Pregenerated sensors for MFF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026150Ensembl transcript IDs: ENSMUST00000073025.12, ENSMUST00000078332.13, ENSMUST00000160744.2, ENSMUST00000160786.8, ENSMUST00000160972.8, ENSMUST00000161648.8, ENSMUST00000162003.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTaGAGAAATACATTTTCAGGGCCGTCATACGATGATGCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: HHRPSLYRYRAFPAL*RNTFSGPSYDDAKT Trigger: TGTCTTTGCATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGGCCTTCCCTGCACTCTaGAGAAATACATTTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HRQTAELLGVFSPACAGRAFPAL*RNTFSG Trigger: CCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGC...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGCCTTCCCTGCACTCTaGAGAAATACATTTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IAHRQTAELLGVFSPACAAFPAL*RNTFSG Trigger: CCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGC...TGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCACCTATTTACAAGACATaGAAAAGGAGAGTGTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: LAPPVQVGDEAESGGLTSPIYKT*KRRVYR Trigger: CCTATACACTCTCCTTTTGCATGTCTTGTAAATAGG...TGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCACTCACTCTTTATGACTaGCATTTCTGTTTAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LAPPVQVGDEAESGGLTSLTLYD*HFCLEN Trigger: ATTCTCTAAACAGAAATGGCAGTCATAAAGAGTGAG...TGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCACCTATTTACAAGACATaGAAAAGGAGAGTGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: IAHRQTAELLGVFSPACAPIYKT*KRRVYR Trigger: CCTATACACTCTCCTTTTGCATGTCTTGTAAATAGG...TGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGCATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCCTCACTCTTTATGACTaGCATTTCTGTTTAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: NSIAHRQTAELLGVFSPALTLYD*HFCLEN Trigger: ATTCTCTAAACAGAAATGGCAGTCATAAAGAGTGAG...GGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAATGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCATTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTGCCTTCCCTGCACTCTaGAGAAATACATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPFLFRELAVQTGEATKIAFPAL*RNTFSG Trigger: CCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGC...AATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAATGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCATTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTCCTATTTACAAGACATaGAAAAGGAGAGTGTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPFLFRELAVQTGEATKIPIYKT*KRRVYR Trigger: CCTATACACTCTCCTTTTGCATGTCTTGTAAATAGG...AATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAATGGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTATTTTCCCTATTTACAAGACATaGAAAAGGAGAGTGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: FLFRELAVQTGEATKIIFPIYKT*KRRVYR Trigger: CCTATACACTCTCCTTTTGCATGTCTTGTAAATAGG...GAAAATAATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTTTCTTTCACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTCCTATTTACAAGACATaGAAAAGGAGAGTGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: HFSFTDSFLNSLFMTAISPIYKT*KRRVYR Trigger: CCTATACACTCTCCTTTTGCATGTCTTGTAAATAGG...AGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTGAAAGAAAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR TCA 72 bp | TTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCGATaGAGCAGAGTCAGGTGGTTTGACTTCAGTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LGVFSPACAGRR*SRVRWFDFSPA Trigger: TGCAGGACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGCTAAAAACTCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR GCA 72 bp | CCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTaGACTCTGGAGAAATACATTTTCAGGGCCGTCATA | + |
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Preference number: 3 (lower is better) Translates to: PQAFTLQIQGLP*TLEKYIFRAVI Trigger: TATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| 3UTR CCA 72 bp | CCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTaGAGAAATACATTTTCAGGGCCGTCATACGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSLYRYRAFPAL*RNTFSGPSYDD Trigger: ATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | AGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCGAAGAAGTGGCGGCAGCTaGCCCACCACGCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: RQTAELLGVFSPACAGRRRSGGS*PTTQHR Trigger: CCTGTGTTGCGTGGTGGGTCAGCTGCCGCCACTTCT...TCGCCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | GCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCTGTGAGCACGCGTGGTaGTGTTTTCAGTGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: APPVQVGDEAESGGLTSVCEHAW*CFQCQR Trigger: CCTCTGGCACTGAAAACACCACCACGCGTGCTCACA...GACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR GCA 90 bp | GCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCGCTCTCTTTTTAGCCTaGCAACTGCTCGGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APPVQVGDEAESGGLTSVALFLA*QLLGSA Trigger: AGCAGAGCCGAGCAGTTGGCAGGCTAAAAAGAGAGC...GACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073025.12 |
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| CDS-3UTR CCA 90 bp | CCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCCTGCAGTGTGAGCACGCGTaGTGGTGTTTTCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PPVQVGDEAESGGLTSVLQCEHA*WCFQCQ Trigger: CTGGCACTGAAAACACCACCACGCGTGCTCACACTG...CAGGACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATAAGAAGTGGCGGCAGCTaGCCCACCACGCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: QIQGLPCTLEKYIFRAVIRSGGS*PTTQHR Trigger: CCTGTGTTGCGTGGTGGGTCAGCTGCCGCCACTTCT...TATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | ATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAAGAAGTGGCGGCAGCTaGCCCACCACGCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: IAHRQTAELLGVFSPACARSGGS*PTTQHR Trigger: CCTGTGTTGCGTGGTGGGTCAGCTGCCGCCACTTCT...TGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | AGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCGACCGAGCCTGTGGTGGTaGTGGTGTCACAGTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: RQTAELLGVFSPACAGRRPSLWW*WCHSVL Trigger: GAGTACACTGTGACACCATCACCACCACAGGCTCGG...TCGCCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | TTAGCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCACAGTGTGAGCACGCGTaGTGGTGTTTTCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LAPPVQVGDEAESGGLTSQCEHA*WCFQCQ Trigger: CTGGCACTGAAAACACCACCACGCGTGCTCACACTG...TGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCCGAGCCTGTGGTGGTaGTGGTGTCACAATGGAATC | + |
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Preference number: 4 (lower is better) Translates to: HRQTAELLGVFSPACAGRPSLWW*WCHNGI Trigger: GATTCCATTGTGACACCATCACCACCACAGGCTCGG...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078332.13 |
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| CDS-3UTR CCA 90 bp | AGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCGATGTGAGCACGCGTGGTaGTGTTTTCAGTGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RQTAELLGVFSPACAGRRCEHAW*CFQCQR Trigger: CCTCTGGCACTGAAAACACCACCACGCGTGCTCACA...TCGCCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGTCTTCAGGTAGCATATaGGGAGGACAGACCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HRQTAELLGVFSPACAGRSSGSI*GGQTRA Trigger: GGCTCGGGTCTGTCCTCCCCATATGCTACCTGAAGA...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078332.13 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACGATGATGCAGTGTGAGCACGCGTaGTGGTGTTTTCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPSLHSGEIHFQGRHTMMQCEHA*WCFQCQ Trigger: CTGGCACTGAAAACACCACCACGCGTGCTCACACTG...CATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACCACAGTCATGTCATCTaGAGCTCCTTCAATGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PQAFTLQIQGLPCTLEKYHSHVI*SSFNGC Trigger: GCAGCCATTGAAGGAGCTTCAGATGACATGACTGTG...GTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR GCA 90 bp | CCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACGCTCTCTTTTTAGCCTaGCAACTGCTCGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PQAFTLQIQGLPCTLEKYALFLA*QLLGSL Trigger: AAGAGAGCCGAGCAGTTGGCAGGCTAAAAAGAGAGC...GTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR GCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGGCTCTCTTTTTAGCCTaGCAACTGCTCGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRQTAELLGVFSPACAGRALFLA*QLLGSL Trigger: AAGAGAGCCGAGCAGTTGGCAGGCTAAAAAGAGAGC...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | GCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCTATCACACTGGCATTTaGAACTCCATCTTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: APPVQVGDEAESGGLTSVYHTGI*NSILEL Trigger: GAGTTCCAAGATGGAGTTCCAAATGCCAGTGTGATA...GACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | GCCCCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: APPVQVGDEAESGGLTSVLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...GACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACGATGATGGCTCTCTTTTTAGCCTaGCAACTGCTCGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPSLHSGEIHFQGRHTMMALFLA*QLLGSL Trigger: AAGAGAGCCGAGCAGTTGGCAGGCTAAAAAGAGAGC...CATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTGTGAGCACGCGTGGTaGTGTTTTCAGTGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RPSLYRYRAFPALWRNTFCEHAW*CFQCQR Trigger: CCTCTGGCACTGAAAACACCACCACGCGTGCTCACA...AAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCTTCAGGTAGCATATaGGGAGGACAGACCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPSLYRYRAFPALWRNTFSSGSI*GGQTRA Trigger: GGCTCGGGTCTGTCCTCCCCATATGCTACCTGAAGA...AAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CTGCCATTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTAGAAGTGGCGGCAGCTaGCCCACCACGCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: LPFLFRELAVQTGEATKIRSGGS*PTTQHR Trigger: CCTGTGTTGCGTGGTGGGTCAGCTGCCGCCACTTCT...AATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAATGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000162003.8 |
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| CDS-3UTR GCA 90 bp | CAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATAGCTCTCTTTTTAGCCTaGCAACTGCTCGGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QIQGLPCTLEKYIFRAVIALFLA*QLLGSL Trigger: AAGAGAGCCGAGCAGTTGGCAGGCTAAAAAGAGAGC...TATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGTATCACACTGGCATTTaGAACTCCATCTTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: HRQTAELLGVFSPACAGRYHTGI*NSILEL Trigger: GAGTTCCAAGATGGAGTTCCAAATGCCAGTGTGATA...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: PQAFTLQIQGLPCTLEKYLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...GTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: HRQTAELLGVFSPACAGRLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCGACTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RQTAELLGVFSPACAGRRLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...TCGCCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACGATGATGTATCACACTGGCATTTaGAACTCCATCTTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: GPSLHSGEIHFQGRHTMMYHTGI*NSILEL Trigger: GAGTTCCAAGATGGAGTTCCAAATGCCAGTGTGATA...CATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CTGCCATTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTCCGAGCCTGTGGTGGTaGTGGTGTCACAATGGAATC | + |
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Preference number: 4 (lower is better) Translates to: LPFLFRELAVQTGEATKIPSLWW*WCHNGI Trigger: GATTCCATTGTGACACCATCACCACCACAGGCTCGG...AATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAATGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078332.13 ENSMUST00000160744.2 |
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| CDS-3UTR GCA 90 bp | CCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACCATCTAGGTTTGAAATaGCATACATGGAATCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PQAFTLQIQGLPCTLEKYHLGLK*HTWNRF Trigger: GAAACGATTCCATGTATGGCATTTCAAACCTAGATG...GTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160972.8 |
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| CDS-3UTR CCA 90 bp | CAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATATATCACACTGGCATTTaGAACTCCATCTTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QIQGLPCTLEKYIFRAVIYHTGI*NSILEL Trigger: GAGTTCCAAGATGGAGTTCCAAATGCCAGTGTGATA...TATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CTGCCATTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTCAGTGTGAGCACGCGTaGTGGTGTTTTCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLFRELAVQTGEATKIQCEHA*WCFQCQ Trigger: CTGGCACTGAAAACACCACCACGCGTGCTCACACTG...AATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAATGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AACAGCATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSIAHRQTAELLGVFSPALKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...GGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAATGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYRAFPALWRNTFSGPSYLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...GTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTATTTTCTGTGAGCACGCGTGGTaGTGTTTTCAGTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFRELAVQTGEATKIIFCEHAW*CFQCQR Trigger: CCTCTGGCACTGAAAACACCACCACGCGTGCTCACA...GAAAATAATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTGTTTAGAGAATCAGTGTGAGCACGCGTaGTGGTGTTTTCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRQFSKLTLYDCHFCLENQCEHA*WCFQCQ Trigger: CTGGCACTGAAAACACCACCACGCGTGCTCACACTG...ATTCTCTAAACAGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACTTTTCTTTCACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTTCTTCAGGTAGCATATaGGGAGGACAGACCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFSFTDSFLNSLFMTAISSSGSI*GGQTRA Trigger: GGCTCGGGTCTGTCCTCCCCATATGCTACCTGAAGA...AGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTGAAAGAAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078332.13 ENSMUST00000160744.2 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | AGTCAAAACAGCATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCTGAAGCTCCTTCAATaGCTGCATCTAGGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQNSIAHRQTAELLGVFSLKLLQ*LHLGLK Trigger: TTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG...GCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAATGCTGTTTTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR TCA 90 bp | CACTTTTCTTTCACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTTCTTGGGGCAGAATCTaGTCTGTGCCACATGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: HFSFTDSFLNSLFMTAISSWGRI*SVPHGI Trigger: GATTCCATGTGGCACAGATCAGATTCTGCCCCAAGA...AGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTGAAAGAAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CCA 90 bp | CACTTTTCTTTCACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTTATCACACTGGCATTTaGAACTCCATCTTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HFSFTDSFLNSLFMTAISYHTGI*NSILEL Trigger: GAGTTCCAAGATGGAGTTCCAAATGCCAGTGTGATA...AGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTGAAAGAAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CGCCCATCAGCAGCACCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCTCGGCTCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPSAAPQAFTLQIQGLPCSALFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGAGCCGA...GCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGGTGCTGCTGATGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | GGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACGATGATGTCGGCTCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSLHSGEIHFQGRHTMMSALFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGAGCCGA...CATCATCGTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CCGCCTGTGCAGGTAGGCGATGAAGCAGAGTCAGGTGGTTTGACTTCAGTCCTGCTTCGCTTTGAGGAGTaGGAAGTGGTCTTTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPVQVGDEAESGGLTSVLLRFEE*EVVFLN Trigger: ATTTAGAAAGACCACTTCCAACTCCTCAAAGCGAAG...CAGGACTGAAGTCAAACCACCTGACTCTGCTTCATCGCCTACCTGCACAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | AGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACTCGGCTCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RYRAFPALWRNTFSGPSYSALFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGAGCCGA...GTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CGCCCATCAGCAGCACCACAGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCTCAATGACTGGAACCTaGAAATTTTATTTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSAAPQAFTLQIQGLPCSMTGT*KFYFLG Trigger: CCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGA...GCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCTGTGGTGCTGCTGATGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCCCCGCCTGTGCAGGTAGGCTTCGCTTTGAGGAGTaGGAAGTGGTCTTTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HRQTAELLGVFSPACAGRLRFEE*EVVFLN Trigger: ATTTAGAAAGACCACTTCCAACTCCTCAAAGCGAAG...CCTACCTGCACAGGCGGGGCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATATGGCTGCATCTAGGTTaGAAATGCCATACGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: QIQGLPCTLEKYIFRAVIWLHLG*KCHTCT Trigger: AGTACACGTATGGCATTTCAAACCTAGATGCAGCCA...TATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161648.8 |
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| CDS-3UTR CAA 90 bp | AGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTTCAGGGCCGTCATACCTTCGCTTTGAGGAGTaGGAAGTGGTCTTTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RYRAFPALWRNTFSGPSYLRFEE*EVVFLN Trigger: ATTTAGAAAGACCACTTCCAACTCCTCAAAGCGAAG...GTATGACGGCCCTGAAAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS CCA 90 bp | GGTGGTGATGGTGTCACAGTGTACTCCGGTGCAGAAATCAATGACTaGAACCTTGAAATTTTATTTCTTGGGGCAGAATCTGATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGDGVTVYSGAEIND*NLEILFLGAESDLC Trigger: GCACAGATCAGATTCTGCCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGATTTCTGCACCGGAGTACACTGTGACACCATCACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | AGGCCTTCACTCTACAGATACAGGGCCTTCCCTGCACTCTGGAGAAATACATTTCTTCGCTTTGAGGAGTaGGAAGTGGTCTTTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPSLYRYRAFPALWRNTFLRFEE*EVVFLN Trigger: ATTTAGAAAGACCACTTCCAACTCCTCAAAGCGAAG...AAATGTATTTCTCCAGAGTGCAGGGAAGGCCCTGTATCTGTAGAGTGAAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS CCA 90 bp | AGGTTTGAAATGCCATACGTGTACTCCGGTGCAGAAATCAATGACTaGAACCTTGAAATTTTATTTCTTGGGGCAGAATCTGATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFEMPYVYSGAEIND*NLEILFLGAESDLC Trigger: GCACAGATCAGATTCTGCCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGATTTCTGCACCGGAGTACACGTATGGCATTTCAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161648.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTATTTTCGCTCTGCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFRELAVQTGEATKIIFALLFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGCAGAGC...GAAAATAATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073025.12 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTGTTTAGAGAATTCGGCTCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRQFSKLTLYDCHFCLENSALFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGAGCCGA...ATTCTCTAAACAGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGTTTAGAGAATTAGCTGTACAGACTGGTGAGGCCACAAAAATTATTTTCTCGGCTCTCTTCGCTTaGAGGAGTTGGAAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFRELAVQTGEATKIIFSALFA*RSWKWS Trigger: AGACCACTTCCAACTCCTCAAAGCGAAGAGAGCCGA...GAAAATAATTTTTGTGGCCTCACCAGTCTGTACAGCTAATTCTCTAAACAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTGTTTAGAGAATTGGCTGCATCTAGGTTaGAAATGCCATACCTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HRQFSKLTLYDCHFCLENWLHLG*KCHTCG Trigger: ACCGCAGGTATGGCATTTCAAACCTAGATGCAGCCA...ATTCTCTAAACAGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160744.2 |
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| CDS-3UTR CAA 90 bp | AGTCAAAACAGCATTGCACACAGACAGACTGCTGAACTGTTAGGAGTTTTTAGCTCAATGACTGGAACCTaGAAATTTTATTTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQNSIAHRQTAELLGVFSSMTGT*KFYFLG Trigger: CCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGA...GCTAAAAACTCCTAACAGTTCAGCAGTCTGTCTGTGTGCAATGCTGTTTTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS-3UTR CAA 90 bp | CACTTTTCTTTCACAGACAGTTTTCTAAACTCACTCTTTATGACTGCCATTTCTCTTCGCTTTGAGGAGTaGGAAGTGGTCTTTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HFSFTDSFLNSLFMTAISLRFEE*EVVFLN Trigger: ATTTAGAAAGACCACTTCCAACTCCTCAAAGCGAAG...AGAAATGGCAGTCATAAAGAGTGAGTTTAGAAAACTGTCTGTGAAAGAAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000073025.12 ENSMUST00000078332.13 ENSMUST00000160786.8 ENSMUST00000160972.8 ENSMUST00000161648.8 ENSMUST00000162003.8 |
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| CDS GCA 72 bp | CTGAAGCTCCTTCAATGGCTGCATCTAGGTTTGAAATaGCATACGTGTACTCCGGTGCAGAAATCAATGACT | + |
|
Preference number: 6 (lower is better) Translates to: LKLLQWLHLGLK*HTCTPVQKSMT Trigger: AGTCATTGATTTCTGCACCGGAGTACACGTATGGCATTTCAAACCTAGATGCAGCCATTGAAGGAGCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161648.8 |
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| CDS CAA 90 bp | ATGGTGTCACAGTGTACTCCGGTGCAGAAATCAATGACTGGAACCTaGAAATTTTATTTCTTGGGGCAGAATCTGATCTGTGCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: MVSQCTPVQKSMTGT*KFYFLGQNLICATW Trigger: CCATGTGGCACAGATCAGATTCTGCCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGATTTCTGCACCGGAGTACACTGTGACACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162003.8 |
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| CDS CAA 90 bp | AAATGCCATACGTGTACTCCGGTGCAGAAATCAATGACTGGAACCTaGAAATTTTATTTCTTGGGGCAGAATCTGATCTGTGCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: KCHTCTPVQKSMTGT*KFYFLGQNLICATW Trigger: CCATGTGGCACAGATCAGATTCTGCCCCAAGAAATAAAATTTCAAGGTTCCAGTCATTGATTTCTGCACCGGAGTACACGTATGGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161648.8 |
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