Pregenerated sensors for MFAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060572Ensembl transcript IDs: ENSMUST00000071977.9, ENSMUST00000166376.9
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCACAGCCTACCTGAGGAGACTGAGGAGGGCTGCCCCCAGGCACTaGGAAGGCACAGTGAGAAGCCCAGGCCCCACAACGAGGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: GTAYLRRLRRAAPRH*EGTVRSPGPTTRPW Trigger: CCAAGGCCTCGTTGTGGGGCCTGGGCTTCTCACTGTGCCTTCTCAGTGCCTGGGGGCAGCCCTCCTCAGTCTCCTCAGGTAGGCTGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071977.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGGAGGTGGATCCGAGCTaGGTCCAGGGCTCGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGEVDPS*VQGSNL Trigger: GAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTC...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGAGGCAGGGCCTGAGGTaGATCCGAGCTGGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CDHTPQGSSPLMSGMKGRRQGLR*IRAGSR Trigger: CCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCT...CCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGCAGGATGGGGAGAAAGGCAGGGCCTGAGGTaGATCCGAGCTGGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QGSSPLMSGMKGRAGWGERQGLR*IRAGSR Trigger: CCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCT...TTCTCCCCATCCTGCCCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGAAAGGGAGGGCAGGATaGGGAGAAAGCACCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMKGRAG*GESTRS Trigger: TGACCTGGTGCTTTCTCCCCATCCTGCCCTCCCTTT...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| 3UTR TCA 72 bp | TACCTGAGGAGACTGAGGAGGGCTGCCCCCAGGCACTaGGAAGGCACAGTGAGAAGCCCAGGCCCCACAACG | + |
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Preference number: 3 (lower is better) Translates to: YLRRLRRAAPRH*EGTVRSPGPTT Trigger: CGTTGTGGGGCCTGGGCTTCTCACTGTGCCTTCTCAGTGCCTGGGGGCAGCCCTCCTCAGTCTCCTCAGGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071977.9 |
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| 3UTR GCA 72 bp | AAGGGGCACAGCCTACCTGAGGAGACTGAGGAGGGCTaGCCCCAGGCACTGAGAAGGCACAGTGAGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KGHSLPEETEEG*PQALRRHSEKP Trigger: GGGCTTCTCACTGTGCCTTCTCAGTGCCTGGGGGCAGCCCTCCTCAGTCTCCTCAGGTAGGCTGTGCCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071977.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGAGTCTCCAGGTCCCCTaGAGCTGCTGGCTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMSLQVP*SCWLWG Trigger: ACCCCAGAGCCAGCAGCTGCAGGGGACCTGGAGACT...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGGACATGGTCCGGGAATaGGGGGAGAGGATCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGDMVRE*GERIQV Trigger: GACCTGGATCCTCTCCCCCCATTCCCGGACCATGTC...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCATGCAGCTGCTGGCTCTaGGGTAGGGGCTGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPCSCWL*GRGWDD Trigger: GTCATCCCAGCCCCTACCCCAGAGCCAGCAGCTGCA...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAAGGTCATATTGGCCCTaGGCCAGCAGGCCAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPRSYWP*ASRPGM Trigger: CATGCCTGGCCTGCTGGCTCAGGGCCAATATGACCT...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAGACATGGTCCGGGAATaGGGGGAGAGGATCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPDMVRE*GERIQV Trigger: GACCTGGATCCTCTCCCCCCATTCCCGGACCATGTC...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGTGCAAGGCTTGTGGATaGAGTAGAGGCGGGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGCKACG*SRGGCT Trigger: CGTGCACCCGCCTCTACTCCATCCACAAGCCTTGCA...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTGCAAGGCTTGTGGATaGAGTAGAGGCGGGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMCKACG*SRGGCT Trigger: CGTGCACCCGCCTCTACTCCATCCACAAGCCTTGCA...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR TCA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGGGGATGACTTCCTGTTaGACTTGCTGCTGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMGMTSC*TCCWDW Trigger: CCAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCC...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGCAGGATGGGGAGAAAGTCTCCAGGTCCCCTaGAGCTGCTGGCTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QGSSPLMSGMKGRAGWGESLQVP*SCWLWG Trigger: ACCCCAGAGCCAGCAGCTGCAGGGGACCTGGAGACT...TTCTCCCCATCCTGCCCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAGTGGAGTAGAGGCGGGTaGACGGGTACTGTTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: RQGLRWIRAGSRARISHQWSRGG*TGTVLR Trigger: GCGAAGAACAGTACCCGTGCACCCGCCTCTACTCCA...CTGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGCTCTGGGGTAGGGGCTaGGATGACTTCCTGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGLWGRG*DDFLLN Trigger: GTTCAACAGGAAGTCATCCCAGCCCCTACCCCAGAG...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAACTTGCTGCTGGGACTaGAACTGCTCTTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPTCCWD*NCSSGV Trigger: GACCCCTGAAGAGCAGTTCCAGTCCCAGCAGCAAGT...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGCGTGGGCACAGACAGTaGGGACACATATTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMRGHRQ*GHIFPC Trigger: ACAAGGAAATATGTGTCCGCACTGTCTGTGCCCACG...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR TCA 90 bp | TGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGGGATGACTTCCTGTTaGACTTGCTGCTGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: CDHTPQGSSPLMSGMKGRGMTSC*TCCWDW Trigger: CCAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCC...CCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR GCA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGGTAGTCATAGTAGTCTaGGTTGTCAATCTGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGVVIVV*VVNLVA Trigger: GGCGACCAGATTGACAACGCAGACTACTATGACTAC...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CCA 90 bp | TGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGACTTGCTGCTGGGACTaGAACTGCTCTTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CDHTPQGSSPLMSGMKGRTCCWD*NCSSGV Trigger: GACCCCTGAAGAGCAGTTCCAGTCCCAGCAGCAAGT...CCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAGAGAAGCAGACCTCATTaGGACACTGTTTGCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RQGLRWIRAGSRARISHQRSRPH*DTVCKA Trigger: AGCCTTGCAAACAGTGTCTCAATGAGGTCTGCTTCT...CTGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAAGAAGCAGACCTCATTaGGACACTGTTTGCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPRSRPH*DTVCKA Trigger: AGCCTTGCAAACAGTGTCTCAATGAGGTCTGCTTCT...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGCAGGATGGGGAGAAGTAGTCATAGTAGTCTaGGTTGTCAATCTGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: QGSSPLMSGMKGRAGWGEVVIVV*VVNLVA Trigger: GGCGACCAGATTGACAACGCAGACTACTATGACTAC...TTCTCCCCATCCTGCCCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGGGAGGCAGCCACAGATaGGCACAGGCCACTGACGGC | + |
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Preference number: 5 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMGGSHR*AQATDG Trigger: GCCGTCAGTGGCCTGTGCCAATCTGTGGCTGCCTCC...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGAGGATCCAGGTCATATaGGCCCTGAGCCAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMRIQVI*ALSQQA Trigger: GGCCTGCTGGCTCAGGGCCAATATGACCTGGATCCT...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAAGGATCCAGGTCATATaGGCCCTGAGCCAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPRIQVI*ALSQQA Trigger: GGCCTGCTGGCTCAGGGCCAATATGACCTGGATCCT...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS CCA 90 bp | AGGCTCGGTAGGCTCAGTCTCCAGGTCCCCTGCAGCTGCTGGCTCTaGGGTAGGGGCTGGGATGACTTCCTGTTGAACTTGCTGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RLGRLSLQVPCSCWL*GRGWDDFLLNLLLG Trigger: TCCCAGCAGCAAGTTCAACAGGAAGTCATCCCAGCCCCTACCCCAGAGCCAGCAGCTGCAGGGGACCTGGAGACTGAGCCTACCGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCATGGGATGACTTCCTGTaGAACTTGCTGCTGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: QAGPEVDPSWVQGSNLTPWDDFL*NLLLGL Trigger: CAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCCA...TGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS CCA 90 bp | GTCAATCTGGTCGCCATAGTGGTTGTACTGGACATGGTCCGGGAATaGGGGGAGAGGATCCAGGTCATATTGGCCCTGAGCCAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VNLVAIVVVLDMVRE*GERIQVILALSQQA Trigger: GGCCTGCTGGCTCAGGGCCAATATGACCTGGATCCTCTCCCCCCATTCCCGGACCATGTCCAGTACAACCACTATGGCGACCAGATTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | GCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGTCATTGAGACACTGTTaGCAAGGCTTGTGGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: AQGSCDHTPQGSSPLMSGSLRHC*QGLWME Trigger: CTCCATCCACAAGCCTTGCAAACAGTGTCTCAATGA...CCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCCCAAGGCAGCTGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGACACATATTTCCTTGTaGACCACATACACTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GGAQGSCDHTPQGSSPLMTHISL*TTYTRR Trigger: CCGCCGAGTGTATGTGGTCAACAAGGAAATATGTGT...CATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACAGCTGCCTTGGGCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | TGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGACTTCCTGTTGAACTaGCTGCTGGGACTGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: CDHTPQGSSPLMSGMKGRDFLLN*LLGLEL Trigger: CAGTTCCAGTCCCAGCAGCAAGTTCAACAGGAAGTC...CCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | CAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGCAGGATGGGGAGAAGACTTCCTGTTGAACTaGCTGCTGGGACTGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: QGSSPLMSGMKGRAGWGEDFLLN*LLGLEL Trigger: CAGTTCCAGTCCCAGCAGCAAGTTCAACAGGAAGTC...TTCTCCCCATCCTGCCCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGCCTGAGGTGGATCCGAGCTGGGTCCAGGGCTCGAATCTCACACCAGCGGACACATATTTCCTaGTTGACCACATACACTCGG | + |
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Preference number: 5 (lower is better) Translates to: RQGLRWIRAGSRARISHQRTHIS*LTTYTR Trigger: CCGAGTGTATGTGGTCAACAAGGAAATATGTGTCCG...CTGGTGTGAGATTCGAGCCCTGGACCCAGCTCGGATCCACCTCAGGCCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | CAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGGCAGGATGGGGAGAATCATTGAGACACTGTTaGCAAGGCTTGTGGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: QGSSPLMSGMKGRAGWGESLRHC*QGLWME Trigger: CTCCATCCACAAGCCTTGCAAACAGTGTCTCAATGA...TTCTCCCCATCCTGCCCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS-3UTR CAA 90 bp | TGTGACCACACTCCCCAGGGTAGCAGCCCACTGATGTCCGGGATGAAAGGGAGGCGGACACATATTTCCTaGTTGACCACATACACTCGG | + |
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Preference number: 5 (lower is better) Translates to: CDHTPQGSSPLMSGMKGRRTHIS*LTTYTR Trigger: CCGAGTGTATGTGGTCAACAAGGAAATATGTGTCCG...CCTCCCTTTCATCCCGGACATCAGTGGGCTGCTACCCTGGGGAGTGTGGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS TCA 72 bp | GCTGGCTCTGGGGTAGGGGCTGGGATGACTTCCTGTTaGACTTGCTGCTGGGACTGGAACTGCTCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AGSGVGAGMTSC*TCCWDWNCSSG Trigger: CCCTGAAGAGCAGTTCCAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCCAGCCCCTACCCCAGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS GCA 72 bp | ACTGTTTGCAAGGCTTGTGGATGGAGTAGAGGCGGGTaGACGGGTACTGTTCTTCGCGGCAGTCAAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVCKACGWSRGG*TGTVLRGSQEG Trigger: GCCCTCTTGACTGCCGCGAAGAACAGTACCCGTGCACCCGCCTCTACTCCATCCACAAGCCTTGCAAACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS CCA 72 bp | GTCGCCATAGTGGTTGTACTGGACATGGTCCGGGAATaGGGGGAGAGGATCCAGGTCATATTGGCCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VAIVVVLDMVRE*GERIQVILALS Trigger: GCTCAGGGCCAATATGACCTGGATCCTCTCCCCCCATTCCCGGACCATGTCCAGTACAACCACTATGGCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS CAA 72 bp | TGCTGGCTCTGGGGTAGGGGCTGGGATGACTTCCTGTaGAACTTGCTGCTGGGACTGGAACTGCTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CWLWGRGWDDFL*NLLLGLELLFR Trigger: CCTGAAGAGCAGTTCCAGTCCCAGCAGCAAGTTCAACAGGAAGTCATCCCAGCCCCTACCCCAGAGCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS TCA 72 bp | CGTGGGCACAGACAGTGCGGACACATATTTCCTTGTTaGCCACATACACTCGGCGGAGGCTGTAGAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGHRQCGHIFPC*PHTLGGGCRSR Trigger: TCTGCTTCTACAGCCTCCGCCGAGTGTATGTGGTCAACAAGGAAATATGTGTCCGCACTGTCTGTGCCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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| CDS TCA 72 bp | CATACACTCGGCGGAGGCTGTAGAAGCAGACCTCATTaGGACACTGTTTGCAAGGCTTGTGGATGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HTLGGGCRSRPH*DTVCKACGWSR Trigger: TCTACTCCATCCACAAGCCTTGCAAACAGTGTCTCAATGAGGTCTGCTTCTACAGCCTCCGCCGAGTGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071977.9 ENSMUST00000166376.9 |
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