Pregenerated sensors for MFAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020522Ensembl transcript IDs: ENSMUST00000020830.14, ENSMUST00000108848.2, ENSMUST00000108849.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCACTCTCAGCCAGCAGGAAGGGCTGGCCAGCTTCAGTGCTCACTaGACCCGGATGAGGTGGGCAGCACCACCCCTTATCATTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VTLSQQEGLASFSAH*TRMRWAAPPLIISP Trigger: GGGGGAAATGATAAGGGGTGGTGCTGCCCACCTCATCCGGGTGCAGTGAGCACTGAAGCTGGCCAGCCCTTCCTGCTGGCTGAGAGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR GCA 90 bp | CTGTCACGTCACTCTCAGCCAGCAGGAAGGGCTGGCCAGCTTCAGTaGTCACTGCACCCGGATGAGGTGGGCAGCACCACCCCTTATCAT | + |
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Preference number: 1 (lower is better) Translates to: LSRHSQPAGRAGQLQ*SLHPDEVGSTTPYH Trigger: ATGATAAGGGGTGGTGCTGCCCACCTCATCCGGGTGCAGTGAGCACTGAAGCTGGCCAGCCCTTCCTGCTGGCTGAGAGTGACGTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | AAGAGGCGAATCACCGTTAGCACCAGGTTGAGGGACATGGGGCACTaGAGCGGATTCTGCAGTTCGAGACCTACACAGAGCCCACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KRRITVSTRLRDMGH*SGFCSSRPTQSPPG Trigger: CCCAGGTGGGCTCTGTGTAGGTCTCGAACTGCAGAATCCGCTTCAGTGCCCCATGTCCCTCAACCTGGTGCTAACGGTGATTCGCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR GCA 90 bp | CAGACTGGCTTAGCACTTGCAATCCTTCTGCCTCTGCCTCCCAGGTaGTGGGATTACAGCTGTGTTCCACCACGTCGAGTGTCTGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: QTGLALAILLPLPPR*WDYSCVPPRRVSVL Trigger: TAAAACAGACACTCGACGTGGTGGAACACAGCTGTAATCCCAGCACCTGGGAGGCAGAGGCAGAAGGATTGCAAGTGCTAAGCCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR CCA 90 bp | TGCACCAGCACATGCTCACTCCCCAGGGCAGAGTATCTCCATGTCTaGCACTGGTGTAGACAATTAGAGTGCAGAATAAGGTCTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: CTSTCSLPRAEYLHV*HWCRQLECRIRSQR Trigger: CCTTTGAGACCTTATTCTGCACTCTAATTGTCTACACCAGTGCCAGACATGGAGATACTCTGCCCTGGGGAGTGAGCATGTGCTGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR CCA 90 bp | CTGAAGAGGAAGTGGCTCGCAGATGGGGATCTGACCTTTAGCATATaGAAGAGAGGCAAAGTAGCAGTGGGGGCTTTCTCACAATTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LKRKWLADGDLTFSI*KRGKVAVGAFSQLS Trigger: GGACAATTGTGAGAAAGCCCCCACTGCTACTTTGCCTCTCTTCCATATGCTAAAGGTCAGATCCCCATCTGCGAGCCACTTCCTCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR CCA 90 bp | AGCACATGCTCACTCCCCAGGGCAGAGTATCTCCATGTCTGGCACTaGTGTAGACAATTAGAGTGCAGAATAAGGTCTCAAAGGATGGAC | + |
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Preference number: 1 (lower is better) Translates to: STCSLPRAEYLHVWH*CRQLECRIRSQRMD Trigger: GTCCATCCTTTGAGACCTTATTCTGCACTCTAATTGTCTACACCAGTGCCAGACATGGAGATACTCTGCCCTGGGGAGTGAGCATGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | CTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCACGAGGCTaGGTGTTGTCACATTCTTGCCTAGATGAGAAGACTGTGGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLCDRAISTQRFSRG*VLSHSCLDEKTVVL Trigger: CAGAACCACAGTCTTCTCATCTAGGCAAGAATGTGACAACACTCAGCCTCGTGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | CTGTGTTCCACCACGTCGAGTGTCTGTTTTATTTTCTGTGATGACTaGCCTAGGCTACGGTGGAGTGGCCTATATAAATTCTATAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LCSTTSSVCFIFCDD*PRLRWSGLYKFYKL Trigger: AAGCTTATAGAATTTATATAGGCCACTCCACCGTAGCCTAGGTCAGTCATCACAGAAAATAAAACAGACACTCGACGTGGTGGAACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR GCA 90 bp | CATACACTTGTATCCTTAGCATTTGTGAGGCAGAAGCAAGAGGATTaGTCTAAGTTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: HTLVSLAFVRQKQED*SKFKASLGYILKQR Trigger: CCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAACTTAGAGCAATCCTCTTGCTTCTGCCTCACAAATGCTAAGGATACAAGTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | TTAAAGAAACTCACATCTCTGAGCCAAGGCAAGCTTTTGGTTGAATaGTTGGAAGCTTTTGTTTGGCCCTGGAAGTTTCCATGGAAACAG | + |
|
Preference number: 1 (lower is better) Translates to: LKKLTSLSQGKLLVE*LEAFVWPWKFPWKQ Trigger: CTGTTTCCATGGAAACTTCCAGGGCCAAACAAAAGCTTCCAATCATTCAACCAAAAGCTTGCCTTGGCTCAGAGATGTGAGTTTCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | TTCCTTAAAGAAACTCACATCTCTGAGCCAAGGCAAGCTTTTGGTTaGATGATTGGAAGCTTTTGTTTGGCCCTGGAAGTTTCCATGGAA | + |
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Preference number: 1 (lower is better) Translates to: FLKETHISEPRQAFG*MIGSFCLALEVSME Trigger: TTCCATGGAAACTTCCAGGGCCAAACAAAAGCTTCCAATCATTCAACCAAAAGCTTGCCTTGGCTCAGAGATGTGAGTTTCTTTAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR TCA 90 bp | GGTTTGATTAGACATAGAAAATATCAACAGCTGTCCTCTTCACTTTaGAAAGTAGTGTTTACAGGTCTGCCACTCCTCCTGAGTTTGACC | + |
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Preference number: 1 (lower is better) Translates to: GLIRHRKYQQLSSSL*KVVFTGLPLLLSLT Trigger: GGTCAAACTCAGGAGGAGTGGCAGACCTGTAAACACTACTTTTCAAAGTGAAGAGGACAGCTGTTGATATTTTCTATGTCTAATCAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR GCA 90 bp | CATCACTCCAGCAACCTTAAGGAAAATGACCAAATATCAGAAAAATaGTGCCCTTTCACAATGACTTTGGCAATTCATGCTGTGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: HHSSNLKENDQISEK*CPFTMTLAIHAVVC Trigger: ACACACCACAGCATGAATTGCCAAAGTCATTGTGAAAGGGCAGCATTTTTCTGATATTTGGTCATTTTCCTTAAGGTTGCTGGAGTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTGGCCCACGGGCTCCTaGGGTTGGGGAACTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAWPTGS*GWGTEE Trigger: CTCTTCAGTTCCCCAACCTCAGGAGCCCGTGGGCCA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAAGCAGGCTCTTTTCCTaGGCACTGGGCAAGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RERLQKSPHSKGCIRRPKSRLFS*ALGKLS Trigger: TGACAGCTTGCCCAGTGCTCAGGAAAAGAGCCTGCT...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCAAGCAGGCTCTTTTCCTaGGCACTGGGCAAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LFDTLHFPQDLRAQADLPSRLFS*ALGKLS Trigger: TGACAGCTTGCCCAGTGCTCAGGAAAAGAGCCTGCT...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTGGCTCTCCTGGATTTaGGCCTGGAACTCAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMWLSWI*AWNSGI Trigger: GATCCCTGAGTTCCAGGCGCAAATCCAGGAGAGCCA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTCAATCCTTCTGCCTCTaGCTCCCAGGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAQSFCL*LPGAGI Trigger: AATCCCAGCACCTGGGAGGCAGAGGCAGAAGGATTG...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGCACTTGCAATCCTTCTaGCTCTGCCTCCCAGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMHLQSF*LCLPGA Trigger: AGCACCTGGGAGGCAGAGGCAGAAGGATTGCAAGTG...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTCGCATGCAGGAAAACTaGCCCCTACCCTCAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMARMQEN*PLPSNR Trigger: CCTATTTGAGGGTAGGGGTCAGTTTTCCTGCATGCG...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGCAGGGCAGATGCATTaGCCACTGGTTAGGATACCA | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMAGQMH*PLVRIP Trigger: TGGTATCCTAACCAGTGGCCAATGCATCTGCCCTGC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGACAAAGGCAGGCACTaGGCTCACTGGTTACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMADKGRH*AHWLQF Trigger: AAACTGTAACCAGTGAGCTCAGTGCCTGCCTTTGTC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGGACAAAGGCAGGCACTaGGCTCACTGGTTACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGDKGRH*AHWLQF Trigger: AAACTGTAACCAGTGAGCTCAGTGCCTGCCTTTGTC...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCAATGGCACGAGCTTCCTaGAGTGGAGGAAACGATTGT | + |
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Preference number: 2 (lower is better) Translates to: LFDTLHFPQDLRAQADLPMARAS*SGGNDC Trigger: ACAATCGTTTCCTCCACTGCAGGAAGCTCGTGCCAT...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCATCTAGACAGCATGCATaGAGCCTCCTGGGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: NNTHSLLCDRAISTQRFSSRQHA*SLLGQS Trigger: TGACTGACCCAGGAGGCTGCATGCATGCTGTCTAGA...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAACTCCATGTCTGGCACTaGTGTAGACAATTAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RERLQKSPHSKGCIRRPKLHVWH*CRQLEC Trigger: GCACTCTAATTGTCTACACCAGTGCCAGACATGGAG...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCAGCAGGGCAGATGCATTaGCCACTGGTTAGGATACCA | + |
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Preference number: 2 (lower is better) Translates to: NNTHSLLCDRAISTQRFSAGQMH*PLVRIP Trigger: TGGTATCCTAACCAGTGGCCAATGCATCTGCCCTGC...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGAGAAGCCAAATGCAGTaGAGCATCACAATGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGRSQMQ*SITMSS Trigger: GGAGCTCATTGTGATGCTTCACTGCATTTGGCTTCT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTAGAAACTCACATCTCTaGGCCAAGGCAAGCTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMARNSHL*AKASFW Trigger: CCAAAAGCTTGCCTTGGCTCAGAGATGTGAGTTTCT...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGGAAATTCAGGAGACTaGCCCCCACAGAAGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAGNSGD*PPQKRF Trigger: AAATCTCTTCTGTGGGGGTCAGTCTCCTGAATTTCC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGAAGGACTGCAGATATaGGGGAAATTCAGGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMEGLQI*GKFRRL Trigger: CAGTCTCCTGAATTTCCCTCATATCTGCAGTCCTTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTCCAGAGAGGTGACTTaGCACAGTTCTTGTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMSREVT*HSSCSQ Trigger: TTGTGAACAAGAACTGTGTCAAGTCACCTCTCTGGA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAGAATTTCCAGAGAGGTaGCTTGACACAGTTCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RERLQKSPHSKGCIRRPKEFPER*LDTVLV Trigger: AACAAGAACTGTGTCAAGTCACCTCTCTGGAAATTC...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCAGAAGGACTGCAGATATaGGGGAAATTCAGGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: NNTHSLLCDRAISTQRFSEGLQI*GKFRRL Trigger: CAGTCTCCTGAATTTCCCTCATATCTGCAGTCCTTC...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGCAGACAGAAAGATATTaGCACCAGCTGGTAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMQTERY*HQLVTD Trigger: GTCTGTTACCAGCTGGTGTCAATATCTTTCTGTCTG...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCTGAGGTTGGGGAACTaGAGAGGAAGTGGCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRLRLGN*RGSGSQ Trigger: CTGCGAGCCACTTCCTCTTCAGTTCCCCAACCTCAG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGCCTCTGCCTCCCAGGTaGTGGGATTACAGCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVPLPPR*WDYSCV Trigger: AACACAGCTGTAATCCCAGCACCTGGGAGGCAGAGG...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTGGCAGTGTAGTGCATaGATGATTCTAGTATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAWQCSA*MILVSR Trigger: CCTGGATACTAGAATCATGCATGCACTACACTGCCA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTCAGAAGCAAGAGGATTaGTCTAAGTTCAAGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAQKQED*SKFKAS Trigger: GCTAGCCTTGAACTTAGAGCAATCCTCTTGCTTCTG...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGAATTACATTTTCCCCTaGGAACATCAAGGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGNYIFP*EHQGQP Trigger: AGGCTGGCCTTGATGTTCCCAGGGGAAAATGTAATT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGACGAGCTTCCTGCAGTaGAGGAAACGATTGTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGTSFLQ*RKRLLR Trigger: TCTTAACAATCGTTTCCTCCACTGCAGGAAGCTCGT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGAGGTTAAAAATCTATaGCACGAGCTTCCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMEVKNL*HELPAV Trigger: CACTGCAGGAAGCTCGTGCCATAGATTTTTAACCTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTTGGAAGCTTTTGTTTaGCCCTGGAAGTTTCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMLEAFV*PWKFPW Trigger: CCATGGAAACTTCCAGGGCCAAACAAAAGCTTCCAA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGCTGCCTCCCAGGTGCTaGGATTACAGCTGTGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVLPPRC*DYSCVP Trigger: TGGAACACAGCTGTAATCCCAGCACCTGGGAGGCAG...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGTAAGAAGTTTTGGTTaGAGTCCCAACTCAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMVRSFG*SPNSRR Trigger: TCTCCTTGAGTTGGGACTTCAACCAAAACTTCTTAC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCAGAATTTCCAGAGAGGTaGCTTGACACAGTTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LFDTLHFPQDLRAQADLPEFPER*LDTVLV Trigger: AACAAGAACTGTGTCAAGTCACCTCTCTGGAAATTC...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACCGTTAGCACCAGGTTaGGGGACATGGGGCACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITILSICHLIKVHTDSFTPLAPG*GTWGTE Trigger: TTCAGTGCCCCATGTCCCTCAACCTGGTGCTAACGG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGCGCATGCAGGAAAACTaGCCCCTACCCTCAAATAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVRMQEN*PLPSNR Trigger: CCTATTTGAGGGTAGGGGTCAGTTTTCCTGCATGCG...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAGACTTTGGCAATTCATaGTGTGGTGTGTTTAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RERLQKSPHSKGCIRRPKDFGNS*CGVFKV Trigger: AACCTTAAACACACCACAGCATGAATTGCCAAAGTC...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGTGGCTCTCCTGGATTTaGGCCTGGAACTCAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRWLSWI*AWNSGI Trigger: GATCCCTGAGTTCCAGGCGCAAATCCAGGAGAGCCA...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGTATCAGGCGAAGGACTaGAGATATGAGGGAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGYQAKD*RYEGNS Trigger: TGAATTTCCCTCATATCTGCAGTCCTTCGCCTGATA...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCCTCTGCCTCCCAGGTaGTGGGATTACAGCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRPLPPR*WDYSCV Trigger: AACACAGCTGTAATCCCAGCACCTGGGAGGCAGAGG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCAATCCTTCTGCCTCTaGCTCCCAGGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRQSFCL*LPGAGI Trigger: AATCCCAGCACCTGGGAGGCAGAGGCAGAAGGATTG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAGTAGGTAAGAAGTTTTaGTTGAAGTCCCAACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RERLQKSPHSKGCIRRPKVGKKF*LKSQLK Trigger: CTTGAGTTGGGACTTCAACCAAAACTTCTTACCTAC...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGATGCATGCAGCCTCCTaGGTCAGTCAGGAATCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRMHAAS*VSQESS Trigger: GCTGGATTCCTGACTGACCCAGGAGGCTGCATGCAT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 90 bp | TTATATCAATGTGTAGTGGACAGGAAACAGACAAGCTCACTGGGCTaGACTCAAGAAGTAAGCCTAAAAGGCAGGCATAGTGACATACAC | + |
|
Preference number: 2 (lower is better) Translates to: LYQCVVDRKQTSSLG*TQEVSLKGRHSDIH Trigger: GTGTATGTCACTATGCCTGCCTTTTAGGCTTACTTCTTGAGTCAAGCCCAGTGAGCTTGTCTGTTTCCTGTCCACTACACATTGATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTCAATATGTCTACCTTaGAGTTCAAGACAATGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMASICLP*SSRQCP Trigger: GGGACATTGTCTTGAACTTCAAGGTAGACATATTGA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTCTGTCCTCTTCACTTTaGAAAGTAGTGTTTACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMALSSSL*KVVFTG Trigger: ACCTGTAAACACTACTTTTCAAAGTGAAGAGGACAG...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGACTTTGGCAATTCATaGTGTGGTGTGTTTAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMDFGNS*CGVFKV Trigger: AACCTTAAACACACCACAGCATGAATTGCCAAAGTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGATGGCACGAGCTTCCTaGAGTGGAGGAAACGATTGT | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVMARAS*SGGNDC Trigger: ACAATCGTTTCCTCCACTGCAGGAAGCTCGTGCCAT...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGGTAGGTAAGAAGTTTTaGTTGAAGTCCCAACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGVGKKF*LKSQLK Trigger: CTTGAGTTGGGACTTCAACCAAAACTTCTTACCTAC...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCAGCCAAGGCAAGCTTTTaGTTGAATGATTGGAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NNTHSLLCDRAISTQRFSAKASF*LNDWKL Trigger: AAGCTTCCAATCATTCAACCAAAAGCTTGCCTTGGC...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGGGAAATTCAGGAGACTaGCCCCCACAGAAGAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVGNSGD*PPQKRF Trigger: AAATCTCTTCTGTGGGGGTCAGTCTCCTGAATTTCC...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTGTAGACAATTAGAGTaGAGAATAAGGTCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMACRQLE*RIRSQR Trigger: CCTTTGAGACCTTATTCTGCACTCTAATTGTCTACA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTTTTGGTTGAATGATTaGAAGCTTTTGTTTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FKASLGYILKQRQMKASMFWLND*KLLFGP Trigger: AGGGCCAAACAAAAGCTTCCAATCATTCAACCAAAA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGATGAAGATGCTGAAATaGCAGCTTTTGGTAGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGMKMLK*QLLVDL Trigger: TAGATCTACCAAAAGCTGCCATTTCAGCATCTTCAT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTATGAAGATGCTGAAATaGCAGCTTTTGGTAGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAMKMLK*QLLVDL Trigger: TAGATCTACCAAAAGCTGCCATTTCAGCATCTTCAT...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGAGAAGCCAAATGCAGTaGAGCATCACAATGAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRRSQMQ*SITMSS Trigger: GGAGCTCATTGTGATGCTTCACTGCATTTGGCTTCT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCAATATCAGAAAAATGCTaGCCTTTCACAATGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LFDTLHFPQDLRAQADLPISEKC*PFTMTL Trigger: CAAAGTCATTGTGAAAGGGCAGCATTTTTCTGATAT...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGCAAATATCAGAAAAATaGTGCCCTTTCACAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGQISEK*CPFTMT Trigger: AGTCATTGTGAAAGGGCAGCATTTTTCTGATATTTG...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGAATTACATTTTCCCCTaGGAACATCAAGGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRNYIFP*EHQGQP Trigger: AGGCTGGCCTTGATGTTCCCAGGGGAAAATGTAATT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGACGAGCTTCCTGCAGTaGAGGAAACGATTGTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRTSFLQ*RKRLLR Trigger: TCTTAACAATCGTTTCCTCCACTGCAGGAAGCTCGT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGGAGGTTAAAAATCTATaGCACGAGCTTCCTGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDREVKNL*HELPAV Trigger: CACTGCAGGAAGCTCGTGCCATAGATTTTTAACCTC...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGGCCAAGGCAAGCTTTTaGTTGAATGATTGGAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVAKASF*LNDWKL Trigger: AAGCTTCCAATCATTCAACCAAAAGCTTGCCTTGGC...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGTATTTTAACAGAACTTaGAAGGCTCAGAGCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVYFNRT*KAQSRA Trigger: TGCCCTGCTCTGAGCCTTCCAAGTTCTGTTAAAATA...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAGAAAAGGCAGTATTACCATATTATCCATATGCCACTTGATAAAAGTGCACGCCAAAGAAAAACTGTaGCCAGAGAAGTCTTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: DRKGSITILSICHLIKVHAKEKL*PEKSYS Trigger: TGAGTAAGACTTCTCTGGTCACAGTTTTTCTTTGGC...GTGCACTTTTATCAAGTGGCATATGGATAATATGGTAATACTGCCTTTTCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACATCCAGAGAGGTGACTTaGCACAGTTCTTGTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: ITILSICHLIKVHTDSFTSREVT*HSSCSQ Trigger: TTGTGAACAAGAACTGTGTCAAGTCACCTCTCTGGA...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACAGTAAGAAGTTTTGGTTaGAGTCCCAACTCAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ITILSICHLIKVHTDSFTVRSFG*SPNSRR Trigger: TCTCCTTGAGTTGGGACTTCAACCAAAACTTCTTAC...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACATGTCCTCTGTTTGTTTaGCACTTTACATTTCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ITILSICHLIKVHTDSFTCPLFV*HFTFPS Trigger: TGAGGGAAATGTAAAGTGTCAAACAAACAGAGGACA...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGTGTAGACAATTAGAGTaGAGAATAAGGTCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRCRQLE*RIRSQR Trigger: CCTTTGAGACCTTATTCTGCACTCTAATTGTCTACA...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGATATCAGAAAAATGCTaGCCTTTCACAATGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRISEKC*PFTMTL Trigger: CAAAGTCATTGTGAAAGGGCAGCATTTTTCTGATAT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR GCA 72 bp | CACTCTCAGCCAGCAGGAAGGGCTGGCCAGCTTCAGTaGTCACTGCACCCGGATGAGGTGGGCAGCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: HSQPAGRAGQLQ*SLHPDEVGSTT Trigger: GGTGGTGCTGCCCACCTCATCCGGGTGCAGTGAGCACTGAAGCTGGCCAGCCCTTCCTGCTGGCTGAGAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR GCA 72 bp | AGCCAGCAGGAAGGGCTGGCCAGCTTCAGTGCTCACTaGACCCGGATGAGGTGGGCAGCACCACCCCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SQQEGLASFSAH*TRMRWAAPPLI Trigger: GATAAGGGGTGGTGCTGCCCACCTCATCCGGGTGCAGTGAGCACTGAAGCTGGCCAGCCCTTCCTGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | CTGAGCGAGGCTCTAGACAGCATGCATGCAGCCTCCTaGGTCAGTCAGGAATCCAGCTTAGGCTGCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSEALDSMHAAS*VSQESSLGCCR Trigger: CCTACAGCAGCCTAAGCTGGATTCCTGACTGACCCAGGAGGCTGCATGCATGCTGTCTAGAGCCTCGCTCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | ATCACCGTTAGCACCAGGTTGAGGGACATGGGGCACTaGAGCGGATTCTGCAGTTCGAGACCTACACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ITVSTRLRDMGH*SGFCSSRPTQS Trigger: GCTCTGTGTAGGTCTCGAACTGCAGAATCCGCTTCAGTGCCCCATGTCCCTCAACCTGGTGCTAACGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | TTGGAAGGCTCAGAGCAGGGCAGATGCATTGGCCACTaGTTAGGATACCACTGGATCAAGTCCAGGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LEGSEQGRCIGH*LGYHWIKSRLS Trigger: GCTAAGCCTGGACTTGATCCAGTGGTATCCTAACCAGTGGCCAATGCATCTGCCCTGCTCTGAGCCTTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR GCA 72 bp | CTAAGTGGTGCCTCACTTAAAATCTGCACCAGCACATaGTCACTCCCCAGGGCAGAGTATCTCCATGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSGASLKICTST*SLPRAEYLHVW Trigger: CCAGACATGGAGATACTCTGCCCTGGGGAGTGAGCATGTGCTGGTGCAGATTTTAAGTGAGGCACCACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | ACAGAACTTGGAAGGCTCAGAGCAGGGCAGATGCATTaGCCACTGGTTAGGATACCACTGGATCAAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TELGRLRAGQMH*PLVRIPLDQVQ Trigger: CTGGACTTGATCCAGTGGTATCCTAACCAGTGGCCAATGCATCTGCCCTGCTCTGAGCCTTCCAAGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR GCA 72 bp | AGGATCTTGTTAGATATCTCAGACTGGCTTAGCACTTaGAATCCTTCTGCCTCTGCCTCCCAGGTGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RILLDISDWLST*NPSASASQVLG Trigger: TCCCAGCACCTGGGAGGCAGAGGCAGAAGGATTGCAAGTGCTAAGCCAGTCTGAGATATCTAACAAGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | AAGTGGCTCGCAGATGGGGATCTGACCTTTAGCATATaGAAGAGAGGCAAAGTAGCAGTGGGGGCTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KWLADGDLTFSI*KRGKVAVGAFS Trigger: TGAGAAAGCCCCCACTGCTACTTTGCCTCTCTTCCATATGCTAAAGGTCAGATCCCCATCTGCGAGCCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | CGGATTCTGCAGTTCGAGACCTACACAGAGCCCACCTaGGAATTTAGTACGTCTAAAAAGAGAGAGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RILQFETYTEPT*EFSTSKKREPE Trigger: CTCAGGCTCTCTCTTTTTAGACGTACTAAATTCCCAGGTGGGCTCTGTGTAGGTCTCGAACTGCAGAATCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGAAGTGACCCCAACCTaGCTTTATCAGGCGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FKASLGYILKQRQMKASMEVTPT*LYQAKD Trigger: GTCCTTCGCCTGATAAAGCAAGGTTGGGGTCACTTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGGGGCTTTCTCACAATaGTCCCAGAGTCAGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAGAFSQ*SQSQQF Trigger: GAACTGCTGACTCTGGGACAATTGTGAGAAAGCCCC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | GACAGGGCCATAAGCACCCAGAGATTTTCACGAGGCTaGGTGTTGTCACATTCTTGCCTAGATGAGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: DRAISTQRFSRG*VLSHSCLDEKT Trigger: AGTCTTCTCATCTAGGCAAGAATGTGACAACACTCAGCCTCGTGAAAATCTCTGGGTGCTTATGGCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | TCACTCCCCAGGGCAGAGTATCTCCATGTCTGGCACTaGTGTAGACAATTAGAGTGCAGAATAAGGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLPRAEYLHVWH*CRQLECRIRSQ Trigger: TTGAGACCTTATTCTGCACTCTAATTGTCTACACCAGTGCCAGACATGGAGATACTCTGCCCTGGGGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | CACAATGAGCTCCACGGCCATGAGGTTAAAAATCTATaGCACGAGCTTCCTGCAGTGGAGGAAACGATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HNELHGHEVKNL*HELPAVEETIV Trigger: AACAATCGTTTCCTCCACTGCAGGAAGCTCGTGCCATAGATTTTTAACCTCATGGCCGTGGAGCTCATTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAGGTAAGAAGTTTTGGTaGAAGTCCCAACTCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RERLQKSPHSKGCIRRPKGKKFW*KSQLKE Trigger: CTCCTTGAGTTGGGACTTCAACCAAAACTTCTTACC...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGCCACTCCTCCTGAGTTaGACCCTTCCCTATTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGPLLLS*TLPYFN Trigger: GTTAAAATAGGGAAGGGTCAAACTCAGGAGGAGTGG...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGCCTTTCACAATGACTTaGGCAATTCATGCTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKASLGYILKQRQMKASMPFTMT*AIHAVV Trigger: CACCACAGCATGAATTGCCAAAGTCATTGTGAAAGG...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGGTAAGAAGTTTTGGTaGAAGTCCCAACTCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAGKKFW*KSQLKE Trigger: CTCCTTGAGTTGGGACTTCAACCAAAACTTCTTACC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCACTCACTGGTTACAGTTaGAATCTCCTGCTGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NNTHSLLCDRAISTQRFSLTGYS*NLLLSS Trigger: AGAGGACAGCAGGAGATTCAAACTGTAACCAGTGAG...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTATATCAGACATGGCTTaGAGGACTGGGGTTACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAISDMA*RTGVTK Trigger: TTTGGTAACCCCAGTCCTCAAAGCCATGTCTGATAT...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCATTCCAGAGAGGTGACTaGACACAGTTCTTGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: NNTHSLLCDRAISTQRFSFQRGD*TQFLFT Trigger: TGTGAACAAGAACTGTGTCAAGTCACCTCTCTGGAA...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGAATGATTGGAAGCTTTaGTTTGGCCCTGGAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGNDWKL*FGPGSF Trigger: GAAACTTCCAGGGCCAAACAAAAGCTTCCAATCATT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | GAAACTCACATCTCTGAGCCAAGGCAAGCTTTTGGTTaGATGATTGGAAGCTTTTGTTTGGCCCTGGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ETHISEPRQAFG*MIGSFCLALEV Trigger: AACTTCCAGGGCCAAACAAAAGCTTCCAATCATTCAACCAAAAGCTTGCCTTGGCTCAGAGATGTGAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | ACCACGTCGAGTGTCTGTTTTATTTTCTGTGATGACTaGCCTAGGCTACGGTGGAGTGGCCTATATAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: TTSSVCFIFCDD*PRLRWSGLYKF Trigger: GAATTTATATAGGCCACTCCACCGTAGCCTAGGTCAGTCATCACAGAAAATAAAACAGACACTCGACGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | ACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTaGCAGGGCCATAAGCACCCAGAGATTTTCACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSTIKQHSFPFV*QGHKHPEIFTR Trigger: CCTCGTGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCACTGTCCTCTGTTTGTTaGACACTTTACATTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NNTHSLLCDRAISTQRFSLSSVC*TLYISL Trigger: GAGGGAAATGTAAAGTGTCAAACAAACAGAGGACAG...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGAAGGCAAGCTTTTGGTaGAATGATTGGAAGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGKASFW*NDWKLL Trigger: CAAAAGCTTCCAATCATTCAACCAAAAGCTTGCCTT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | CCCTACCCTCAAATAGGTGCCTATTGGTTAGCTTTTTaGGACAGGATCTTGTTAGATATCTCAGACTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PYPQIGAYWLAF*DRILLDISDWL Trigger: AAGCCAGTCTGAGATATCTAACAAGATCCTGTCTCAAAAAGCTAACCAATAGGCACCTATTTGAGGGTAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR GCA 72 bp | TATCTCCATGTCTGGCACTGGTGTAGACAATTAGAGTaGAGAATAAGGTCTCAAAGGATGGACCAAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: YLHVWHWCRQLE*RIRSQRMDQRS Trigger: AGATCTTTGGTCCATCCTTTGAGACCTTATTCTGCACTCTAATTGTCTACACCAGTGCCAGACATGGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGACTTGACACAGTTCTaGTTCACAAAACACCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LDEKTVVLEGGYIRVTMADLTQF*FTKHQL Trigger: TAATTGGTGTTTTGTGAACAAGAACTGTGTCAAGTC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGGACTTGACACAGTTCTaGTTCACAAAACACCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGDLTQF*FTKHQL Trigger: TAATTGGTGTTTTGTGAACAAGAACTGTGTCAAGTC...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCACAGTGGAGGAAACGATaGTTAAGACTATTTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: LFDTLHFPQDLRAQADLPQWRKR*LRLFTI Trigger: GATTGTAAATAGTCTTAACAATCGTTTCCTCCACTG...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR TCA 72 bp | AGACATAGAAAATATCAACAGCTGTCCTCTTCACTTTaGAAAGTAGTGTTTACAGGTCTGCCACTCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RHRKYQQLSSSL*KVVFTGLPLLL Trigger: CAGGAGGAGTGGCAGACCTGTAAACACTACTTTTCAAAGTGAAGAGGACAGCTGTTGATATTTTCTATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | AGGATGTACTCCCAAGAAGAATACATACACTTCTCATaGAGAGAGTGGTTTTCTTCTCCTCGTCCTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RMYSQEEYIHFS*REWFSSPRPLF Trigger: AAAAAGAGGACGAGGAGAAGAAAACCACTCTCTCCATGAGAAGTGTATGTATTCTTCTTGGGAGTACATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | AAACATTTAAGCCATATCAGACATGGCTTTGAGGACTaGGGTTACCAAACTGTTCTAAACACAACAGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KHLSHIRHGFED*GYQTVLNTTGH Trigger: ATGCCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGATATGGCTTAAATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCCACTCCTCCTGAGTTaGACCCTTCCCTATTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRPLLLS*TLPYFN Trigger: GTTAAAATAGGGAAGGGTCAAACTCAGGAGGAGTGG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGCTGTCCTCTGTTTGTTaGACACTTTACATTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVLSSVC*TLYISL Trigger: GAGGGAAATGTAAAGTGTCAAACAAACAGAGGACAG...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CCA 72 bp | GTGCATGTGTGGAAGGAGTATATGAAGATGCTGAAATaGCAGCTTTTGGTAGATCTATTTTATGAAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: VHVWKEYMKMLK*QLLVDLFYEAT Trigger: AGTGGCTTCATAAAATAGATCTACCAAAAGCTGCCATTTCAGCATCTTCATATACTCCTTCCACACATGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACATTCCAGAGAGGTGACTaGACACAGTTCTTGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ITILSICHLIKVHTDSFTFQRGD*TQFLFT Trigger: TGTGAACAAGAACTGTGTCAAGTCACCTCTCTGGAA...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGAAGGCAAGCTTTTGGTaGAATGATTGGAAGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRKASFW*NDWKLL Trigger: CAAAAGCTTCCAATCATTCAACCAAAAGCTTGCCTT...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACAGTGGAGGAAACGATaGTTAAGACTATTTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: ITILSICHLIKVHTDSFTQWRKR*LRLFTI Trigger: GATTGTAAATAGTCTTAACAATCGTTTCCTCCACTG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | ACAGGGTTTCTCAGTGTAGCTCTGGCTCTCCTGGATTaGCGCCTGGAACTCAGGGATCTGCCCATCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGFLSVALALLD*RLELRDLPIFV Trigger: GACAAAGATGGGCAGATCCCTGAGTTCCAGGCGCAAATCCAGGAGAGCCAGAGCTACACTGAGAAACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGAGATCACACGGAGGGTaGCGGAGTAGGAGGCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGRSHGG*RSRRHE Trigger: CTCGTGCCTCCTACTCCGTCACCCTCCGTGTGATCT...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAACTCTGTGGTGAATGCTaGCCTCTGCAGATGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RERLQKSPHSKGCIRRPKLCGEC*PLQMQG Trigger: ACCCTGCATCTGCAGAGGGCAGCATTCACCACAGAG...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGCTCTGTGGTGAATGCTaGCCTCTGCAGATGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGLCGEC*PLQMQG Trigger: ACCCTGCATCTGCAGAGGGCAGCATTCACCACAGAG...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCATCAGTCTTGCGGAGGTaGGTGCTCATCAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNTHSLLCDRAISTQRFSSVLRR*VLIRHS Trigger: GCTGTGCCTGATGAGCACCCACCTCCGCAAGACTGA...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGACATGGCTTTGAGGACTGGGGTTACCAAACTGTTCTAAACACAACAGGGGACAGACACCTGTACTaGTATCTCCTGCCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRHGFEDWGYQTVLNTTGDRHLY*YLLPLL Trigger: GAGCAAGGGCAGGAGATAGCAGTACAGGTGTCTGTC...CCCTGTTGTGTTTAGAACAGTTTGGTAACCCCAGTCCTCAAAGCCATGTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCATGCAGGGTCACTGGGTaGGCTGAAATGACTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFDTLHFPQDLRAQADLPCRVTG*AEMTTV Trigger: GACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCA...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTGCAGGGTCACTGGGTaGGCTGAAATGACTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKASLGYILKQRQMKASMCRVTG*AEMTTV Trigger: GACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | CCGACAAAGGCAGGCACTGAGCTCACTGGTTACAGTTaGAATCTCCTGCTGTCCTCTGTTTGTTTGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTKAGTELTGYS*NLLLSSVCLTL Trigger: AAGTGTCAAACAAACAGAGGACAGCAGGAGATTCAAACTGTAACCAGTGAGCTCAGTGCCTGCCTTTGTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTTTCCACCTCTGCTGTaGAGCTGCTGTCCTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKASLGYILKQRQMKASMFPPLL*SCCPFE Trigger: CTCAAAAGGACAGCAGCTGCACAGCAGAGGTGGAAA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTTTCCACCTCTGCTGTaGAGCTGCTGTCCTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAFPPLL*SCCPFE Trigger: CTCAAAAGGACAGCAGCTGCACAGCAGAGGTGGAAA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCAACCATTTTCCACCTCTaGTGTGCAGCTGCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFDTLHFPQDLRAQADLPTIFHL*CAAAVL Trigger: AAGGACAGCAGCTGCACAGCAGAGGTGGAAAATGGT...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAAGGAGAGGGACACTTCTaGCCAGTTCCTCAATATATC | + |
|
Preference number: 4 (lower is better) Translates to: RERLQKSPHSKGCIRRPKGEGHF*PVPQYI Trigger: GATATATTGAGGAACTGGCCAGAAGTGTCCCTCTCC...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTGTACTGCTATCTCCTaGCCTTGCTCGCTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKASLGYILKQRQMKASMCTAIS*PCSLRE Trigger: TTCTCTAAGCGAGCAAGGGCAGGAGATAGCAGTACA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGGTGAATGCTGCCCTCTaGAGATGCAGGGTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVVNAAL*RCRVTG Trigger: CCCAGTGACCCTGCATCTGCAGAGGGCAGCATTCAC...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | TGTGTAGTGGACAGGAAACAGACAAGCTCACTGGGCTaGACTCAAGAAGTAAGCCTAAAAGGCAGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVVDRKQTSSLG*TQEVSLKGRHS Trigger: ACTATGCCTGCCTTTTAGGCTTACTTCTTGAGTCAAGCCCAGTGAGCTTGTCTGTTTCCTGTCCACTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | GGTTACAGTTTGAATCTCCTGCTGTCCTCTGTTTGTTaGACACTTTACATTTCCCTCAGGACCTTCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSLNLLLSSVC*TLYISLRTFEL Trigger: GAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAAACAGAGGACAGCAGGAGATTCAAACTGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCAAACCCAGAGCAGCTaGCACAAGAGTGACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRQTQSS*HKSDHQ Trigger: CTGGTGGTCACTCTTGTGCCAGCTGCTCTGGGTTTG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGATCTCAAAGGCCTTCTaGAGTTTCTCAGCCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVISKAF*SFSAPS Trigger: CGAGGGGGCTGAGAAACTCCAGAAGGCCTTTGAGAT...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | CACTGGTTACAGTTTGAATCTCCTGCTGTCCTCTGTTaGTTTGACACTTTACATTTCCCTCAGGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HWLQFESPAVLC*FDTLHFPQDLR Trigger: TCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAAACAGAGGACAGCAGGAGATTCAAACTGTAACCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | AAGAGAGGCAAAGTAGCAGTGGGGGCTTTCTCACAATaGTCCCAGAGTCAGCAGTTCTTACCATGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGKVAVGAFSQ*SQSQQFLPCLY Trigger: ATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGAGAAAGCCCCCACTGCTACTTTGCCTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGAGAAGACACTCCAATaGAACATTTGTTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKASLGYILKQRQMKASMEKTLQ*NICSLF Trigger: AAAGAGGGAACAAATGTTTCATTGGAGTGTCTTCTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCACAAAGGCTACGCTGGTaGTATTTAGGAAGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTHSLLCDRAISTQRFSQRLRW*YLGSYQ Trigger: CTGATAACTTCCTAAATATCACCAGCGTAGCCTTTG...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGACCATTTTCCACCTCTaGTGTGCAGCTGCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVTIFHL*CAAAVL Trigger: AAGGACAGCAGCTGCACAGCAGAGGTGGAAAATGGT...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGGACAGACACCTGTACTaGTATCTCCTGCCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRDRHLY*YLLPLL Trigger: GAGCAAGGGCAGGAGATAGCAGTACAGGTGTCTGTC...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACAAACCCAGAGCAGCTaGCACAAGAGTGACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITILSICHLIKVHTDSFTQTQSS*HKSDHQ Trigger: CTGGTGGTCACTCTTGTGCCAGCTGCTCTGGGTTTG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | TCACAATTGTCCCAGAGTCAGCAGTTCTTACCATGTTTATATCAATGTGTAGTGTTGATTCGCTCCCAGTaGAGCCACATCTTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQLSQSQQFLPCLYQCVVLIRSQ*SHIFQT Trigger: GGTTTGGAAGATGTGGCTCCACTGGGAGCGAATCAA...CACTACACATTGATATAAACATGGTAAGAACTGCTGACTCTGGGACAATTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAAAAGGCAGTATTACCATATTATCCATATGCCACTTGATAAAAGTGCACATCTCAAAGGCCTTCTaGAGTTTCTCAGCCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DRKGSITILSICHLIKVHISKAF*SFSAPS Trigger: CGAGGGGGCTGAGAAACTCCAGAAGGCCTTTGAGAT...GTGCACTTTTATCAAGTGGCATATGGATAATATGGTAATACTGCCTTTTCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGTTGATTCGCTCCCAGTaGAGCCACATCTTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRLIRSQ*SHIFQT Trigger: GGTTTGGAAGATGTGGCTCCACTGGGAGCGAATCAA...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | GAGATACAAGTACTATCAAACAACACTCATTCCCTTTaGTGTGACAGGGCCATAAGCACCCAGAGATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EIQVLSNNTHSL*CDRAISTQRFS Trigger: TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACTTTTGGTCTCTGACTaGAGGTGGACAGACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITILSICHLIKVHTDSFTLLVSD*RWTDTC Trigger: ACAGGTGTCTGTCCACCTTCAGTCAGAGACCAAAAG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGGGAGAGGGACACTTCTaGCCAGTTCCTCAATATATC | + |
|
Preference number: 4 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRGEGHF*PVPQYI Trigger: GATATATTGAGGAACTGGCCAGAAGTGTCCCTCTCC...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGCTGTCCCAATGCTTTTaGTCTCTGACTGAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRLSQCF*SLTEGG Trigger: TCCACCTTCAGTCAGAGACCAAAAGCATTGGGACAG...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACTGTCCCAATGCTTTTaGTCTCTGACTGAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITILSICHLIKVHTDSFTLSQCF*SLTEGG Trigger: TCCACCTTCAGTCAGAGACCAAAAGCATTGGGACAG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACACAAAGGCTACGCTGGTaGTATTTAGGAAGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITILSICHLIKVHTDSFTQRLRW*YLGSYQ Trigger: CTGATAACTTCCTAAATATCACCAGCGTAGCCTTTG...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | CATTTTCTAAAACTCTGGTCATTCAATATGTCTACCTaGAAGTTCAAGACAATGTCCCTTCTAGGAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFLKLWSFNMST*KFKTMSLLGNV Trigger: CACGTTTCCTAGAAGGGACATTGTCTTGAACTTCAAGGTAGACATATTGAATGACCAGAGTTTTAGAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| 3UTR CAA 72 bp | AAACTAATCTATAAAATTCAGCCAGACAGAAAGATATaGACACCAGCTGGTAACAGACTTTCAGACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLIYKIQPDRKI*TPAGNRLSDCG Trigger: ACCACAGTCTGAAAGTCTGTTACCAGCTGGTGTCAATATCTTTCTGTCTGGCTGAATTTTATAGATTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR TCA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACAGAGAAGACACTCCAATaGAACATTTGTTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITILSICHLIKVHTDSFTEKTLQ*NICSLF Trigger: AAAGAGGGAACAAATGTTTCATTGGAGTGTCTTCTC...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS CCA 90 bp | AGAGGTGAAGATCACACGGAGGGTGACGGAGTAGGAGGCACGAGCTaGAGAAGTGATGATACATGTATAGAGCCCACGGTCATCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGEDHTEGDGVGGTS*RSDDTCIEPTVIKG Trigger: GCCTTTGATGACCGTGGGCTCTATACATGTATCATCACTTCTCCAGCTCGTGCCTCCTACTCCGTCACCCTCCGTGTGATCTTCACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGCCAGCTCGAGGGTTTaGGCTGAGGTGATGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKASLGYILKQRQMKASMASSRV*AEVMMG Trigger: CCCCATCATCACCTCAGCCAAAACCCTCGAGCTGGC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCATCTCCACCAGGAGAGTaGCTTCGGCCTAGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFDTLHFPQDLRAQADLPSPPGE*LRPSSG Trigger: CCCAGAGCTAGGCCGAAGCAACTCTCCTGGTGGAGA...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS CCA 90 bp | CACTCTGTGGTGAATGCTGCCCTCTGCAGATGCAGGGTCACTGGGTaGGCTGAAATGACTACTGTCTTGAGAATCTGTCCCAATGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVVNAALCRCRVTG*AEMTTVLRICPNAF Trigger: AAAAGCATTGGGACAGATTCTCAAGACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCATCTGCAGAGGGCAGCATTCACCACAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTATGGCCTTCTCAGTCTaGCGGAGGTGGGTGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAMAFSV*RRWVLI Trigger: GATGAGCACCCACCTCCGCAAGACTGAGAAGGCCAT...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCATCTCCACCAGGAGAGTaGCTTCGGCCTAGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NNTHSLLCDRAISTQRFSSPPGE*LRPSSG Trigger: CCCAGAGCTAGGCCGAAGCAACTCTCCTGGTGGAGA...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAACACATAGATGCCACTTaGAGCGTCCAAAGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RERLQKSPHSKGCIRRPKHIDAT*SVQSRS Trigger: AGACCTGCTTTGGACGCTCAAAGTGGCATCTATGTG...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS TCA 90 bp | GAAATGACTACTGTCTTGAGAATCTGTCCCAATGCTTTTGGTCTCTaGCTGAAGGTGGACAGACACCTGTACTGCTATCTCCTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EMTTVLRICPNAFGL*LKVDRHLYCYLLPL Trigger: CAAGGGCAGGAGATAGCAGTACAGGTGTCTGTCCACCTTCAGTCAGAGACCAAAAGCATTGGGACAGATTCTCAAGACAGTAGTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTGCAGCTGCTGTCCTTTaGAGTTGTACCAGTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LDEKTVVLEGGYIRVTMAAAAVL*SCTSGL Trigger: AAGTCCACTGGTACAACTCAAAAGGACAGCAGCTGC...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGACACTTTACATTTCCCTCAGGACCTTCGAGCTCAAGCAGATCTCCCACACATAGATGCCACTTaGAGCGTCCAAAGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFDTLHFPQDLRAQADLPHIDAT*SVQSRS Trigger: AGACCTGCTTTGGACGCTCAAAGTGGCATCTATGTG...TGGGAGATCTGCTTGAGCTCGAAGGTCCTGAGGGAAATGTAAAGTGTCAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS TCA 90 bp | TGCAGCTGCTGTCCTTTTGAGTTGTACCAGTGGACTTCTCCATACTaGTCCACCGTGAGAAGACACTCCAATGAAACATTTGTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSCCPFELYQWTSPY*STVRRHSNETFVPS Trigger: AGAGGGAACAAATGTTTCATTGGAGTGTCTTCTCACGGTGGATCAGTATGGAGAAGTCCACTGGTACAACTCAAAAGGACAGCAGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020830.14 ENSMUST00000108848.2 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | CTAGATGAGAAGACTGTGGTTCTGGAAGGAGGATACATTAGAGTGACGATGGCTTGCATTGTAAGAACTTaGATTCGCTCCCAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDEKTVVLEGGYIRVTMACIVRT*IRSQWS Trigger: GCTCCACTGGGAGCGAATCAAAGTTCTTACAATGCA...AGCCATCGTCACTCTAATGTATCCTCCTTCCAGAACCACAGTCTTCTCATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGTGCTGTCCTTTTGAGTaGTACCAGTGGACTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKASLGYILKQRQMKASMCCPFE*YQWTSP Trigger: TGGAGAAGTCCACTGGTACAACTCAAAAGGACAGCA...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
||
| CDS-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCATGCATTGTAAGAACTTaGATTCGCTCCCAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NNTHSLLCDRAISTQRFSCIVRT*IRSQWS Trigger: GCTCCACTGGGAGCGAATCAAAGTTCTTACAATGCA...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | CGAGAAAGGCTACAAAAGAGCCCTCACTCAAAAGGATGCATCCGAAGACCCAAACTGAGAGTTCAAAGCTaGGGAGAAATGATGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: RERLQKSPHSKGCIRRPKLRVQS*GEMMHC Trigger: ACAATGCATCATTTCTCCCAAGCTTTGAACTCTCAG...TTTGGGTCTTCGGATGCATCCTTTTGAGTGAGGGCTCTTTTGTAGCCTTTCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACAGCCAGCTCGAGGGTTTaGGCTGAGGTGATGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: ITILSICHLIKVHTDSFTASSRV*AEVMMG Trigger: CCCCATCATCACCTCAGCCAAAACCCTCGAGCTGGC...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACAATGGCCTTCTCAGTCTaGCGGAGGTGGGTGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: ITILSICHLIKVHTDSFTMAFSV*RRWVLI Trigger: GATGAGCACCCACCTCCGCAAGACTGAGAAGGCCAT...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | TTCAAGGCTAGCCTAGGCTACATACTGAAACAAAGGCAGATGAAGGCTAGCATGGAAATGACTACTGTCTaGAGAATCTGTCCCAATGCT | + |
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Preference number: 5 (lower is better) Translates to: FKASLGYILKQRQMKASMEMTTV*RICPNA Trigger: AGCATTGGGACAGATTCTCAAGACAGTAGTCATTTC...CATGCTAGCCTTCATCTGCCTTTGTTTCAGTATGTAGCCTAGGCTAGCCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | AACAACACTCATTCCCTTTTGTGTGACAGGGCCATAAGCACCCAGAGATTTTCACTGAGAGTTCAAAGCTaGGGAGAAATGATGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: NNTHSLLCDRAISTQRFSLRVQS*GEMMHC Trigger: ACAATGCATCATTTCTCCCAAGCTTTGAACTCTCAG...TGAAAATCTCTGGGTGCTTATGGCCCTGTCACACAAAAGGGAATGAGTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | ATTGTTGAGATACAAGTACTATCAAACAACACTCATTCCCTTTTGTGTGACAGGGCAGCTGCTGTCCTTTaGAGTTGTACCAGTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: IVEIQVLSNNTHSLLCDRAAAVL*SCTSGL Trigger: AAGTCCACTGGTACAACTCAAAAGGACAGCAGCTGC...CCTGTCACACAAAAGGGAATGAGTGTTGTTTGATAGTACTTGTATCTCAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS-3UTR CAA 90 bp | ATTACCATATTATCCATATGCCACTTGATAAAAGTGCACACTGATTCGTTCACAGAAATGACTACTGTCTaGAGAATCTGTCCCAATGCT | + |
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Preference number: 5 (lower is better) Translates to: ITILSICHLIKVHTDSFTEMTTV*RICPNA Trigger: AGCATTGGGACAGATTCTCAAGACAGTAGTCATTTC...TGTGAACGAATCAGTGTGCACTTTTATCAAGTGGCATATGGATAATATGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS TCA 72 bp | TGCTGCCCTCTGCAGATGCAGGGTCACTGGGTGGGCTaGAATGACTACTGTCTTGAGAATCTGTCCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: CCPLQMQGHWVG*NDYCLENLSQC Trigger: GCATTGGGACAGATTCTCAAGACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCATCTGCAGAGGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS GCA 72 bp | TATGCTCACTCTGTGGTGAATGCTGCCCTCTGCAGATaGAGGGTCACTGGGTGGGCTGAAATGACTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: YAHSVVNAALCR*RVTGWAEMTTV Trigger: GACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCATCTGCAGAGGGCAGCATTCACCACAGAGTGAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS CCA 72 bp | GTGAATGCTGCCCTCTGCAGATGCAGGGTCACTGGGTaGGCTGAAATGACTACTGTCTTGAGAATCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VNAALCRCRVTG*AEMTTVLRICP Trigger: GGGACAGATTCTCAAGACAGTAGTCATTTCAGCCCACCCAGTGACCCTGCATCTGCAGAGGGCAGCATTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS GCA 72 bp | AGGTGGACAGACACCTGTACTGCTATCTCCTGCCCTTaGTCGCTTAGAGAACCATCATCTGAATCTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RWTDTCTAISCP*SLREPSSESPP Trigger: TGGTGGAGATTCAGATGATGGTTCTCTAAGCGAGCAAGGGCAGGAGATAGCAGTACAGGTGTCTGTCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS CCA 72 bp | AATGACTACTGTCTTGAGAATCTGTCCCAATGCTTTTaGTCTCTGACTGAAGGTGGACAGACACCTGTACTG | + |
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Preference number: 6 (lower is better) Translates to: NDYCLENLSQCF*SLTEGGQTPVL Trigger: CAGTACAGGTGTCTGTCCACCTTCAGTCAGAGACCAAAAGCATTGGGACAGATTCTCAAGACAGTAGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS GCA 72 bp | TTAGGAAGTTATCAGAAACCAACCATTTTCCACCTCTaGTGTGCAGCTGCTGTCCTTTTGAGTTGTACCAGT | + |
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Preference number: 6 (lower is better) Translates to: LGSYQKPTIFHL*CAAAVLLSCTS Trigger: ACTGGTACAACTCAAAAGGACAGCAGCTGCACAGCAGAGGTGGAAAATGGTTGGTTTCTGATAACTTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020830.14 ENSMUST00000108848.2 ENSMUST00000108849.8 |
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| CDS TCA 72 bp | TGTCCTTTTGAGTTGTACCAGTGGACTTCTCCATACTaGTCCACCGTGAGAAGACACTCCAATGAAACATTT | + |
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Preference number: 6 (lower is better) Translates to: CPFELYQWTSPY*STVRRHSNETF Trigger: AAATGTTTCATTGGAGTGTCTTCTCACGGTGGATCAGTATGGAGAAGTCCACTGGTACAACTCAAAAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020830.14 ENSMUST00000108848.2 ENSMUST00000108849.8 |
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| CDS TCA 72 bp | ATGTATAGAGCCCACGGTCATCAAAGGCTACGCTGGTaGTATTTAGGAAGTTATCAGAAACCAACCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: MYRAHGHQRLRW*YLGSYQKPTIF Trigger: GAAAATGGTTGGTTTCTGATAACTTCCTAAATATCACCAGCGTAGCCTTTGATGACCGTGGGCTCTATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020830.14 ENSMUST00000108849.8 |
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| CDS TCA 72 bp | TTCTCCATACTGATCCACCGTGAGAAGACACTCCAATaGAACATTTGTTCCCTCTTTGACTATAATGACATC | + |
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Preference number: 6 (lower is better) Translates to: FSILIHREKTLQ*NICSLFDYNDI Trigger: GATGTCATTATAGTCAAAGAGGGAACAAATGTTTCATTGGAGTGTCTTCTCACGGTGGATCAGTATGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020830.14 ENSMUST00000108848.2 ENSMUST00000108849.8 |
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