Pregenerated sensors for MFAP1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048222Ensembl transcript IDs: ENSMUST00000056732.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGATGGTCTCAAACTCAGAGATTCACCTaGCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGCTCAACCAC | + |
|
Preference number: 1 (lower is better) Translates to: NSLCRPGWSQTQRFT*LCLPSAGIKGVLNH Trigger: GTGGTTGAGCACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCTGGTCTACAGAGTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR TCA 90 bp | CCTGGTGCAGGAATTAAAGGTGTCTGCCACCATGTCCACTTTGGATaGGTGAATTCTTCATTTTCCTGCTTCTACCTCCCAAGTGTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: PGAGIKGVCHHVHFG*VNSSFSCFYLPSVR Trigger: CCTAACACTTGGGAGGTAGAAGCAGGAAAATGAAGAATTCACTCATCCAAAGTGGACATGGTGGCAGACACCTTTAATTCCTGCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CCA 90 bp | TGCTTTTTAAATACATCTCATGTGAACACTAATTCATACATTCCATaGAATACATATGGAAGTCAGATGTCAATTTGCTGGTTGCCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: CFLNTSHVNTNSYIP*NTYGSQMSICWLPD Trigger: GTCTGGCAACCAGCAAATTGACATCTGACTTCCATATGTATTCCATGGAATGTATGAATTAGTGTTCACATGAGATGTATTTAAAAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGATGGTCTCAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATGGGACTGAAGGCATGTaGTGCTCTGTTCACTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: RMVSNSEIHLPLPPQCRDGTEGM*CSVHWT Trigger: AGTCCAGTGAACAGAGCAGCACATGCCTTCAGTCCC...ATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CAA 90 bp | ACTGAGTTATCTACTGCTATGTTCATCTATAGGATCAAACTCAGGTaGCTAAGACTTGTAGGCAGGGCTTCTCAACTTCAAGAACTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TELSTAMFIYRIKLR*LRLVGRASQLQELH Trigger: ATGCAGTTCTTGAAGTTGAGAAGCCCTGCCTACAAGTCTTAGCAACCTGAGTTTGATCCTATAGATGAACATAGCAGTAGATAACTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR GCA 72 bp | CCAGGATGGTCTCAAACTCAGAGATTCACCTGCCTCTaGCTCCCCAGTGCAGGGATTAAAGGTGTGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWSQTQRFTCL*LPSAGIKGVLN Trigger: GTTGAGCACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGATGGTCTCAAACTCAGAGATTCACCTaGCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWSQTQRFT*LCLPSAGIKGV Trigger: CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCTGGTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR TCA 72 bp | GGAATTAAAGGTGTCTGCCACCATGTCCACTTTGGATaGGTGAATTCTTCATTTTCCTGCTTCTACCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GIKGVCHHVHFG*VNSSFSCFYLP Trigger: TGGGAGGTAGAAGCAGGAAAATGAAGAATTCACTCATCCAAAGTGGACATGGTGGCAGACACCTTTAATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CCA 72 bp | CCAAACCTCTTAGAAAGCACCTTCAAACACAAGTTATaGCCGCAAGTCTGGAAAGCTCTATACAAGAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: PNLLESTFKHKL*PQVWKALYKNH Trigger: ATGGTTCTTGTATAGAGCTTTCCAGACTTGCGGCCATAACTTGTGTTTGAAGGTGCTTTCTAAGAGGTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CCA 72 bp | GAAAGCACCTTCAAACACAAGTTATGGCCGCAAGTCTaGAAAGCTCTATACAAGAACCATGTAAATAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESTFKHKLWPQV*KALYKNHVNNG Trigger: ACCATTATTTACATGGTTCTTGTATAGAGCTTTCCAGACTTGCGGCCATAACTTGTGTTTGAAGGTGCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR GCA 72 bp | GGAATACATATGGAAGTCAGATGTCAATTTGCTGGTTaGCAGACTGAGTTATCTACTGCTATGTTCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GIHMEVRCQFAG*QTELSTAMFIY Trigger: ATAGATGAACATAGCAGTAGATAACTCAGTCTGGCAACCAGCAAATTGACATCTGACTTCCATATGTATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CCA 72 bp | ATTTATAAGATTCAACACCACAAATGGAAAACAGGTTaGACTGAGCTTGGATTTCCTGATAGCCTACTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: IYKIQHHKWKTG*TELGFPDSLLL Trigger: TAGGAGTAGGCTATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTTATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR TCA 72 bp | TCTCAAATGTCTGAGTCTGTTTCAGGAATCAAAAGATaGTCTAAATATAAATTGGCAAGAGCATGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQMSESVSGIKR*SKYKLARAWKT Trigger: TGTCTTCCATGCTCTTGCCAATTTATATTTAGATCATCTTTTGATTCCTGAAACAGACTCAGACATTTGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AGGATGGTCTCAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATTGGGCGGCTGCTTCATaGGTGCGCTTGGGACCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RMVSNSEIHLPLPPQCRDWAAAS*VRLGPT Trigger: TGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCA...ATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AGGGATGGCCTTAAACTCAGATCTGGCTGTCTCTGCCTCCTGGTGCAGGAATTACTTCCACATCTTCACTaGTGCGGTTCTGTAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDGLKLRSGCLCLLVQELLPHLH*CGSVTA Trigger: GGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAG...TAATTCCTGCACCAGGAGGCAGAGACAGCCAGATCTGAGTTTAAGGCCATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCATTTTCCTGCTTCTACCTCCCAAGTGTTAGGATTACAGGTGTGTGTACTCTCCTGTGCTCGCTaGCGCATCATGCCACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ILHFPASTSQVLGLQVCVLSCAR*RIMPRR Trigger: GCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAG...TACACACACCTGTAATCCTAACACTTGGGAGGTAGAAGCAGGAAAATGAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AGGGATGGCCTTAAACTCAGATCTGGCTGTCTCTGCCTCCTGGTGCAGGAATTAAAGGAAGTGGTATCTTaGTCCACAAGGTGGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGLKLRSGCLCLLVQELKEVVS*STRWVY Trigger: GTACACCCACCTTGTGGATCAAGATACCACTTCCTT...TAATTCCTGCACCAGGAGGCAGAGACAGCCAGATCTGAGTTTAAGGCCATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | ATTCTTCATTTTCCTGCTTCTACCTCCCAAGTGTTAGGATTACAGGTGTGTGTAGCCCCAGCCGTAGACTaGATGGGCGGCTGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILHFPASTSQVLGLQVCVAPAVD*MGGCFM Trigger: CATGAAGCAGCCGCCCATCCAGTCTACGGCTGGGGC...TACACACACCTGTAATCCTAACACTTGGGAGGTAGAAGCAGGAAAATGAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | ATAGAACACTTGGCTAGTATTTACGAAGCCCTGGGTTCAAATTCTAATATGGAATCGGGGGTCACTGGATaGGTCCTCCTCCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IEHLASIYEALGSNSNMESGVTG*VLLLFL Trigger: GAGGAACAGGAGGAGGACTCATCCAGTGACCCCCGA...TTCCATATTAGAATTTGAACCCAGGGCTTCGTAAATACTAGCCAAGTGTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATTTTCTCGTTTCGAACTaGGACGGCCCCAGCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDFLVSN*DGPSRR Trigger: TCTACGGCTGGGGCCGTCCCAGTTCGAAACGAGAAA...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCATTTTCCTGCTTCTACCTCCCAAGTGTTAGGATTACAGGTGTGTGTAATCCCCTTCTACTTCTaGGTCGCTCTCTCCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHFPASTSQVLGLQVCVIPFYF*VALSHY Trigger: GTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGAT...TACACACACCTGTAATCCTAACACTTGGGAGGTAGAAGCAGGAAAATGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGTTCTGGGCACTCTCTTaGCCCCATGCAGAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IRFNTTNGKQVGLSLDFLFWALS*PHAESK Trigger: CTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAA...CAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATCTTCATCCTCATCCATaGAGAAGGCACCTCGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDLHPHP*RRHLGD Trigger: ATCACCGAGGTGCCTTCTTCATGGATGAGGATGAAG...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGAAAGAAAGAATACACCATCCATTCATATGTCCAGGTATCTGATCCAGGAAGTCGGGGGTCACTaGATGAGTCCTCCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEERKNTPSIHMSRYLIQEVGGH*MSPPPV Trigger: AACAGGAGGAGGACTCATCCAGTGACCCCCGACTTC...CTGGATCAGATACCTGGACATATGAATGGATGGTGTATTCTTTCTTTCTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGAAAGAAAGAATACACCATCCATTCATATGTCCAGGTATCTGATCCAGCTCATACTCAGACTCTaGCTCAGACTCCTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEERKNTPSIHMSRYLIQLILRL*LRLLPR Trigger: TCTGGGGAGGAGTCTGAGTCAGAGTCTGAGTATGAG...CTGGATCAGATACCTGGACATATGAATGGATGGTGTATTCTTTCTTTCTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATCCTCTTCTTGGCAGATaGTCGCTCAAATACATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDPLLGR*SLKYIS Trigger: CGAGATGTATTTGAGCGACCATCTGCCAAGAAGAGG...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATCATAGGGGCATAATCTaGTCTCTTTCCGGACACATA | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDHRGII*SLSGHI Trigger: TATGTGTCCGGAAAGAGACCAGATTATGCCCCTATG...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| 3UTR CAA 72 bp | TCTACTGCTATGTTCATCTATAGGATCAAACTCAGGTaGCTAAGACTTGTAGGCAGGGCTTCTCAACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STAMFIYRIKLR*LRLVGRASQLQ Trigger: TTGAAGTTGAGAAGCCCTGCCTACAAGTCTTAGCAACCTGAGTTTGATCCTATAGATGAACATAGCAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATCTTCACCTTTTCCATTaGGATCTCACCTTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDLHLFH*DLTFLV Trigger: AACGAGAAAGGTGAGATCTCAATGGAAAAGGTGAAG...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | TTTATACAAGGTCCTAGACTTAGTTCCCACTTTAGTGGTAGGAACACAAGTTTATTCATCCTCTTCATCTaGGGACTCCATAGGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: FIQGPRLSSHFSGRNTSLFILFI*GLHRGI Trigger: TATGCCCCTATGGAGTCCTCAGATGAAGAGGATGAA...TAAACTTGTGTTCCTACCACTAAAGTGGGAACTAAGTCTAGGACCTTGTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR TCA 90 bp | ATAGAACACTTGGCTAGTATTTACGAAGCCCTGGGTTCAAATTCTAATATGGAATTTCATCATCAGTATTaGGCGCATCCAGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IEHLASIYEALGSNSNMEFHHQY*AHPGQQ Trigger: TTGCTGCCCTGGATGCGCTCAATACTGATGATGAAA...TTCCATATTAGAATTTGAACCCAGGGCTTCGTAAATACTAGCCAAGTGTTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGCAGAGTCAAAGGAAGTaGTATCTTGATCCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRFNTTNGKQVGLSLDFLQSQRK*YLDPQG Trigger: ACCTTGTGGATCAAGATACCACTTCCTTTGACTCTG...CAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATTGGTTTTCCTCTTCTTaGCAGATGGTCGCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KIQHHKWKTGWTELGFPDWFSSS*QMVAQI Trigger: TATTTGAGCGACCATCTGCCAAGAAGAGGAAAACCA...ATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGAAAGAAAGAATACACCATCCATTCATATGTCCAGGTATCTGATCCAGATGGTTTTGTTGAAATaGTCCTCAAGAGTAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEERKNTPSIHMSRYLIQMVLLK*SSRVGA Trigger: TGCACCTACTCTTGAGGACCATTTCAACAAAACCAT...CTGGATCAGATACCTGGACATATGAATGGATGGTGTATTCTTTCTTTCTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS GCA 90 bp | CTCAGCCATGCGTTTTGCTTCTTGTTCCAGTTCCTTCTGTTTCAATaGTTCAGCTTCTCGTTCTTGAACTGTCACCCGATCCTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSHAFCFLFQFLLFQ*FSFSFLNCHPILLS Trigger: CGAAAGAAGGATCGGGTGACAGTTCAAGAACGAGAAGCTGAAGCATTGAAACAGAAGGAACTGGAACAAGAAGCAAAACGCATGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS TCA 72 bp | TTCTGTGTCGAGCCAATCGCTCTTCCACATCTTCACTaGTGCGGTTCTGTAACCGCCGAAGTCGGGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FCVEPIALPHLH*CGSVTAEVGGH Trigger: GTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS TCA 72 bp | TTCTCGTTCCAGGCGCCAAGCATCCCCTTCTACTTCTaGGTCGCTCTCTCCCACTACTTCAGGTTCCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: FSFQAPSIPFYF*VALSHYFRFHD Trigger: ATCGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS CAA 72 bp | GCCTCGTATTCTTCCTCGTCATTTTCATCATCAGTATaGAGCGCATCCAGGGCAGCAAGAGACCGCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASYSSSSFSSSV*SASRAARDRLF Trigger: GAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATACTGATGATGAAAATGACGAGGAAGAATACGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS TCA 72 bp | CCTCGTATTCTTCCTCGTCATTTTCATCATCAGTATTaGGCGCATCCAGGGCAGCAAGAGACCGCTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRILPRHFHHQY*AHPGQQETACS Trigger: AGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATACTGATGATGAAAATGACGAGGAAGAATACGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS CAA 72 bp | TTCTTGGTCTCTTCTTCTACAATCTTGAGGGTGTACTaGCGCCGCTCCTCAGCCATGCGTTTTGCTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLVSSSTILRVY*RRSSAMRFASC Trigger: ACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACCCTCAAGATTGTAGAAGAAGAGACCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS CAA 72 bp | TTCCGGACACATATCGTTTCACCTTCACCTTTTCCATaGAGATCTCACCTTTCTCGTTTCGAACTGGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: FRTHIVSPSPFP*RSHLSRFELGR Trigger: CCGTCCCAGTTCGAAACGAGAAAGGTGAGATCTCAATGGAAAAGGTGAAGGTGAAACGATATGTGTCCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS CAA 72 bp | GCAGCAAGAGACCGCTTGTTCTCCTCTAGCTCTTTCTaGGTCTCTTCTTCTACAATCTTGAGGGTGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: AARDRLFSSSSF*VSSSTILRVYL Trigger: CAAGTACACCCTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||
| CDS CAA 72 bp | TTGTATTTGCCTTTAACAGCTTTGTTGGTAATGACTTaGCCATTTGCCCGAAGTTCTGCCCGCCTTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLPLTALLVMT*PFARSSARLSS Trigger: GGAAGAAAGGCGGGCAGAACTTCGGGCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056732.4 |
||