCCCAGCCCTCAAGGAGCATGTCTTCCA...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCATGAGGCGGGTGAGGTaGTGGAAGACATGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCMRRVR*WKTCSL
Trigger: CAAGGAGCATGTCTTCCACAACCTCACCCGCCTCAT...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GGGGCGGGAGATGTCCCAGTCGGTCCCATGCCCTGTATTAACTCCATGAAAATTCTCTGGAAAAAGACATaGAGGATGTCAATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GAGDVPVGPMPCINSMKILWKKT*RMSMRR
Trigger: CCGCCTCATTGACATCCTCAATGTCTTTTTCCAGAG...AATTTTCATGGAGTTAATACAGGGCATGGGACCGACTGGGACATCTCCCGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCTCCCATCCCTCCCCCTCTCCATaGGTCCCTAAGAGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: DHSSEVRVVKHSLHVCSHPSPSP*VPKSSL
Trigger: TAAACTGCTCTTAGGGACCAATGGAGAGGGGGAGGG...ATGGGAGCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GCCAATGAGGGATGGAGCCCTGAAAGAGGATGCTCCTTTCAGGAAGGCTACCAAGAGCCATTCAAAGGCTaGCCTTTGGGTTTATTGAGG +
Preference number: 5 (lower is better)
Translates to: ANEGWSPERGCSFQEGYQEPFKG*PLGLLR
Trigger: CCTCAATAAACCCAAAGGCAAGCCTTTGAATGGCTC...TTGGTAGCCTTCCTGAAAGGAGCATCCTCTTTCAGGGCTCCATCCCTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 90 bp CTTGGCAGGTCTGTAACTCACCACCACGGGAACTTTCCCTCTATATaGAAAGATCTGAAATTTCCCATCCGACCTGTGCACCACGTGACT +
Preference number: 5 (lower is better)
Translates to: LGRSVTHHHGNFPSI*KDLKFPIRPVHHVT
Trigger: AGTCACGTGGTGCACAGGTCGGATGGGAAATTTCAGATCTTTGCATATAGAGGGAAAGTTCCCGTGGTGGTGAGTTACAGACCTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GTAAGAAGAGCTGACACACTTTTCTTGTGGGGAACAGTCAGTTTGACATGTTTCACATCCTCGAGGCCGTaGTTCCCCAGGTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: VRRADTLFLWGTVSLTCFTSSRP*FPRFST
Trigger: GGTGCTGAACCTGGGGAACAACGGCCTCGAGGATGT...GAAACATGTCAAACTGACTGTTCCCCACAAGAAAAGTGTGTCAGCTCTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp CCATCTTGGCACAACTCTCATGCAGAATATTGCACCCAGTGTTCACTCATGCTAAGGGCTGGCAACTGGTaGTGGCTCAGGTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PSWHNSHAEYCTQCSLMLRAGNW*WLRLSL
Trigger: CAAACTCAACCTGAGCCACAACCAGTTGCCAGCCCT...TAGCATGAGTGAACACTGGGTGCAATATTCTGCATGAGAGTTGTGCCAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGAGATGCGCCAGCCGGTaGAAGCTGACATCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTRCASR*KLTSSS
Trigger: GGAGCTGGATGTCAGCTTCAACCGGCTGGCGCATCT...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GGTCCCATGCCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGAACTCCTCGAAGAGGTaGGAAGAGAGGTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: GPMPCINSMKIPQARMSLNSSKR*EERLSI
Trigger: AATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTT...CAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGGCATGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGGAGAGCTGGCCAAAGTaGTCCGGCAGCACAGCGATC +
Preference number: 5 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTESWPK*SGSTAI
Trigger: GATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTC...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp GTTAGTTGTAAGAATAGAAACCATAACAAACTCGGAGCGCATTTGAGAGGCACGGACTGCCCGGCTAGGTaGGTGCCATTAATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VSCKNRNHNKLGAHLRGTDCPAR*VPLIQA
Trigger: GGCCTGGATTAATGGCACCAACCTAGCCGGGCAGTC...CGTGCCTCTCAAATGCGCTCCGAGTTTGTTATGGTTTCTATTCTTACAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp AGGAAGGGGAATGCTAACCCTCTGGTTTACACTTGCACACATACACATGAGACCATGCGGTCCATATATTaGGTAGTGACGCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: RKGNANPLVYTCTHTHETMRSIY*VVTHGW
Trigger: CCAGCCATGCGTCACTACCAAATATATGGACCGCAT...GGTCTCATGTGTATGTGTGCAAGTGTAAACCAGAGGGTTAGCATTCCCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 90 bp TTGGTCCCTAAGAGCAGTTTATGCAGCAGCAATGAAGCATCTCTCTaGAAAAAGACATTGAGGATGTCAATGAGGCGGGTGAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LVPKSSLCSSNEASL*KKTLRMSMRRVRLW
Trigger: CCACAACCTCACCCGCCTCATTGACATCCTCAATGTCTTTTTCCAGAGAGATGCTTCATTGCTGCTGCATAAACTGCTCTTAGGGACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGGTGGTTAAGCAAGTATaGAAAATGGGCCTTGCGCCT +
Preference number: 5 (lower is better)
Translates to: PCINSMKIPQARMSLVSVVVKQV*KMGLAP
Trigger: AGGCGCAAGGCCCATTTTCAATACTTGCTTAACCAC...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp TTGGAGGATCACAGTTCTGAGGTTCGGGTTGTGAAACATTCGCTCCATGTTTGCCTCTGGAAAAAGACATaGAGGATGTCAATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LEDHSSEVRVVKHSLHVCLWKKT*RMSMRR
Trigger: CCGCCTCATTGACATCCTCAATGTCTTTTTCCAGAG...GCAAACATGGAGCGAATGTTTCACAACCCGAACCTCAGAACTGTGATCCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp CCCTGTATTAACTCCATGAAAATTCCACAGGCGCGGATGTCACTGGTTTCTGTGGAGCCATTCAAAGGCTaGCCTTTGGGTTTATTGAGG +
Preference number: 5 (lower is better)
Translates to: PCINSMKIPQARMSLVSVEPFKG*PLGLLR
Trigger: CCTCAATAAACCCAAAGGCAAGCCTTTGAATGGCTC...CACAGAAACCAGTGACATCCGCGCCTGTGGAATTTTCATGGAGTTAATACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209953.2
CDS-3UTR CAA 90 bp ACCCAGTGTTCACTCATGCTAGAAGCGTCCAACTGTATAAATTTAAATGTATTTTCAATGTCCCCGATGTaGGCCGGCAGCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TQCSLMLEASNCINLNVFSMSPM*AGSTSW
Trigger: CCAGCTGGTGCTGCCGGCCAACATCGGGGACATTGA...AAATACATTTAAATTTATACAGTTGGACGCTTCTAGCATGAGTGAACACTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAATGGCTCAGGTTGAGTTaGCGCAGCTCCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ITCQKVTDIQNMGICVYEWLRLS*RSSLRA
Trigger: CGCCCTGAGGGAGCTGCGCAAACTCAACCTGAGCCA...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp TTAAAGATTCGTGGCAACTGCCTGTGCTGTGACATTCTAGGAGTCAATATTTTAAACTCCTCGAAGAGGTaGGAAGAGAGGTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: LKIRGNCLCCDILGVNILNSSKR*EERLSI
Trigger: AATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTT...TAAAATATTGACTCCTAGAATGTCACAGCACAGGCAGTTGCCACGAATCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS-3UTR CAA 90 bp ATCACTTGTCAGAAAGTAACAGATATTCAGAACATGGGCATCTGTGTTTATGAAAGGTTGGAAGAGAGGTaGAGCATTTTGAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ITCQKVTDIQNMGICVYERLEER*SILSLC
Trigger: GCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCT...TTCATAAACACAGATGCCCATGTTCTGAATATCTGTTACTTTCTGACAAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp GGCGTCGGGGGACTCCAGTGGGTCGCCTCCGGCCCCTaGGCAGCTGAGCGTGAGCTGGCGCAGGTTGCTCCG +
Preference number: 6 (lower is better)
Translates to: GVGGLQWVASGP*AAERELAQVAP
Trigger: CGGAGCAACCTGCGCCAGCTCACGCTCAGCTGCCCAGGGGCCGGAGGCGACCCACTGGAGTCCCCCGACGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 72 bp CCGCCACCGCAGGGGGCAGCCGGGCAAAACGGTTCCTaGGCAAGACCAAGACGCGAAGGCTGCCCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: PPPQGAAGQNGS*ARPRREGCPEL
Trigger: CAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGTTTTGCCCGGCTGCCCCCTGCGGTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 72 bp AGAGCACTCTGGAGCCGGTCCTCAGTCAGACCTGCCTaGAGGCCCAGGCGGGCAGAGTCCCACCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RALWSRSSVRPA*RPRRAESHQLS
Trigger: GCTGAGCTGGTGGGACTCTGCCCGCCTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTCCAGAGTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp AACCGGTTGTGGCTGACGTCCAGTTCGGTAAGGTGGTaGCCTAGCTCCGCCACCGCAGGGGGCAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: NRLWLTSSSVRW*PSSATAGGSRA
Trigger: TGCCCGGCTGCCCCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp GTCAACCGGTTGTGGCTGACGTCCAGTTCGGTAAGGTaGTGGCCTAGCTCCGCCACCGCAGGGGGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: VNRLWLTSSSVR*WPSSATAGGSR
Trigger: CCGGCTGCCCCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp GCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACGGCTaGCTGCGAATGCGCCAGTTCCTTCTGGTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: AHQEQLEPGLHG*LRMRQFLLVGC
Trigger: GCAGCCTACCAGAAGGAACTGGCGCATTCGCAGCCAGCCGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp TCCCTCAGGGCGCTCACCACCTCGGCTCCCAGGATGGTCAACCGGTaGTGGCTGACGTCCAGTTCGGTAAGGTGGTGGCCTAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SLRALTTSAPRMVNR*WLTSSSVRWWPSSA
Trigger: GGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCTGGGAGCCGAGGTGGTGAGCGCCCTGAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 90 bp AGCTGGGCAGGCAGGGCTGGCAACTGGTTGTGGCTCAGGTTGAGTTaGCGCAGCTCCCTCAGGGCGCTCACCACCTCGGCTCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: SWAGRAGNWLWLRLS*RSSLRALTTSAPRM
Trigger: CATCCTGGGAGCCGAGGTGGTGAGCGCCCTGAGGGAGCTGCGCAAACTCAACCTGAGCCACAACCAGTTGCCAGCCCTGCCTGCCCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 90 bp CCTCTGGGCAGCGTGCCAAGCTCGGCCCCGCTAAGCCAGAGGATCTaGAGGGCACGCAGGGCACTGATATCCTCAGGTAGGCCTCGCAGC +
Preference number: 6 (lower is better)
Translates to: PLGSVPSSAPLSQRI*RARRALISSGRPRS
Trigger: GCTGCGAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGATCCTCTGGCTTAGCGGGGCCGAGCTTGGCACGCTGCCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp GGCAGGGCTGGCAACTGGTTGTGGCTCAGGTTGAGTTaGCGCAGCTCCCTCAGGGCGCTCACCACCTCGGCT +
Preference number: 6 (lower is better)
Translates to: GRAGNWLWLRLS*RSSLRALTTSA
Trigger: AGCCGAGGTGGTGAGCGCCCTGAGGGAGCTGCGCAAACTCAACCTGAGCCACAACCAGTTGCCAGCCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 72 bp AGGTCCGCATGCGTGCCTACAATACACACCACAGCGTaGGGCACCCGGGCCCCCACCCGATGCAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RSACVPTIHTTA*GTRAPTRCKKE
Trigger: CTCCTTCTTGCATCGGGTGGGGGCCCGGGTGCCTCACGCTGTGGTGTGTATTGTAGGCACGCATGCGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp GCGCTCACCACCTCGGCTCCCAGGATGGTCAACCGGTaGTGGCTGACGTCCAGTTCGGTAAGGTGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: ALTTSAPRMVNR*WLTSSSVRWWP
Trigger: AGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCTGGGAGCCGAGGTGGTGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 90 bp AGGTGGTTGAGGCAGGAGAAGGAATCTGGCAGATGCGCCAGCCGGTaGAAGCTGACATCCAGCTCCTCCAGGTGGGCGAGGGCACCCAGC +
Preference number: 6 (lower is better)
Translates to: RWLRQEKESGRCASR*KLTSSSSRWARAPS
Trigger: GCTGGGTGCCCTCGCCCACCTGGAGGAGCTGGATGTCAGCTTCAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 90 bp GCAGAGCGCAGCTCGAAGTCCCGAGCCAGGGCCTCATCCACCACCTaGGCTAGATGGCTAAGGCCCTCTGCATCGTTCTTCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AERSSKSRARASSTT*ARWLRPSASFFSCR
Trigger: CCTGCAGGAGAAGAACGATGCAGAGGGCCTTAGCCATCTAGCCAAGGTGGTGGATGAGGCCCTGGCTCGGGACTTCGAGCTGCGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp GCGGGCAGAGTCCCACCAGCTCAGCCACAGTCGTTGTaGCTGAGGTGGCTGGAAGTGCAGTTCCTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: AGRVPPAQPQSL*LRWLEVQFLQY
Trigger: GTACTGGAGGAACTGCACTTCCAGCCACCTCAGGCACAACGACTGTGGCTGAGCTGGTGGGACTCTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp CACTCGCTCGCTGCCATTCTTGGGGCAGATGATCTCTaGCACCCCTTCTGGCCTGGGCTGGCTCAGCAACTC +
Preference number: 6 (lower is better)
Translates to: HSLAAILGADDL*HPFWPGLAQQL
Trigger: GAGTTGCTGAGCCAGCCCAGGCCAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAATGGCAGCGAGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp CTCACCACCTCGGCTCCCAGGATGGTCAACCGGTTGTaGCTGACGTCCAGTTCGGTAAGGTGGTGGCCTAGC +
Preference number: 6 (lower is better)
Translates to: LTTSAPRMVNRL*LTSSSVRWWPS
Trigger: GCTAGGCCACCACCTTACCGAACTGGACGTCAGCCACAACCGGTTGACCATCCTGGGAGCCGAGGTGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp AGGCAATGTCGAAGCAGGGTCTTTCCTGCAGCCTTGTaGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACG +
Preference number: 6 (lower is better)
Translates to: RQCRSRVFPAAL*PIRSSLSRGCT
Trigger: CGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCAGGAAAGACCCTGCTTCGACATTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp TCTTGTCTGAAACACCGTAGTAGGCTGCGTGAGGGCTaGCAGAGCGCAGCTCGAAGTCCCGAGCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SCLKHRSRLREG*QSAARSPEPGP
Trigger: AGGCCCTGGCTCGGGACTTCGAGCTGCGCTCTGCCAGCCCTCACGCAGCCTACTACGGTGTTTCAGACAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp AGGCAGGAGAAGGAATCTGGCAGATGCGCCAGCCGGTaGAAGCTGACATCCAGCTCCTCCAGGTGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: RQEKESGRCASR*KLTSSSSRWAR
Trigger: CCTCGCCCACCTGGAGGAGCTGGATGTCAGCTTCAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 72 bp AGCGTGCCAAGCTCGGCCCCGCTAAGCCAGAGGATCTaGAGGGCACGCAGGGCACTGATATCCTCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: SVPSSAPLSQRI*RARRALISSGR
Trigger: CCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGATCCTCTGGCTTAGCGGGGCCGAGCTTGGCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp GCAGAGTCCCACCAGCTCAGCCACAGTCGTTGTGCCTaGGGTGGCTGGAAGTGCAGTTCCTCCAGTACCTGC +
Preference number: 6 (lower is better)
Translates to: AESHQLSHSRCA*GGWKCSSSSTC
Trigger: GCAGGTACTGGAGGAACTGCACTTCCAGCCACCTCAGGCACAACGACTGTGGCTGAGCTGGTGGGACTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp GCTACAGAGAGCAGCTTGTCTCGAAGGCGTTGCAATTaGAGGGGGTCCCGGCAGCTTACGGGCAACACGGGA +
Preference number: 6 (lower is better)
Translates to: ATESSLSRRRCN*RGSRQLTGNTG
Trigger: TCCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp GCAGCAAAAAGCCTTCCACATAATGATGAAGCTGGGTaGCCCGGAGTGGGTCCTGACCCGGGCTGGGCACTG +
Preference number: 6 (lower is better)
Translates to: AAKSLPHNDEAG*PGVGPDPGWAL
Trigger: CAGTGCCCAGCCCGGGTCAGGACCCACTCCGGGCCACCCAGCTTCATCATTATGTGGAAGGCTTTTTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp AGCTACAGAGAGCAGCTTGTCTCGAAGGCGTTGCAATaGGAGGGGGTCCCGGCAGCTTACGGGCAACACGGG +
Preference number: 6 (lower is better)
Translates to: SYREQLVSKALQ*EGVPAAYGQHG
Trigger: CCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp AAGGCGGTGAGCTGGTTGTGGTCCACGTCAAGGGTCCGAAGGTGGTaGAGGCAGGAGAAGGAATCTGGCAGATGCGCCAGCCGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: KAVSWLWSTSRVRRW*RQEKESGRCASRLK
Trigger: CTTCAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCCTTGACGTGGACCACAACCAGCTCACCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 90 bp TCGGTGCTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGTTGCAATaGGAGGGGGTCCCGGCAGCTTACGGGCAACACGGGAGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: SVLSYREQLVSKALQ*EGVPAAYGQHGRED
Trigger: ATCCTCTCTCCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp CAAAACGGTTCCTGCGCAAGACCAAGACGCGAAGGCTaGCCAGAGCTGACCCCAGACCTTCAGGCACATCCT +
Preference number: 6 (lower is better)
Translates to: QNGSCARPRREG*PELTPDLQAHP
Trigger: AGGATGTGCCTGAAGGTCTGGGGTCAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp GTGAGCTGGTTGTGGTCCACGTCAAGGGTCCGAAGGTaGTTGAGGCAGGAGAAGGAATCTGGCAGATGCGCC +
Preference number: 6 (lower is better)
Translates to: VSWLWSTSRVRR*LRQEKESGRCA
Trigger: GGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCCTTGACGTGGACCACAACCAGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp TGGCAATGGACAGGGTGTCGGGCTGCAGAACCCCCTTaGCAGGTCTGTAACTCACCACCACGGGAACTTTCC +
Preference number: 6 (lower is better)
Translates to: WQWTGCRAAEPP*QVCNSPPRELS
Trigger: GGAAAGTTCCCGTGGTGGTGAGTTACAGACCTGCCAAGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 72 bp ATTTTCCACAAGCCTACCCGGGAGAGCTGGCCAAAGTaGTCCGGCAGCACAGCGATCTGGTTGCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: IFHKPTRESWPK*SGSTAIWLPWS
Trigger: GCTCCAGGGCAACCAGATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp AGCCTCTGCAGACGGCTGAACTCGTCGGGCAGAGCCTGGAGCCCGTaGTTATCTAACATGAGGCTCTCCAAACTGGCCAGCTCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SLCRRLNSSGRAWSP*LSNMRLSKLASSQK
Trigger: CTTCTGCGAGCTGGCCAGTTTGGAGAGCCTCATGTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp GCAGCAGGGAACTCCTCGAAGAGGTTGGAAGAGAGGTTGAGCATTTaGAGCCTCTGCAGACGGCTGAACTCGTCGGGCAGAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AAGNSSKRLEERLSI*SLCRRLNSSGRAWS
Trigger: GCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTTCCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp TTGTCCTTGATTTTCCACAAGCCTACCCGGGAGAGCTGGCCAAAGTaGTCCGGCAGCACAGCGATCTGGTTGCCCTGGAGCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSLIFHKPTRESWPK*SGSTAIWLPWSTSS
Trigger: GGAGCTGGTGCTCCAGGGCAACCAGATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAATCAAGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp GATTTCTCGGTGCTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGTaGCAATTGGAGGGGGTCCCGGCAGCTTACGGGCAACACGGGAGA +
Preference number: 6 (lower is better)
Translates to: DFSVLSYREQLVSKA*QLEGVPAAYGQHGR
Trigger: TCTCCCGTGTTGCCCGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp GAGAAGCCGACCCAGCCCGGCGATAAGAGAGGGCACTaGGGTGAGCTGATTGCGACTAAGATAGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: EKPTQPGDKRGH*GELIATKIELL
Trigger: GAGGAGCTCTATCTTAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCCGGGCTGGGTCGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp AAGGGTCCGAAGGTGGTTGAGGCAGGAGAAGGAATCTaGCAGATGCGCCAGCCGGTTGAAGCTGACATCCAG +
Preference number: 6 (lower is better)
Translates to: KGPKVVEAGEGI*QMRQPVEADIQ
Trigger: CTGGATGTCAGCTTCAACCGGCTGGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTTCGGACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp CGGTCCATATATTTGGTAGTGACGCATGGCTGGCAATaGACAGGGTGTCGGGCTGCAGAACCCCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: RSIYLVVTHGWQ*TGCRAAEPPWQ
Trigger: CTGCCAAGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGTCACTACCAAATATATGGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp GCCATGCGGTCCATATATTTGGTAGTGACGCATGGCTaGCAATGGACAGGGTGTCGGGCTGCAGAACCCCCT +
Preference number: 6 (lower is better)
Translates to: AMRSIYLVVTHG*QWTGCRAAEPP
Trigger: AGGGGGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGTCACTACCAAATATATGGACCGCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 72 bp AGACGGCTGAACTCGTCGGGCAGAGCCTGGAGCCCGTaGTTATCTAACATGAGGCTCTCCAAACTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: RRLNSSGRAWSP*LSNMRLSKLAS
Trigger: GCTGGCCAGTTTGGAGAGCCTCATGTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp AAGAGGTTGGAAGAGAGGTTGAGCATTTTGAGCCTCTaGAGACGGCTGAACTCGTCGGGCAGAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: KRLEERLSILSL*RRLNSSGRAWS
Trigger: GCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp GGCTGGCTGCGAATGCGCCAGTTCCTTCTGGTAGGCTaGGATGTAAGGGATCCCCTTCATGCAGACTTCGTA +
Preference number: 6 (lower is better)
Translates to: GWLRMRQFLLVG*DVRDPLHADFV
Trigger: TACGAAGTCTGCATGAAGGGGATCCCTTACATCGCAGCCTACCAGAAGGAACTGGCGCATTCGCAGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp AGCCTCTGCAGACGGCTGAACTCGTCGGGCAGAGCCTaGAGCCCGTTGTTATCTAACATGAGGCTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: SLCRRLNSSGRA*SPLLSNMRLSK
Trigger: TTTGGAGAGCCTCATGTTAGATAACAACGGGCTCCAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp CAGCTCCTCCAGGCCAGTCAGCTCCACAATGGAGTCTaGCAGGTACCGGATGCGGTTATTATCCAGCCACAA +
Preference number: 6 (lower is better)
Translates to: QLLQASQLHNGV*QVPDAVIIQPQ
Trigger: TTGTGGCTGGATAATAACCGCATCCGGTACCTGCCAGACTCCATTGTGGAGCTGACTGGCCTGGAGGAGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp GCTTGCCATGCGGTCCATATATTTGGTAGTGACGCATaGCTGGCAATGGACAGGGTGTCGGGCTGCAGAACC +
Preference number: 6 (lower is better)
Translates to: ACHAVHIFGSDA*LAMDRVSGCRT
Trigger: GGTTCTGCAGCCCGACACCCTGTCCATTGCCAGCCATGCGTCACTACCAAATATATGGACCGCATGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp CCTGGGCTGGCTCAGCAACTCCCCTGGGAAAGCGTGTaGATTTGGCGACCCTCTCTTAAGGCACTTAGAACA +
Preference number: 6 (lower is better)
Translates to: PGLAQQLPWESV*IWRPSLKALRT
Trigger: TGTTCTAAGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCCAGGGGAGTTGCTGAGCCAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CAA 72 bp GGAAAGATTTCTCGGTGCTCAGCTACAGAGAGCAGCTaGTCTCGAAGGCGTTGCAATTGGAGGGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GKISRCSATESS*SRRRCNWRGSR
Trigger: CCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp CCTCATAGCTTTCATCACCGGCTAAGTCATACACAATaGACCGCAAGCCCCGGGAAGCATCCGCTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: PHSFHHRLSHTQ*TASPGKHPLSS
Trigger: GCTGGACAGCGGATGCTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAGCCGGTGATGAAAGCTATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp TTGAAAATGGGCCTTGCGCCTCCGAAGGTTCTTGTCTaGAACACCGTAGTAGGCTGCGTGAGGGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LKMGLAPPKVLV*NTVVGCVRAGR
Trigger: TCTGCCAGCCCTCACGCAGCCTACTACGGTGTTTCAGACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp TTGTCCTTGATTTTCCACAAGCCTACCCGGGAGAGCTaGCCAAAGTTGTCCGGCAGCACAGCGATCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LSLIFHKPTRES*PKLSGSTAIWL
Trigger: CAACCAGATCGCTGTGCTGCCGGACAACTTTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAATCAAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp GCAGCAGGGAACTCCTCGAAGAGGTTGGAAGAGAGGTaGAGCATTTTGAGCCTCTGCAGACGGCTGAACTCG +
Preference number: 6 (lower is better)
Translates to: AAGNSSKRLEER*SILSLCRRLNS
Trigger: CGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTTCCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp TGTAAGTTGGGAAAGATTTCTCGGTGCTCAGCTACAGAGAGCAGCTaGTCTCGAAGGCGTTGCAATTGGAGGGGGTCCCGGCAGCTTACG +
Preference number: 6 (lower is better)
Translates to: CKLGKISRCSATESS*SRRRCNWRGSRQLT
Trigger: CGTAAGCTGCCGGGACCCCCTCCAATTGCAACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp AGACTTCGTAAGGGGGCTGAATCAGTGGGTTGTCCTTaGTTTTCCACAAGCCTACCCGGGAGAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: RLRKGAESVGCP*FSTSLPGRAGQ
Trigger: TTGGCCAGCTCTCCCGGGTAGGCTTGTGGAAAATCAAGGACAACCCACTGATTCAGCCCCCTTACGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp TCTGCATCGTTCTTCTCCTGCAGGGCAATCTGTCGGTaGATGTCCAGACATTTCTCCTCAAGCTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SASFFSCRAICR*MSRHFSSSSRS
Trigger: GGAGCGGGAGCTTGAGGAGAAATGTCTGGACATTCACCGACAGATTGCCCTGCAGGAGAAGAACGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp CCTTCTGGTAGGCTGCGATGTAAGGGATCCCCTTCATaGAGACTTCGTAAGGGGGCTGAATCAGTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: PSGRLRCKGSPS*RLRKGAESVGC
Trigger: ACAACCCACTGATTCAGCCCCCTTACGAAGTCTGCATGAAGGGGATCCCTTACATCGCAGCCTACCAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp GGCAGGACTCGGTGTAAGTTGGGAAAGATTTCTCGGTaGTCAGCTACAGAGAGCAGCTTGTCTCGAAGGCGT +
Preference number: 6 (lower is better)
Translates to: GRTRCKLGKISR*SATESSLSRRR
Trigger: ACGCCTTCGAGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp GTACCTGCCAGGATCGAGGCAGGACTCGGTGTAAGTTaGGAAAGATTTCTCGGTGCTCAGCTACAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: VPARIEAGLGVS*ERFLGAQLQRA
Trigger: TGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCCTCGATCCTGGCAGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp CTGGCTCAGCAACTCCCCTGGGAAAGCGTGTGGATTTaGCGACCCTCTCTTAAGGCACTTAGAACAGAGGAT +
Preference number: 6 (lower is better)
Translates to: LAQQLPWESVWI*RPSLKALRTED
Trigger: ATCCTCTGTTCTAAGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCCAGGGGAGTTGCTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS CCA 72 bp CTTCTTGGAACAAGGGCTGATCACAGTCGGTGTAGGTaGGTAAACCAAAGCCACATTCACTCGCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLGTRADHSRCR*VNQSHIHSLAA
Trigger: GGCAGCGAGCGAGTGAATGTGGCTTTGGTTTACCCACCTACACCGACTGTGATCAGCCCTTGTTCCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp AACTCCTCGAAGAGGTTGGAAGAGAGGTTGAGCATTTaGAGCCTCTGCAGACGGCTGAACTCGTCGGGCAGA +
Preference number: 6 (lower is better)
Translates to: NSSKRLEERLSI*SLCRRLNSSGR
Trigger: TCTGCCCGACGAGTTCAGCCGTCTGCAGAGGCTCAAAATGCTCAACCTCTCTTCCAACCTCTTCGAGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp AGTACCTGCCAGGATCGAGGCAGGACTCGGTGTAAGTaGGGAAAGATTTCTCGGTGCTCAGCTACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: STCQDRGRTRCK*GKISRCSATES
Trigger: GCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCCTCGATCCTGGCAGGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp AGTTCCTCCAGTACCTGCCAGGATCGAGGCAGGACTCGGTGTAAGTaGGGAAAGATTTCTCGGTGCTCAGCTACAGAGAGCAGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SSSSTCQDRGRTRCK*GKISRCSATESSLS
Trigger: AGACAAGCTGCTCTCTGTAGCTGAGCACCGAGAAATCTTTCCCAACTTACACCGAGTCCTGCCTCGATCCTGGCAGGTACTGGAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp CACCTCATTCTGCACGTAGCATGGGAACTTGTACCATaGCGCGGAGCCATTCAAAGGCTTGCCTTTGGGTTT +
Preference number: 6 (lower is better)
Translates to: HLILHVAWELVP*RGAIQRLAFGF
Trigger: AAACCCAAAGGCAAGCCTTTGAATGGCTCCGCGGCATGGTACAAGTTCCCATGCTACGTGCAGAATGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 72 bp GGGAGAGAGGATCTGCAACCGGTGGTTAAGCAAGTATaGAAAATGGGCCTTGCGCCTCCGAAGGTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: GREDLQPVVKQV*KMGLAPPKVLV
Trigger: GACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAATACTTGCTTAACCACCGGTTGCAGATCCTCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp GGAGAGAGGATCTGCAACCGGTGGTTAAGCAAGTATTaGAAATGGGCCTTGCGCCTCCGAAGGTTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: GERICNRWLSKY*KWALRLRRFLS
Trigger: AGACAAGAACCTTCGGAGGCGCAAGGCCCATTTTCAATACTTGCTTAACCACCGGTTGCAGATCCTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS TCA 72 bp CCGCGGAGCCATTCAAAGGCTTGCCTTTGGGTTTATTaGGGCAGTAACAGAGTCCCATCTTCTCCAACAGCT +
Preference number: 6 (lower is better)
Translates to: PRSHSKACLWVY*GSNRVPSSPTA
Trigger: AGCTGTTGGAGAAGATGGGACTCTGTTACTGCCTCAATAAACCCAAAGGCAAGCCTTTGAATGGCTCCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp GACATGAGGCTTAAGCAGCAACCGAATGATGTGGGCTaGCAGAAGCCCATGCAGCAAAAAGCCTTCCACATA +
Preference number: 6 (lower is better)
Translates to: DMRLKQQPNDVG*QKPMQQKAFHI
Trigger: TATGTGGAAGGCTTTTTGCTGCATGGGCTTCTGCCAGCCCACATCATTCGGTTGCTGCTTAAGCCTCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS GCA 72 bp AGGACATTCAGTTCCTCTACCAAAGGGGTGATGGCTTaGCATGCGGTCCATATATTTGGTAGTGACGCATGG +
Preference number: 6 (lower is better)
Translates to: RTFSSSTKGVMA*HAVHIFGSDAW
Trigger: CCATGCGTCACTACCAAATATATGGACCGCATGGCAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS TCA 72 bp CCTGAAGTAGGACATTCAGTTCCTCTACCAAAGGGGTaGTGGCTTGCCATGCGGTCCATATATTTGGTAGTG +
Preference number: 6 (lower is better)
Translates to: PEVGHSVPLPKG*WLAMRSIYLVV
Trigger: CACTACCAAATATATGGACCGCATGGCAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCTACTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037666.6
CDS GCA 72 bp CTATATTCGATCTGTAACTGTTCAGCCACAAAAGACTaGCCGGCTAGGTTGGTGCCATTAATCCAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LYSICNCSATKD*PARLVPLIQAS
Trigger: AGAGGCCTGGATTAATGGCACCAACCTAGCCGGGCAGTCTTTTGTGGCTGAACAGTTACAGATCGAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CAA 90 bp AGCAGTTTATGCAGCAGCAATGAAGCATCTCTCTGGAAAAAGACATaGAGGATGTCAATGAGGCGGGTGAGGTTGTGGAAGACATGCTCC +
Preference number: 6 (lower is better)
Translates to: SSLCSSNEASLWKKT*RMSMRRVRLWKTCS
Trigger: GGAGCATGTCTTCCACAACCTCACCCGCCTCATTGACATCCTCAATGTCTTTTTCCAGAGAGATGCTTCATTGCTGCTGCATAAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2
CDS CCA 72 bp AAGAGCAGTTTATGCAGCAGCAATGAAGCATCTCTCTaGAAAAAGACATTGAGGATGTCAATGAGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: KSSLCSSNEASL*KKTLRMSMRRV
Trigger: CACCCGCCTCATTGACATCCTCAATGTCTTTTTCCAGAGAGATGCTTCATTGCTGCTGCATAAACTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037666.6
ENSMUST00000209953.2