Pregenerated sensors for MFAP3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031647Ensembl transcript IDs: ENSMUST00000034066.4, ENSMUST00000160719.8, ENSMUST00000161421.2, ENSMUST00000161702.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCAGAGTTCATTCCAGGTTGCCCTGTCTTACAGAGAAGGAAACTaGGGCCCAGCCTTGCCAAAAGCCTGGCAGCTGGTTATTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: PQSSFQVALSYREGN*GPALPKAWQLVIGT Trigger: TGTGCCAATAACCAGCTGCCAGGCTTTTGGCAAGGCTGGGCCTCAGTTTCCTTCTCTGTAAGACAGGGCAACCTGGAATGAACTCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | CTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATaGTCTCTACAGTTCAGATCACACGGACAGACCCCTGCTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: LLAKRASPLKEFGRE*SLQFRSHGQTPAPS Trigger: AGATGGAGCAGGGGTCTGTCCGTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR TCA 90 bp | ACTGTTCGCCGAGCCACTAGTTTTGCTGCCTTATATCTACGGAGCTaGCAATATCTTATGGATCCTGCAAGGCCTTGTGGGAAGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: TVRRATSFAALYLRS*QYLMDPARPCGKVM Trigger: CATCACCTTCCCACAAGGCCTTGCAGGATCCATAAGATATTGTCAGCTCCGTAGATATAAGGCAGCAAAACTAGTGGCTCGGCGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | AGTTTAACTATTGGGTTCTTTTCTTCTGAATGTGATGCCATTAGGTaGGGGCGAGGTGCCCTCAGAGTTCATTCCAGGTTGCCCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: SLTIGFFSSECDAIR*GRGALRVHSRLPCL Trigger: AAGACAGGGCAACCTGGAATGAACTCTGAGGGCACCTCGCCCCCACCTAATGGCATCACATTCAGAAGAAAAGAACCCAATAGTTAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | GGTGATGTGCTATACCTTCAGGAAATCACCAGACATCTCTGTCTTTaGCAGGAAATCTCCCAGGGAAAGAACCTGTCTTCGTTTGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GDVLYLQEITRHLCL*QEISQGKNLSSFGL Trigger: AAGACCAAACGAAGACAGGTTCTTTCCCTGGGAGATTTCCTGCCAAAGACAGAGATGTCTGGTGATTTCCTGAAGGTATAGCACATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTCAATaGGACTCCATGAATAATTCTAAGAATGGGGTTCACTTCTGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RVCVCVCVCVCVYVQ*DSMNNSKNGVHFWG Trigger: CCCCCAGAAGTGAACCCCATTCTTAGAATTATTCATGGAGTCCCATTGAACATACACACACACACACACACACACACACACACACACACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | ACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTaGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGT | + |
|
Preference number: 1 (lower is better) Translates to: TGLLNSERLTTIVYS*PKGHHHLRNLAENG Trigger: ACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR TCA 90 bp | GAGATTCTTATCCCAAGAACAGCTGGTGCCTTAAAGAGGAAGGTTTaGAAATTATCCCCTTACTCTCTATCCCACTGCAGGCTAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: EILIPRTAGALKRKV*KLSPYSLSHCRLKN Trigger: ATTCTTTAGCCTGCAGTGGGATAGAGAGTAAGGGGATAATTTTCAAACCTTCCTCTTTAAGGCACCAGCTGTTCTTGGGATAAGAATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | GGCAGCTGGTTATTGGCACAGTCAAGTATTAAACCTGTGAATGGCTaGTTTGTGTTTTCTCTAATATCAAGCTACCTTACACATCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: GSWLLAQSSIKPVNG*FVFSLISSYLTHPA Trigger: TGCAGGATGTGTAAGGTAGCTTGATATTAGAGAAAACACAAACCAGCCATTCACAGGTTTAATACTTGACTGTGCCAATAACCAGCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 90 bp | GCAGCCTCTGAAGTTATAACTCCATCATGCCCATCACACACTATGTaGCTTCTGATCTCTGTTTTAAAGTTTCAGTCTCCCTTGTTTGTA | + |
|
Preference number: 1 (lower is better) Translates to: AASEVITPSCPSHTM*LLISVLKFQSPLFV Trigger: TACAAACAAGGGAGACTGAAACTTTAAAACAGAGATCAGAAGCCACATAGTGTGTGATGGGCATGATGGAGTTATAACTTCAGAGGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR GCA 90 bp | GCCATAACTAGATTCATTCCTCTTGTGTTCTCACTGGCTCTCATTTaGCCTTTAGAAGGATGTGCTCAGTTAAAGAAGGGACAAATAAGA | + |
|
Preference number: 1 (lower is better) Translates to: AITRFIPLVFSLALI*PLEGCAQLKKGQIR Trigger: TCTTATTTGTCCCTTCTTTAACTGAGCACATCCTTCTAAAGGGCAAATGAGAGCCAGTGAGAACACAAGAGGAATGAATCTAGTTATGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR CCA 90 bp | CCTTTATTAAAGCAACAATCAGACTACAGGATGGATCACAAGCCATaGTTTCTCTTTACTACAGTGATACCAACTTCTAGCTTAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: PLLKQQSDYRMDHKP*FLFTTVIPTSSLVI Trigger: AATGACTAAGCTAGAAGTTGGTATCACTGTAGTAAAGAGAAACCATGGCTTGTGATCCATCCTGTAGTCTGATTGTTGCTTTAATAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR TCA 90 bp | AACCTGTCTTCGTTTGGTCTTACACTTACATGTAAACCATTTTCATaGGTGCTACTGGTATATCTAAACATTTACAATCTCACTGGATAC | + |
|
Preference number: 1 (lower is better) Translates to: NLSSFGLTLTCKPFS*VLLVYLNIYNLTGY Trigger: GTATCCAGTGAGATTGTAAATGTTTAGATATACCAGTAGCACTCATGAAAATGGTTTACATGTAAGTGTAAGACCAAACGAAGACAGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCCTCTTACCTAAGGGATaGGCGTCTCCTGGTAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SHGQTPAPSYQFCTPALFLLPKG*ASPGKA Trigger: AGCCTTACCAGGAGACGCTCATCCCTTAGGTAAGAG...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGTGATACTGTTCGCCGAGCCACTAGTTTTGCTGCCTTATATCTACGGAGATACCACAGCTGAATaGTCTCAGAACTGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DLVILFAEPLVLLPYIYGDTTAE*SQNWAG Trigger: GCCTGCCCAGTTCTGAGAGCATTCAGCTGTGGTATC...TCCGTAGATATAAGGCAGCAAAACTAGTGGCTCGGCGAACAGTATCACCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTCAGATCCTTTTCACTaGGGTGATTCCAGTCACGTG | + |
|
Preference number: 2 (lower is better) Translates to: RSHGQTPAPSYQFCTPALSDPFH*GDSSHV Trigger: CACGTGACTGGAATCACCCCAGTGAAAAGGATCTGA...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACTCAGATCCTTTTCACTaGGGTGATTCCAGTCACGTG | + |
|
Preference number: 2 (lower is better) Translates to: KAMQYALDRAPELRTSYNSDPFH*GDSSHV Trigger: CACGTGACTGGAATCACCCCAGTGAAAAGGATCTGA...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR CAA 90 bp | GACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTaGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: DRAPELRTSYNNSVL*AKRASPLKEFGREW Trigger: CCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAACTCTTACCTAAGGGATaGGCGTCTCCTGGTAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: NSVLLAKRASPLKEFGRELLPKG*ASPGKA Trigger: AGCCTTACCAGGAGACGCTCATCCCTTAGGTAAGAG...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR CAA 90 bp | GCTGGGATCGAATGTTACACTTTTAAAACTGCCCAAATGAGTCTGTaGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: AGIECYTFKTAQMSL*HVCVCVCVCVCVCM Trigger: CATACACACACACACACACACACACACACACACACACACGTGCAACAGACTCATTTGGGCAGTTTTAAAAGTGTAACATTCGATCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CAA 90 bp | GGAGATTCTTATCCCAAGAACAGCTGGTGCCTTAAAGAGGAAGGTTaGAAAATTATCCCCTTACTCTCTATCCCACTGCAGGCTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GDSYPKNSWCLKEEG*KIIPLLSIPLQAKE Trigger: TTCTTTAGCCTGCAGTGGGATAGAGAGTAAGGGGATAATTTTCAAACCTTCCTCTTTAAGGCACCAGCTGTTCTTGGGATAAGAATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGAGGATGTGCTAAGTCATATGGAGGAAAGCAGTTGAATGTACTGAGATCCAAAGATTGGGATTaGATGTTGAGTGCTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: FLRGCAKSYGGKQLNVLRSKDWD*MLSAGI Trigger: GATCCCAGCACTCAACATTCAATCCCAATCTTTGGA...TCTCAGTACATTCAACTGCTTTCCTCCATATGACTTAGCACATCCTCTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTAGGTTATTTTCCTCATCTTGCAATGCCCAACAAGTCAAGTATTCAGTCTCAGATCCTTTTCACTaGGGTGATTCCAGTCACGTG | + |
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Preference number: 2 (lower is better) Translates to: SSRLFSSSCNAQQVKYSVSDPFH*GDSSHV Trigger: CACGTGACTGGAATCACCCCAGTGAAAAGGATCTGA...GACTGAATACTTGACTTGTTGGGCATTGCAAGATGAGGAAAATAACCTAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | TCATTCCAGGTTGCCCTGTCTTACAGAGAAGGAAACTaGGGCCCAGCCTTGCCAAAAGCCTGGCAGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SFQVALSYREGN*GPALPKAWQLV Trigger: AACCAGCTGCCAGGCTTTTGGCAAGGCTGGGCCTCAGTTTCCTTCTCTGTAAGACAGGGCAACCTGGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR GCA 72 bp | ATGCCCTACCCTTTGTGTGCAATAGAACTGAGCAGATaGCACAAGGCCAGTGAATGGCAACCTGAACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: MPYPLCAIELSR*HKASEWQPEPG Trigger: CCCAGGTTCAGGTTGCCATTCACTGGCCTTGTGGCATCTGCTCAGTTCTATTGCACACAAAGGGTAGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR CCA 72 bp | AGTTCTGTACCCCAGCACTCTTCAGATCCTTTTCACTaGGGTGATTCCAGTCACGTGAACTCCATGCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: SSVPQHSSDPFH*GDSSHVNSMQA Trigger: CGCCTGCATGGAGTTCACGTGACTGGAATCACCCCAGTGAAAAGGATCTGAAGAGTGCTGGGGTACAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR GCA 72 bp | ATGGTCTCTACAGTTCAGATCACACGGACAGACCCCTaGTCCATCTTATCAGTTCTGTACCCCAGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: MVSTVQITRTDP*SILSVLYPSTL Trigger: AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTGAACTGTAGAGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR CCA 72 bp | ATTGGGTTCTTTTCTTCTGAATGTGATGCCATTAGGTaGGGGCGAGGTGCCCTCAGAGTTCATTCCAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: IGFFSSECDAIR*GRGALRVHSRL Trigger: CAACCTGGAATGAACTCTGAGGGCACCTCGCCCCCACCTAATGGCATCACATTCAGAAGAAAAGAACCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | CGAGCCACTAGTTTTGCTGCCTTATATCTACGGAGCTaGCAATATCTTATGGATCCTGCAAGGCCTTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RATSFAALYLRS*QYLMDPARPCG Trigger: CCCACAAGGCCTTGCAGGATCCATAAGATATTGTCAGCTCCGTAGATATAAGGCAGCAAAACTAGTGGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 72 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATaGTCTCTACAGTTCAGATCACACGGACAGACCCCT | + |
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Preference number: 3 (lower is better) Translates to: KRASPLKEFGRE*SLQFRSHGQTP Trigger: AGGGGTCTGTCCGTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR CCA 72 bp | GAGCTGACAATATCTTATGGATCCTGCAAGGCCTTGTaGGAAGGTGATGTGCTATACCTTCAGGAAATCACC | + |
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Preference number: 3 (lower is better) Translates to: ELTISYGSCKAL*EGDVLYLQEIT Trigger: GGTGATTTCCTGAAGGTATAGCACATCACCTTCCCACAAGGCCTTGCAGGATCCATAAGATATTGTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | ATCCCAAGAACAGCTGGTGCCTTAAAGAGGAAGGTTTaGAAATTATCCCCTTACTCTCTATCCCACTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: IPRTAGALKRKV*KLSPYSLSHCR Trigger: CCTGCAGTGGGATAGAGAGTAAGGGGATAATTTTCAAACCTTCCTCTTTAAGGCACCAGCTGTTCTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 72 bp | GCATTACATATGACTTACAGATATCAACTGTGTCAGTaGCTGACACCCAAGACTCTGAGGTCAACCCTACTC | + |
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Preference number: 3 (lower is better) Translates to: ALHMTYRYQLCQ*LTPKTLRSTLL Trigger: GAGTAGGGTTGACCTCAGAGTCTTGGGTGTCAGCCACTGACACAGTTGATATCTGTAAGTCATATGTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR-3UTR CAA 90 bp | TCATCTAGGTTATTTTCCTCATCTTGCAATGCCCAACAAGTCAAGTATTCAGTCCAGACATCTCTGTCTTaGGCAGGAAATCTCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SSRLFSSSCNAQQVKYSVQTSLS*AGNLPG Trigger: CCCTGGGAGATTTCCTGCCAAAGACAGAGATGTCTG...GACTGAATACTTGACTTGTTGGGCATTGCAAGATGAGGAAAATAACCTAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | AATATCTTATGGATCCTGCAAGGCCTTGTGGGAAGGTaGTGTGCTATACCTTCAGGAAATCACCAGACATCT | + |
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Preference number: 3 (lower is better) Translates to: NILWILQGLVGR*CAIPSGNHQTS Trigger: AGATGTCTGGTGATTTCCTGAAGGTATAGCACATCACCTTCCCACAAGGCCTTGCAGGATCCATAAGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | TCTGTATGGAATGGGTACCTTGCCCTGCAGTTTCCATaGGGAATTCTACACATGGGTTTGGATAGAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: SVWNGYLALQFP*GILHMGLDRMR Trigger: TCTCATTCTATCCAAACCCATGTGTAGAATTCCTCATGGAAACTGCAGGGCAAGGTACCCATTCCATACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR TCA 72 bp | TTTGTAAGCACCCCAGACATTCTGGCTGTAATGACATaGCAAAACAATGCTTGGCTTGGGTGGGAACATTCA | + |
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Preference number: 3 (lower is better) Translates to: FVSTPDILAVMT*QNNAWLGWEHS Trigger: TGAATGTTCCCACCCAAGCCAAGCATTGTTTTGTCATGTCATTACAGCCAGAATGTCTGGGGTGCTTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR GCA 72 bp | CCAGTGAATGGCAACCTGAACCTGGGATTTAAAGCATaGCCCCAATCTGTTAATGTGATTTACCTAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PVNGNLNLGFKA*PQSVNVIYLSH Trigger: ATGGCTTAGGTAAATCACATTAACAGATTGGGGGCATGCTTTAAATCCCAGGTTCAGGTTGCCATTCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR TCA 72 bp | TATCTAAACATTTACAATCTCACTGGATACCACAGCTaGATGCTCTCAGAACTGGGCAGGCAGGTAAACGTT | + |
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Preference number: 3 (lower is better) Translates to: YLNIYNLTGYHS*MLSELGRQVNV Trigger: AACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAGCTGTGGTATCCAGTGAGATTGTAAATGTTTAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 72 bp | CTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTaGCCAAAAGGGCATCACCACTTAAGGAATTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LNSERLTTIVYS*PKGHHHLRNLA Trigger: TGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR TCA 72 bp | ACTCCATTAGGAAAGAACGGCGAAGATAATTCAAACTaGCAACAAAGTGCAACAAACCCATGTGTGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: TPLGKNGEDNSN*QQSATNPCVSL Trigger: AAGGCTCACACATGGGTTTGTTGCACTTTGTTGTCAGTTTGAATTATCTTCGCCGTTCTTTCCTAATGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| 3UTR GCA 72 bp | GTTCTCACTGGCTCTCATTTGCCCTTTAGAAGGATGTaGTCAGTTAAAGAAGGGACAAATAAGATAACGAAG | + |
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Preference number: 3 (lower is better) Translates to: VLTGSHLPFRRM*SVKEGTNKITK Trigger: CTTCGTTATCTTATTTGTCCCTTCTTTAACTGAGCACATCCTTCTAAAGGGCAAATGAGAGCCAGTGAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| 3UTR CCA 72 bp | GAAGTTATAACTCCATCATGCCCATCACACACTATGTaGCTTCTGATCTCTGTTTTAAAGTTTCAGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: EVITPSCPSHTM*LLISVLKFQSP Trigger: GGGAGACTGAAACTTTAAAACAGAGATCAGAAGCCACATAGTGTGTGATGGGCATGATGGAGTTATAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 72 bp | GAAGGCTCTGCTGTGGAATATCCAGAGCATAGACTTTaGATAGAGAAATTCCATATGAAGCTAAGCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: EGSAVEYPEHRL*IEKFHMKLSSF Trigger: AAAGGAGCTTAGCTTCATATGGAATTTCTCTATCCAAAGTCTATGCTCTGGATATTCCACAGCAGAGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CCA 72 bp | CCTTTTAAAGTAGGAGATTCTTATCCCAAGAACAGCTaGTGCCTTAAAGAGGAAGGTTTGAAAATTATCCCC | + |
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Preference number: 3 (lower is better) Translates to: PFKVGDSYPKNS*CLKEEGLKIIP Trigger: GGGGATAATTTTCAAACCTTCCTCTTTAAGGCACCAGCTGTTCTTGGGATAAGAATCTCCTACTTTAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGAAACATTCTTTGGCCATACATCTTATTTCATAGTAAATTGGCCTCCTTTAACAATAGTGTACTCTaGGCCAAAAGGGCATCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TGNILWPYILFHSKLASFNNSVL*AKRASP Trigger: TGGTGATGCCCTTTTGGCCAAGAGTACACTATTGTT...AAAGGAGGCCAATTTACTATGAAATAAGATGTATGGCCAAAGAATGTTTCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| 3UTR TCA 72 bp | ATGACTACAGCAGATCCAAAGATTGGGATTGAATGTTaGGTGCTGGGATCGAATGTTACACTTTTAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: MTTADPKIGIEC*VLGSNVTLLKL Trigger: CAGTTTTAAAAGTGTAACATTCGATCCCAGCACTCAACATTCAATCCCAATCTTTGGATCTGCTGTAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGGGACTGGGGGTGAACTaGAACCTTGATGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSRGHHSYLRDERLLGLGVN*NLDGNL Trigger: CAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCC...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATCTATCTGGGGCTTCCTaGCCTTCTGGGGTATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSMQASSLSRGHHSYLRDLSGAS*PSGVCL Trigger: GAGGCATACCCCAGAAGGCCAGGAAGCCCCAGATAG...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGCCACCGTCCAGCATTTaGCATTTTCCTCCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSRGHHSYLRDERLLPPSSI*HFPPPF Trigger: GAAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGG...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTGCCTCACAAAATTCTaGCCCTGCTCCTCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFCLTKF*PCSSSP Trigger: CGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCA...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATCAGTCCTCGTTCTGGTaGCTCTACAGGAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSMQASSLSRGHHSYLRDQSSFW*LYRRRL Trigger: GAGACGTCTCCTGTAGAGGCACCAGAACGAGGACTG...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTGCAGGGGCACGCTCCTaGCAAGCTCTTCAATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: DHTDRPLLHLISSVPQHSAGARS*QALQCT Trigger: GGTACATTGAAGAGCTTGCCAGGAGCGTGCCCCTGC...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTHPSQR*GTHFAS Trigger: TGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATG...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFHPSQR*GTHFAS Trigger: TGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATG...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTCCTGGTCATCCACATaGTCCCTTTTGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFSWSST*SLLDWG Trigger: CCCCCAGTCCAAAAGGGATCATGTGGATGACCAGGA...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTGGTCAGTTCTGGCAATaGTTACGGGCACAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITRTDPCSILSVLYPSTLGQFWQ*LRAQSP Trigger: TGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACC...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCAGAAAGACACCTTGGTaGTGTTCAGGAGGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSHGQTPAPSYQFCTPALRKTPW*CSGGHR Trigger: ACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCT...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTACAAAATTCTGCCCCTaGTCCTCCAGCCCGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTTKFCP*SSSPTT Trigger: AGTAGTCGGGCTGGAGGAGCAGGGGCAGAATTTTGT...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTCTATCTGGGGCTTCCTaGCCTTCTGGGGTATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSLSGAS*PSGVCL Trigger: GAGGCATACCCCAGAAGGCCAGGAAGCCCCAGATAG...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGTACCTCGTCCCTATCTaGGGCTTCCTGGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLYLVPI*GFLAFW Trigger: CCAGAAGGCCAGGAAGCCCCAGATAGGGACGAGGTA...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| 3UTR CAA 72 bp | GAGGCCCAGCCTTGCCAAAAGCCTGGCAGCTGGTTATaGGCACAGTCAAGTATTAAACCTGTGAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAQPCQKPGSWL*AQSSIKPVNGW Trigger: CCAGCCATTCACAGGTTTAATACTTGACTGTGCCAATAACCAGCTGCCAGGCTTTTGGCAAGGCTGGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTGGACTGGGGGTGAACTaGAACCTTGATGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITRTDPCSILSVLYPSTLGLGVN*NLDGNL Trigger: CAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCC...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTTTGGACTGGGGGTaGACTGAAACCTTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTLLDWG*TETLMA Trigger: TGCCATCAAGGTTTCAGTTCACCCCCAGTCCAAAAG...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCCTTTTGGACTGGGGGTaGACTGAAACCTTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFLLDWG*TETLMA Trigger: TGCCATCAAGGTTTCAGTTCACCCCCAGTCCAAAAG...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTTGGGGAATGTTCCTCTaGTGGTTCTGTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTWGMFL*WFCLLF Trigger: GAAGAGGAGACAGAACCATCAGAGGAACATTCCCCA...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACTGCCTCACAAAATTCTaGCCCTGCTCCTCCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAMQYALDRAPELRTSYNCLTKF*PCSSSP Trigger: CGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCA...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTGTCTGTAGAAGGCTCTaGAGTCTCTGGGGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DHTDRPLLHLISSVPQHSVCRRL*SLWGMF Trigger: GAACATTCCCCAGAGACTGCAGAGCCTTCTACAGAC...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACGCAGGGGCACGCTCCTaGCAAGCTCTTCAATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KAMQYALDRAPELRTSYNAGARS*QALQCT Trigger: GGTACATTGAAGAGCTTGCCAGGAGCGTGCCCCTGC...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTGGCTTCCTGGCCTTCTaGGGTATGCCTCACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DHTDRPLLHLISSVPQHSGFLAF*GMPHKI Trigger: AATTTTGTGAGGCATACCCCAGAAGGCCAGGAAGCC...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTGGCCCTATCTGGGGCTTCCTaGCCTTCTGGGGTATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDRAPELRTSYNNSVLLALSGAS*PSGVCL Trigger: GAGGCATACCCCAGAAGGCCAGGAAGCCCCAGATAG...GGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTAGAAAGACACCTTGGTaGTGTTCAGGAGGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSRKTPW*CSGGHR Trigger: ACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCT...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGGGACTGGGGGTGAACTaGAACCTTGATGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLGLGVN*NLDGNL Trigger: CAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCC...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACTCCTGGTCATCCACATaGTCCCTTTTGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAMQYALDRAPELRTSYNSWSST*SLLDWG Trigger: CCCCCAGTCCAAAAGGGATCATGTGGATGACCAGGA...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTCTCCTCTTCATCTTTaGCCTCAAAGTGTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFSPLHL*PQSVLP Trigger: AGGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGA...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATCCAAGACCACATCAGTaGCATTTAAAGTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSMQASSLSRGHHSYLRDPRPHQ*HLKCCW Trigger: CCAACAGCACTTTAAATGGCACTGATGTGGTCTTGG...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGGCCATAGATGTTAGATaGCACACATGTGTATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSRGHHSYLRDERLLAIDVR*HTCVFT Trigger: GGTAAATACACATGTGTGGCATCTAACATCTATGGC...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATATCTCAAAAGCCTTCTaGAGCTTCTCTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSMQASSLSRGHHSYLRDISKAF*SFSAPS Trigger: AGAAGGTGCAGAGAAGCTGCAGAAGGCTTTTGAGAT...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACCAGTCCTCGTTCTGGTaGCTCTACAGGAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAMQYALDRAPELRTSYNQSSFW*LYRRRL Trigger: GAGACGTCTCCTGTAGAGGCACCAGAACGAGGACTG...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTGGCTTCCTGGCCTTCTaGGGTATGCCTCACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ITRTDPCSILSVLYPSTLGFLAF*GMPHKI Trigger: AATTTTGTGAGGCATACCCCAGAAGGCCAGGAAGCC...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCCTATCTGGGGCTTCCTaGCCTTCTGGGGTATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLLSGAS*PSGVCL Trigger: GAGGCATACCCCAGAAGGCCAGGAAGCCCCAGATAG...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTCAGTGAGTTGGGGATaGTGTATACCTCGTCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHGQTPAPSYQFCTPALFSVSWG*CIPRPY Trigger: ATAGGGACGAGGTATACACCATCCCCAACTCACTGA...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLHPSQR*GTHFAS Trigger: TGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATG...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGTATTTACCTCTGTCTaGGAAAGACACCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSMQASSLSRGHHSYLRDVFTSV*ERHLGD Trigger: ATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATAC...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGGTGATACTGTTCGCCGAGCCACTAGTTTTGCTGCCTTATATCTACGGACTTTTGGACTGGGGGTaGACTGAAACCTTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLVILFAEPLVLLPYIYGLLDWG*TETLMA Trigger: TGCCATCAAGGTTTCAGTTCACCCCCAGTCCAAAAG...TCCGTAGATATAAGGCAGCAAAACTAGTGGCTCGGCGAACAGTATCACCAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTGGGGAATGTTCCTCTaGTGGTTCTGTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSWGMFL*WFCLLF Trigger: GAAGAGGAGACAGAACCATCAGAGGAACATTCCCCA...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTCCACCGTCCAGCATTTaGCATTTTCCTCCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSPPSSI*HFPPPF Trigger: GAAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGG...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCATCTCAAAAGCCTTCTaGAGCTTCTCTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHGQTPAPSYQFCTPALISKAF*SFSAPS Trigger: AGAAGGTGCAGAGAAGCTGCAGAAGGCTTTTGAGAT...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTGGCCACAAAATTCTGCCCCTaGTCCTCCAGCCCGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LDRAPELRTSYNNSVLLATKFCP*SSSPTT Trigger: AGTAGTCGGGCTGGAGGAGCAGGGGCAGAATTTTGT...GGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTGTCTGTAGAAGGCTCTaGAGTCTCTGGGGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSVCRRL*SLWGMF Trigger: GAACATTCCCCAGAGACTGCAGAGCCTTCTACAGAC...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGGGCTTCCTGGCCTTCTaGGGTATGCCTCACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLGFLAF*GMPHKI Trigger: AATTTTGTGAGGCATACCCCAGAAGGCCAGGAAGCC...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | GCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATCACACCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASPLKEFGREWSLQFRSHHPSQR*GTHFAS Trigger: TGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATG...GTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGGTCAGTTCTGGCAATaGTTACGGGCACAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKGHHHLRNLAENGLYSSGQFWQ*LRAQSP Trigger: TGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACC...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCGTATTTACCTCTGTCTaGGAAAGACACCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHGQTPAPSYQFCTPALVFTSV*ERHLGD Trigger: ATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATAC...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCATCCTGGTCATCCACATaGTCCCTTTTGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKGHHHLRNLAENGLYSSSWSST*SLLDWG Trigger: CCCCCAGTCCAAAAGGGATCATGTGGATGACCAGGA...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTCTCCTCTTCATCTTTaGCCTCAAAGTGTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSSPLHL*PQSVLP Trigger: AGGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGA...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCACAAAATTCTGCCCCTaGTCCTCCAGCCCGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLTKFCP*SSSPTT Trigger: AGTAGTCGGGCTGGAGGAGCAGGGGCAGAATTTTGT...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACGTCTGTAGAAGGCTCTaGAGTCTCTGGGGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAMQYALDRAPELRTSYNVCRRL*SLWGMF Trigger: GAACATTCCCCAGAGACTGCAGAGCCTTCTACAGAC...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | GCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATCACACCAGTCCTCGTTCTGGTaGCTCTACAGGAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPLKEFGREWSLQFRSHQSSFW*LYRRRL Trigger: GAGACGTCTCCTGTAGAGGCACCAGAACGAGGACTG...GTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATACCTCGTCCCTATCTaGGGCTTCCTGGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVLLAKRASPLKEFGREYLVPI*GFLAFW Trigger: CCAGAAGGCCAGGAAGCCCCAGATAGGGACGAGGTA...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATACCTCGTCCCTATCTaGGGCTTCCTGGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRASPLKEFGREWSLQFRYLVPI*GFLAFW Trigger: CCAGAAGGCCAGGAAGCCCCAGATAGGGACGAGGTA...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGTCAGTGAGTTGGGGATaGTGTATACCTCGTCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLSVSWG*CIPRPY Trigger: ATAGGGACGAGGTATACACCATCCCCAACTCACTGA...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGGTGATACTGTTCGCCGAGCCACTAGTTTTGCTGCCTTATATCTACGGATCAGTCTTCTTTAGGTaGCTGCTCATCATACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLVILFAEPLVLLPYIYGSVFFR*LLIIHR Trigger: CCTGTGTATGATGAGCAGTCACCTAAAGAAGACTGA...TCCGTAGATATAAGGCAGCAAAACTAGTGGCTCGGCGAACAGTATCACCAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| CDS-3UTR TCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTCAGTCTTCTTTAGGTaGCTGCTCATCATACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSSVFFR*LLIIHR Trigger: CCTGTGTATGATGAGCAGTCACCTAAAGAAGACTGA...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTCAAATTCCATGGTTTTaGACTGAGTCACTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DHTDRPLLHLISSVPQHSQIPWF*TESLWQ Trigger: TTGCCAAAGTGACTCAGTTCAAAACCATGGAATTTG...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCAAATTCCATGGTTTTaGACTGAGTCACTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTQIPWF*TESLWQ Trigger: TTGCCAAAGTGACTCAGTTCAAAACCATGGAATTTG...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCCAAATTCCATGGTTTTaGACTGAGTCACTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHGQTPAPSYQFCTPALQIPWF*TESLWQ Trigger: TTGCCAAAGTGACTCAGTTCAAAACCATGGAATTTG...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATCCTGGTCATCCACATaGTCCCTTTTGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVLLAKRASPLKEFGRESWSST*SLLDWG Trigger: CCCCCAGTCCAAAAGGGATCATGTGGATGACCAGGA...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGCCAAGACCACATCAGTaGCATTTAAAGTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLPRPHQ*HLKCCW Trigger: CCAACAGCACTTTAAATGGCACTGATGTGGTCTTGG...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR GCA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTTCTCTTTCAGCAGCTTaGCAACAGAATTATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QITRTDPCSILSVLYPSTSLSAA*QQNYTT Trigger: AGTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGA...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR CCA 90 bp | CTGAATGCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTTGACTCTTAAATACCTCGTCCCTATCTaGGGCTTCCTGGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNALRTGQAGKRFYLTLKYLVPI*GFLAFW Trigger: CCAGAAGGCCAGGAAGCCCCAGATAGGGACGAGGTA...TTTAAGAGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTGTATTTACCTCTGTCTaGGAAAGACACCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAMQYALDRAPELRTSVFTSV*ERHLGD Trigger: ATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATAC...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTGGCCTCAGTCTTCTTTAGGTaGCTGCTCATCATACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRAPELRTSYNNSVLLASVFFR*LLIIHR Trigger: CCTGTGTATGATGAGCAGTCACCTAAAGAAGACTGA...GGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGAGGACTGGGGGTGAACTaGAACCTTGATGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRASPLKEFGREWSLQFRGLGVN*NLDGNL Trigger: CAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCC...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTCTCCTCTTCATCTTTaGCCTCAAAGTGTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLSPLHL*PQSVLP Trigger: AGGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGA...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCATGGGGAATGTTCCTCTaGTGGTTCTGTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKGHHHLRNLAENGLYSSWGMFL*WFCLLF Trigger: GAAGAGGAGACAGAACCATCAGAGGAACATTCCCCA...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTTCTCTTTCAGCAGCTTaGCAACAGAATTATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ITRTDPCSILSVLYPSTLSLSAA*QQNYTT Trigger: AGTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGA...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | GCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATCACACCCACCGTCCAGCATTTaGCATTTTCCTCCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPLKEFGREWSLQFRSHPPSSI*HFPPPF Trigger: GAAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGG...GTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTGCCATAGATGTTAGATaGCACACATGTGTATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: ITRTDPCSILSVLYPSTLAIDVR*HTCVFT Trigger: GGTAAATACACATGTGTGGCATCTAACATCTATGGC...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CTGAATGCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTTGACTCTTAAACAGTCCTCGTTCTGGTaGCTCTACAGGAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNALRTGQAGKRFYLTLKQSSFW*LYRRRL Trigger: GAGACGTCTCCTGTAGAGGCACCAGAACGAGGACTG...TTTAAGAGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| 3UTR CAA 72 bp | GCTATACCTTCAGGAAATCACCAGACATCTCTGTCTTaGGCAGGAAATCTCCCAGGGAAAGAACCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIPSGNHQTSLS*AGNLPGKEPVF Trigger: GAAGACAGGTTCTTTCCCTGGGAGATTTCCTGCCAAAGACAGAGATGTCTGGTGATTTCCTGAAGGTATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| 3UTR CAA 72 bp | ACGGAGCTGACAATATCTTATGGATCCTGCAAGGCCTaGTGGGAAGGTGATGTGCTATACCTTCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TELTISYGSCKA*WEGDVLYLQEI Trigger: GATTTCCTGAAGGTATAGCACATCACCTTCCCACAAGGCCTTGCAGGATCCATAAGATATTGTCAGCTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTAGGTTATTTTCCTCATCTTGCAATGCCCAACAAGTCAAGTATTCAGTCGGTCAGTTCTGGCAATaGTTACGGGCACAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRLFSSSCNAQQVKYSVGQFWQ*LRAQSP Trigger: TGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACC...GACTGAATACTTGACTTGTTGGGCATTGCAAGATGAGGAAAATAACCTAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTGGCCGTATTTACCTCTGTCTaGGAAAGACACCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDRAPELRTSYNNSVLLAVFTSV*ERHLGD Trigger: ATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATAC...GGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGGCCATAGATGTTAGATaGCACACATGTGTATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRDERLLVRLSGKCILHLAIDVR*HTCVFT Trigger: GGTAAATACACATGTGTGGCATCTAACATCTATGGC...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTTTGACTATGATATaGTCAGTTCTGGCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: DHTDRPLLHLISSVPQHSSLTMI*SVLAMI Trigger: AATCATTGCCAGAACTGACCATATCATAGTCAAAGA...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTCTTTGACTATGATATaGTCAGTTCTGGCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: RSHGQTPAPSYQFCTPALSLTMI*SVLAMI Trigger: AATCATTGCCAGAACTGACCATATCATAGTCAAAGA...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGAGGCTTCCTGGCCTTCTaGGGTATGCCTCACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRASPLKEFGREWSLQFRGFLAF*GMPHKI Trigger: AATTTTGTGAGGCATACCCCAGAAGGCCAGGAAGCC...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCATCAGTCTTCTTTAGGTaGCTGCTCATCATACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKGHHHLRNLAENGLYSSSVFFR*LLIIHR Trigger: CCTGTGTATGATGAGCAGTCACCTAAAGAAGACTGA...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTAGGTTATTTTCCTCATCTTGCAATGCCCAACAAGTCAAGTATTCAGTCACAAAATTCTGCCCCTaGTCCTCCAGCCCGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLFSSSCNAQQVKYSVTKFCP*SSSPTT Trigger: AGTAGTCGGGCTGGAGGAGCAGGGGCAGAATTTTGT...GACTGAATACTTGACTTGTTGGGCATTGCAAGATGAGGAAAATAACCTAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR CCA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATCAGTGAGTTGGGGATaGTGTATACCTCGTCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVLLAKRASPLKEFGRESVSWG*CIPRPY Trigger: ATAGGGACGAGGTATACACCATCCCCAACTCACTGA...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| 3UTR CAA 72 bp | CCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTaGGCCAAAAGGGCATCACCACTTAAGGAATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PELRTSYNNSVL*AKRASPLKEFG Trigger: GCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTCTCTTTCAGCAGCTTaGCAACAGAATTATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLSLSAA*QQNYTT Trigger: AGTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGA...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCGCCATAGATGTTAGATaGCACACATGTGTATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: YSWPKGHHHLRNLAENGLAIDVR*HTCVFT Trigger: GGTAAATACACATGTGTGGCATCTAACATCTATGGC...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAAATCTCAAAAGCCTTCTaGAGCTTCTCTGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSVLLAKRASPLKEFGREISKAF*SFSAPS Trigger: AGAAGGTGCAGAGAAGCTGCAGAAGGCTTTTGAGAT...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| 3UTR CAA 72 bp | GCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTaGACTCTTAAAGTGCTATCTGGGGGCAAAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALRTGQAGKRFY*TLKVLSGGKVF Trigger: AAAAACTTTGCCCCCAGATAGCACTTTAAGAGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CAA 72 bp | GGCAGGAAATCTCCCAGGGAAAGAACCTGTCTTCGTTaGGTCTTACACTTACATGTAAACCATTTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKSPRERTCLR*VLHLHVNHFHE Trigger: CTCATGAAAATGGTTTACATGTAAGTGTAAGACCAAACGAAGACAGGTTCTTTCCCTGGGAGATTTCCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| 3UTR CAA 72 bp | GAATGTTACACTTTTAAAACTGCCCAAATGAGTCTGTaGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ECYTFKTAQMSL*HVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACGTGCAACAGACTCATTTGGGCAGTTTTAAAAGTGTAACATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| 3UTR CAA 72 bp | ATAATCCTAAATCAGTATCTGTATGGAATGGGTACCTaGCCCTGCAGTTTCCATGAGGAATTCTACACATGG | + |
|
Preference number: 4 (lower is better) Translates to: IILNQYLYGMGT*PCSFHEEFYTW Trigger: CCATGTGTAGAATTCCTCATGGAAACTGCAGGGCAAGGTACCCATTCCATACAGATACTGATTTAGGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACATTCTTTGGCCATACATCTTATTTCATAGTAAATTGGCCTCCTTTTGGGGAATGTTCCTCTaGTGGTTCTGTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGNILWPYILFHSKLASFWGMFL*WFCLLF Trigger: GAAGAGGAGACAGAACCATCAGAGGAACATTCCCCA...AAAGGAGGCCAATTTACTATGAAATAAGATGTATGGCCAAAGAATGTTTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATCTTTGACTATGATATaGTCAGTTCTGGCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: KRASPLKEFGREWSLQFRSLTMI*SVLAMI Trigger: AATCATTGCCAGAACTGACCATATCATAGTCAAAGA...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS CCA 90 bp | AAGCATCCGAGTCAGCGGTGGGGGACTCACTTCGCTTCAGTGAGTTaGGGATGGTGTATACCTCGTCCCTATCTGGGGCTTCCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KHPSQRWGTHFASVS*GWCIPRPYLGLPGL Trigger: AAGGCCAGGAAGCCCCAGATAGGGACGAGGTATACACCATCCCCAACTCACTGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGCACAGGCGGGTGATGTaGAGGATCATGACTATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSRGHHSYLRDERLLHRRVM*RIMTMV Trigger: CACCATAGTCATGATCCTCAACATCACCCGCCTGTG...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS CCA 90 bp | TCTGCTGAGGCTGCTCATGCAATGACGAAGCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCAGTGAGTTGGGGATGGTGTATACCT | + |
|
Preference number: 5 (lower is better) Translates to: SAEAAHAMTKHPSQR*GTHFASVSWGWCIP Trigger: AGGTATACACCATCCCCAACTCACTGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATGCTTCGTCATTGCATGAGCAGCCTCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCACTGCTGGCTCGGTaGTTTCTAGGTGTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DHTDRPLLHLISSVPQHSSLLAR*FLGVLV Trigger: CACCAGCACACCTAGAAACAACCGAGCCAGCAGTGA...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGCCATTTAAAGTGCTGTaGGTCACACTCTTAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSRGHHSYLRDERLLPFKVL*VTLLAV Trigger: CACTGCTAAGAGTGTGACCAACAGCACTTTAAATGG...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCGCCACCGTCCAGCATTaGCCATTTTCCTCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SHGQTPAPSYQFCTPALFATVQH*PFSSSF Trigger: AAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGGC...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCCACAGGCGGGTGATGTaGAGGATCATGACTATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHGQTPAPSYQFCTPALFHRRVM*RIMTMV Trigger: CACCATAGTCATGATCCTCAACATCACCCGCCTGTG...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | AGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCCTTCGCTTCAGTGAGTaGGGGATGGTGTATACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSHGQTPAPSYQFCTPALLRFSE*GMVYTS Trigger: CGAGGTATACACCATCCCCAACTCACTGAAGCGAAG...GAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGTCTCCTCTTCATCTTaGACCTCAAAGTGTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSMQASSLSRGHHSYLRDVSSSS*TSKCPP Trigger: GGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGAC...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS TCA 90 bp | GGTCATCCACATGATCCCTTTTGGACTGGGGGTGAACTGAAACCTTaGTGGCAATCTGCTGAGGCTGCTCATGCAATGACGAAGCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: GHPHDPFWTGGELKP*WQSAEAAHAMTKHP Trigger: CGGATGCTTCGTCATTGCATGAGCAGCCTCAGCAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCCAAAAGGGATCATGTGGATGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | GCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGAGCGTCTCCTGATCTCTTTCAGCAGCTaGCCAACAGAATTATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSRGHHSYLRDERLLISFSS*PTELYH Trigger: GTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGAT...CAGGAGACGCTCATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DHTDRPLLHLISSVPQHSSEKDT*VMFRRP Trigger: TGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGA...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCTCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHGQTPAPSYQFCTPALFSEKDT*VMFRRP Trigger: TGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGA...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | ATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCACAGGCGGGTGATGTaGAGGATCATGACTATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITRTDPCSILSVLYPSTLHRRVM*RIMTMV Trigger: CACCATAGTCATGATCCTCAACATCACCCGCCTGTG...AAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCATGCAGGCGTCTTCCCTCTCGAGGGGGCATCACTCTTACCTAAGGGATGCAAGTTCTAGAGTTTaGGCTGAGGTTATGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSMQASSLSRGHHSYLRDASSRV*AEVMMG Trigger: CCCCATCATAACCTCAGCCAAAACTCTAGAACTTGC...ATCCCTTAGGTAAGAGTGATGCCCCCTCGAGAGGGAAGACGCCTGCATGGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTCACTGCTGGCTCGGTaGTTTCTAGGTGTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGKAMQYALDRAPELRTSSLLAR*FLGVLV Trigger: CACCAGCACACCTAGAAACAACCGAGCCAGCAGTGA...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGCACAGGCGGGTGATGTaGAGGATCATGACTATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRDERLLVRLSGKCILHLHRRVM*RIMTMV Trigger: CACCATAGTCATGATCCTCAACATCACCCGCCTGTG...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | CAGATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTGCAAGTTCTAGAGTTTaGGCTGAGGTTATGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QITRTDPCSILSVLYPSTASSRV*AEVMMG Trigger: CCCCATCATAACCTCAGCCAAAACTCTAGAACTTGC...AGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGATGAGCGTCTCCTGGTAAGGCTTAGCGGCAAGTGCATACTACATTTGCTTCGCTTCAGTGAGTaGGGGATGGTGTATACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRDERLLVRLSGKCILHLLRFSE*GMVYTS Trigger: CGAGGTATACACCATCCCCAACTCACTGAAGCGAAG...CAAATGTAGTATGCACTTGCCGCTAAGCCTTACCAGGAGACGCTCATCCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | TCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTTCCCATTTAAAGTGCTGTaGGTCACACTCTTAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHGQTPAPSYQFCTPALFPFKVL*VTLLAV Trigger: CACTGCTAAGAGTGTGACCAACAGCACTTTAAATGG...GAAGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | GATCACACGGACAGACCCCTGCTCCATCTTATCAGTTCTGTACCCCAGCACTCTCCATTTAAAGTGCTGTaGGTCACACTCTTAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DHTDRPLLHLISSVPQHSPFKVL*VTLLAV Trigger: CACTGCTAAGAGTGTGACCAACAGCACTTTAAATGG...AGAGTGCTGGGGTACAGAACTGATAAGATGGAGCAGGGGTCTGTCCGTGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACGCCACCGTCCAGCATTaGCCATTTTCCTCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KAMQYALDRAPELRTSYNATVQH*PFSSSF Trigger: AAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGGC...GTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | CTAGACAGGGCTCCTGAACTCAGAACGTCTTACAACAATAGTGTACTCTTGGCCCTTCGCTTCAGTGAGTaGGGGATGGTGTATACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LDRAPELRTSYNNSVLLALRFSE*GMVYTS Trigger: CGAGGTATACACCATCCCCAACTCACTGAAGCGAAG...GGCCAAGAGTACACTATTGTTGTAAGACGTTCTGAGTTCAGGAGCCCTGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAAAGCAATGCAGTACGCACTAGACAGGGCTCCTGAACTCAGAACGTCTGTCTCCTCTTCATCTTaGACCTCAAAGTGTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGKAMQYALDRAPELRTSVSSSS*TSKCPP Trigger: GGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGAC...AGACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS TCA 90 bp | ATGCCACACATGTGTATTTACCTCTGTCTGAGAAAGACACCTTGGTaGTGTTCAGGAGGCCACCGTCCAGCATTTGCCATTTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: MPHMCIYLCLRKTPW*CSGGHRPAFAIFLL Trigger: GAGGAGGAAAATGGCAAATGCTGGACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATACACATGTGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS TCA 90 bp | CGTTATGTCTGTAGAAGGCTCTGCAGTCTCTGGGGAATGTTCCTCTaGTGGTTCTGTCTCCTCTTCATCTTTGACCTCAAAGTGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RYVCRRLCSLWGMFL*WFCLLFIFDLKVSS Trigger: GGAGGACACTTTGAGGTCAAAGATGAAGAGGAGACAGAACCATCAGAGGAACATTCCCCAGAGACTGCAGAGCCTTCTACAGACATAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CCACAGCTGAATGCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTTGACTCTTCGCTTCAGTGAGTaGGGGATGGTGTATACCTCG | + |
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Preference number: 5 (lower is better) Translates to: PQLNALRTGQAGKRFYLTLRFSE*GMVYTS Trigger: CGAGGTATACACCATCCCCAACTCACTGAAGCGAAG...AGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAGCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| CDS TCA 90 bp | AGTGCCATAGATGTTAGATGCCACACATGTGTATTTACCTCTGTCTaGGAAAGACACCTTGGTGATGTTCAGGAGGCCACCGTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SAIDVRCHTCVFTSV*ERHLGDVQEATVQH Trigger: ATGCTGGACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATACACATGTGTGGCATCTAACATCTATGGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGCCACCGTCCAGCATTaGCCATTTTCCTCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: PKGHHHLRNLAENGLYSSATVQH*PFSSSF Trigger: AAAGGAGGAGGAAAATGGCAAATGCTGGACGGTGGC...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | TACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCGTCTCCTCTTCATCTTaGACCTCAAAGTGTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: YSWPKGHHHLRNLAENGLVSSSS*TSKCPP Trigger: GGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGAC...GAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCATCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PKGHHHLRNLAENGLYSSSEKDT*VMFRRP Trigger: TGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGA...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CCACAGCTGAATGCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTTGACTGCAAGTTCTAGAGTTTaGGCTGAGGTTATGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: PQLNALRTGQAGKRFYLTASSRV*AEVMMG Trigger: CCCCATCATAACCTCAGCCAAAACTCTAGAACTTGC...AGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAGCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160719.8 ENSMUST00000161421.2 |
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| CDS-3UTR CAA 90 bp | CCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGCACTGCTCCCCTCTTaGACTATGATATGGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PKGHHHLRNLAENGLYSSALLPS*TMIWSV Trigger: AACTGACCATATCATAGTCAAAGAGGGGAGCAGTGC...TGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | AATAGTGTACTCTTGGCCAAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAAGTCTCCTCTTCATCTTaGACCTCAAAGTGTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: NSVLLAKRASPLKEFGREVSSSS*TSKCPP Trigger: GGGAGGACACTTTGAGGTCAAAGATGAAGAGGAGAC...TTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTTGGCCAAGAGTACACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGAGGATGTGCTAAGTCATATGGAGGAAAGCAGTTGAATGTACTGAGATCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLRGCAKSYGGKQLNVLRSEKDT*VMFRRP Trigger: TGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGA...TCTCAGTACATTCAACTGCTTTCCTCCATATGACTTAGCACATCCTCTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGAGCAAGTTCTAGAGTTTaGGCTGAGGTTATGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: KRASPLKEFGREWSLQFRASSRV*AEVMMG Trigger: CCCCATCATAACCTCAGCCAAAACTCTAGAACTTGC...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | CTGAATGCTCTCAGAACTGGGCAGGCAGGTAAACGTTTTTATTTGACTCTTAAAGCACTGCTCCCCTCTTaGACTATGATATGGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LNALRTGQAGKRFYLTLKALLPS*TMIWSV Trigger: AACTGACCATATCATAGTCAAAGAGGGGAGCAGTGC...TTTAAGAGTCAAATAAAAACGTTTACCTGCCTGCCCAGTTCTGAGAGCATTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160719.8 |
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| CDS-3UTR CAA 90 bp | GCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGATCACACATCTCTTTCAGCAGCTaGCCAACAGAATTATACCAC | + |
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Preference number: 5 (lower is better) Translates to: ASPLKEFGREWSLQFRSHISFSS*PTELYH Trigger: GTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGAT...GTGTGATCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGGCATCACCACTTAAGGAATTTGGCAGAGAATGGTCTCTACAGTTCAGAATCTCTTTCAGCAGCTaGCCAACAGAATTATACCAC | + |
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Preference number: 5 (lower is better) Translates to: KRASPLKEFGREWSLQFRISFSS*PTELYH Trigger: GTGGTATAATTCTGTTGGCAAGCTGCTGAAAGAGAT...TCTGAACTGTAGAGACCATTCTCTGCCAAATTCCTTAAGTGGTGATGCCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS CCA 72 bp | GCTGCTCATGCAATGACGAAGCATCCGAGTCAGCGGTaGGGGACTCACTTCGCTTCAGTGAGTTGGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: AAHAMTKHPSQR*GTHFASVSWGW Trigger: CCATCCCCAACTCACTGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGATGCTTCGTCATTGCATGAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS TCA 72 bp | ATCCGAGTCAGCGGTGGGGGACTCACTTCGCTTCAGTaGGTTGGGGATGGTGTATACCTCGTCCCTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: IRVSGGGLTSLQ*VGDGVYLVPIW Trigger: CCAGATAGGGACGAGGTATACACCATCCCCAACTCACTGAAGCGAAGTGAGTCCCCCACCGCTGACTCGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS GCA 72 bp | GCTTCCTGGCCTTCTGGGGTATGCCTCACAAAATTCTaGCCCTGCTCCTCCAGCCCGACTACTTCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: ASWPSGVCLTKF*PCSSSPTTSMI Trigger: GATCATGGAAGTAGTCGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACCCCAGAAGGCCAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS CCA 72 bp | AGTCAGCGGTGGGGGACTCACTTCGCTTCAGTGAGTTaGGGATGGTGTATACCTCGTCCCTATCTGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SQRWGTHFASVS*GWCIPRPYLGL Trigger: AAGCCCCAGATAGGGACGAGGTATACACCATCCCCAACTCACTGAAGCGAAGTGAGTCCCCCACCGCTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS CAA 72 bp | TGCAGGTGTTTCTGTCACATGTCACTGCTGGCTCGGTaGTTTCTAGGTGTGCTGGTGGCAGTCCTCGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CRCFCHMSLLAR*FLGVLVAVLVL Trigger: CAGAACGAGGACTGCCACCAGCACACCTAGAAACAACCGAGCCAGCAGTGACATGTGACAGAAACACCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS TCA 72 bp | GTCATCCACATGATCCCTTTTGGACTGGGGGTGAACTaGAACCTTGATGGCAATCTGCTGAGGCTGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: VIHMIPFGLGVN*NLDGNLLRLLM Trigger: CATGAGCAGCCTCAGCAGATTGCCATCAAGGTTTCAGTTCACCCCCAGTCCAAAAGGGATCATGTGGATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161421.2 ENSMUST00000161702.8 |
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| CDS CAA 72 bp | ACACATGTGTATTTACCTCTGTCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCACCGTCCAGCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: THVYLPLSEKDT*VMFRRPPSSIC Trigger: GCAAATGCTGGACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATACACATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS CAA 90 bp | TTAGATGCCACACATGTGTATTTACCTCTGTCTGAGAAAGACACCTaGGTGATGTTCAGGAGGCCACCGTCCAGCATTTGCCATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LDATHVYLPLSEKDT*VMFRRPPSSICHFP Trigger: AGGAAAATGGCAAATGCTGGACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATACACATGTGTGGCATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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| CDS TCA 72 bp | ATGTGTATTTACCTCTGTCTGAGAAAGACACCTTGGTaGTGTTCAGGAGGCCACCGTCCAGCATTTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: MCIYLCLRKTPW*CSGGHRPAFAI Trigger: AATGGCAAATGCTGGACGGTGGCCTCCTGAACATCACCAAGGTGTCTTTCTCAGACAGAGGTAAATACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034066.4 ENSMUST00000160719.8 ENSMUST00000161702.8 |
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