Pregenerated sensors for MFAP1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068479Ensembl transcript IDs: ENSMUST00000089926.6
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTGTACACCAGGATGGTCTCAAACTCAGAGATTCACCTaGCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGCTCAACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLCTPGWSQTQRFT*LCLPSAGIKGVLNH Trigger: GTGGTTGAGCACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCTGGTGTACAGAGTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 90 bp | TACATCCTGGTAAATGCTCTGCCAACTGAGGGACACTCCCACCTCTaGCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCC | + |
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Preference number: 1 (lower is better) Translates to: YILVNALPTEGHSHL*PPSTALTHILKRLP Trigger: GGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTCAGTTGGCAGAGCATTTACCAGGATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR TCA 90 bp | CCTGGTGCAGGGATTAAAGGTGTCTGCCACCATGTCCACTTTGGATaGGTGAATTCTTCATTTTCCTGCTTCTACCTCCCAAGTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: PGAGIKGVCHHVHFG*VNSSFSCFYLPSVG Trigger: CCCAACACTTGGGAGGTAGAAGCAGGAAAATGAAGAATTCACTCATCCAAAGTGGACATGGTGGCAGACACCTTTAATCCCTGCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 90 bp | CTGTCTGAGACTATTTGGAGCTTGCTCAACTTGCATGCATTCCTGTaGTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: LSETIWSLLNLHAFL*LISNMAEKEQNSGL Trigger: AAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAATAGTCTCAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCACTCTGTACACCAGGATaGTCTCAAACTCAGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: LHGLTEFSTDSWGVLLSPLCTPG*SQTQRF Trigger: GAATCTCTGAGTTTGAGACCATCCTGGTGTACAGAG...TGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGTTCTGGTGTGGGGACTaGAGGCATGTGCTGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LNLHAFLCLISNMAEKEQFWCGD*RHVLLC Trigger: ACAGAGCAGCACATGCCTTCAGTCCCCACACCAGAA...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGATGGCTGGCCTGGAGTaGGAGATCTTCATAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LNLHAFLCLISNMAEKEQMAGLE*EIFIGP Trigger: GGGACCTATGAAGATCTCTCACTCCAGGCCAGCCAT...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATTATGGCCGCAAGTCTaGAAAGCTCTATACAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LHGLTEFSTDSWGVLLSPLWPQV*KALYKN Trigger: GTTCTTGTATAGAGCTTTCCAGACTTGCGGCCATAA...TGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR GCA 90 bp | TCAATACTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTGGGATTAAAGGTGTCTaGCACCATGTCCACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SILHGLTEFSTDSWGVLLGIKGV*HHVHFG Trigger: TCCAAAGTGGACATGGTGGCAGACACCTTTAATCCC...AAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAGTATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAAAGATCTGCCTGTCTCTaGCTCCTGGTGCAGGGATTA | + |
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Preference number: 2 (lower is better) Translates to: LCLISNMAEKEQNSGLLERSACL*LLVQGL Trigger: TAATCCCTGCACCAGGAGGCAGAGACAGGCAGATCT...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAGTCCCAAGTCAATGTaGGAAGCCAAGGTGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LNLHAFLCLISNMAEKEQSPKSM*EAKVRN Trigger: GTTTCTCACCTTGGCTTCCCACATTGACTTGGGACT...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATTAGTTCTCCTTCATCTGATGAAATGGAAAACAGGTTaGACTGAGCTTGGATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: STDSWGVLLSPLVLLHLMKWKTG*TELGFP Trigger: AGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTT...CATCAGATGAAGGAGAACTAATGGGCTAAGGAGCACTCCCCAGCTGTCAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATTAGTTCTCCTTCATATTCAACACCACAAATaGAAAACAGGTTGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: EFSTDSWGVLLSPLVLLHIQHHK*KTGWTE Trigger: CTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAAT...ATGAAGGAGAACTAATGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGTGCTGCTCTGTTCACTaGACTAGACTTTTGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PSQHSFNTHPEEITHTKKCCSVH*TRLLFL Trigger: TAGAAACAAAAGTCTAGTCCAGTGAACAGAGCAGCA...CTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 90 bp | TCTGAGACTATTTGGAGCTTGCTCAACTTGCATGCATTCCTGTGCTaGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SETIWSLLNLHAFLC*ISNMAEKEQNSGLL Trigger: TAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAATAGTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CACACACACCCACACACCAAAATGTATATTTATAAGATTCAACACCACAAATGGGGAGTGGTTTTAAGCTaGAAGCCTCTAGCCTACCCG | + |
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Preference number: 2 (lower is better) Translates to: HTHPHTKMYIYKIQHHKWGVVLS*KPLAYP Trigger: CGGGTAGGCTAGAGGCTTCCAGCTTAAAACCACTCC...CCATTTGTGGTGTTGAATCTTATAAATATACATTTTGGTGTGTGGGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | TTACTGTCATCAAGGAAAGTCACTCTGCTGATGGAATTTCATTCTGTGCATGGTGTTAGTGCTTTTCTGTaGGTTTCTCGGTATGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLSSRKVTLLMEFHSVHGVSAFL*VSRYES Trigger: GGACTCATACCGAGAAACCCACAGAAAAGCACTAAC...ACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 90 bp | ACTGAGTTATCTACTGCTATGTTCATCTATAGGATCAAACTCAGGTaGCTAAGACTTGTAGGCAGGGTTTCTCAACTTCAAGAACTGCGT | + |
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Preference number: 2 (lower is better) Translates to: TELSTAMFIYRIKLR*LRLVGRVSQLQELR Trigger: ACGCAGTTCTTGAAGTTGAGAAACCCTGCCTACAAGTCTTAGCAACCTGAGTTTGATCCTATAGATGAACATAGCAGTAGATAACTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGATCTGTTACAGTACTTaGCTAGTATATACAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LNLHAFLCLISNMAEKEQICYST*LVYTRS Trigger: GGACCTTGTATATACTAGGCAAGTACTGTAACAGAT...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAACCACCATGTCCACTTTaGATGAGTGAATTCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: LCLISNMAEKEQNSGLLEPPCPL*MSEFFI Trigger: AATGAAGAATTCACTCATCCAAAGTGGACATGGTGG...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 90 bp | AGTAGGCACTGGAACTCAGAGAGTCATGTCCTATTGTATAAGTCATaGTTGAACACAAGGCTAGAAGATAGAGAACAAAGACCACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SRHWNSESHVLLYKS*LNTRLEDREQRPPN Trigger: ATTTGGTGGTCTTTGTTCTCTATCTTCTAGCCTTGTGTTCAACAATGACTTATACAATAGGACATGACTCTCTGAGTTCCAGTGCCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 90 bp | AGGCACTGGAACTCAGAGAGTCATGTCCTATTGTATAAGTCATTGTaGAACACAAGGCTAGAAGATAGAGAACAAAGACCACCAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: RHWNSESHVLLYKSL*NTRLEDREQRPPNK Trigger: TTTATTTGGTGGTCTTTGTTCTCTATCTTCTAGCCTTGTGTTCAACAATGACTTATACAATAGGACATGACTCTCTGAGTTCCAGTGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 90 bp | GATAATCTGTTACAGTACTTGCCTAGTATATACAAGGTCCTAGACTaGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTATTACTATTA | + |
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Preference number: 2 (lower is better) Translates to: DNLLQYLPSIYKVLD*VPHFSGRNTSLLLL Trigger: TAATAGTAATAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGTCTAGGACCTTGTATATACTAGGCAAGTACTGTAACAGATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 72 bp | GACAGGGATGGCCTTAAACTCAGATCTGCCTGTCTCTaGCTCCTGGTGCAGGGATTAAAGGTGTCTGCCACC | + |
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Preference number: 3 (lower is better) Translates to: DRDGLKLRSACL*LLVQGLKVSAT Trigger: GGTGGCAGACACCTTTAATCCCTGCACCAGGAGGCAGAGACAGGCAGATCTGAGTTTAAGGCCATCCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 72 bp | TGTACACCAGGATGGTCTCAAACTCAGAGATTCACCTaGCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CTPGWSQTQRFT*LCLPSAGIKGV Trigger: CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTGAGACCATCCTGGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATTAGTTCTCCTTCATAATGGTTCAAGAGAATaGACCAGATCCCCTTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: EFSTDSWGVLLSPLVLLHNGSRE*TRSPCV Trigger: GACACAAGGGGATCTGGTCAATTCTCTTGAACCATT...ATGAAGGAGAACTAATGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGAAGTCAGATGTCAATTaGCTGGTTGCCAGACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: PSQHSFNTHPEEITHTKKKSDVN*LVARLS Trigger: ACTCAGTCTGGCAACCAGCAAATTGACATCTGACTT...CTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CCA 72 bp | ATACTACACGGGCTAACAGAGTTTAGTACTGACAGCTaGGGAGTGCTCCTTAGCCCATTAGTTCTCCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ILHGLTEFSTDS*GVLLSPLVLLH Trigger: ATGAAGGAGAACTAATGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAACAGGTTGGACTGAGCTaGGATTTCCTGATAGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LCLISNMAEKEQNSGLLEQVGLS*DFLIAY Trigger: GTAGGCTATCAGGAAATCCAAGCTCAGTCCAACCTG...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR TCA 72 bp | GGGATTAAAGGTGTCTGCCACCATGTCCACTTTGGATaGGTGAATTCTTCATTTTCCTGCTTCTACCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: GIKGVCHHVHFG*VNSSFSCFYLP Trigger: TGGGAGGTAGAAGCAGGAAAATGAAGAATTCACTCATCCAAAGTGGACATGGTGGCAGACACCTTTAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 72 bp | GGAACAGAACTCTGGTCTTCTAGAAGAGTAAGAAAGTaGCCTGAGCCACCTCTTCATCCCTTGTCTCATTTT | + |
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Preference number: 3 (lower is better) Translates to: GTELWSSRRVRK*PEPPLHPLSHF Trigger: AAAATGAGACAAGGGATGAAGAGGTGGCTCAGGGCACTTTCTTACTCTTCTAGAAGACCAGAGTTCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CAA 90 bp | TTACTGTCATCAAGGAAAGTCACTCTGCTGATGGAATTTCATTCTGTGCATGGTATTGACCAGATCCCCTaGTGTCCCACAGCTGGAATA | + |
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Preference number: 3 (lower is better) Translates to: LLSSRKVTLLMEFHSVHGIDQIP*CPTAGI Trigger: TATTCCAGCTGTGGGACACAAGGGGATCTGGTCAAT...ACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR TCA 72 bp | TTTGGAGCTTGCTCAACTTGCATGCATTCCTGTGCTTaGTTTCCAACATGGCAGAAAAGGAACAGAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: FGACSTCMHSCA*FPTWQKRNRTL Trigger: CAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CCA 72 bp | CTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTaGTCTTCTAGAAGAGTAAGAAAGTGCCCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LDFQHGRKGTEL*SSRRVRKCPEP Trigger: TGGCTCAGGGCACTTTCTTACTCTTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CCA 72 bp | ACTAAGAAGATGAAGCAGATGCTGTCTGAGACTATTTaGAGCTTGCTCAACTTGCATGCATTCCTGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TKKMKQMLSETI*SLLNLHAFLCL Trigger: CAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAATAGTCTCAGACAGCATCTGCTTCATCTTCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR-3UTR CAA 90 bp | TTACTGTCATCAAGGAAAGTCACTCTGCTGATGGAATTTCATTCTGTGCATGGTTCTACCTCCCAAGTGTaGGGATTACAGGTGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LLSSRKVTLLMEFHSVHGSTSQV*GLQVCV Trigger: TACACACACCTGTAATCCCAACACTTGGGAGGTAGA...ACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR TCA 72 bp | TCTCATTTTTACTGTCATCAAGGAAAGTCACTCTGCTaGTGGAATTTCATTCTGTGCATGGTGGTTATTACT | + |
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Preference number: 3 (lower is better) Translates to: SHFYCHQGKSLC*WNFILCMVVIT Trigger: AGTAATAACCACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAAAAATGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR GCA 72 bp | AGAATACATATGGAAGTCAGATGTCAATTTGCTGGTTaGCAGACTGAGTTATCTACTGCTATGTTCATCTAT | + |
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Preference number: 3 (lower is better) Translates to: RIHMEVRCQFAG*QTELSTAMFIY Trigger: ATAGATGAACATAGCAGTAGATAACTCAGTCTGGCAACCAGCAAATTGACATCTGACTTCCATATGTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGCCTCCTCTTCCTCACTaGTGTCTTCTCGTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QTQRFTCLCLPSAGIKGVPPLPH*CLLVPG Trigger: GCCTGGAACGAGAAGACAGCAGTGAGGAAGAGGAGG...CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGCTCGCTGACGCATCATaGCACGGCGCCGCTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: LNLHAFLCLISNMAEKEQLADAS*HGAAQF Trigger: AAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAG...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | TCTCTGCCTCCTGGTGCAGGGATTAAAGGTGTCTGCCACCATGTCCACTTTGGATACATCTCGTACCCCTaGTGCCTTTTGTTTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLPPGAGIKGVCHHVHFGYISYP*CLLFKE Trigger: TTCTTTAAACAAAAGGCAGCAGGGGTACGAGATGTA...TCCAAAGTGGACATGGTGGCAGACACCTTTAATCCCTGCACCAGGAGGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CTCAACTTGCATGCATTCCTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGATTTTTCCTCTCCTGTaGTCGCTGACGCATCATGCC | + |
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Preference number: 4 (lower is better) Translates to: LNLHAFLCLISNMAEKEQIFPLL*SLTHHA Trigger: GGCATGATGCGTCAGCGAGCACAGGAGAGGAAAAAT...CTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTCCTGATAGCCTAAATGACTTTGCCATTTaGCCGAAGTTCTGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: QHHKWKTGWTELGFPDSLNDFAI*PKFCPP Trigger: AGGCGGGCAGAACTTCGGGCAAATGGCAAAGTCATT...TAGGCTATCAGGAAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCACCAAAATTCTTGACCTaGATGACTTTAGGAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: LHGLTEFSTDSWGVLLSPPKFLT*MTLGRM Trigger: CATTCTTCCTAAAGTCATGCAGGTCAAGAATTTTGG...TGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | CAGATGCTGTCTGAGACTATTTGGAGCTTGCTCAACTaGCATGCATTCCTGTGCTTGATTTCCAACATGGCA | + |
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Preference number: 4 (lower is better) Translates to: QMLSETIWSLLN*HAFLCLISNMA Trigger: TGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAATAGTCTCAGACAGCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | AGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATTAGTTCTCCTTCATCTGATGATCTCGTACCCCTGCTaGCTTTTGTTTAAAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: STDSWGVLLSPLVLLHLMISYPC*LLFKEF Trigger: AAATTCTTTAAACAAAAGGCAGCAGGGGTACGAGAT...CATCAGATGAAGGAGAACTAATGGGCTAAGGAGCACTCCCCAGCTGTCAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | ACTGGTAGGAGCCTGGAAGATAATCTGTTACAGTACTaGCCTAGTATATACAAGGTCCTAGACTTGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TGRSLEDNLLQY*PSIYKVLDLVP Trigger: GGGAACCAAGTCTAGGACCTTGTATATACTAGGCAAGTACTGTAACAGATTATCTTCCAGGCTCCTACCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | AAGATGAAGCAGATGCTGTCTGAGACTATTTGGAGCTaGCTCAACTTGCATGCATTCCTGTGCTTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMKQMLSETIWS*LNLHAFLCLIS Trigger: GGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAATAGTCTCAGACAGCATCTGCTTCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | CAACCTCCTTACATAGTCACGAATAACCTTGAACTTTaGAGCCCCTTGCCTCCATTTCCCAAATGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPPYIVTNNLEL*SPLPPFPKCSE Trigger: TTCAGAGCATTTGGGAAATGGAGGCAAGGGGCTCAAAAGTTCAAGGTTATTCGTGACTATGTAAGGAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | ATTTGGAGCTTGCTCAACTTGCATGCATTCCTGTGCTaGATTTCCAACATGGCAGAAAAGGAACAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWSLLNLHAFLC*ISNMAEKEQNS Trigger: AGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAGGAATGCATGCAAGTTGAGCAAGCTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | ACTTGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTATTACTATTATCGTCATGCCGCTCCTCAGCCATaGGTTTTGCTTCTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWFPILVVGTQVYYYYRHAAPQP*VLLLVP Trigger: TGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGC...ATGACGATAATAGTAATAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | TACATAGTCACGAATAACCTTGAACTTTTGAGCCCCTaGCCTCCATTTCCCAAATGCTCTGAATCTATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YIVTNNLELLSP*PPFPKCSESIG Trigger: ACCTATAGATTCAGAGCATTTGGGAAATGGAGGCAAGGGGCTCAAAAGTTCAAGGTTATTCGTGACTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAACAGTCAGGTTTCTCATaGGTTCAATTTCTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLISNMAEKEQNSGLLEQSGFS*VQFLLS Trigger: AGAAAGCAGAAATTGAACGCATGAGAAACCTGACTG...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | TCTACTGCTATGTTCATCTATAGGATCAAACTCAGGTaGCTAAGACTTGTAGGCAGGGTTTCTCAACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STAMFIYRIKLR*LRLVGRVSQLQ Trigger: TTGAAGTTGAGAAACCCTGCCTACAAGTCTTAGCAACCTGAGTTTGATCCTATAGATGAACATAGCAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | TTACAGTACTTGCCTAGTATATACAAGGTCCTAGACTaGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQYLPSIYKVLD*VPHFSGRNTSL Trigger: TAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGTCTAGGACCTTGTATATACTAGGCAAGTACTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| 3UTR CAA 72 bp | TGGAACTCAGAGAGTCATGTCCTATTGTATAAGTCATaGTTGAACACAAGGCTAGAAGATAGAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNSESHVLLYKS*LNTRLEDREQR Trigger: TCTTTGTTCTCTATCTTCTAGCCTTGTGTTCAACAATGACTTATACAATAGGACATGACTCTCTGAGTTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR GCA 90 bp | ACTTGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTATTACTATTATCGTCATTTCCTTCTGTTTCAATaGTTCAGCTTCTCGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TWFPILVVGTQVYYYYRHFLLFQ*FSFSFL Trigger: CAAGAACGAGAAGCTGAAGCATTGAAACAGAAGGAA...ATGACGATAATAGTAATAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS TCA 90 bp | CCACGATCTTTCTGTGTCGAGCCAATCGCTCTTCCACATCTTCACTaGTGCGGTTCTGTAACCGCCGAAGTCGGGGGTCACTGGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRSFCVEPIALPHLH*CGSVTAEVGGHWMS Trigger: ACTCATCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAAAGATCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGGTTCTGGGCACTCTCTaGGCCCCATGCAGAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QTQRFTCLCLPSAGIKGVVLGTL*APCRVK Trigger: TTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAAC...CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS TCA 90 bp | ACTGCTGTCTTCTCGTTCCAGGCGCCAAGCATCCCCTTCTACTTCTaGGTCGCTCTCTCCCACTACTTCAGGTTCCACGATCTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAVFSFQAPSIPFYF*VALSHYFRFHDLSV Trigger: CACAGAAAGATCGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAAGACAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGCCTCAGCCATGCGTTTaGCTTCTTGTTCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTQRFTCLCLPSAGIKGVPQPCV*LLVPVP Trigger: AGGAACTGGAACAAGAAGCAAAACGCATGGCTGAGG...CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTAGCCCATCTTCTCTCTCCCTCTaGATTCTTTTGAGCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHGLTEFSTDSWGVLLSPSSLSL*ILLSSR Trigger: CCGCGAGCTCAAAAGAATCAAGAGGGAGAGAGAAGA...TGGGCTAAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGACAAGGTGGGTGTACTaGGTGCGACCAGACCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSQHSFNTHPEEITHTKKTRWVY*VRPDRP Trigger: TGGACGGTCTGGTCGCACCAAGTACACCCACCTTGT...CTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | GAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGTCCTCTAGCTCTTTCTaGGTCTCTTCTTCTACAATC | + |
|
Preference number: 5 (lower is better) Translates to: EGHSHLCPPSTALTHILKSSSSF*VSSSTI Trigger: GATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGA...CTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | GAGGGACACTCCCACCTCTGCCCTCCCAGCACAGCTTTAACACACATCCTGAAGTTGCCTTTAACAGCTTaGTTGGTAATGACTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGHSHLCPPSTALTHILKLPLTA*LVMTLP Trigger: TGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAA...CTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGGCAGAGGTGGGAGTGTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS TCA 90 bp | GCTTGTTCTCCTCTAGCTCTTTCTTGGTCTCTTCTTCTACAATCTTaGGGGTGTACTTGCGCCGCTCCTCAGCCATGCGTTTTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ACSPLALSWSLLLQS*GCTCAAPQPCVLLL Trigger: AAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACCCTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS TCA 90 bp | CTTTCCATGCCTCGTATTCTTCCTCGTCATTTTCATCATCAGTATTaGGCGCATCCAGGGCAGCAAGAGACCGCTTGTTCTCCTCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSMPRILPRHFHHQY*AHPGQQETACSPLA Trigger: AGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATACTGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAGCACAGCTTTAACACACATCCTGAAGAGATTACCCACACTAAGAAGTTTTCATCATCAGTATaGAGCGCATCCAGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSQHSFNTHPEEITHTKKFSSSV*SASRAA Trigger: TGCTGCCCTGGATGCGCTCAATACTGATGATGAAAA...CTTCTTAGTGTGGGTAATCTCTTCAGGATGTGTGTTAAAGCTGTGCTGGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CAAACTCAGAGATTCACCTGCCTCTGCCTCCCCAGTGCAGGGATTAAAGGTGTGCCTTTAACAGCTTTGTaGGTAATGACTTTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QTQRFTCLCLPSAGIKGVPLTAL*VMTLPF Trigger: AAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGG...CACACCTTTAATCCCTGCACTGGGGAGGCAGAGGCAGGTGAATCTCTGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | ATTTATAAGATTCAACACCACAAATGGAAAACAGGTTGGACTGAGCTTGGATTTATCTTGAGGGTGTACTaGCGCCGCTCCTCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IYKIQHHKWKTGWTELGFILRVY*RRSSAM Trigger: CATGGCTGAGGAGCGGCGCAAGTACACCCTCAAGAT...AAATCCAAGCTCAGTCCAACCTGTTTTCCATTTGTGGTGTTGAATCTTATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | TCAATACTACACGGGCTAACAGAGTTTAGTACTGACAGCTGGGGAGTGCTCCTTGGAAGAATGGTTTTGTaGAAATGGTCCTCAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SILHGLTEFSTDSWGVLLGRMVL*KWSSRV Trigger: TACTCTTGAGGACCATTTCAACAAAACCATTCTTCC...AAGGAGCACTCCCCAGCTGTCAGTACTAAACTCTGTTAGCCCGTGTAGTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAACCTTCACCTTTTCCATaGAGATCTCACCTTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LCLISNMAEKEQNSGLLEPSPFP*RSHLSR Trigger: ACGAGAAAGGTGAGATCTCAATGGAAAAGGTGAAGG...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | TTACTGTCATCAAGGAAAGTCACTCTGCTGATGGAATTTCATTCTGTGCATGGTTCCCTCTTGATTCTTTaGAGCTCGCGGACTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSRKVTLLMEFHSVHGSLLIL*SSRTFH Trigger: ATGGAAAGTCCGCGAGCTCAAAAGAATCAAGAGGGA...ACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | TTACTGTCATCAAGGAAAGTCACTCTGCTGATGGAATTTCATTCTGTGCATGGTAAAGGAAGTGGTATCTaGATCCACAAGGTGGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSRKVTLLMEFHSVHGKGSGI*IHKVGV Trigger: TACACCCACCTTGTGGATCAAGATACCACTTCCTTT...ACCATGCACAGAATGAAATTCCATCAGCAGAGTGACTTTCCTTGATGACAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGATTTCCAACATGGCAGAAAAGGAACAGAACTCTGGTCTTCTAGAATTAGGAAGAATGGTTTaGTTGAAATGGTCCTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLISNMAEKEQNSGLLELGRMV*LKWSSR Trigger: TCTTGAGGACCATTTCAACAAAACCATTCTTCCTAA...TTCTAGAAGACCAGAGTTCTGTTCCTTTTCTGCCATGTTGGAAATCAAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | CACACACACCCACACACCAAAATGTATATTTATAAGATTCAACACCACAAATGGTTGTTGGTAATGACTTaGCCATTTGCCCGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHPHTKMYIYKIQHHKWLLVMT*PFARSS Trigger: AGAACTTCGGGCAAATGGCAAAGTCATTACCAACAA...CCATTTGTGGTGTTGAATCTTATAAATATACATTTTGGTGTGTGGGTGTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | ACTTGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTATTACTATTATCGTCATGACCGTCCAAAATTCTaGACCTGCATGACTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWFPILVVGTQVYYYYRHDRPKF*TCMTLG Trigger: TCCTAAAGTCATGCAGGTCAAGAATTTTGGACGGTC...ATGACGATAATAGTAATAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS-3UTR CAA 90 bp | ACTTGGTTCCCCATTTTAGTGGTAGGAACACAAGTTTATTACTATTATCGTCATTACCCCTGCTGCCTTTaGTTTAAAGAATTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TWFPILVVGTQVYYYYRHYPCCL*FKEFCV Trigger: AACACAAAATTCTTTAAACAAAAGGCAGCAGGGGTA...ATGACGATAATAGTAATAAACTTGTGTTCCTACCACTAAAATGGGGAACCAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS CAA 90 bp | GCATCCAGGGCAGCAAGAGACCGCTTGTTCTCCTCTAGCTCTTTCTaGGTCTCTTCTTCTACAATCTTGAGGGTGTACTTGCGCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRAARDRLFSSSSF*VSSSTILRVYLRRS Trigger: GGAGCGGCGCAAGTACACCCTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS GCA 72 bp | CTTCATTTTTCCTCTCCTGTGCTCGCTGACGCATCATaGCACGGCGCCGCTCAATTTCTTCATCGTCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LHFSSPVLADAS*HGAAQFLHRQS Trigger: AGATTGACGATGAAGAAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAGGAAAAATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS CAA 90 bp | TCTAGCTCTTTCTTGGTCTCTTCTTCTACAATCTTGAGGGTGTACTaGCGCCGCTCCTCAGCCATGCGTTTTGCTTCTTGTTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFLVSSSTILRVY*RRSSAMRFASCSSS Trigger: GGAACTGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACCCTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS CAA 90 bp | ACTTTCCATGCCTCGTATTCTTCCTCGTCATTTTCATCATCAGTATaGAGCGCATCCAGGGCAGCAAGAGACCGCTTGTTCTCCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TFHASYSSSSFSSSV*SASRAARDRLFSSS Trigger: GCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATACTGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS CAA 90 bp | TTTTCATCATCAGTATTGAGCGCATCCAGGGCAGCAAGAGACCGCTaGTTCTCCTCTAGCTCTTTCTTGGTCTCTTCTTCTACAATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSSVLSASRAARDR*FSSSSFLVSSSTIL Trigger: CAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATACTGATGATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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| CDS CAA 90 bp | TGTAGAAACTTGTATTTGCCTTTAACAGCTTTGTTGGTAATGACTTaGCCATTTGCCCGAAGTTCTGCCCGCCTTTCTTCCTCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRNLYLPLTALLVMT*PFARSSARLSSSVR Trigger: CCTGACTGAGGAAGAAAGGCGGGCAGAACTTCGGGCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089926.6 |
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