Pregenerated sensors for MEX3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037253Ensembl transcript IDs: ENSMUST00000091852.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGGCAATGGGTAGGAATTCACAATCAAAGACAACTGTATTCCTaGTCCACTGAACATACCAGCCTTGAGCACTCTGGGCGAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: ERQWVGIHNQRQLYS*STEHTSLEHSGRDE Trigger: CTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAATTCCTACCCATTGCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 90 bp | CCCATCCTGAAATGGGAAAACCCAGGCGGCCATTTCCACATTCACTaGGAGAGGCAATGGGTAGGAATTCACAATCAAAGACAACTGTAT | + |
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Preference number: 1 (lower is better) Translates to: PILKWENPGGHFHIH*ERQWVGIHNQRQLY Trigger: ATACAGTTGTCTTTGATTGTGAATTCCTACCCATTGCCTCTCTCAGTGAATGTGGAAATGGCCGCCTGGGTTTTCCCATTTCAGGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR GCA 90 bp | TGGCTTATTAGTTGCAGTGTACGATGCAACAAAATAGGAAACACATaGTTGGTGGCATTCGTCCATATCTACAAGACGGCAGCTAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: WLISCSVRCNKIGNT*LVAFVHIYKTAARD Trigger: ATCTCTAGCTGCCGTCTTGTAGATATGGACGAATGCCACCAAGCATGTGTTTCCTATTTTGTTGCATCGTACACTGCAACTAATAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 90 bp | GAGATGAGAGTCAATGTAGCAGTTTTTGTCCCAAATTATAACCAGTaGTCTAGTAAACTGCCATCAGCCCTATTATTACTAGTAAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: EMRVNVAVFVPNYNQ*SSKLPSALLLLVSN Trigger: ATTACTTACTAGTAATAATAGGGCTGATGGCAGTTTACTAGATCACTGGTTATAATTTGGGACAAAAACTGCTACATTGACTCTCATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAGAAGTGTCAGTCATCTaGGATGCCAGGCACCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: MFCPFHTSKFGDILRMTLEVSVI*DARHPP Trigger: TGGAGGGTGCCTGGCATCTCAGATGACTGACACTTC...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR CAA 90 bp | ACAATCAAAGACAACTGTATTCCTGATCCACTGAACATACCAGCCTaGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: TIKDNCIPDPLNIPA*STLGEMRVNVAVFV Trigger: GACAAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTATTCAGCCAATATAGGTaGTTCCAAAAGCCCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: MFCPFHTSKFGDILRMTLFSQYR*FQKPIL Trigger: CAGGATGGGCTTTTGGAAGCACCTATATTGGCTGAA...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTATGTTTTTGTCAAAACTaGCAGTGTGAAGAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: MFCPFHTSKFGDILRMTLCFCQN*QCEEGS Trigger: GCTGCCTTCTTCACACTGCCAGTTTTGACAAAAACA...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR GCA 72 bp | CTGATTGGAGGTTGTCACAGCTGCTTTCATGAATCATaGCAAGGGCATTATTATCTCCCTCCCCATCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LIGGCHSCFHES*QGHYYLPPHPL Trigger: TAGGGGATGGGGAGGGAGATAATAATGCCCTTGGCATGATTCATGAAAGCAGCTGTGACAACCTCCAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 72 bp | TGGGTAGGAATTCACAATCAAAGACAACTGTATTCCTaGTCCACTGAACATACCAGCCTTGAGCACTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: WVGIHNQRQLYS*STEHTSLEHSG Trigger: CCCAGAGTGCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAATTCCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 72 bp | AAATGGGAAAACCCAGGCGGCCATTTCCACATTCACTaGGAGAGGCAATGGGTAGGAATTCACAATCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KWENPGGHFHIH*ERQWVGIHNQR Trigger: TCTTTGATTGTGAATTCCTACCCATTGCCTCTCTCAGTGAATGTGGAAATGGCCGCCTGGGTTTTCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR-3UTR CAA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTTCAGATGGATACATTTaGCTCTTAGGTTACACAGCC | + |
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Preference number: 3 (lower is better) Translates to: NIPALSTLGEMRVNVAVFSDGYI*LLGYTA Trigger: GGCTGTGTAACCTAAGAGCAAAATGTATCCATCTGA...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 72 bp | TCTACAAGACGGCAGCTAGAGATTAGGATTCAATACTaGCAATCAACTATCCTACAAGCAGTTAGCATTACA | + |
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Preference number: 3 (lower is better) Translates to: STRRQLEIRIQY*QSTILQAVSIT Trigger: TGTAATGCTAACTGCTTGTAGGATAGTTGATTGTCAGTATTGAATCCTAATCTCTAGCTGCCGTCTTGTAGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR CCA 72 bp | CACTATAATGTTTTGTCCTTTCCATACCAGCAAATTTaGGGACATACTGAGGATGACGTTAAAACATCCACA | + |
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Preference number: 3 (lower is better) Translates to: HYNVLSFPYQQI*GHTEDDVKTST Trigger: TGTGGATGTTTTAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACATTATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR TCA 72 bp | GTCAATGTAGCAGTTTTTGTCCCAAATTATAACCAGTaGTCTAGTAAACTGCCATCAGCCCTATTATTACTA | + |
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Preference number: 3 (lower is better) Translates to: VNVAVFVPNYNQ*SSKLPSALLLL Trigger: TAGTAATAATAGGGCTGATGGCAGTTTACTAGATCACTGGTTATAATTTGGGACAAAAACTGCTACATTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACACCGCCCGGGATCGGCTaGGTCTGGGAGGCGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTPPGIG*VWEAVA Trigger: GGCCACCGCCTCCCAGACTCAGCCGATCCCGGGCGG...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAGAGTCTGGGAGGCGGTaGCCGCGGGCGGCGACAACA | + |
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Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLESGRR*PRAATT Trigger: TGTTGTCGCCGCCCGCGGCCACCGCCTCCCAGACTC...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTACTCAGCAGGGCCGCTTaGTCTCCGTTCAGGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLLSRAA*SPFRAA Trigger: TGCCGCCCTGAACGGAGAGCAAGCGGCCCTGCTGAG...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAGCCGCCATCATGCCCTaGGCATCGTCCCCTCCGTAC | + |
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Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLAAIMP*ASSPPY Trigger: GTACGGAGGGGACGATGCCCAGGGCATGATGGCGGC...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACGCATCGCCGCCATCATaGCCTGGGCATCGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNASPPS*PGHRPL Trigger: GAGGGGACGATGCCCAGGGCATGATGGCGGCGATGC...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTCGGCTTGGAGGAACTaGATTGGAAGAGAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: EHTSLEHSGRDESQCSSFSAWRN*IGREPC Trigger: GCATGGCTCTCTTCCAATCCAGTTCCTCCAAGCCGA...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTCACCCTTCGAGCAAGTaGGTGTTCTATGCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NIPALSTLGEMRVNVAVFHPSSK*VFYALR Trigger: CCTGAGAGCATAGAACACCCACTTGCTCGAAGGGTG...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR CAA 72 bp | GACAACTGTATTCCTGATCCACTGAACATACCAGCCTaGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: DNCIPDPLNIPA*STLGEMRVNVA Trigger: TGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TGGTGGCATTCGTCCATATCTACAAGACGGCAGCTAGAGATTAGGATTCAATACTTTCGGGCATCCCTGTaGCTTCAAAGACTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WWHSSISTRRQLEIRIQYFRASL*LQRLAP Trigger: AGGAGCCAGTCTTTGAAGTCACAGGGATGCCCGAAA...GTATTGAATCCTAATCTCTAGCTGCCGTCTTGTAGATATGGACGAATGCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | TTCACAATCAAAGACAACTGTATTCCTGATCCACTGAACATACCAGCCTTGAGCGTTGCCTGTACTAGGTaGGTCACTCCTCACCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FTIKDNCIPDPLNIPALSVACTR*VTPHPS Trigger: CGAAGGGTGAGGAGTGACCCACCTAGTACAGGCAAC...GCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTATTGGAAGGCCAACATaGTTGCCTGTACTAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NIPALSTLGEMRVNVAVFIGRPT*LPVLGG Trigger: CCCACCTAGTACAGGCAACCATGTTGGCCTTCCAAT...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACCGCACTCGGTGGTGTTaGCGCTCTTCCTTCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNRTRWC*RSSFSA Trigger: TGCTGAGAAGGAAGAGCGTCAACACCACCGAGTGCG...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTAGCAGGGATGTATATTaGAAGGCCAACATGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: NIPALSTLGEMRVNVAVFSRDVY*KANMVA Trigger: GGCAACCATGTTGGCCTTCCAATATACATCCCTGCT...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTGGAGTCCAGATAGTTTaGGCAGATGTTGGTAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NIPALSTLGEMRVNVAVFGVQIV*ADVGKE Trigger: CTCTTTACCAACATCTGCTCAAACTATCTGGACTCC...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAAGACAGACGAGGAGTTaGTGGCTGACTTCCTCTACG | + |
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Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLRQTRS*WLTSST Trigger: CGTAGAGGAAGTCAGCCATCAACTCCTCGTCTGTCT...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACACTGGCAAACTGGACATaGCGGCGTTCTCTTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTLANWT*RRSLFT Trigger: TGTGAAAAGAGAACGCCGTCATGTCCAGTTTGCCAG...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTAGTTTCCGGTACGCATaGCGATATGCATTTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: EHTSLEHSGRDESQCSSFSFRYA*RYAFLS Trigger: AGATAGAAATGCATATCGCCATGCGTACCGGAAACT...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR CAA 72 bp | TGCAGTGTACGATGCAACAAAATAGGAAACACATGCTaGGTGGCATTCGTCCATATCTACAAGACGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CSVRCNKIGNTC*VAFVHIYKTAA Trigger: AGCTGCCGTCTTGTAGATATGGACGAATGCCACCAAGCATGTGTTTCCTATTTTGTTGCATCGTACACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TTCACAATCAAAGACAACTGTATTCCTGATCCACTGAACATACCAGCCTTGAGCACTTGGACTGTGGTTTaGCCAGGCAGATTAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: FTIKDNCIPDPLNIPALSTWTVV*PGRLGL Trigger: TAGTCCTAATCTGCCTGGTCAAACCACAGTCCAAGT...GCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTCAAATCACACAGTCGTaGTTTCTTCTTGATTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EHTSLEHSGRDESQCSSFQITQS*FLLDSG Trigger: TCCAGAATCAAGAAGAAAGCACGACTGTGTGATTTG...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACACCCAAAGCCAGAGAGTaGGTTAACTGGTTCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTPKARE*VNWFKW Trigger: CCATTTGAACCAGTTAACCCACTCTCTGGCTTTGGG...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| 3UTR CAA 72 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTaGCTCTTAGGTTACACAGCCAAGTACAACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYI*LLGYTAKYNFH Trigger: GTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTTGTCTTGGCTCTCAGTaGTTTAATTTTACAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: NIPALSTLGEMRVNVAVFCLGSQ*FNFTTL Trigger: CAGGGTTGTAAAATTAAAGCACTGAGAGCCAAGACA...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | TGGTGGCATTCGTCCATATCTACAAGACGGCAGCTAGAGATTAGGATTCAATACGTACGCATGGCGATATaGATTTCTATCTCTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: WWHSSISTRRQLEIRIQYVRMAI*ISISSR Trigger: ACGAGAAGAGATAGAAATGCATATCGCCATGCGTAC...GTATTGAATCCTAATCTCTAGCTGCCGTCTTGTAGATATGGACGAATGCCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACACAAAATAGGAATCAGTaGAGCCACTTCCTAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTQNRNQ*SHFLES Trigger: GCTCTCTAGGAAGTGGCTCCACTGATTCCTATTTTG...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACAAGGTGGAACCACCATTaGAAGAGGAGTAACTATTGG | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTRWNHH*KRSNYW Trigger: CCAATAGTTACTCCTCTTCCAATGGTGGTTCCACCT...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACACTTCTTTCCGTCCAGTaGCAACAAAAATGGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WDPLTTISDGYILLLGYTLLSVQ*QQKWVL Trigger: AAGAACCCATTTTTGTTGTCACTGGACGGAAAGAAG...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | TTCACAATCAAAGACAACTGTATTCCTGATCCACTGAACATACCAGCCTTGAGCGTGTGGGTCTGTTGCTaGATTCTCTTAATTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FTIKDNCIPDPLNIPALSVWVCC*ILLIVA Trigger: AGCAACAATTAAGAGAATTCAGCAACAGACCCACAC...GCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACATGCAGAGCCAAGAGTaGCACCTTCAAAGCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNMQSQE*HLQSSH Trigger: ATGTGAGCTTTGAAGGTGGCACTCTTGGCTCTGCAT...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAAGTCAGCTAGCCTATTaGTCCCAAAATAGGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLSQLAY*SQNRNQ Trigger: CTGATTCCTATTTTGGGAGCAATAGGCTAGCTGACT...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGTGTGACTTCAAAGACTaGCTCCTTATCTCTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMCDFKD*LLISAR Trigger: CCGAGCAGAGATAAGGAGCCAGTCTTTGAAGTCACA...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGCATTCTTGCTCGGCTTaGAGGAACTGGATTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMHSCSA*RNWIGR Trigger: TCTTCCAATCCAGTTCCTCCAAGCCGAGCAAGAATG...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACAGAGAGTGGGTTAACTaGTTCAAATGGAGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNREWVN*FKWSPD Trigger: ATCTGGACTCCATTTGAACCAGTTAACCCACTCTCT...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGCACGAACAGGTGTCTTaGTATACGTGTTTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMHEQVS*YTCLSW Trigger: CCAAGACAAACACGTATATCAAGACACCTGTTCGTG...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAAATTCTCTTAATTGTTaGTCCTTTTGGTCCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFCPFHTSKFGDILRMTLNSLNC*SFWSNH Trigger: GTGGTTGGACCAAAAGGAGCAACAATTAAGAGAATT...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACGTTAACTGGTTCAAATaGAGTCCAGATAGTTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNVNWFK*SPDSLS Trigger: GCTCAAACTATCTGGACTCCATTTGAACCAGTTAAC...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR TCA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACAATCATTTTCTTCATTaGGCTCTATGTAGTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DGYILLLGYTAKYNFHFNNHFLH*ALCSFR Trigger: CCGGAAACTACATAGAGCTCAATGAAGAAAATGATT...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGTTCTATCTCTTCTCGTaGTCGATCAACATTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMFYLFS*SINIFG Trigger: CCCGAAAATGTTGATCGAGCACGAGAAGAGATAGAA...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR GCA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGAGAGTGAATTTGGATTaGCTGAGTAACAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMRVNLD*LSNSCL Trigger: CAGACAGCTGTTACTCAGGCAATCCAAATTCACTCT...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 90 bp | CCGACCCCAGGGGCCCGCCCGGGATCGGCTGAGTCTGGGAGGCGGTaGCCGCGGGCGGCGACAACAGCAGCAGCGACGGCCGGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTPGARPGSAESGRR*PRAATTAAATAGPP Trigger: AGGAGGACCGGCCGTCGCTGCTGCTGTTGTCGCCGCCCGCGGCCACCGCCTCCCAGACTCAGCCGATCCCGGGCGGGCCCCTGGGGTCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | CGCCGCCATCATGCCCTGGGCATCGTCCCCTCCGTACAGCACCCCTaGCGCCGCGGCCTCCCGGGCATCGAAGCCCGCGGCCGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRHHALGIVPSVQHP*RRGLPGIEARGRQQ Trigger: CTGCTGCCGGCCGCGGGCTTCGATGCCCGGGAGGCCGCGGCGGCAGGGGTGCTGTACGGAGGGGACGATGCCCAGGGCATGATGGCGGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | ACGCACTCGGTGGTGTTGACGCTCTTCCTTCTCAGCAGGGCCGCTTaGTCTCCGTTCAGGGCGGCAGCGGCGGCCCCGCCGCCGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: THSVVLTLFLLSRAA*SPFRAAAAAPPPPG Trigger: CCCCGGCGGCGGCGGGGCCGCCGCTGCCGCCCTGAACGGAGAGCAAGCGGCCCTGCTGAGAAGGAAGAGCGTCAACACCACCGAGTGCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | CGCGGGCGGCGACAACAGCAGCAGCGACGGCCGGTCCTCCTCCTCTaGCTCCTCCAGCTCCTCCTCCTCCAGCAGTTCTCCGTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGRRQQQQRRPVLLL*LLQLLLLQQFSVQL Trigger: GAGCTGGACGGAGAACTGCTGGAGGAGGAGGAGCTGGAGGAGGCAGAGGAGGAGGACCGGCCGTCGCTGCTGCTGTTGTCGCCGCCCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | TGGGACCCACTGACTACAATCTCAGATGGATACATTTTGCTCTTAGGTTACACATCTCAGCAGGGCCGCTaGCTCTCCGTTCAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WDPLTTISDGYILLLGYTSQQGR*LSVQGG Trigger: GCCGCCCTGAACGGAGAGCAAGCGGCCCTGCTGAGA...TGTGTAACCTAAGAGCAAAATGTATCCATCTGAGATTGTAGTCAGTGGGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | CATCATTCTTGCTCGGCTTGGAGGAACTGGATTGGAAGAGAGCCATaGAGAGCCAAGAGTGCCACCTTCAAAGCTCACATCGGTACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HHSCSAWRNWIGREP*RAKSATFKAHIGTV Trigger: AACGGTACCGATGTGAGCTTTGAAGGTGGCACTCTTGGCTCTGCATGGCTCTCTTCCAATCCAGTTCCTCCAAGCCGAGCAAGAATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 90 bp | ATGGTTGCCTGTACTAGGTGGGTCACTCCTCACCCTTCGAGCAAGTaGGTGTTCTATGCTCTCAGGAAATGTAGGAGACAGACGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MVACTRWVTPHPSSK*VFYALRKCRRQTRS Trigger: ACTCCTCGTCTGTCTCCTACATTTCCTGAGAGCATAGAACACCCACTTGCTCGAAGGGTGAGGAGTGACCCACCTAGTACAGGCAACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 90 bp | AGCAGGGATGTATATTGGAAGGCCAACATGGTTGCCTGTACTAGGTaGGTCACTCCTCACCCTTCGAGCAAGTGGGTGTTCTATGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVYWKANMVACTR*VTPHPSSKWVFYAL Trigger: GAGAGCATAGAACACCCACTTGCTCGAAGGGTGAGGAGTGACCCACCTAGTACAGGCAACCATGTTGGCCTTCCAATATACATCCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTACGCACTCGGTGGTGTaGACGCTCTTCCTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NIPALSTLGEMRVNVAVFTHSVV*TLFLLS Trigger: GCTGAGAAGGAAGAGCGTCAACACCACCGAGTGCGT...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTGGAAGGCCAACATGGTaGCCTGTACTAGGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EHTSLEHSGRDESQCSSFGRPTW*PVLGGS Trigger: TGACCCACCTAGTACAGGCAACCATGTTGGCCTTCC...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 90 bp | TGGGTGTTCTATGCTCTCAGGAAATGTAGGAGACAGACGAGGAGTTaGTGGCTGACTTCCTCTACGCTGAGTCTTCATGTTACCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WVFYALRKCRRQTRS*WLTSSTLSLHVTRR Trigger: CCTTCTGGTAACATGAAGACTCAGCGTAGAGGAAGTCAGCCATCAACTCCTCGTCTGTCTCCTACATTTCCTGAGAGCATAGAACACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | TGGTGGCATTCGTCCATATCTACAAGACGGCAGCTAGAGATTAGGATTCAATACATAGGGGACCCTGACTaGGACTGTGGTTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWHSSISTRRQLEIRIQYIGDPD*DCGLTR Trigger: CCTGGTCAAACCACAGTCCAAGTCAGGGTCCCCTAT...GTATTGAATCCTAATCTCTAGCTGCCGTCTTGTAGATATGGACGAATGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTCTTGGAGGAACTGGATaGGAAGAGAGCCATGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIPALSTLGEMRVNVAVFLGGTG*EESHAE Trigger: CTCTGCATGGCTCTCTTCCAATCCAGTTCCTCCAAG...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | GTAGTTTCCGGTACGCATGGCGATATGCATTTCTATCTCTTCTCGTaGTCGATCAACATTTTCGGGCATCCCTGTGACTTCAAAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVSGTHGDMHFYLFS*SINIFGHPCDFKDW Trigger: CCAGTCTTTGAAGTCACAGGGATGCCCGAAAATGTTGATCGAGCACGAGAAGAGATAGAAATGCATATCGCCATGCGTACCGGAAACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 90 bp | GTGAATTTGGATTGCCTGAGTAACAGCTGTCTGGCAAACTGGACATaGCGGCGTTCTCTTTTCACAGATCTTGTTGGCACATTCCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VNLDCLSNSCLANWT*RRSLFTDLVGTFHA Trigger: TGCATGGAATGTGCCAACAAGATCTGTGAAAAGAGAACGCCGTCATGTCCAGTTTGCCAGACAGCTGTTACTCAGGCAATCCAAATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTGAGAGGATTTCTCTTTaGGCCATGGCAACATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EHTSLEHSGRDESQCSSFERISL*AMATSS Trigger: AGAAGATGTTGCCATGGCCAAAAGAGAAATCCTCTC...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GAACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTAGTGCAGGACCATTTTaGTTTCGAGATGCACGAATC | + |
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Preference number: 5 (lower is better) Translates to: EHTSLEHSGRDESQCSSFSAGPF*FRDARI Trigger: GATTCGTGCATCTCGAAACAAAAATGGTCCTGCACT...AAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | TTCACAATCAAAGACAACTGTATTCCTGATCCACTGAACATACCAGCCTTGAGCGAGACAGACGAGGAGTaGATGGCTGACTTCCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: FTIKDNCIPDPLNIPALSETDEE*MADFLY Trigger: GTAGAGGAAGTCAGCCATCAACTCCTCGTCTGTCTC...GCTCAAGGCTGGTATGTTCAGTGGATCAGGAATACAGTTGTCTTTGATTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 90 bp | ACTAGGGCAGCAATAACTTCATTCTCAAAGCAAATCACACAGTCGTaGTTTCTTCTTGATTCTGGAGGTGAGCTAGAGGTGGAACCACCA | + |
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Preference number: 5 (lower is better) Translates to: TRAAITSFSKQITQS*FLLDSGGELEVEPP Trigger: TGGTGGTTCCACCTCTAGCTCACCTCCAGAATCAAGAAGAAAGCACGACTGTGTGATTTGCTTTGAGAATGAAGTTATTGCTGCCCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 90 bp | CTGAGTCTTCATGTTACCAGAAGGATCACTCCCAAAGCCAGAGAGTaGGTTAACTGGTTCAAATGGAGTCCAGATAGTTTGAGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLHVTRRITPKARE*VNWFKWSPDSLSRC Trigger: ACATCTGCTCAAACTATCTGGACTCCATTTGAACCAGTTAACCCACTCTCTGGCTTTGGGAGTGATCCTTCTGGTAACATGAAGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 90 bp | AGAGGAGTAACTATTGGTACCATTAGAAAAAGCAGGGATGTATATTaGAAGGCCAACATGGTTGCCTGTACTAGGTGGGTCACTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGVTIGTIRKSRDVY*KANMVACTRWVTPH Trigger: GTGAGGAGTGACCCACCTAGTACAGGCAACCATGTTGGCCTTCCAATATACATCCCTGCTTTTTCTAATGGTACCAATAGTTACTCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 90 bp | AAGCCAGAGAGTGGGTTAACTGGTTCAAATGGAGTCCAGATAGTTTaGGCAGATGTTGGTAAAGAGTCAAAGGCAGGAGAGTCTACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPESGLTGSNGVQIV*ADVGKESKAGESTV Trigger: TACAGTAGACTCTCCTGCCTTTGACTCTTTACCAACATCTGCTCAAACTATCTGGACTCCATTTGAACCAGTTAACCCACTCTCTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTTGTCCTTTCCATACCAGCAAATTTGGGGACATACTGAGGATGACGTTAAAGCAGGGATGTATATaGGAAGGCCAACATGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MFCPFHTSKFGDILRMTLKQGCI*EGQHGC Trigger: GCAACCATGTTGGCCTTCCAATATACATCCCTGCTT...TAACGTCATCCTCAGTATGTCCCCAAATTTGCTGGTATGGAAAGGACAAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | TGGTGGCATTCGTCCATATCTACAAGACGGCAGCTAGAGATTAGGATTCAATACTTTTCACAGATCTTGTaGGCACATTCCATGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WWHSSISTRRQLEIRIQYFSQIL*AHSMQK Trigger: CTTCTGCATGGAATGTGCCAACAAGATCTGTGAAAA...GTATTGAATCCTAATCTCTAGCTGCCGTCTTGTAGATATGGACGAATGCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | AACATACCAGCCTTGAGCACTCTGGGCGAGATGAGAGTCAATGTAGCAGTTTTTATATACGTGTTTGTCTaGGCTCTCAGTGCTTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: NIPALSTLGEMRVNVAVFIYVFV*ALSALI Trigger: AATTAAAGCACTGAGAGCCAAGACAAACACGTATAT...AAAAACTGCTACATTGACTCTCATCTCGCCCAGAGTGCTCAAGGCTGGTATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGGACTTGGACTGTGGTTaGACCAGGCAGATTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMDLDCG*TRQIRT Trigger: AGTCCTAATCTGCCTGGTCAAACCACAGTCCAAGTC...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GATGGATACATTTTGCTCTTAGGTTACACAGCCAAGTACAACTTCCACTTTAACGTACGTGTGGGTCTGTaGCTGAATTCTCTTAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGYILLLGYTAKYNFHFNVRVGL*LNSLNC Trigger: ACAATTAAGAGAATTCAGCAACAGACCCACACGTAC...GTTAAAGTGGAAGTTGTACTTGGCTGTGTAACCTAAGAGCAAAATGTATCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS-3UTR CAA 90 bp | GGGTACCATTATACCCATGCCTTTATGAGTCCATATAGAGATATAGTATTTATGCCACGAACAGGTGTCTaGATATACGTGTTTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYHYTHAFMSPYRDIVFMPRTGV*IYVFVL Trigger: CAAGACAAACACGTATATCAAGACACCTGTTCGTGG...CATAAATACTATATCTCTATATGGACTCATAAAGGCATGGGTATAATGGTACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | CATGCCCTGGGCATCGTCCCCTCCGTACAGCACCCCTaGCGCCGCGGCCTCCCGGGCATCGAAGCCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HALGIVPSVQHP*RRGLPGIEARG Trigger: GCCGCGGGCTTCGATGCCCGGGAGGCCGCGGCGGCAGGGGTGCTGTACGGAGGGGACGATGCCCAGGGCATG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | GTGGTGTTGACGCTCTTCCTTCTCAGCAGGGCCGCTTaGTCTCCGTTCAGGGCGGCAGCGGCGGCCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VVLTLFLLSRAA*SPFRAAAAAPP Trigger: CGGCGGGGCCGCCGCTGCCGCCCTGAACGGAGAGCAAGCGGCCCTGCTGAGAAGGAAGAGCGTCAACACCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | CGACAACAGCAGCAGCGACGGCCGGTCCTCCTCCTCTaGCTCCTCCAGCTCCTCCTCCTCCAGCAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQQQQRRPVLLL*LLQLLLLQQFS Trigger: GGAGAACTGCTGGAGGAGGAGGAGCTGGAGGAGGCAGAGGAGGAGGACCGGCCGTCGCTGCTGCTGTTGTCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 72 bp | GTATATTGGAAGGCCAACATGGTTGCCTGTACTAGGTaGGTCACTCCTCACCCTTCGAGCAAGTGGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VYWKANMVACTR*VTPHPSSKWVF Trigger: GAACACCCACTTGCTCGAAGGGTGAGGAGTGACCCACCTAGTACAGGCAACCATGTTGGCCTTCCAATATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 72 bp | TGTACTAGGTGGGTCACTCCTCACCCTTCGAGCAAGTaGGTGTTCTATGCTCTCAGGAAATGTAGGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: CTRWVTPHPSSK*VFYALRKCRRQ Trigger: CTGTCTCCTACATTTCCTGAGAGCATAGAACACCCACTTGCTCGAAGGGTGAGGAGTGACCCACCTAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 72 bp | GATTGCCTGAGTAACAGCTGTCTGGCAAACTGGACATaGCGGCGTTCTCTTTTCACAGATCTTGTTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: DCLSNSCLANWT*RRSLFTDLVGT Trigger: TGTGCCAACAAGATCTGTGAAAAGAGAACGCCGTCATGTCCAGTTTGCCAGACAGCTGTTACTCAGGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | GGTACGCATGGCGATATGCATTTCTATCTCTTCTCGTaGTCGATCAACATTTTCGGGCATCCCTGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTHGDMHFYLFS*SINIFGHPCDF Trigger: GAAGTCACAGGGATGCCCGAAAATGTTGATCGAGCACGAGAAGAGATAGAAATGCATATCGCCATGCGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CAA 90 bp | GGCAGATTAGGACTACACGATAACCCTCCTAGTGCAGGACCATTTTaGTTTCGAGATGCACGAATCATAGAAAAGTGCTCTGCAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRLGLHDNPPSAGPF*FRDARIIEKCSAAE Trigger: CTCGGCTGCAGAGCACTTTTCTATGATTCGTGCATCTCGAAACAAAAATGGTCCTGCACTAGGAGGGTTATCGTGTAGTCCTAATCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 72 bp | CTCTTTTGGCCATGGCAACATCTTCTTTCCGTCCAGTaGCAACAAAAATGGGTTCTTCACCACGAACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFWPWQHLLSVQ*QQKWVLHHEQV Trigger: CACCTGTTCGTGGTGAAGAACCCATTTTTGTTGTCACTGGACGGAAAGAAGATGTTGCCATGGCCAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 72 bp | TATGCTCTCAGGAAATGTAGGAGACAGACGAGGAGTTaGTGGCTGACTTCCTCTACGCTGAGTCTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: YALRKCRRQTRS*WLTSSTLSLHV Trigger: AACATGAAGACTCAGCGTAGAGGAAGTCAGCCATCAACTCCTCGTCTGTCTCCTACATTTCCTGAGAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CAA 72 bp | ATAGAAAAGTGCTCTGCAGCCGAGAGGATTTCTCTTTaGGCCATGGCAACATCTTCTTTCCGTCCAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: IEKCSAAERISL*AMATSSFRPVT Trigger: TGTCACTGGACGGAAAGAAGATGTTGCCATGGCCAAAAGAGAAATCCTCTCGGCTGCAGAGCACTTTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CAA 90 bp | GCACGAATCATAGAAAAGTGCTCTGCAGCCGAGAGGATTTCTCTTTaGGCCATGGCAACATCTTCTTTCCGTCCAGTGACAACAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: ARIIEKCSAAERISL*AMATSSFRPVTTKM Trigger: CATTTTTGTTGTCACTGGACGGAAAGAAGATGTTGCCATGGCCAAAAGAGAAATCCTCTCGGCTGCAGAGCACTTTTCTATGATTCGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | TTTGTTTCGAGATGCACGAATCATAGAAAAGTGCTCTaGAGCCGAGAGGATTTCTCTTTTGGCCATGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: FVSRCTNHRKVL*SREDFSFGHGN Trigger: GTTGCCATGGCCAAAAGAGAAATCCTCTCGGCTGCAGAGCACTTTTCTATGATTCGTGCATCTCGAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | GCTAGAACTATCATTGCGATAGTTAGACATCATTCTTaGTCGGCTTGGAGGAACTGGATTGGAAGAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ARTIIAIVRHHS*SAWRNWIGREP Trigger: TGGCTCTCTTCCAATCCAGTTCCTCCAAGCCGAGCAAGAATGATGTCTAACTATCGCAATGATAGTTCTAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CCA 72 bp | CATGTTACCAGAAGGATCACTCCCAAAGCCAGAGAGTaGGTTAACTGGTTCAAATGGAGTCCAGATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HVTRRITPKARE*VNWFKWSPDSL Trigger: CAAACTATCTGGACTCCATTTGAACCAGTTAACCCACTCTCTGGCTTTGGGAGTGATCCTTCTGGTAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS TCA 72 bp | AGTGGGTTAACTGGTTCAAATGGAGTCCAGATAGTTTaGGCAGATGTTGGTAAAGAGTCAAAGGCAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGLTGSNGVQIV*ADVGKESKAGE Trigger: CTCTCCTGCCTTTGACTCTTTACCAACATCTGCTCAAACTATCTGGACTCCATTTGAACCAGTTAACCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS CAA 72 bp | GGACTACACGATAACCCTCCTAGTGCAGGACCATTTTaGTTTCGAGATGCACGAATCATAGAAAAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLHDNPPSAGPF*FRDARIIEKCS Trigger: AGAGCACTTTTCTATGATTCGTGCATCTCGAAACAAAAATGGTCCTGCACTAGGAGGGTTATCGTGTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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| CDS GCA 72 bp | GCAATAACTTCATTCTCAAAGCAAATCACACAGTCGTaGTTTCTTCTTGATTCTGGAGGTGAGCTAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: AITSFSKQITQS*FLLDSGGELEV Trigger: CACCTCTAGCTCACCTCCAGAATCAAGAAGAAAGCACGACTGTGTGATTTGCTTTGAGAATGAAGTTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091852.5 |
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