Pregenerated sensors for MEX3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057706Ensembl transcript IDs: ENSMUST00000082237.7
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTCCTaGTGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTT | + |
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Preference number: 1 (lower is better) Translates to: FIEHAIQVVRRLQYS*CRDPGKFLCLKMTF Trigger: AAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAAAGGCTACAGTACTCCTaGTGCAGAGATCCTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LCSRTSAVGTHPQRETHKRLQYS*CRDPGK Trigger: CTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCT...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR CAA 90 bp | GTACAGAACTCCTGGCCCTTCCATGAACATTCAAAAAGGATCCACTaGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VQNSWPFHEHSKRIH*CSRTSAVGTHPQRE Trigger: TTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAAGTGGATCCTTTTTGAATGTTCATGGAAGGGCCAGGAGTTCTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR-3UTR CCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAGTGATGAGGGTGGGGTaGAAAGAGGTGGGCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLLMQRSWQVPLFKNDILVMRVG*KEVGTR Trigger: TCTGGTGCCCACCTCTTTCCACCCCACCCTCATCAC...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGATTATTTATAGAGCATaGAATTCAGGTGGTTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: SKVHLSSSNVTYIYINEWIIYRA*NSGGSE Trigger: CTCCGAACCACCTGAATTGCATGCTCTATAAATAAT...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR TCA 72 bp | GCACCAGAGGCGTCTGGGCAGGTAGACCCTAGGGAATaGGGGTCGAGAGAGGACCCTCCTTCCCTGCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: APEASGQVDPRE*GSREDPPSLQC Trigger: GCACTGCAGGGAAGGAGGGTCCTCTCTCGACCCTCATTCCCTAGGGTCTACCTGCCCAGACGCCTCTGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR-3UTR CAA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGTCAAAAAGGATCCACTaGTGTTCTAGAACGAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMSKRIH*CSRTSA Trigger: AGCGCTCGTTCTAGAACACAAGTGGATCCTTTTTGA...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR TCA 72 bp | CATGCAATTCAGGTGGTTCGGAGGCTACAGTACTCCTaGTGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: HAIQVVRRLQYS*CRDPGKFLCLK Trigger: TTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGAATTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | CAAGCTCCTCTGGGATCTCTGAGAGTGATGAGGGTGGGGTGGAAAGAGGTGGGCGCTCTCCCGCCCCCGTaGCCATGTGCAAGGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QAPLGSLRVMRVGWKEVGALPPP*PCARAE Trigger: CTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGC...GCCCACCTCTTTCCACCCCACCCTCATCACTCTCAGAGATCCCAGAGGAGCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTGGCGCGGGCAGCTGGTaGCCGGGTGCAGTCGACGGT | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPGAGSW*PGAVDG Trigger: ACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCC...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTGCTTGGGGTGGGCTTaGTCCAGAGGCTGCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPCLGWA*SRGCPA Trigger: GGCCGGGCAGCCTCTGGAGCAAGCCCACCCCAAGCA...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTCAGCTGGTGCCCGGGTaGAGTCGACGGTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPQLVPG*SRRCTS Trigger: GCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTG...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTCGCCGCCGCTGCCGTTaGGCTCCAGGTCTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPRRRCR*APGLQT Trigger: TGTTTGCAGACCTGGAGCGCAACGGCAGCGGCGGCG...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAACGGCGAGCAAGGTGGTaGTCTCCCGCCCCCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKRRARW*SPAPVA Trigger: GGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCG...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | ATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGGCCCCCGTGGCCATGTaGAAGGGCGGAGACAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: IYRACNSGGSEATVLLMQAPVAM*KGGDRR Trigger: GCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGC...CTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | CAAGCTCCTCTGGGATCTCTGAGAGTGATGAGGGTGGGGTGGAAAGAGGTGGGCCCACGTCTGTGCCATTaGCATGGAAGTCGTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QAPLGSLRVMRVGWKEVGPRLCH*HGSRSR Trigger: ACGAGAACGACTTCCATGCCAATGGCACAGACGTGG...GCCCACCTCTTTCCACCCCACCCTCATCACTCTCAGAGATCCCAGAGGAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAAGGGTGTCCCAGGTGGTaGGGCGGGAGCTGGGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKGCPRW*GGSWVE Trigger: TTCGACCCAGCTCCCGCCCCACCACCTGGGACACCC...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTATCTGGGGAAGGTACTaGGGCTTCCCCCGCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPIWGRY*GFPRCV Trigger: TACACAGCGGGGGAAGCCTCAGTACCTTCCCCAGAT...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTGTCGTTGCGATAGCTaGAGAAGGGCTTGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPCRCDS*RRACGQ Trigger: CTGGCCGCAAGCCCTTCTCCAGCTATCGCAACGACA...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGCAGCTGCGCTGCCGCTaGTCCCACCACCGAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMQLRCR*SHHRSK Trigger: CTTACTTCGGTGGTGGGACCAGCGGCAGCGCAGCTG...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAACCCAACAGGGAGAGCTaGTCGAGCGCAAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKPNRES*SSASCR Trigger: CCTGCAGCTTGCGCTCGATCAGCTCTCCCTGTTGGG...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | CAAGCTCCTCTGGGATCTCTGAGAGTGATGAGGGTGGGGTGGAAAGAGGTGGGCTCGCCCTCAAAGCTTTaGTTTTACAACCTTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QAPLGSLRVMRVGWKEVGSPSKL*FYNLAS Trigger: GGAGGCAAGGTTGTAAAATCAAAGCTTTGAGGGCGA...GCCCACCTCTTTCCACCCCACCCTCATCACTCTCAGAGATCCCAGAGGAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAAATAGTCCGCCAGGCGTaGAGTAGCAGCTGCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKIVRQA*SSSCAA Trigger: GGCAGCGCAGCTGCTACTTCACGCCTGGCGGACTAT...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTGCGGATGGCCTGAGTaGCCGCCGTGTGGCAGACGG | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYCGWPE*PPCGRR Trigger: CCGTCTGCCACACGGCGGTCACTCAGGCCATCCGCA...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGAAAATGCGGATGGCCTaGGTGACCGCCGTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMKMRMA*VTAVWQ Trigger: CTGCCACACGGCGGTCACTCAGGCCATCCGCATTTT...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTAGCTGGAGCTGTCGTTaGGATAGCTGGAGAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPSWSCR*DSWRRA Trigger: AGCCCTTCTCCAGCTATCGCAACGACAGCTCCAGCT...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAAAGTCGCGGCTGCCTTTaGGCCTCAGCCCAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKSRGCL*ASAQRK Trigger: CTTCCTCTGGGCTGAGGCGCAAAGGCAGCCGCGACT...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTCCCTACCACGCGGTATaGCACCCTCACTTGGATAGT | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPPYHAV*HPHLDS Trigger: ACTATCCAAGTGAGGGTGCCATACCGCGTGGTAGGG...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTAGTCACCTCGAAAACTaGCTCCTTGTCTCGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPSHLEN*LLVSAG Trigger: CCCAGCCGAGACAAGGAGCCAGTTTTCGAGGTGACT...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | TCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGAGATCCTGGCAAGTTCCTCGAAGTAAGAGTCTGTaGATGCGCTGCCAAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGSEATVLLMQRSWQVPRSKSL*MRCQAS Trigger: GCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCG...AGGAACTTGCCAGGATCTCTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAACATTGTGAGCAAAGCTaGGTGCAGGGCTGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKHCEQS*VQGWEG Trigger: GCCCTCCCAGCCCTGCACTCAGCTTTGCTCACAATG...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACCAGAGCAGTCGCGGCTaGCTTTGCGCCTCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYQSSRG*LCASAQ Trigger: CTGGGCTGAGGCGCAAAGGCAGCCGCGACTGCTCTG...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGGTAAGAGTCTGTGGATaGGCTGCCAAGCGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMVRVCG*AAKRAG Trigger: TCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTAC...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACCGACGTGTTCGGAACTaGGTACCGGCACGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYRRVRN*VPARTR Trigger: CCGAGTGCGTGCCGGTACCCAGTTCCGAACACGTCG...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACCCAGCAGCCCCAGATTaGCATTGGAGGGTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYPAAPD*HWRVCC Trigger: GCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGG...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACGCTGTTGAATGCGCTTaGTCGTGGCGCCCTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYAVECA*SWRPLD Trigger: GTCCAAAGGGCGCCACGATCAAGCGCATTCAACAGC...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACGTTGCGCTCCAGGTCTaGAAACAGCGAGCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYVALQV*KQRAGH Trigger: ATGCCCAGCTCGCTGTTTGCAGACCTGGAGCGCAAC...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAATGTTCACGCTCTTCTTaGGCGGTTCGCTGTCGTACA | + |
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Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKCSRSS*AVRCRT Trigger: TGTACGACAGCGAACCGCGCAAGAAGAGCGTGAACA...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACGGGTCGAAAGTAGGCTaGAGCTCAGGACCCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYGSKVG*SSGPPS Trigger: AGATGGGGGTCCTGAGCTGCAGCCTACTTTCGACCC...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAAAGGGGTGTCCCAGGTaGTGGGGCGGGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILKGCPR*WGGSWV Trigger: GACCCAGCTCCCGCCCCACCACCTGGGACACCCCTT...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGACAGGCGCGGGCAGCTaGTGCCCGGGTGCAGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWTGAGS*CPGAVD Trigger: GTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGT...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGACGCGGCGAGCAAGGTaGTGCTCTCCCGCCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWTRRAR*CSPAPV Trigger: CACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGT...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| 3UTR CAA 72 bp | TCCTGGCCCTTCCATGAACATTCAAAAAGGATCCACTaGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SWPFHEHSKRIH*CSRTSAVGTHP Trigger: TGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAAGTGGATCCTTTTTGAATGTTCATGGAAGGGCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR TCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAGACCCGCCGGACCCGTaGTGCAGATCAAAGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILDPPDP*CRSKPT Trigger: CGTGGGCTTTGATCTGCATCACGGGTCCGGCGGGTC...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR CCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTGTAGGAGTGATGCTTaGGGTGGGCTTGCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYCRSDA*GGLAPE Trigger: CTCTGGAGCAAGCCCACCCCAAGCATCACTCCTACA...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS-3UTR GCA 90 bp | CCGTTCCTATTATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACCGCTCTTCTCACAAATaGGGTTGGCACACTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLLFIEHAIQVVRRLQYRSSHK*GWHTPC Trigger: GCATGGAGTGTGCCAACCGCATTTGTGAGAAGAGCG...GTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAATAATAGGAACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGGCTCCTTGTCTCGGCTaGGTGTCACAATATATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMAPCLG*VSQYMY Trigger: ATACATATATTGTGACACCCAGCCGAGACAAGGAGC...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAGGAGAGCGCTCGAACTaGGCCCAGAGAAGGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILGERSN*AQRRGV Trigger: GACACCCCTTCTCTGGGCCCAGTTCGAGCGCTCTCC...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR TCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAGGACGACGAGGCAGATaGGGATGCCGAAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILGRRGR*GCRRRA Trigger: TGCTCTTCTTCGGCATCCTCATCTGCCTCGTCGTCC...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR GCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAAGTCTGTGGATGCGCTaGCAAGCGAGCTGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILSLWMR*QASWSC Trigger: ACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACT...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGCGCTGCCAAGCGAGCTaGAGCTGTCGTTGCGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWRCQAS*SCRCDS Trigger: GCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCG...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGTGCAGATCCACCTCCTaGAGAGCGCTCGAACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWCRSTS*RALELG Trigger: GCCCAGTTCGAGCGCTCTCCAGGAGGTGGATCTGCA...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAATGTAGGTGTAACCATTaGCGTTATTGTTGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSRTSAVGTHPQRETHKCRCNH*RYCCCS Trigger: GGAACAACAACAATAACGGCAATGGTTACACCTACA...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAAGCTGCAGGGCTCTTTaGTCATCCAGAGTCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILSCRAL*SSRVSP Trigger: GGGAGAGACTCTGGATGACCAAAGAGCCCTGCAGCT...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR GCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGGTGAGCAAAGCTGAGTaGAGGGCTGGGAGGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWVSKAE*RAGRAI Trigger: TATAGCCCTCCCAGCCCTGCACTCAGCTTTGCTCAC...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR TCA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTATTGTTGTTCCCATTGTaGGCAAAGCTGAGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLMQRSWQVPLFKNDILLLFPL*AKLSAG Trigger: CCCTGCACTCAGCTTTGCTCACAATGGGAACAACAA...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGTCTGTGCCATTGGCATaGAAGTCGTTCTCGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVHLSSSNVTYIYINEWSVPLA*KSFSSV Trigger: GACAGACGAGAACGACTTCCATGCCAATGGCACAGA...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| 3UTR CAA 72 bp | ATAGAAAATATGCTGGGTGAAGCAGATCTAGAAGATTaGTCTGAACCTATAAAATCTCCATCCCAACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IENMLGEADLED*SEPIKSPSQQN Trigger: ATTCTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACCCAGCATATTTTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | AGGCCTCCACCGCCCGGGTCGCTGCGCACGCGGCGAGCAAGGTGGTaGTCTCCCGCCCCCGTGGCCATGTGCAAGGGCGGAGACAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPPPGSLRTRRARW*SPAPVAMCKGGDRR Trigger: GCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCGCAGCGACCCGGGCGGTGGAGGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | GGTCGCTGCGCACGCGGCGAGCAAGGTGGTGCTCTCCCGCCCCCGTaGCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGCTGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRCARGEQGGALPPP*PCARAETGAGSWCP Trigger: CGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCGCAGCGACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | GCCAGGCCTCCACCGCCCGGGTCGCTGCGCACGCGGCGAGCAAGGTaGTGCTCTCCCGCCCCCGTGGCCATGTGCAAGGGCGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARPPPPGSLRTRRAR*CSPAPVAMCKGGDR Trigger: CCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCGCAGCGACCCGGGCGGTGGAGGCCTGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | CGCACGCGGCGAGCAAGGTGGTGCTCTCCCGCCCCCGTGGCCATGTaGAAGGGCGGAGACAGGCGCGGGCAGCTGGTGCCCGGGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RTRRARWCSPAPVAM*KGGDRRGQLVPGCS Trigger: ACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | CCGCCCCCGTGGCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGCTaGTGCCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPWPCARAETGAGS*CPGAVDGAPAAPDW Trigger: CCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | GGCGGAGACAGGCGCGGGCAGCTGGTGCCCGGGTGCAGTCGACGGTaGACCAGCAGCCCCAGATTGGCATTGGAGGGTGTGCTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGDRRGQLVPGCSRR*TSSPRLALEGVLLA Trigger: CGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | CCCCCGTGGCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGCTGGTaGCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPWPCARAETGAGSW*PGAVDGAPAAPDWH Trigger: ATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | GCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGCTGGTGCCCGGGTaGAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AMCKGGDRRGQLVPG*SRRCTSSPRLALEG Trigger: ACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | TGCCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATTaGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAGACCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPGAVDGAPAAPDWH*RVCCWRHPRERPQR Trigger: CCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | AGCTGGTGCCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTaGCATTGGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SWCPGAVDGAPAAPD*HWRVCCWRHPRERP Trigger: TGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | GTCGACGGTGCACCAGCAGCCCCAGATTGGCATTGGAGGGTGTGCTaGTGGCGCCACCCCCGGGAAAGACCACAGAGGACGACGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDGAPAAPDWHWRVC*WRHPRERPQRTTRQ Trigger: CTGCCTCGTCGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | GCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATTGGAGGGTGTaGTGCTGGCGCCACCCCCGGGAAAGACCACAGAGGACGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVDGAPAAPDWHWRV*CWRHPRERPQRTTR Trigger: CCTCGTCGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | GACGGTGCACCAGCAGCCCCAGATTGGCATTGGAGGGTGTGCTGCTaGCGCCACCCCCGGGAAAGACCACAGAGGACGACGAGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: DGAPAAPDWHWRVCC*RHPRERPQRTTRQM Trigger: CATCTGCCTCGTCGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 90 bp | AGCAAAGCTGAGTGCAGGGCTGGGAGGGCTATAGTCCGCCAGGCGTaGAGTAGCAGCTGCGCTGCCGCTGGTCCCACCACCGAAGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKAECRAGRAIVRQA*SSSCAAAGPTTEVR Trigger: TCTTACTTCGGTGGTGGGACCAGCGGCAGCGCAGCTGCTACTTCACGCCTGGCGGACTATAGCCCTCCCAGCCCTGCACTCAGCTTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | CGCTGCCGCTGGTCCCACCACCGAAGTAAGAGTCTGTGGATGCGCTaGCAAGCGAGCTGGAGCTGTCGTTGCGATAGCTGGAGAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRWSHHRSKSLWMR*QASWSCRCDSWRRA Trigger: AGCCCTTCTCCAGCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGACCAGCGGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 90 bp | GCTGGCGCCACCCCCGGGAAAGACCACAGAGGACGACGAGGCAGATaGGGATGCCGAAGAAGAGCAGGAAGAGGATACTGGTGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGATPGKDHRGRRGR*GCRRRAGRGYWCCR Trigger: TCTGCAGCACCAGTATCCTCTTCCTGCTCTTCTTCGGCATCCTCATCTGCCTCGTCGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 90 bp | AGCTGCGCTGCCGCTGGTCCCACCACCGAAGTAAGAGTCTGTGGATaGGCTGCCAAGCGAGCTGGAGCTGTCGTTGCGATAGCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCAAAGPTTEVRVCG*AAKRAGAVVAIAGE Trigger: TTCTCCAGCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGACCAGCGGCAGCGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | TCCCACCACCGAAGTAAGAGTCTGTGGATGCGCTGCCAAGCGAGCTaGAGCTGTCGTTGCGATAGCTGGAGAAGGGCTTGCGGCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHHRSKSLWMRCQAS*SCRCDSWRRACGQV Trigger: CACCTGGCCGCAAGCCCTTCTCCAGCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS CCA 90 bp | CGAAGAAGAGCAGGAAGAGGATACTGGTGCTGCAGATCCACCTCCTaGAGAGCGCTCGAACTGGGCCCAGAGAAGGGGTGTCCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRAGRGYWCCRSTS*RALELGPEKGCPRW Trigger: CCACCTGGGACACCCCTTCTCTGGGCCCAGTTCGAGCGCTCTCCAGGAGGTGGATCTGCAGCACCAGTATCCTCTTCCTGCTCTTCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCCTCTGGGATCTCTGAGAGTGATGAGGGTGGGGTGGAAAGAGGTGGGCGTATGGCACCCTCACTaGGATAGTGGTCTGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QAPLGSLRVMRVGWKEVGVWHPH*DSGLSR Trigger: CCGGGACAGACCACTATCCAAGTGAGGGTGCCATAC...GCCCACCTCTTTCCACCCCACCCTCATCACTCTCAGAGATCCCAGAGGAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCCTCTGGGATCTCTGAGAGTGATGAGGGTGGGGTGGAAAGAGGTGGGCCCCACGTCTGTGCCATaGGCATGGAAGTCGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QAPLGSLRVMRVGWKEVGPTSVP*AWKSFS Trigger: CGAGAACGACTTCCATGCCAATGGCACAGACGTGGG...GCCCACCTCTTTCCACCCCACCCTCATCACTCTCAGAGATCCCAGAGGAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS TCA 90 bp | TACAAAGAGGCGCCCTCATCACTGTCCAGTCCCAACAGGGAGAGCTaGTCGAGCGCAAGCTGCAGGGCTCTTTGGTCATCCAGAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YKEAPSSLSSPNRES*SSASCRALWSSRVS Trigger: AGAGACTCTGGATGACCAAAGAGCCCTGCAGCTTGCGCTCGATCAGCTCTCCCTGTTGGGACTGGACAGTGATGAGGGCGCCTCTTTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | ATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGCCGCCGCCGCTGCCGTaGCGCTCCAGGTCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IYRACNSGGSEATVLLMQPPPLP*RSRSAN Trigger: GTTTGCAGACCTGGAGCGCAACGGCAGCGGCGGCGG...CTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAAATGCTTGGGGTGGGCTaGCTCCAGAGGCTGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCSRTSAVGTHPQRETHKMLGVG*LQRLPG Trigger: GCCGGGCAGCCTCTGGAGCAAGCCCACCCCAAGCAT...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGACCAGCAGCCCCAGATaGGCATTGGAGGGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMTSSPR*ALEGVL Trigger: CAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGT...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGAAGCTGCAGGGCTCTTaGGTCATCCAGAGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMKLQGS*VIQSLS Trigger: GGAGAGACTCTGGATGACCAAAGAGCCCTGCAGCTT...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | AACTTTAATAAAGCTGCAGGGTCCTGGCTGTACAGAACTCCTGGCCCTTCCATGATGTTCACGCTCTTCTaGCGCGGTTCGCTGTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NFNKAAGSWLYRTPGPSMMFTLF*RGSLSY Trigger: GTACGACAGCGAACCGCGCAAGAAGAGCGTGAACAT...CATGGAAGGGCCAGGAGTTCTGTACAGCCAGGACCCTGCAGCTTTATTAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAACCGGGCACAGCTCCGTaGAGAGCCGTGTTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LCSRTSAVGTHPQRETHKPGTAP*RAVFLL Trigger: TAACAAGAACACGGCTCTCAACGGAGCTGTGCCCGG...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | ATTTATAGAGCATGCAATTCAGGTGGTTCGGAGGCTACAGTACTCCTGATGCAGTGTATGTGTCTGCTGTaGAATGCGCTTGATCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IYRACNSGGSEATVLLMQCMCLL*NALDRG Trigger: GCCACGATCAAGCGCATTCAACAGCAGACACATACA...CTGCATCAGGAGTACTGTAGCCTCCGAACCACCTGAATTGCATGCTCTATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | GTACTCCTGATGCAGAGATCCTGGCAAGTTCCTTTGTTTAAAAATGACATTTTAAGCCCCAGATTGGCATaGGAGGGTGTGCTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLLMQRSWQVPLFKNDILSPRLA*EGVLLA Trigger: CGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCT...TAAAATGTCATTTTTAAACAAAGGAACTTGCCAGGATCTCTGCATCAGGAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGTACATTTAAGCTCAAGTAACGTCACCTACATATACATAAACGAGTGGCAGTCGCGGCTGCCTTaGCGCCTCAGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKVHLSSSNVTYIYINEWQSRLP*RLSPEE Trigger: TTCCTCTGGGCTGAGGCGCAAAGGCAGCCGCGACTG...CCACTCGTTTATGTATATGTAGGTGACGTTACTTGAGCTTAAATGTACTTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTCTAGAACGAGCGCTGTAGGAACCCACCCACAAAGGGAAACACACAAATTCGCCCTCAAAGCTTaGATTTTACAACCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCSRTSAVGTHPQRETHKFALKA*ILQPCL Trigger: GAGGCAAGGTTGTAAAATCAAAGCTTTGAGGGCGAA...TTTGTGTGTTTCCCTTTGTGGGTGGGTTCCTACAGCGCTCGTTCTAGAACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
||
| CDS GCA 72 bp | CCGCCCGGGTCGCTGCGCACGCGGCGAGCAAGGTGGTaGTCTCCCGCCCCCGTGGCCATGTGCAAGGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPGSLRTRRARW*SPAPVAMCKGG Trigger: TCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCGCAGCGACCCGGGCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | CCACCGCCCGGGTCGCTGCGCACGCGGCGAGCAAGGTaGTGCTCTCCCGCCCCCGTGGCCATGTGCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PPPGSLRTRRAR*CSPAPVAMCKG Trigger: GCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGCGCAGCGACCCGGGCGGTGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | GCACGCGGCGAGCAAGGTGGTGCTCTCCCGCCCCCGTaGCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARGEQGGALPPP*PCARAETGAGS Trigger: GCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCGCCGCGTGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | CGAGCAAGGTGGTGCTCTCCCGCCCCCGTGGCCATGTaGAAGGGCGGAGACAGGCGCGGGCAGCTGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RARWCSPAPVAM*KGGDRRGQLVP Trigger: GGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCACGGGGGCGGGAGAGCACCACCTTGCTCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | TGGCCATGTGCAAGGGCGGAGACAGGCGCGGGCAGCTaGTGCCCGGGTGCAGTCGACGGTGCACCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WPCARAETGAGS*CPGAVDGAPAA Trigger: GGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTTGCACATGGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | AAGGGCGGAGACAGGCGCGGGCAGCTGGTGCCCGGGTaGAGTCGACGGTGCACCAGCAGCCCCAGATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: KGGDRRGQLVPG*SRRCTSSPRLA Trigger: TGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCTGTCTCCGCCCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | CCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTaGCATTGGAGGGTGTGCTGCTGGCGCCACCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PGAVDGAPAAPD*HWRVCCWRHPR Trigger: CCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | CCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATaGGCATTGGAGGGTGTGCTGCTGGCGCCACCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PGCSRRCTSSPR*ALEGVLLAPPP Trigger: CGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 90 bp | CAGCTGGTGCCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATaGGCATTGGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: QLVPGCSRRCTSSPR*ALEGVLLAPPPGKT Trigger: GGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | AGGCGCGGGCAGCTGGTGCCCGGGTGCAGTCGACGGTaGACCAGCAGCCCCAGATTGGCATTGGAGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RRGQLVPGCSRR*TSSPRLALEGV Trigger: CACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCACCAGCTGCCCGCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 90 bp | GTGCCCGGGTGCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATaGGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAGACCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: VPGCSRRCTSSPRLA*EGVLLAPPPGKTTE Trigger: CTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCACCCGGGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | GAGTGCAGGGCTGGGAGGGCTATAGTCCGCCAGGCGTaGAGTAGCAGCTGCGCTGCCGCTGGTCCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: ECRAGRAIVRQA*SSSCAAAGPTT Trigger: GGTGGTGGGACCAGCGGCAGCGCAGCTGCTACTTCACGCCTGGCGGACTATAGCCCTCCCAGCCCTGCACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | GGTGCTGCAGATCCACCTCCTGGAGAGCGCTCGAACTaGGCCCAGAGAAGGGGTGTCCCAGGTGGTGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: GAADPPPGERSN*AQRRGVPGGGA Trigger: CGCCCCACCACCTGGGACACCCCTTCTCTGGGCCCAGTTCGAGCGCTCTCCAGGAGGTGGATCTGCAGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 90 bp | CAGTCCCAACAGGGAGAGCTGATCGAGCGCAAGCTGCAGGGCTCTTaGGTCATCCAGAGTCTCTCCCCCGCCGCTGCCACCGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSQQGELIERKLQGS*VIQSLSPAAATAAS Trigger: GGAGGCGGCGGTGGCAGCGGCGGGGGAGAGACTCTGGATGACCAAAGAGCCCTGCAGCTTGCGCTCGATCAGCTCTCCCTGTTGGGACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | GCACCAGCAGCCCCAGATTGGCATTGGAGGGTGTGCTaGTGGCGCCACCCCCGGGAAAGACCACAGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: APAAPDWHWRVC*WRHPRERPQRT Trigger: CGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | CCAGCAGCCCCAGATTGGCATTGGAGGGTGTGCTGCTaGCGCCACCCCCGGGAAAGACCACAGAGGACGACG | + |
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Preference number: 6 (lower is better) Translates to: PAAPDWHWRVCC*RHPRERPQRTT Trigger: CGTCGTCCTCTGTGGTCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | GCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATTaGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: AVDGAPAAPDWH*RVCCWRHPRER Trigger: TCTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | GGCACCCTCACTTGGATAGTGGTCTGTCCCGGCAGGTaGGGCGGTCCGGGCACAGCTCCGTTGAGAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: GTLTWIVVCPGR*GGPGTAPLRAV Trigger: CACGGCTCTCAACGGAGCTGTGCCCGGACCGCCCAACCTGCCGGGACAGACCACTATCCAAGTGAGGGTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | TGCAGTCGACGGTGCACCAGCAGCCCCAGATTGGCATaGGAGGGTGTGCTGCTGGCGCCACCCCCGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: CSRRCTSSPRLA*EGVLLAPPPGK Trigger: CTTTCCCGGGGGTGGCGCCAGCAGCACACCCTCCAATGCCAATCTGGGGCTGCTGGTGCACCGTCGACTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | CAGGGAGAGCTGATCGAGCGCAAGCTGCAGGGCTCTTaGGTCATCCAGAGTCTCTCCCCCGCCGCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: QGELIERKLQGS*VIQSLSPAAAT Trigger: GGTGGCAGCGGCGGGGGAGAGACTCTGGATGACCAAAGAGCCCTGCAGCTTGCGCTCGATCAGCTCTCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | GTCCCGGCAGGTTGGGCGGTCCGGGCACAGCTCCGTTaGGAGCCGTGTTCTTGTTACGAGAGGCTCGGATCA | + |
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Preference number: 6 (lower is better) Translates to: VPAGWAVRAQLR*EPCSCYERLGS Trigger: TGATCCGAGCCTCTCGTAACAAGAACACGGCTCTCAACGGAGCTGTGCCCGGACCGCCCAACCTGCCGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | CGCTGCCGCTGGTCCCACCACCGAAGTAAGAGTCTGTaGATGCGCTGCCAAGCGAGCTGGAGCTGTCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RCRWSHHRSKSL*MRCQASWSCRC Trigger: GCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGACCAGCGGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | TGTCCCGGCAGGTTGGGCGGTCCGGGCACAGCTCCGTaGAGAGCCGTGTTCTTGTTACGAGAGGCTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: CPGRLGGPGTAP*RAVFLLREARI Trigger: GATCCGAGCCTCTCGTAACAAGAACACGGCTCTCAACGGAGCTGTGCCCGGACCGCCCAACCTGCCGGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | GCGCCCTCATCACTGTCCAGTCCCAACAGGGAGAGCTaGTCGAGCGCAAGCTGCAGGGCTCTTTGGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: APSSLSSPNRES*SSASCRALWSS Trigger: GGATGACCAAAGAGCCCTGCAGCTTGCGCTCGATCAGCTCTCCCTGTTGGGACTGGACAGTGATGAGGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | GCCGCTGGTCCCACCACCGAAGTAAGAGTCTGTGGATaGGCTGCCAAGCGAGCTGGAGCTGTCGTTGCGATA | + |
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Preference number: 6 (lower is better) Translates to: AAGPTTEVRVCG*AAKRAGAVVAI Trigger: TATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGACCAGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | GCAGGAAGAGGATACTGGTGCTGCAGATCCACCTCCTaGAGAGCGCTCGAACTGGGCCCAGAGAAGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AGRGYWCCRSTS*RALELGPEKGC Trigger: ACACCCCTTCTCTGGGCCCAGTTCGAGCGCTCTCCAGGAGGTGGATCTGCAGCACCAGTATCCTCTTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | TGGTCCCACCACCGAAGTAAGAGTCTGTGGATGCGCTaGCAAGCGAGCTGGAGCTGTCGTTGCGATAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WSHHRSKSLWMR*QASWSCRCDSW Trigger: CCAGCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCGGTGGTGGGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | TCACTTCACTCTCGAAGCACACAGAGCAGTCGCGGCTaGCTTTGCGCCTCAGCCCAGAGGAAGAGGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLHSRSTQSSRG*LCASAQRKRRK Trigger: CTTCCTCCTCTTCCTCTGGGCTGAGGCGCAAAGGCAGCCGCGACTGCTCTGTGTGCTTCGAGAGTGAAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | CATTGGCATGGAAGTCGTTCTCGTCTGTCAGCTCGATaGTGCCACCGGTGCGCAGCGCGATGTGAGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: HWHGSRSRLSAR*CHRCAARCELR Trigger: TCGAAGCTCACATCGCGCTGCGCACCGGTGGCATCATCGAGCTGACAGACGAGAACGACTTCCATGCCAATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | ACCCCCGGGAAAGACCACAGAGGACGACGAGGCAGATaGGGATGCCGAAGAAGAGCAGGAAGAGGATACTGG | + |
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Preference number: 6 (lower is better) Translates to: TPGKDHRGRRGR*GCRRRAGRGYW Trigger: CCAGTATCCTCTTCCTGCTCTTCTTCGGCATCCTCATCTGCCTCGTCGTCCTCTGTGGTCTTTCCCGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | CGCCGGACCCGTGATGCAGATCAAAGCCCACGTCTGTaGCATTGGCATGGAAGTCGTTCTCGTCTGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRTRDADQSPRL*HWHGSRSRLSA Trigger: AGCTGACAGACGAGAACGACTTCCATGCCAATGGCACAGACGTGGGCTTTGATCTGCATCACGGGTCCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CCA 72 bp | CGAAGTAAGAGTCTGTGGATGCGCTGCCAAGCGAGCTaGAGCTGTCGTTGCGATAGCTGGAGAAGGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RSKSLWMRCQAS*SCRCDSWRRAC Trigger: GCAAGCCCTTCTCCAGCTATCGCAACGACAGCTCCAGCTCGCTTGGCAGCGCATCCACAGACTCTTACTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS TCA 72 bp | TGCCGTTATTGTTGTTGTTCCCATTGTGAGCAAAGCTaGGTGCAGGGCTGGGAGGGCTATAGTCCGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CRYCCCSHCEQS*VQGWEGYSPPG Trigger: GCCTGGCGGACTATAGCCCTCCCAGCCCTGCACTCAGCTTTGCTCACAATGGGAACAACAACAATAACGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS GCA 72 bp | GTACTGAGGCTTCCCCCGCTGTGTAGGTGTAACCATTaGCGTTATTGTTGTTGTTCCCATTGTGAGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VLRLPPLCRCNH*RYCCCSHCEQS Trigger: GCTTTGCTCACAATGGGAACAACAACAATAACGGCAATGGTTACACCTACACAGCGGGGGAAGCCTCAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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| CDS CAA 72 bp | TTCTCTGGCATGCCAGTCACCTCGAAAACTGGCTCCTaGTCTCGGCTGGGTGTCACAATATATGTATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FSGMPVTSKTGS*SRLGVTIYVCV Trigger: GACACATACATATATTGTGACACCCAGCCGAGACAAGGAGCCAGTTTTCGAGGTGACTGGCATGCCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082237.7 |
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