Pregenerated sensors for MFGE8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030605Ensembl transcript IDs: ENSMUST00000032825.14, ENSMUST00000107409.5, ENSMUST00000205563.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCCTCAGCCTCTGGCCATCCTCATCGTTTGGGCTGGCAGGACTaGGCATTAACAGCCCAGCAGCTCCAGGCGCAGGGTGATGCGGTT | + |
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Preference number: 1 (lower is better) Translates to: GPSASGHPHRLGWQD*ALTAQQLQAQGDAV Trigger: AACCGCATCACCCTGCGCCTGGAGCTGCTGGGCTGTTAATGCTCAGTCCTGCCAGCCCAAACGATGAGGATGGCCAGAGGCTGAGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR TCA 90 bp | TGCAAGGGTCAAGAGGCGTCTCAGGAGATAAGAGGCAGGACCTGGTaGCCCAAGGGACAGCAAGCGGACGTGGGCCTCTCCTTCCCGGAA | + |
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Preference number: 1 (lower is better) Translates to: CKGQEASQEIRGRTW*PKGQQADVGLSFPE Trigger: TTCCGGGAAGGAGAGGCCCACGTCCGCTTGCTGTCCCTTGGGTCACCAGGTCCTGCCTCTTATCTCCTGAGACGCCTCTTGACCCTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR TCA 90 bp | CTGGCAGGACTGAGCATTAACAGCCCAGCAGCTCCAGGCGCAGGGTaGTGCGGTTATGCCAGGACACTGGAAGGACACGCACGTAGCGAG | + |
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Preference number: 1 (lower is better) Translates to: LAGLSINSPAAPGAG*CGYARTLEGHARSE Trigger: CTCGCTACGTGCGTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGCTGCTGGGCTGTTAATGCTCAGTCCTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CCA 90 bp | CGGACGTGGGCCTCTCCTTCCCGGAATGGAACATGGAGGAATGTGTaGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RTWASPSRNGTWRNV*CAERDGQSGAPFSP Trigger: AGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACACATTCCTCCATGTTCCATTCCGGGAAGGAGAGGCCCACGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR GCA 90 bp | CGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTaGAAGGGTCAAGAGGCGTCTCAGGAGATAAGAGGCAGGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: RPLQTRQSPCQLRLQ*KGQEASQEIRGRTW Trigger: CCAGGTCCTGCCTCTTATCTCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR CCA 90 bp | GCCCAGCAGCTCCAGGCGCAGGGTGATGCGGTTATGCCAGGACACTaGAAGGACACGCACGTAGCGAGCCATGAAGGGTTTCTCGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: AQQLQAQGDAVMPGH*KDTHVASHEGFLED Trigger: ATCTTCGAGAAACCCTTCATGGCTCGCTACGTGCGTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGCTGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR TCA 90 bp | TGCGGTTATGCCAGGACACTGGAAGGACACGCACGTAGCGAGCCATaGAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: CGYARTLEGHARSEP*RVSRRCSSCGSCCP Trigger: TGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCATGGCTCGCTACGTGCGTGTCCTTCCAGTGTCCTGGCATAACCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR GCA 90 bp | TCTTCTTGTGGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTTGCTaGTTCCTTGCTCCTCATATACAGTCCACTGCACACCATCATCAC | + |
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Preference number: 1 (lower is better) Translates to: SSCGSCCPSCPGRPC*FLAPHIQSTAHHHH Trigger: GTGATGATGGTGTGCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAGGAGGCCTGTGGCTCCCCCAGAATGCCTaGGAGAAGGGGGCTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSNSPRMPERRGLAGGLWLPQNA*EKGASR Trigger: CCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAG...CCACAGGCCTCCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR TCA 90 bp | AACCACCCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGCTCCCCCAGAATGCCTaGGAGAAGGGGGCTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NHPEPPTSPDPPVSLSTELPQNA*EKGASR Trigger: CCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAG...CTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGGGTGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAGGAGGCCTGTGGTCCCCTGGCCCTTCCTaGCTCCAGCCCCAGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: LSNSPRMPERRGLAGGLWSPGPS*LQPQYN Trigger: ATTGTACTGGGGCTGGAGGCAGGAAGGGCCAGGGGA...CCACAGGCCTCCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAAGGCCCCTCAGCCTCTaGCCATCCTCATCGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PEPPTSPDPPVSLSTEAPRPLSL*PSSSFG Trigger: CCCAAACGATGAGGATGGCCAGAGGCTGAGGGGCCT...TGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR TCA 90 bp | CCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCACTCCCCCAGAATGCCTaGGAGAAGGGGGCTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PPVSLSTEAPVQGSRGVSLPQNA*EKGASR Trigger: CCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAG...TGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCTGGGAAGGCCCCTCAGCCTCTaGCCATCCTCATCGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SEGKAKKVVSHRRQQGLGRPLSL*PSSSFG Trigger: CCCAAACGATGAGGATGGCCAGAGGCTGAGGGGCCT...TCCCAGGCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGAAGAGGCAGGACCTGGTaGCCCAAGGGACAGCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: PVSLSTEAPVQGSRGVSGRGRTW*PKGQQA Trigger: CGCTTGCTGTCCCTTGGGTCACCAGGTCCTGCCTCT...TCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR GCA 90 bp | CCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCATCCCCTGGCCCTTCCTaGCTCCAGCCCCAGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: PPVSLSTEAPVQGSRGVSSPGPS*LQPQYN Trigger: ATTGTACTGGGGCTGGAGGCAGGAAGGGCCAGGGGA...TGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGTCCCCTGGCCCTTCCTaGCTCCAGCCCCAGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: ASSPSTIRREGQEGRQPQSPGPS*LQPQYN Trigger: ATTGTACTGGGGCTGGAGGCAGGAAGGGCCAGGGGA...CTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAGGAGGCCTGTGGGAGGAATGTGTGGTGTaGAGAGAGGGATGGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSNSPRMPERRGLAGGLWEECVV*REGWAV Trigger: GACTGCCCATCCCTCTCTGCACACCACACATTCCTC...CCACAGGCCTCCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGAGGCCCCTCAGCCTCTaGCCATCCTCATCGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PAPVQSEGKAKKVVSHRRRPLSL*PSSSFG Trigger: CCCAAACGATGAGGATGGCCAGAGGCTGAGGGGCCT...CCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCAACTCTGAAATCCCCTaGCCCTTCCTGCCTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VQSEGKAKKVVSHRRQQGNSEIP*PFLPPA Trigger: GGCTGGAGGCAGGAAGGGCCAGGGGATTTCAGAGTT...GCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| 3UTR-3UTR CCA 90 bp | AACCACCCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGTCCCGGAATGGAACATaGAGGAATGTGTGGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NHPEPPTSPDPPVSLSTESRNGT*RNVWCA Trigger: TGCACACCACACATTCCTCCATGTTCCATTCCGGGA...CTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGGGTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGACTCTCCTTCCCGGAATaGAACATGGAGGAATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PVSLSTEAPVQGSRGVSGLSFPE*NMEECV Trigger: CACACATTCCTCCATGTTCCATTCCGGGAAGGAGAG...TCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAGGAGGCCTGTGGGGGAAGATGTTCTTCTTGTaGGAGTTGTTGTCCAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SNSPRMPERRGLAGGLWGKMFFL*ELLSKL Trigger: CAACTTGGACAACAACTCCCACAAGAAGAACATCTT...CCCCCACAGGCCTCCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGTTGGGCTGGCAGGACTaGGCATTAACAGCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSLFISDLSNSPRMPERRLGWQD*ALTAQQ Trigger: CTGCTGGGCTGTTAATGCTCAGTCCTGCCAGCCCAA...CCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTGTCAACCTCTCCTTCCCGGAATaGAACATGGAGGAATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CLLTWVASQQRSHSQPVNLSFPE*NMEECV Trigger: CACACATTCCTCCATGTTCCATTCCGGGAAGGAGAG...GTTGACAGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGCCATCCTCATCGTTTaGGCTGGCAGGACTGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SSLFISDLSNSPRMPERRAILIV*AGRTEH Trigger: ATGCTCAGTCCTGCCAGCCCAAACGATGAGGATGGC...CCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CAA 90 bp | CGAGCCATGAAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTaGTCCAAGTTGCCCTGGAAGACCTTGCTGCTTCCTTGCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RAMKGFSKMFFLWEL*SKLPWKTLLLPCSS Trigger: TGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCATGGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CAA 90 bp | ATGTTCTTCTTGTGGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTaGCTGCTTCCTTGCTCCTCATATACAGTCCACTGCACACCATCA | + |
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Preference number: 2 (lower is better) Translates to: MFFLWELLSKLPWKT*LLPCSSYTVHCTPS Trigger: TGATGGTGTGCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTTGTCCAAGTTGCCCTGACCTTGCTGCTTCCTTaGTCCTCATATACAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EGFLEDVLLVGVVVQVALTLLLP*SSYTVH Trigger: GTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGT...CAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR TCA 72 bp | CAAGAGGCGTCTCAGGAGATAAGAGGCAGGACCTGGTaGCCCAAGGGACAGCAAGCGGACGTGGGCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QEASQEIRGRTW*PKGQQADVGLS Trigger: GGAGAGGCCCACGTCCGCTTGCTGTCCCTTGGGTCACCAGGTCCTGCCTCTTATCTCCTGAGACGCCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR CCA 72 bp | GCAGGACCTGGTGACCCAAGGGACAGCAAGCGGACGTaGGCCTCTCCTTCCCGGAATGGAACATGGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: AGPGDPRDSKRT*ASPSRNGTWRN Trigger: ATTCCTCCATGTTCCATTCCGGGAAGGAGAGGCCCACGTCCGCTTGCTGTCCCTTGGGTCACCAGGTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR TCA 72 bp | CTGAGCATTAACAGCCCAGCAGCTCCAGGCGCAGGGTaGTGCGGTTATGCCAGGACACTGGAAGGACACGCA | + |
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Preference number: 3 (lower is better) Translates to: LSINSPAAPGAG*CGYARTLEGHA Trigger: TGCGTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGCTGCTGGGCTGTTAATGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CCA 72 bp | CTCCAGGCGCAGGGTGATGCGGTTATGCCAGGACACTaGAAGGACACGCACGTAGCGAGCCATGAAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LQAQGDAVMPGH*KDTHVASHEGF Trigger: AAACCCTTCATGGCTCGCTACGTGCGTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACTTGCCCTGGAAGACCTaGCTGCTTCCTTGCTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: LPPAPVQSEGKAKKVVSHLPWKT*LLPCSS Trigger: TGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAA...GTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR GCA 72 bp | CAGACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTaGAAGGGTCAAGAGGCGTCTCAGGAGATAAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: QTRQSPCQLRLQ*KGQEASQEIRG Trigger: GCCTCTTATCTCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CAA 90 bp | GGAATCTGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTGACCCGCCAGTCTCCTaGTCAACTGAGGCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GICLLTWVASQQRSHSQPDPPVS*STEAPV Trigger: CACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGTC...AGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACGAGTTGTTGTCCAAGTaGCCCTGGAAGACCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LPPAPVQSEGKAKKVVSHELLSK*PWKTLL Trigger: CAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTC...GTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR TCA 72 bp | GCCAGGACACTGGAAGGACACGCACGTAGCGAGCCATaGAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: ARTLEGHARSEP*RVSRRCSSCGS Trigger: ACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCATGGCTCGCTACGTGCGTGTCCTTCCAGTGTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTCGAAGATGTTCTTCTaGTGGGAGTTGTTGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LYSSQTCPTPPECLREGGSKMFF*WELLSK Trigger: CTTGGACAACAACTCCCACAAGAAGAACATCTTCGA...GCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR GCA 72 bp | TGTGGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTTaGTGCTTCCTTGCTCCTCATATACAGTCCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: CGSCCPSCPGRP*CFLAPHIQSTA Trigger: TGCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR GCA 72 bp | CGAAGATGTTCTTCTTGTGGGAGTTGTTGTCCAAGTTaGCCTGGAAGACCTTGCTGCTTCCTTGCTCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: RRCSSCGSCCPS*PGRPCCFLAPH Trigger: ATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CCA 72 bp | CGAGCCATGAAGGGTTTCTCGAAGATGTTCTTCTTGTaGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTTG | + |
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Preference number: 3 (lower is better) Translates to: RAMKGFSKMFFL*ELLSKLPWKTL Trigger: CAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCATGGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
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| 3UTR CCA 72 bp | AGAACACGAATGTATTTTGGAATCTGCTTGTTAACTTaGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCT | + |
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Preference number: 3 (lower is better) Translates to: RTRMYFGICLLT*VASQQRSHSQP Trigger: AGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCAAAATACATTCGTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS-3UTR TCA 90 bp | TCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCTGGGAGCTCCAGGCGCAGGGTaGTGCGGTTATGCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SEGKAKKVVSHRRQQGLGAPGAG*CGYART Trigger: TGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGC...TCCCAGGCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS-3UTR TCA 90 bp | GTGTGGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCTGAGTCAGCTCCAGGCGCAGGGTaGTGCGGTTATGCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VWCAERDGQSGAPFSPESAPGAG*CGYART Trigger: TGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGC...TGACTCAGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS-3UTR CCA 90 bp | GTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCCCTCCCGGCACGGCTaGCACCCTGCGTCATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSEGKAKKVVSHRRQQGPSRHG*HPASSH Trigger: GTGTGATGACGCAGGGTGCCAGCCGTGCCGGGAGGG...GCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| 3UTR CAA 72 bp | CCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTaGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPPTSPDPPVS*STEAPVQGSRG Trigger: GCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCACCCTCCCGGCACGGCTaGCACCCTGCGTCATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSTIRREGQEGRQPQKAPSRHG*HPASSH Trigger: GTGTGATGACGCAGGGTGCCAGCCGTGCCGGGAGGG...TGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCCCTGTCACTTGCCTCTaGGTGCCCAGGTCAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLQPQYNQKGRPRRSSAPVTCL*VPRSTC Trigger: GCAGGTTGACCTGGGCACTCAGAGGCAAGTGACAGG...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGGCTCCACGTTCAGGCACAGGCTaGAGTCACAGAAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEPPTSPDPPVSLSTEAPRSGTG*SHRSHQ Trigger: CTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACG...TGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGGAGGCTAGGTTGTTaGAAAGATCGGGGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVSLSTEAPVQGSRGVSGRLGC*KDRGWG Trigger: CCCCCACCCCCGATCTTTCCAACAACCTAGCCTCCC...TGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032825.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCTGGGAGGAAGTCACGGGCCCCCTaGGTGATGATTCCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RREGQEGRQPQKAAGPGRKSRAP*VMIPVT Trigger: AGTGACAGGAATCATCACCCAGGGGGCCCGTGACTT...CCTCCCAGGCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCGCCACATACTGGATGTaGCCAAAGTCACGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLQPQYNQKGRPRRSSAATYWM*PKSRAP Trigger: GGGGGCCCGTGACTTTGGCCACATCCAGTATGTGGC...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCTGAGTTCACTTGCCTCTGAGTaGCCAGGTCAACCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MCGVQRGMGSQGLPSVLSSLASE*PGQPAA Trigger: GGCTGCAGGTTGACCTGGGCACTCAGAGGCAAGTGA...ACTCAGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGCGCAGGGTGATGCGGTTATGCCAGGACACTGGAAGGACACGCACGTACGTTCAGGCACAGGCTaGAGTCACAGAAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQAQGDAVMPGHWKDTHVRSGTG*SHRSHQ Trigger: CTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACG...TACGTGCGTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCCCCTCAGCCTCTGGCCATCCTCATCGTTTGGGCTGGCAGGACTGAGCATGTCTTGTAGCTGCTaGAGGCTGACATCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRPLSLWPSSSFGLAGLSMSCSC*RLTSGC Trigger: ACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACAT...GCTCAGTCCTGCCAGCCCAAACGATGAGGATGGCCAGAGGCTGAGGGGCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCCCTGCAGCCATTCCTTaGCACTGTTGCTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFLPPAPVQSEGKAKKVVPAAIP*HCCSEP Trigger: CGGCTCAGAGCAACAGTGCCAAGGAATGGCTGCAGG...GACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCCCTGCAGCCATTCCTTaGCACTGTTGCTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQPQYNQKGRPRRSSAPAAIP*HCCSEP Trigger: CGGCTCAGAGCAACAGTGCCAAGGAATGGCTGCAGG...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGCTCCTCATATACAGTCCACTGCACACCATCATCACTGTGGGCTACCTTGAGGCGCAGAGTAGCATaGCGCACAGCGCGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCSSYTVHCTPSSLWATLRRRVA*RTARPA Trigger: TGCTGGCCGCGCTGTGCGGCATGCTACTCTGCGCCT...CAAGGTAGCCCACAGTGATGATGGTGTGCAGTGGACTGTATATGAGGAGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCACCGACCTCTCCAGACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAATTGTAGCAAGGGTTTaGGGAGCATGGTCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PEPPTSPDPPVSLSTEAPIVARV*GAWSSL Trigger: GAGAGAGGACCATGCTCCCCAAACCCTTGCTACAAT...TGGAGCCTCAGTTGACAAGGAGACTGGCGGGTCTGGAGAGGTCGGTGGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCTCCAGCCTTCCCAAGTaGGGGTACCAGCCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLPPAPVQSEGKAKKVVSSLPK*GYQPKA Trigger: TGCTTTTGGCTGGTACCCCCACTTGGGAAGGCTGGA...GACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCTGAGTAAGTCACGGGCCCCCTaGGTGATGATTCCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: MCGVQRGMGSQGLPSVLSKSRAP*VMIPVT Trigger: AGTGACAGGAATCATCACCCAGGGGGCCCGTGACTT...ACTCAGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCACTCAGGCGCAGAGTAGCATaGCGCACAGCGCGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGLGVVGTDSPHTPTSLRRRVA*RTARPA Trigger: TGCTGGCCGCGCTGTGCGGCATGCTACTCTGCGCCT...GAGTGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | ACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCCTGGATCCAGGGCTTaGTATCATAGTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRQSPCQLRLQCKGQEASPGSRA*YHSCWL Trigger: CAGCCAGCAACTATGATAGCAAGCCCTGGATCCAGG...AGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTGTCAACGCACGGCTGGCACCCTaGGTCATCACACCTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: CLLTWVASQQRSHSQPVNARLAP*VITPDT Trigger: GGTATCAGGTGTGATGACGCAGGGTGCCAGCCGTGC...GTTGACAGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCTGAGTCAATGTCTTGTAGCTGCTaGAGGCTGACATCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWCAERDGQSGAPFSPESMSCSC*RLTSGC Trigger: ACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACAT...TGACTCAGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | GTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCTCCAGCCTTCCCAAGTaGGGGTACCAGCCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSEGKAKKVVSHRRQQGSSLPK*GYQPKA Trigger: TGCTTTTGGCTGGTACCCCCACTTGGGAAGGCTGGA...GCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | AGTCAAGCCCTGGCAGGAAGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCAGCCACATACTGGATGTaGCCAAAGTCACGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQALAGSLGLGVVGTDSPATYWM*PKSRAP Trigger: GGGGGCCCGTGACTTTGGCCACATCCAGTATGTGGC...TGGGCTATCTGTACCAACCACCCCAAGTCCTAAACTTCCTGCCAGGGCTTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR TCA 90 bp | AGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGGCTGTAAGCCACCTTaGAGGTCTTCAGGTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPSTIRREGQEGRQPQKAGCKPP*RSSGTP Trigger: CGGAGTACCTGAAGACCTTCAAGGTGGCTTACAGCC...TGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR TCA 90 bp | AGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGGGCTGTAAGCCACCTTaGAGGTCTTCAGGTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STIRREGQEGRQPQKAAGGCKPP*RSSGTP Trigger: CGGAGTACCTGAAGACCTTCAAGGTGGCTTACAGCC...CCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGACCTGGATCCAGGGCTTaGTATCATAGTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSTEAPVQGSRGVSGPGSRA*YHSCWL Trigger: CAGCCAGCAACTATGATAGCAAGCCCTGGATCCAGG...TCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TGGAATCTGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCGGCTCAGAACATCCGTaGAACTCACAGCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WNLLVNLGSKPAEVPQPTGSEHP*NSQPRS Trigger: GCTCCTGGGCTGTGAGTTGCACGGATGTTCTGAGCC...GGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGTTGTTGTCCAAGTTaGCCTGGAAGACCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLPPAPVQSEGKAKKVVSCCPS*PGRPCC Trigger: GCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACT...GACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | AGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCGTTCAGGCACAGGCTaGAGTCACAGAAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: STIRREGQEGRQPQKAAGRSGTG*SHRSHQ Trigger: CTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACG...CCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGTCCATGTCTTGTAGCTaGTGGAGGCTGACATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSTIRREGQEGRQPQKSMSCS*WRLTSG Trigger: GCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGA...CTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAATTCCTTGGCACTGTTaGTCTGAGCCGTCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FISDLSNSPRMPERRGLAIPWHC*SEPSRH Trigger: ATGCCTGGACGGCTCAGAGCAACAGTGCCAAGGAAT...TGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGATTCCTTGGCACTGTTaGTCTGAGCCGTCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSTIRREGQEGRQPQKIPWHC*SEPSRH Trigger: ATGCCTGGACGGCTCAGAGCAACAGTGCCAAGGAAT...CTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGTCACTTGCCTCTGAGTaGCCAGGTCAACCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSSQTCPTPPECLREGSLASE*PGQPAA Trigger: GGCTGCAGGTTGACCTGGGCACTCAGAGGCAAGTGA...CCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGGTGTGCAGAGAGGGATGGGCAGTCAGGGGCTCCCTTCAGTCCTGAGTACCTTGCTGCTTCCTTaGTCCTCATATACAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MCGVQRGMGSQGLPSVLSTLLLP*SSYTVH Trigger: GTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGT...ACTCAGGACTGAAGGGAGCCCCTGACTGCCCATCCCTCTCTGCACACCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGATTGTAGCAAGGGTTTaGGGAGCATGGTCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPVQSEGKAKKVVSHRRIVARV*GAWSSL Trigger: GAGAGAGGACCATGCTCCCCAAACCCTTGCTACAAT...CCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCACTCGGCTCAGAACATCCGTaGAACTCACAGCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLGVVGTDSPHTPTSLGSEHP*NSQPRS Trigger: GCTCCTGGGCTGTGAGTTGCACGGATGTTCTGAGCC...GAGTGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TGGAATCTGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTCCATGTCTTGTAGCTaGTGGAGGCTGACATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WNLLVNLGSKPAEVPQPTSMSCS*WRLTSG Trigger: GCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGA...GGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAAGGGTTTGGGGAGCATaGTCCTCTCTCAGTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SPSTIRREGQEGRQPQKARVWGA*SSLSLI Trigger: AATGAGACTGAGAGAGGACCATGCTCCCCAAACCCT...TGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTTGCTGCTTCCTTGCTGAGCCGTCCAGGCATTaGTCTTGCCCTGATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCGSCCPSCPGRPCCFLAEPSRH*SCPDYP Trigger: TGGATAATCAGGGCAAGATCAATGCCTGGACGGCTC...AGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGTGCCCTGGAAGACCTTaGTGCTTCCTTGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSSQTCPTPPECLREGCPGRP*CFLAPH Trigger: ATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCA...CCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTGTCAACAGTTGTTGTCCAAGTTaGCCTGGAAGACCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLTWVASQQRSHSQPVNSCCPS*PGRPCC Trigger: GCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACT...GTTGACAGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCAGAGCCGTCCAGGCATTaGTCTTGCCCTGATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLGLGVVGTDSPHTPTSEPSRH*SCPDYP Trigger: TGGATAATCAGGGCAAGATCAATGCCTGGACGGCTC...TGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCACTCTGCCCTGGAAGACCTTaGTGCTTCCTTGCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLGVVGTDSPHTPTSLCPGRP*CFLAPH Trigger: ATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCA...GAGTGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGAAAGTCACCAGACATTTaGCATCATTGTAGCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSTEAPVQGSRGVSGKSPDI*HHCSKG Trigger: ACCCTTGCTACAATGATGCCAAATGTCTGGTGACTT...TCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTTGTCCAAGTTGCCCCCTGCAGCCATTCCTTaGCACTGTTGCTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MKGFSKMFFLWELLSKLPPAAIP*HCCSEP Trigger: CGGCTCAGAGCAACAGTGCCAAGGAATGGCTGCAGG...GGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCAAGATGTTCTTCTTGTaGGAGTTGTTGTCCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQPQYNQKGRPRRSSAKMFFL*ELLSKL Trigger: CAACTTGGACAACAACTCCCACAAGAAGAACATCTT...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| 3UTR CAA 72 bp | GTTGTCCAAGTTGCCCTGGAAGACCTTGCTGCTTCCTaGCTCCTCATATACAGTCCACTGCACACCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VVQVALEDLAAS*LLIYSPLHTII Trigger: GATGATGGTGTGCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| 3UTR CAA 72 bp | TTGTGGGAGTTGTTGTCCAAGTTGCCCTGGAAGACCTaGCTGCTTCCTTGCTCCTCATATACAGTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWELLSKLPWKT*LLPCSSYTVHC Trigger: GCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTTGTCCAAGTTGCCCTGATTCCTTGGCACTGTTaGTCTGAGCCGTCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGFLEDVLLVGVVVQVALIPWHC*SEPSRH Trigger: ATGCCTGGACGGCTCAGAGCAACAGTGCCAAGGAAT...CAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGAGGGTTTGGGGAGCATaGTCCTCTCTCAGTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFISDLSNSPRMPERRRVWGA*SSLSLI Trigger: AATGAGACTGAGAGAGGACCATGCTCCCCAAACCCT...CCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGAATCTGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAAACCTTGCTGCTTCCTTaGTCCTCATATACAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGICLLTWVASQQRSHSQTLLLP*SSYTVH Trigger: GTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGT...TTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCTGTCAACAAGTCACCAGACATTTaGCATCATTGTAGCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLTWVASQQRSHSQPVNKSPDI*HHCSKG Trigger: ACCCTTGCTACAATGATGCCAAATGTCTGGTGACTT...GTTGACAGGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| 3UTR CAA 72 bp | GAGAACACGAATGTATTTTGGAATCTGCTTGTTAACTaGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ENTNVFWNLLVN*GSKPAEVPQPT Trigger: GGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCAAAATACATTCGTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| 3UTR CAA 72 bp | AAGGGTTTCTCGAAGATGTTCTTCTTGTGGGAGTTGTaGTCCAAGTTGCCCTGGAAGACCTTGCTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGFSKMFFLWEL*SKLPWKTLLLP Trigger: AGGAAGCAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205563.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCACTCAAGATGTTCTTCTTGTaGGAGTTGTTGTCCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLGVVGTDSPHTPTSLKMFFL*ELLSKL Trigger: CAACTTGGACAACAACTCCCACAAGAAGAACATCTT...GAGTGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 90 bp | GTACTCCGCCCTCCCGGCACGGCTGGCACCCTGCGTCATCACACCTaGTACCCGCATCTTCCGCAGAAGGTTCACCTGGATCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLRPPGTAGTLRHHT*YPHLPQKVHLDPGL Trigger: AAGCCCTGGATCCAGGTGAACCTTCTGCGGAAGATGCGGGTATCAGGTGTGATGACGCAGGGTGCCAGCCGTGCCGGGAGGGCGGAGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS CCA 90 bp | CATTGTCTTGGCCCGTCAAGCAGGTGCCACCGTTCAGGCACAGGCTaGAGTCACAGAAGTCACCAGACGCGGCGAAGAGGCCAGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HCLGPSSRCHRSGTG*SHRSHQTRRRGQRR Trigger: GCGCCTCTGGCCTCTTCGCCGCGTCTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCCAAGACAATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS TCA 90 bp | CCTGGATCCAGGGCTTGCTATCATAGTTGCTGGCTGTCCAGGCATTaGCGATCCCTGTGCGGTACAGACGAGCCAGCTCCGGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRACYHSCWLSRH*RSLCGTDEPAPGPS Trigger: GCTGGGGCCCGGAGCTGGCTCGTCTGTACCGCACAGGGATCGTCAATGCCTGGACAGCCAGCAACTATGATAGCAAGCCCTGGATCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS GCA 90 bp | ACGATCCCTGTGCGGTACAGACGAGCCAGCTCCGGGCCCCAGCGCTaGAAGCCCATGAAACCCATATACACAGACGAGGCGGAAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIPVRYRRASSGPQR*KPMKPIYTDEAEIC Trigger: ACAGATTTCCGCCTCGTCTGTGTATATGGGTTTCATGGGCTTGCAGCGCTGGGGCCCGGAGCTGGCTCGTCTGTACCGCACAGGGATCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS CCA 90 bp | TGCAACTCACAGCCCAGGAGCTCGAAGCGGAGGGTGCAGCCGCGGTaGCACGAAACAGGGTACAGCTTTATGTACTGTGCCTCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CNSQPRSSKRRVQPR*HETGYSFMYCASRV Trigger: GACTCTGGAGGCACAGTACATAAAGCTGTACCCTGTTTCGTGCCACCGCGGCTGCACCCTCCGCTTCGAGCTCCTGGGCTGTGAGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCCTGGCTGTCCAGGCATaGACGATCCCTGTGCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SCLQPQYNQKGRPRRSSALAVQA*TIPVRY Trigger: GTACCGCACAGGGATCGTCAATGCCTGGACAGCCAG...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS GCA 90 bp | CAGGGCAGAGGCAGTAGATGTCATTGTCTTGGCCCGTCAAGCAGGTaGCACCGTTCAGGCACAGGCTGGAGTCACAGAAGTCACCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: QGRGSRCHCLGPSSR*HRSGTGWSHRSHQT Trigger: CGTCTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCCAAGACAATGACATCTACTGCCTCTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS GCA 90 bp | CAGAACATCCGTGCAACTCACAGCCCAGGAGCTCGAAGCGGAGGGTaGAGCCGCGGTGGCACGAAACAGGGTACAGCTTTATGTACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNIRATHSPGARSGG*SRGGTKQGTALCTV Trigger: CACAGTACATAAAGCTGTACCCTGTTTCGTGCCACCGCGGCTGCACCCTCCGCTTCGAGCTCCTGGGCTGTGAGTTGCACGGATGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCAGGAGGCCTGTGGGGGTTCTTCTTGTGGGAGTaGTTGTCCAAGTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SNSPRMPERRGLAGGLWGFFLWE*LSKLPW Trigger: CCAGGGCAACTTGGACAACAACTCCCACAAGAAGAA...CCCCCACAGGCCTCCTGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 90 bp | TGCGGTACAGACGAGCCAGCTCCGGGCCCCAGCGCTGCAAGCCCATaGAACCCATATACACAGACGAGGCGGAAATCTGTGAATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CGTDEPAPGPSAASP*NPYTQTRRKSVNQQ Trigger: TTGCTGATTCACAGATTTCCGCCTCGTCTGTGTATATGGGTTTCATGGGCTTGCAGCGCTGGGGCCCGGAGCTGGCTCGTCTGTACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCGATGATTCCTGTCACTaGCCTCTGAGTGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCLQPQYNQKGRPRRSSADDSCH*PLSAQV Trigger: GACCTGGGCACTCAGAGGCAAGTGACAGGAATCATC...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCTGGGAGGTTCTTGTGGGAGTTGTaGTCCAAGTTGCCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RREGQEGRQPQKAAGPGRFLWEL*SKLPWK Trigger: CTTCCAGGGCAACTTGGACAACAACTCCCACAAGAA...CCTCCCAGGCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TGGAATCTGCTTGTTAACTTGGGTAGCAAGCCAGCAGAGGTCCCACAGCCAACCCTGGCTGTCCAGGCATaGACGATCCCTGTGCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WNLLVNLGSKPAEVPQPTLAVQA*TIPVRY Trigger: GTACCGCACAGGGATCGTCAATGCCTGGACAGCCAG...GGTTGGCTGTGGGACCTCTGCTGGCTTGCTACCCAAGTTAACAAGCAGATTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCCTGGGAGGTCTGGCTGTCAGGAATaGTGTTATTCTTCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RREGQEGRQPQKAAGPGRSGCQE*CYSSGP Trigger: TGGGCCTGAAGAATAACACAATTCCTGACAGCCAGA...CCTCCCAGGCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | GTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCTTGCCCTGGAAGACCTaGCTGCTTCCTTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VQSEGKAKKVVSHRRQQGLPWKT*LLPCSS Trigger: TGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAA...GCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | ACCCGCCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTGAGTTGTTGTCCAAGTaGCCCTGGAAGACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRQSPCQLRLQCKGQEASELLSK*PWKTLL Trigger: CAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTC...AGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGGCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 90 bp | TTGGGGAGCATGGTCCTCTCTCAGTCTCATTGCACACAAGGCCTGTaGAGCCTTCAGGGCAGAGGCAGTAGATGTCATTGTCTTGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGSMVLSQSHCTQGL*SLQGRGSRCHCLGP Trigger: CGGGCCAAGACAATGACATCTACTGCCTCTGCCCTGAAGGCTTCACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 90 bp | AGTGGATGCCCGAGTAGCCCACAGGGCACTGGCAGATGTATTCGGTaGAGATGTCCCCACGCTGTGTGTCCAAAGTCACCAGACATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGCPSSPQGTGRCIR*RCPHAVCPKSPDIW Trigger: CCAAATGTCTGGTGACTTTGGACACACAGCGTGGGGACATCTTCACCGAATACATCTGCCAGTGCCCTGTGGGCTACTCGGGCATCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTCCTTGTCAACTGAGGCTCCAGTGCAAGGGTCAAGAGGCGTCTCAGGAGAGTTGTTGTCCAAGTaGCCCTGGAAGACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSLSTEAPVQGSRGVSGELLSK*PWKTLL Trigger: CAGCAAGGTCTTCCAGGGCAACTTGGACAACAACTC...TCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAAGGAGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCTTCTTCTTGTGGGAGTaGTTGTCCAAGTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFLPPAPVQSEGKAKKVVFFLWE*LSKLPW Trigger: CCAGGGCAACTTGGACAACAACTCCCACAAGAAGAA...GACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 90 bp | CCAGCCAAAAGCACGCAGGTTCCATGTCTTGTAGCTGCTGGAGGCTaGCATCTGGCTGTCAGGAATTGTGTTATTCTTCAGGCCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAKSTQVPCLVAAGG*HLAVRNCVILQAQG Trigger: CCCCTGGGCCTGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGAACCTGCGTGCTTTTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | AGTCAAGCCCTGGCAGGAAGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCAGATGATTCCTGTCACTaGCCTCTGAGTGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQALAGSLGLGVVGTDSPDDSCH*PLSAQV Trigger: GACCTGGGCACTCAGAGGCAAGTGACAGGAATCATC...TGGGCTATCTGTACCAACCACCCCAAGTCCTAAACTTCCTGCCAGGGCTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | GTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCACAGAAGGCAGCAGGGCTTACCCAAAAACTCCTaGTCTCCACCGCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VQSEGKAKKVVSHRRQQGLPKNS*SPPLSS Trigger: GGATGAAAGCGGTGGAGACAAGGAGTTTTTGGGTAA...GCCCTGCTGCCTTCTGTGGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTCCAGCCCCAGTACAATCAGAAGGGAAGGCCAAGAAGGTCGTCAGCCTCGAAGATGTTCTTCTaGTGGGAGTTGTTGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLQPQYNQKGRPRRSSASKMFF*WELLSK Trigger: CTTGGACAACAACTCCCACAAGAAGAACATCTTCGA...GGCTGACGACCTTCTTGGCCTTCCCTTCTGATTGTACTGGGGCTGGAGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCATTACCCAAAAACTCCTaGTCTCCACCGCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FISDLSNSPRMPERRGLALPKNS*SPPLSS Trigger: GGATGAAAGCGGTGGAGACAAGGAGTTTTTGGGTAA...TGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGTTTAGGACTTGGGGTGGTTGGTACAGATAGCCCACATACCCCAACTTCATTGCCCTGGAAGACCTaGCTGCTTCCTTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLGLGVVGTDSPHTPTSLPWKT*LLPCSS Trigger: TGAGGAGCAAGGAAGCAGCAAGGTCTTCCAGGGCAA...TGAAGTTGGGGTATGTGGGCTATCTGTACCAACCACCCCAAGTCCTAAACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS GCA 90 bp | AGTGGGGGTACCAGCCAAAAGCACGCAGGTTCCATGTCTTGTAGCTaGTGGAGGCTGACATCTGGCTGTCAGGAATTGTGTTATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGGTSQKHAGSMSCS*WRLTSGCQELCYSS Trigger: TGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGAACCTGCGTGCTTTTGGCTGGTACCCCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS CCA 90 bp | AGTCACCAGACATTTGGCATCATTGTAGCAAGGGTTTGGGGAGCATaGTCCTCTCTCAGTCTCATTGCACACAAGGCCTGTGAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHQTFGIIVARVWGA*SSLSLIAHKACEAF Trigger: GAAGGCTTCACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAAACCCTTGCTACAATGATGCCAAATGTCTGGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGGGCTAGCATTAACCTTCAGGCTGTaGTTGTCCAGGTTACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FISDLSNSPRMPERRGLALTFRL*LSRLPK Trigger: TTTGGGTAACCTGGACAACAACAGCCTGAAGGTTAA...TGCTAGCCCCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGTCTGGCTGTCAGGAATaGTGTTATTCTTCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLFISDLSNSPRMPERRSGCQE*CYSSGP Trigger: TGGGCCTGAAGAATAACACAATTCCTGACAGCCAGA...CCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTATTCATCTCAGACCTGTCCAACTCCCCCAGAATGCCTGAGAGAAGGGTCGAAGATGTTCTTCTaGTGGGAGTTGTTGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLYSSQTCPTPPECLREGSKMFF*WELLSK Trigger: CTTGGACAACAACTCCCACAAGAAGAACATCTTCGA...CCCTTCTCTCAGGCATTCTGGGGGAGTTGGACAGGTCTGAGATGAATAGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS CCA 72 bp | GGCCCGTCAAGCAGGTGCCACCGTTCAGGCACAGGCTaGAGTCACAGAAGTCACCAGACGCGGCGAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPSSRCHRSGTG*SHRSHQTRRRG Trigger: GCCTCTTCGCCGCGTCTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
||
| CDS GCA 72 bp | GTGCGGTACAGACGAGCCAGCTCCGGGCCCCAGCGCTaGAAGCCCATGAAACCCATATACACAGACGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VRYRRASSGPQR*KPMKPIYTDEA Trigger: CGCCTCGTCTGTGTATATGGGTTTCATGGGCTTGCAGCGCTGGGGCCCGGAGCTGGCTCGTCTGTACCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
||
| CDS TCA 72 bp | CCTCCCGGCACGGCTGGCACCCTGCGTCATCACACCTaGTACCCGCATCTTCCGCAGAAGGTTCACCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPGTAGTLRHHT*YPHLPQKVHLD Trigger: ATCCAGGTGAACCTTCTGCGGAAGATGCGGGTATCAGGTGTGATGACGCAGGGTGCCAGCCGTGCCGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS GCA 72 bp | CGTGCAACTCACAGCCCAGGAGCTCGAAGCGGAGGGTaGAGCCGCGGTGGCACGAAACAGGGTACAGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RATHSPGARSGG*SRGGTKQGTAL Trigger: TAAAGCTGTACCCTGTTTCGTGCCACCGCGGCTGCACCCTCCGCTTCGAGCTCCTGGGCTGTGAGTTGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS TCA 72 bp | ACTCAAACTTGCGTCCGTCGAGGCTGTAAGCCACCTTaGAGGTCTTCAGGTACTCCGCCCTCCCGGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: TQTCVRRGCKPP*RSSGTPPSRHG Trigger: GCCGTGCCGGGAGGGCGGAGTACCTGAAGACCTTCAAGGTGGCTTACAGCCTCGACGGACGCAAGTTTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS GCA 72 bp | GTGTTATTCTTCAGGCCCAGGGGCTCAGAACATCCGTaGAACTCACAGCCCAGGAGCTCGAAGCGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VLFFRPRGSEHP*NSQPRSSKRRV Trigger: CACCCTCCGCTTCGAGCTCCTGGGCTGTGAGTTGCACGGATGTTCTGAGCCCCTGGGCCTGAAGAATAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 90 bp | AAGGCCTGTGAAGCCTTCAGGGCAGAGGCAGTAGATGTCATTGTCTaGGCCCGTCAAGCAGGTGCCACCGTTCAGGCACAGGCTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: KACEAFRAEAVDVIV*ARQAGATVQAQAGV Trigger: GACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCCAAGACAATGACATCTACTGCCTCTGCCCTGAAGGCTTCACAGGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 90 bp | GATGTGGCCAAAGTCACGGGCCCCCTGGGTGATGATTCCTGTCACTaGCCTCTGAGTGCCCAGGTCAACCTGCAGCCATTCCTTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: DVAKVTGPLGDDSCH*PLSAQVNLQPFLGT Trigger: AGTGCCAAGGAATGGCTGCAGGTTGACCTGGGCACTCAGAGGCAAGTGACAGGAATCATCACCCAGGGGGCCCGTGACTTTGGCCACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS TCA 72 bp | AGGGCTTGCTATCATAGTTGCTGGCTGTCCAGGCATTaGCGATCCCTGTGCGGTACAGACGAGCCAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RACYHSCWLSRH*RSLCGTDEPAP Trigger: CGGAGCTGGCTCGTCTGTACCGCACAGGGATCGTCAATGCCTGGACAGCCAGCAACTATGATAGCAAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS TCA 72 bp | CCGAGTAGCCCACAGGGCACTGGCAGATGTATTCGGTaGAGATGTCCCCACGCTGTGTGTCCAAAGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: PSSPQGTGRCIR*RCPHAVCPKSP Trigger: TGGTGACTTTGGACACACAGCGTGGGGACATCTTCACCGAATACATCTGCCAGTGCCCTGTGGGCTACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS GCA 72 bp | GGCAGTAGATGTCATTGTCTTGGCCCGTCAAGCAGGTaGCACCGTTCAGGCACAGGCTGGAGTCACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSRCHCLGPSSR*HRSGTGWSHRS Trigger: ACTTCTGTGACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCCAAGACAATGACATCTACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 ENSMUST00000205563.2 |
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| CDS CAA 72 bp | CAAGGGTTTGGGGAGCATGGTCCTCTCTCAGTCTCATaGCACACAAGGCCTGTGAAGCCTTCAGGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QGFGEHGPLSVS*HTRPVKPSGQR Trigger: CCTCTGCCCTGAAGGCTTCACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAAACCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS GCA 72 bp | CCAGGTTGTAGTAGTTGGTCTCGGTTTCACAGTGGATaGCCGAGTAGCCCACAGGGCACTGGCAGATGTATT | + |
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Preference number: 6 (lower is better) Translates to: PGCSSWSRFHSG*PSSPQGTGRCI Trigger: AATACATCTGCCAGTGCCCTGTGGGCTACTCGGGCATCCACTGTGAAACCGAGACCAACTACTACAACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032825.14 |
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| CDS CCA 72 bp | TGTCCCCACGCTGTGTGTCCAAAGTCACCAGACATTTaGCATCATTGTAGCAAGGGTTTGGGGAGCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: CPHAVCPKSPDI*HHCSKGLGSMV Trigger: GACCATGCTCCCCAAACCCTTGCTACAATGATGCCAAATGTCTGGTGACTTTGGACACACAGCGTGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 72 bp | TGTAGCTGCTGGAGGCTGACATCTGGCTGTCAGGAATaGTGTTATTCTTCAGGCCCAGGGGCTCAGAACATC | + |
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Preference number: 6 (lower is better) Translates to: CSCWRLTSGCQE*CYSSGPGAQNI Trigger: GATGTTCTGAGCCCCTGGGCCTGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTCCAGCAGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 90 bp | TCCATGTCTTGTAGCTGCTGGAGGCTGACATCTGGCTGTCAGGAATaGTGTTATTCTTCAGGCCCAGGGGCTCAGAACATCCGTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: SMSCSCWRLTSGCQE*CYSSGPGAQNIRAT Trigger: AGTTGCACGGATGTTCTGAGCCCCTGGGCCTGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS TCA 72 bp | ATGGTCCTCTCTCAGTCTCATTGCACACAAGGCCTGTaGAGCCTTCAGGGCAGAGGCAGTAGATGTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: MVLSQSHCTQGL*SLQGRGSRCHC Trigger: ACAATGACATCTACTGCCTCTGCCCTGAAGGCTTCACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS TCA 72 bp | AGCACGCAGGTTCCATGTCTTGTAGCTGCTGGAGGCTaGCATCTGGCTGTCAGGAATTGTGTTATTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: STQVPCLVAAGG*HLAVRNCVILQ Trigger: CTGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTCCAGCAGCTACAAGACATGGAACCTGCGTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CCA 72 bp | ACATTTGGCATCATTGTAGCAAGGGTTTGGGGAGCATaGTCCTCTCTCAGTCTCATTGCACACAAGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TFGIIVARVWGA*SSLSLIAHKAC Trigger: ACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAAACCCTTGCTACAATGATGCCAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CCA 72 bp | AGTCACCAGACATTTGGCATCATTGTAGCAAGGGTTTaGGGAGCATGGTCCTCTCTCAGTCTCATTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: SHQTFGIIVARV*GAWSSLSLIAH Trigger: GTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAAACCCTTGCTACAATGATGCCAAATGTCTGGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 72 bp | AAGTCACCAGACATTTGGCATCATTGTAGCAAGGGTTaGGGGAGCATGGTCCTCTCTCAGTCTCATTGCACA | + |
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Preference number: 6 (lower is better) Translates to: KSPDIWHHCSKG*GSMVLSQSHCT Trigger: TGTGCAATGAGACTGAGAGAGGACCATGCTCCCCAAACCCTTGCTACAATGATGCCAAATGTCTGGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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| CDS CAA 72 bp | AGAGTCGGGTTGAACATGTTAACCTTCAGGCTGTTGTaGTCCAGGTTACCCAAAAACTCCTTGTCTCCACCG | + |
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Preference number: 6 (lower is better) Translates to: RVGLNMLTFRLL*SRLPKNSLSPP Trigger: CGGTGGAGACAAGGAGTTTTTGGGTAACCTGGACAACAACAGCCTGAAGGTTAACATGTTCAACCCGACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032825.14 ENSMUST00000107409.5 |
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