Pregenerated sensors for MEX3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074480Ensembl transcript IDs: ENSMUST00000172699.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGTAACAGGCTCCACCGCACCCCAATCCTGCTTTGCCCTGGCCTaGCCCCTCACCAAAGATCTGGCCTCTCTCCTCAGCCAGTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: PVTGSTAPQSCFALA*PLTKDLASLLSQWV Trigger: TACCCACTGGCTGAGGAGAGAGGCCAGATCTTTGGTGAGGGGTCAGGCCAGGGCAAAGCAGGATTGGGGTGCGGTGGAGCCTGTTACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | CCTCTCCTGGCCCGACCAGCGGAACCCGGGAGAGTAGGAGGCTGCTaGCAGACACAAGTGAGCAAGAGGAGTAGTGAAGGGGTGCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: PLLARPAEPGRVGGC*QTQVSKRSSEGVLD Trigger: GTCTAGCACCCCTTCACTACTCCTCTTGCTCACTTGTGTCTGTCAGCAGCCTCCTACTCTCCCGGGTTCCGCTGGTCGGGCCAGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | AATCAACCCCAGCAGACTGGAAGCTCCCAATCTCAGCTAGCAGCCTaGTCTAGCCCTGTCCCCAGGGATAGGGCAGCTCAGCCACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: NQPQQTGSSQSQLAA*SSPVPRDRAAQPLA Trigger: GGCCAGTGGCTGAGCTGCCCTATCCCTGGGGACAGGGCTAGAGCAGGCTGCTAGCTGAGATTGGGAGCTTCCAGTCTGCTGGGGTTGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | ATACCTGATTCCTGTAACAGGCTCCACCGCACCCCAATCCTGCTTTaGCCTGGCCTGACCCCTCACCAAAGATCTGGCCTCTCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: IPDSCNRLHRTPILL*PGLTPHQRSGLSPQ Trigger: CTGAGGAGAGAGGCCAGATCTTTGGTGAGGGGTCAGGCCAGGGCAAAGCAGGATTGGGGTGCGGTGGAGCCTGTTACAGGAATCAGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | GCTCAGCCGAGCTGCACTGAGCTTCGGATGACCAGTGTGTACCCTTaGAAAGACCCTGGGACAGAGCCTCTCCTGTACTTATCCCACACT | + |
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Preference number: 1 (lower is better) Translates to: AQPSCTELRMTSVYP*KDPGTEPLLYLSHT Trigger: AGTGTGGGATAAGTACAGGAGAGGCTCTGTCCCAGGGTCTTTGCAAGGGTACACACTGGTCATCCGAAGCTCAGTGCAGCTCGGCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | ACCACGATCCTACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTaGCCCAGGGCTGTCTCCACCCAACCACTCGACCCTCTGAGCACT | + |
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Preference number: 1 (lower is better) Translates to: TTILLYFLQWRDHLP*PRAVSTQPLDPLST Trigger: AGTGCTCAGAGGGTCGAGTGGTTGGGTGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTAGGATCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | ATTAGGAGTAGGGGCTTCCTAACAGATGGCCAGGCTCAGCCGAGCTaGACTGAGCTTCGGATGACCAGTGTGTACCCTTGCAAAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: IRSRGFLTDGQAQPS*TELRMTSVYPCKDP Trigger: AGGGTCTTTGCAAGGGTACACACTGGTCATCCGAAGCTCAGTGCAGCTCGGCTGAGCCTGGCCATCTGTTAGGAAGCCCCTACTCCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | GCACTCACCCTCGAGCATGCTAGGGAAATCCTCCCCATTCCCAGATaGTACCATCTCCAACTACTGAGGGTCCTAGGGCAAAAAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALTLEHAREILPIPR*YHLQLLRVLGQKGQ Trigger: CTGCCCTTTTTGCCCTAGGACCCTCAGTAGTTGGAGATGGTAGCATCTGGGAATGGGGAGGATTTCCCTAGCATGCTCGAGGGTGAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | AGGCAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTaGCCTCATCCCACATCCTTTCCCCATCCAGGAAGAGTGGGACTC | + |
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Preference number: 1 (lower is better) Translates to: RQVNSQEAGERETSL*PHPTSFPHPGRVGL Trigger: GAGTCCCACTCTTCCTGGATGGGGAAAGGATGTGGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 90 bp | GAGGGTCCTAGGGCAAAAAGGGCAGGGGGACTTCTAGTCTCTAGATaGGGTGAGAAGAGTAAACTGCGGAGAGGGAGAAGTGTTTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: EGPRAKRAGGLLVSR*GEKSKLRRGRSVWA Trigger: AGCCCAAACACTTCTCCCTCTCCGCAGTTTACTCTTCTCACCCCATCTAGAGACTAGAAGTCCCCCTGCCCTTTTTGCCCTAGGACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 90 bp | TGCCTCAAATTAAGTCTGACCACGATCCTACTCTACTTTCTACAGTaGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCACCCAACCA | + |
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Preference number: 1 (lower is better) Translates to: CLKLSLTTILLYFLQ*RDHLPCPRAVSTQP Trigger: TGGTTGGGTGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTAGGATCGTGGTCAGACTTAATTTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 90 bp | TCTAGATGGGGTGAGAAGAGTAAACTGCGGAGAGGGAGAAGTGTTTaGGCTCTAGGGTCAAGAAGTGGCAATGTCAATCACTGGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: SRWGEKSKLRRGRSV*ALGSRSGNVNHWCP Trigger: GGGACACCAGTGATTGACATTGCCACTTCTTGACCCTAGAGCCCAAACACTTCTCCCTCTCCGCAGTTTACTCTTCTCACCCCATCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | GCCCTCATCCCACATCCTTTCCCCATCCAGGAAGAGTGGGACTCCTaGGCTAGAGCTCAGAATATCCCACCCAATTATATACAAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: ALIPHPFPIQEEWDS*ARAQNIPPNYIQAS Trigger: AGATGCTTGTATATAATTGGGTGGGATATTCTGAGCTCTAGCTCAGGAGTCCCACTCTTCCTGGATGGGGAAAGGATGTGGGATGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | TGGGATGGGGTGGGGGAGTTCTCCCAGGCTCATAAGGACAATACTTaGACTCTACTTCCTGAGTCGGAAGTCTTTCGTGGAATGTTAACT | + |
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Preference number: 1 (lower is better) Translates to: WDGVGEFSQAHKDNT*TLLPESEVFRGMLT Trigger: AGTTAACATTCCACGAAAGACTTCCGACTCAGGAAGTAGAGTGCAAGTATTGTCCTTATGAGCCTGGGAGAACTCCCCCACCCCATCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | CCCCTTTCCAGATCTCTAGCCCAGCTTTGTAAGATGGGTAAGTTGTaGGCCCTTTATCGACATCCTCCATCACCCTGGAAGATCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: PLSRSLAQLCKMGKL*ALYRHPPSPWKIYA Trigger: TGCATAGATCTTCCAGGGTGATGGAGGATGTCGATAAAGGGCTCACAACTTACCCATCTTACAAAGCTGGGCTAGAGATCTGGAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | AGCCAAGAGGCCTCTCCCATTCCCGATCTGATTGCTAGCTGGGGCTaGTGGAAAGAAGGCAAGTGCTTAAAAATGCCTATTTCTCACATG | + |
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Preference number: 1 (lower is better) Translates to: SQEASPIPDLIASWG*WKEGKCLKMPISHM Trigger: CATGTGAGAAATAGGCATTTTTAAGCACTTGCCTTCTTTCCATCAGCCCCAGCTAGCAATCAGATCGGGAATGGGAGAGGCCTCTTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 90 bp | TACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGATaGTCCCTAAGTATAATGCCCATAGATGATAAAGGCAGGGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: YFWLSLALGRRPRIR*SLSIMPIDDKGRVP Trigger: TGGAACCCTGCCTTTATCATCTATGGGCATTATACTTAGGGAGCATCTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | AGATCTGGCCTCTCTCCTCAGCCAGTGGGTAAGACAGAGAATTCATaGTTTGTGGCTAATAAGGACTCAATAATGGTTCAGCTAGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: RSGLSPQPVGKTENS*FVANKDSIMVQLGA Trigger: TGCACCTAGCTGAACCATTATTGAGTCCTTATTAGCCACAAATCATGAATTCTCTGTCTTACCCACTGGCTGAGGAGAGAGGCCAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 90 bp | CCCCCTTCTTGGTTTCTCTGCATTGTGTGCAACATCACTTTGACTTaGTTAATTCATGGGTCTGTTTTATTTCCCACCTTTACTTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PPSWFLCIVCNITLT*LIHGSVLFPTFTLH Trigger: ATGCAAAGTAAAGGTGGGAAATAAAACAGACCCATGAATTAATCAAGTCAAAGTGATGTTGCACACAATGCAGAGAAACCAAGAAGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 90 bp | TTTACTTTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTaGATGCCTCAAATTAAGTCTGACCACGATCCTACTCTACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: FTLHLKSSLVICMSH*MPQIKSDHDPTLLS Trigger: AGAAAGTAGAGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAAAGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCTCACCCATCCTCTCCTaGCCCGACCAGCGGAACCCG | + |
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Preference number: 2 (lower is better) Translates to: QVNSQEAGERETSLCPHPSPILS*PDQRNP Trigger: CGGGTTCCGCTGGTCGGGCCAGGAGAGGATGGGTGA...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCAGTTTTCCCTCCTGACTaGCCCTGGCACAGGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: YSTFYSGETIFPAPGLSPVFPPD*PWHRVG Trigger: CCCTACCCTGTGCCAGGGGCAGTCAGGAGGGAAAAC...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGGAGTGGGGGAAAAGGGCTGTCCTCTACATGAAGAGGAACTGGAGGTGGAAAGAAACATGTGGCTaGGGGCTGAGGGAGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LEEWGKRAVLYMKRNWRWKETCG*GLRERG Trigger: CCCCCTCTCCCTCAGCCCCCAGCCACATGTTTCTTT...CCACCTCCAGTTCCTCTTCATGTAGAGGACAGCCCTTTTCCCCCACTCCTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCCCCCACCCCAGCGAGTaGATATTTCCAAGCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: QVNSQEAGERETSLCPHPPHPSE*IFPSTL Trigger: CAAGGTGCTTGGAAATATTCACTCGCTGGGGTGGGG...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCAAATCCTGCTTTGCCCTaGCCTGACCCCTCACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YSTFYSGETIFPAPGLSPNPALP*PDPSPK Trigger: CTTTGGTGAGGGGTCAGGCCAGGGCAAAGCAGGATT...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CAA 90 bp | AGCCCGTCCAGACACATCTCTCTTGCCCCAGGACTTTTCCTACTTTaGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: SPSRHISLAPGLFLL*AFPCLGQKTQDKML Trigger: GAGCATCTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCCTGGGGCAAGAGAGATGTGTCTGGACGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CAA 90 bp | GCCCATCTCACTCCCCCATTGCTTTGTTTTGCTGCTCGCTCACTTTaGCGCTTGTTTCTAGGAAAGGCTCACTCAGCAAGGGTGGGATTG | + |
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Preference number: 2 (lower is better) Translates to: AHLTPPLLCFAARSL*RLFLGKAHSARVGL Trigger: CAATCCCACCCTTGCTGAGTGAGCCTTTCCTAGAAACAAGCGCAAAAGTGAGCGAGCAGCAAAACAAAGCAATGGGGGAGTGAGATGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTAGAGTAGGAGGCTGCTaGCAGACACAAGTGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFRVGGC*QTQVSK Trigger: CTTGCTCACTTGTGTCTGTCAGCAGCCTCCTACTCT...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCAAGTCTTTTGCCTTTGTaGGTAAGGAGTGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: YSTFYSGETIFPAPGLSPSLLPL*VRSGEG Trigger: CCCCTCTCCACTCCTTACCCACAAAGGCAAAAGACT...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTTTTCCCGTCTCAAACTaGTTCTTTGGAGGAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFFPVSN*FFGGVG Trigger: CCCCACTCCTCCAAAGAATCAGTTTGAGACGGGAAA...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTGAAGAGTGGGACTCCTaGGCTAGAGCTCAGAATATC | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFEEWDS*ARAQNI Trigger: GATATTCTGAGCTCTAGCTCAGGAGTCCCACTCTTC...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCATTTCTGTGGGGAAGATaGTGTGATGTGGCCCTAATG | + |
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Preference number: 2 (lower is better) Translates to: YSTFYSGETIFPAPGLSPFLWGR*CDVALM Trigger: CATTAGGGCCACATCACATCATCTTCCCCACAGAAA...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCAGACCCAGGATAAGATaGTCCCTAAGTATAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPRPRIR*SLSIMP Trigger: GGGCATTATACTTAGGGAGCATCTTATCCTGGGTCT...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGGAGTGGGGGAAAAGGGCTGTCCTCTACATGAAGAGGAACTGGAGGTGGACCTCTAACTACAGATaGCAAGTCTCCCTGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LEEWGKRAVLYMKRNWRWTSNYR*QVSLFL Trigger: TAAGAACAGGGAGACTTGCCATCTGTAGTTAGAGGT...CCACCTCCAGTTCCTCTTCATGTAGAGGACAGCCCTTTTCCCCCACTCCTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCCCCAGCTTTGTAAGATaGGTAAGTTGTGAGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: QVNSQEAGERETSLCPHPPSFVR*VSCEPF Trigger: AAAGGGCTCACAACTTACCCATCTTACAAAGCTGGG...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTAAGAGGAACTGGAGGTaGGGGCTATCAAAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFKRNWR*GLSKHS Trigger: AGAGTGTTTTGATAGCCCCCACCTCCAGTTCCTCTT...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCATCTCTCCTCAGCCAGTaGGTAAGACAGAGAATTCAT | + |
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Preference number: 2 (lower is better) Translates to: YSTFYSGETIFPAPGLSPSLLSQ*VRQRIH Trigger: ATGAATTCTCTGTCTTACCCACTGGCTGAGGAGAGA...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCTTGCCCTGTAGTCACTaGTTTTTCAAAAAGCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: QVNSQEAGERETSLCPHPLPCSH*FFKKPY Trigger: GTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCAA...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCGATTTAAGGGTGTGTTaGGGTATCAGAGTTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPDLRVC*GIRVVT Trigger: AGTTACAACTCTGATACCTCAACACACCCTTAAATC...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTGGGCTGTCCTCTACATaGAGAGGAACTGGAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTGLSST*RGTGGG Trigger: CCCACCTCCAGTTCCTCTTCATGTAGAGGACAGCCC...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTCATCCTCCATCACCCTaGAAGATCTATGCAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFHPPSP*KIYADL Trigger: AAGATCTGCATAGATCTTCCAGGGTGATGGAGGATG...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCTATTTCCAAGCACCTTaGCCTGTAGTCACTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: QVNSQEAGERETSLCPHPYFQAP*PVVTDF Trigger: AAAATCAGTGACTACAGGGCAAGGTGCTTGGAAATA...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTGGTCATGTTAGGAGATaGGAGGTCAGGACCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTGHVRR*EVRTRG Trigger: CCCTCTGGTCCTGACCTCCCATCTCCTAACATGACC...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCTTTTGGCTTTCCCTTaGCTTGGGCAGAAGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTLLAFP*LGQKTQ Trigger: CTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTTCTCAGCTAGCAGCCTaGTCTAGCCCTGTCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHLKSSLVICMSHWMPQISQLAA*SSPVPR Trigger: CCTGGGGACAGGGCTAGAGCAGGCTGCTAGCTGAGA...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTGGTGCCCATTTGGTTTaGTTTCTATTGTACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: LTQQGWDWICGAPSVTVFGAHLV*FLLYRH Trigger: ATGTCTGTACAATAGAAACCAAACCAAATGGGCACC...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGCAAGATGGCTCACATTaGTGGAAAGGAGGGAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKQDGSH*WKGGKL Trigger: CAGCTTCCCTCCTTTCCATCAATGTGAGCCATCTTG...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTTGCTGGAGGCTAAGCTaGTCAGCAGTTGCTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LHLKSSLVICMSHWMPQICWRLS*SAVAGS Trigger: TGAGCCAGCAACTGCTGATCAGCTTAGCCTCCAGCA...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCAGACACATCTCTCTTaGCCCAGGACTTTTCCTACT | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTQTHLS*PRTFPT Trigger: AGTAGGAAAAGTCCTGGGGCAAGAGAGATGTGTCTG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTGGCCACCCAAGTTCCTaGACTTTTATCTGTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTGHPSS*TFICSW Trigger: CCAAGAACAGATAAAAGTGCAGGAACTTGGGTGGCC...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGCTCAAACTGATTCTTTaGAGGAGTGGGGGAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKLKLIL*RSGGKG Trigger: CCCTTTTCCCCCACTCCTCCAAAGAATCAGTTTGAG...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTCTCACTCAGCAAGGGTaGGATTGGATCTGTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LHLKSSLVICMSHWMPQILTQQG*DWICGA Trigger: GGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTATGGAAAGAAACATGTaGCTGGGGGCTGAGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LHLKSSLVICMSHWMPQIMERNM*LGAEGE Trigger: CTCTCCCTCAGCCCCCAGCCACATGTTTCTTTCCAT...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTTACATGAAGAGGAACTaGAGGTGGGGGCTATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTYMKRN*RWGLSK Trigger: TTTTGATAGCCCCCACCTCCAGTTCCTCTTCATGTA...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCCCAGGGTGCCCATTTaGTTTGGTTTCTATTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTPRVPI*FGFYCT Trigger: TGTACAATAGAAACCAAACCAAATGGGCACCCTGGG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCTTCTAGTCTCTAGATaGGGTGAGAAGAGTAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTLLVSR*GEKSKL Trigger: CAGTTTACTCTTCTCACCCCATCTAGAGACTAGAAG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTAAGACAGAGAATTCATaGTTTGTGGCTAATAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VICMSHWMPQIKSDHDPTKTENS*FVANKD Trigger: GTCCTTATTAGCCACAAATCATGAATTCTCTGTCTT...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 90 bp | GGGTCTGTTTTATTTCCCACCTTTACTTTGCATTTGAAATCTTCCTaGGTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GSVLFPTFTLHLKSS*VICMSHWMPQIKSD Trigger: GTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAAAGTAAAGGTGGGAAATAAAACAGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGTTAGCCCAGGTTCTTTaGTACATTTATACGGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKLAQVL*YIYTVI Trigger: TATTACCGTATAAATGTAGCAAAGAACCTGGGCTAA...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR TCA 72 bp | GGCTCCACCGCACCCCAATCCTGCTTTGCCCTGGCCTaGCCCCTCACCAAAGATCTGGCCTCTCTCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSTAPQSCFALA*PLTKDLASLLS Trigger: GCTGAGGAGAGAGGCCAGATCTTTGGTGAGGGGTCAGGCCAGGGCAAAGCAGGATTGGGGTGCGGTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR TCA 72 bp | GCCCCAGGGCTGTCTCCACCCAACCACTCGACCCTCTaGGCACTCACCCTCGAGCATGCTAGGGAAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: APGLSPPNHSTL*ALTLEHAREIL Trigger: GAGGATTTCCCTAGCATGCTCGAGGGTGAGTGCTCAGAGGGTCGAGTGGTTGGGTGGAGACAGCCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR TCA 72 bp | GCCCGACCAGCGGAACCCGGGAGAGTAGGAGGCTGCTaGCAGACACAAGTGAGCAAGAGGAGTAGTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARPAEPGRVGGC*QTQVSKRSSEG Trigger: CCCTTCACTACTCCTCTTGCTCACTTGTGTCTGTCAGCAGCCTCCTACTCTCCCGGGTTCCGCTGGTCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR GCA 72 bp | CAGCAGACTGGAAGCTCCCAATCTCAGCTAGCAGCCTaGTCTAGCCCTGTCCCCAGGGATAGGGCAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQTGSSQSQLAA*SSPVPRDRAAQ Trigger: CTGAGCTGCCCTATCCCTGGGGACAGGGCTAGAGCAGGCTGCTAGCTGAGATTGGGAGCTTCCAGTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCACACCCCAATCCTGCTTaGCCCTGGCCTGACCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YSTFYSGETIFPAPGLSPHPNPA*PWPDPS Trigger: TGAGGGGTCAGGCCAGGGCAAAGCAGGATTGGGGTG...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CCA 72 bp | AGCTCCACCTGGCTCTTGAACCCACTGGTAGCAAGATaGACCGAGGTGACTTCAAGGACTTCCTCAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSTWLLNPLVAR*TEVTSRTSSGW Trigger: CCACCCTGAGGAAGTCCTTGAAGTCACCTCGGTCCATCTTGCTACCAGTGGGTTCAAGAGCCAGGTGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR TCA 72 bp | CTTCCTAACAGATGGCCAGGCTCAGCCGAGCTGCACTaGGCTTCGGATGACCAGTGTGTACCCTTGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPNRWPGSAELH*ASDDQCVPLQR Trigger: TCTTTGCAAGGGTACACACTGGTCATCCGAAGCTCAGTGCAGCTCGGCTGAGCCTGGCCATCTGTTAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 72 bp | AATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTaGCCTCATCCCACATCCTTTCCCCATCCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSQEAGERETSL*PHPTSFPHPGR Trigger: TCTTCCTGGATGGGGAAAGGATGTGGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR GCA 72 bp | AGCTGCACTGAGCTTCGGATGACCAGTGTGTACCCTTaGAAAGACCCTGGGACAGAGCCTCTCCTGTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SCTELRMTSVYP*KDPGTEPLLYL Trigger: TAAGTACAGGAGAGGCTCTGTCCCAGGGTCTTTGCAAGGGTACACACTGGTCATCCGAAGCTCAGTGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 72 bp | ACTGCATGGGTGCTGGAGGCTAAGCTGATCAGCAGTTaGTGGCTCATTCACAGAATAGCTCCACCTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TAWVLEAKLISS*WLIHRIAPPGS Trigger: AGAGCCAGGTGGAGCTATTCTGTGAATGAGCCAGCAACTGCTGATCAGCTTAGCCTCCAGCACCCATGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR GCA 72 bp | CCCACTACAGATGTGAAGGGAAACAGCGCTAGAAACTaGAATGCCGCTCTCATACTGCATGGGTGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTTDVKGNSARN*NAALILHGCWR Trigger: CCTCCAGCACCCATGCAGTATGAGAGCGGCATTGCAGTTTCTAGCGCTGTTTCCCTTCACATCTGTAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 72 bp | CTCGAGCATGCTAGGGAAATCCTCCCCATTCCCAGATaGTACCATCTCCAACTACTGAGGGTCCTAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LEHAREILPIPR*YHLQLLRVLGQ Trigger: TTGCCCTAGGACCCTCAGTAGTTGGAGATGGTAGCATCTGGGAATGGGGAGGATTTCCCTAGCATGCTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCAACTTTTGGCTTTCCCTaGCCTTGGGCAGAAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: YSTFYSGETIFPAPGLSPTFGFP*PWAEDP Trigger: TGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGT...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 72 bp | TTAAGTCTGACCACGATCCTACTCTACTTTCTACAGTaGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSLTTILLYFLQ*RDHLPCPRAVS Trigger: GGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTAGGATCGTGGTCAGACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 72 bp | GTGGGGGAGTTCTCCCAGGCTCATAAGGACAATACTTaGACTCTACTTCCTGAGTCGGAAGTCTTTCGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGEFSQAHKDNT*TLLPESEVFRG Trigger: TCCACGAAAGACTTCCGACTCAGGAAGTAGAGTGCAAGTATTGTCCTTATGAGCCTGGGAGAACTCCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 72 bp | GAGAGGGAGAAGTGTTTGGGCTCTAGGGTCAAGAAGTaGCAATGTCAATCACTGGTGTCCCGCTTGCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EREKCLGSRVKK*QCQSLVSRLLK Trigger: CTTAAGCAAGCGGGACACCAGTGATTGACATTGCCACTTCTTGACCCTAGAGCCCAAACACTTCTCCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTTCTCAAACTGATTCTTaGGAGGAGTGGGGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTQQGWDWICGAPSVTVFSQTDS*EEWGKR Trigger: CCTTTTCCCCCACTCCTCCAAAGAATCAGTTTGAGA...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR TCA 72 bp | ATGCAAAGCCAGGCTTCCGGATTTCTGTGGGGAAGATaGTGTGATGTGGCCCTAATGGGTGATTCTTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: MQSQASGFLWGR*CDVALMGDSYL Trigger: CAGATAAGAATCACCCATTAGGGCCACATCACATCATCTTCCCCACAGAAATCCGGAAGCCTGGCTTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 72 bp | CCCCTCACCAAAGATCTGGCCTCTCTCCTCAGCCAGTaGGTAAGACAGAGAATTCATGATTTGTGGCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: PLTKDLASLLSQ*VRQRIHDLWLI Trigger: TATTAGCCACAAATCATGAATTCTCTGTCTTACCCACTGGCTGAGGAGAGAGGCCAGATCTTTGGTGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCATTGGTTTGGTTTCTATaGTACAGACATCTCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: YSTFYSGETIFPAPGLSPLVWFL*YRHLKM Trigger: CATCTTGAGATGTCTGTACAATAGAAACCAAACCAA...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCACTCCCCCATTGCTTaGTTTTGCTGCTCGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: VICMSHWMPQIKSDHDPTHSPIA*FCCSLT Trigger: AGTGAGCGAGCAGCAAAACAAAGCAATGGGGGAGTG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR GCA 72 bp | CTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGATaGTCCCTAAGTATAATGCCCATAGATGATAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSLALGRRPRIR*SLSIMPIDDKG Trigger: GCCTTTATCATCTATGGGCATTATACTTAGGGAGCATCTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCATCTCCCTATACTGTaGGGAACTCAGGATATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VICMSHWMPQIKSDHDPTHLPIL*GTQDMS Trigger: ACTCATATCCTGAGTTCCCAACAGTATAGGGAGATG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR CCA 72 bp | CATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTaGATGCCTCAAATTAAGTCTGACCACGATCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: HLKSSLVICMSH*MPQIKSDHDPT Trigger: AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTAGATTTAAGGGTGTGTaGAGGTATCAGAGTTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LHLKSSLVICMSHWMPQIRFKGV*RYQSCN Trigger: GTTACAACTCTGATACCTCAACACACCCTTAAATCT...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCCTGGCCCCGCAGAGGTaGCAGGAGAGCGATGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPLAPQR*QESDAR Trigger: GCGCGCATCGCTCTCCTGCCACCTCTGCGGGGCCAG...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS-3UTR TCA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCCACCCGCCAGGCGTCTaGGTAGCGGCTGTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPHPPGV*VAAVQG Trigger: GCCTTGGACAGCCGCTACTCAGACGCCTGGCGGGTG...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGCCAAAGTCCCCGCCCTaGTCGCTTAGGCGCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPPKSPP*SLRRGA Trigger: GGCCCCGCGCCTAAGCGAGCAGGGCGGGGACTTTGG...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGGGGAGCCCGGTCAGCTaGTCTGGCCCCGCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPGSPVS*SGPAEV Trigger: CACCTCTGCGGGGCCAGAGCAGCTGACCGGGCTCCC...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGAGTGGGGGAAAAGGGCTGTCCTCTACATGAAGAGGAACTGGAGGTGGAGAGCGCGCAGAGCTTaGCGTCGTTCGCCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEWGKRAVLYMKRNWRWRARRA*RRSPLW Trigger: CCAAAGGGGCGAACGACGCCAAGCTCTGCGCGCTCT...CCACCTCCAGTTCCTCTTCATGTAGAGGACAGCCCTTTTCCCCCACTCCTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGCAGCCCAGGCTGTTCTaGCTGAAGGTGGAGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPQPRLF*LKVESG Trigger: GCCGCTCTCCACCTTCAGGCAGAACAGCCTGGGCTG...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTGATGGTCACTTGGCCTaGCAGAGCAGGGGCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTQQGWDWICGAPSVTVFDGHLA*QSRGHA Trigger: GGCGTGGCCCCTGCTCTGCCAGGCCAAGTGACCATC...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGCGCACTCCGTGGTGTTaGTGCTGCCCTTCAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPRTPWC*CCPSVA Trigger: TGCGACTGAAGGGCAGCAGCAACACCACGGAGTGCG...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGCGGGAACGCACTCCGTaGTGTTGCTGCTGCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPRERTP*CCCCPS Trigger: TGAAGGGCAGCAGCAACACCACGGAGTGCGTTCCCG...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGACTCCGTGGTGTTGCTaGTGCCCTTCAGTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPTPWCC*CPSVAA Trigger: AGCTGCGACTGAAGGGCAGCAGCAACACCACGGAGT...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGGTGCGCACAGCGATGTaGGTCTCGATCTCCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKVRTAM*VSISSR Trigger: GCGGGAGGAGATCGAGACGCACATCGCTGTGCGCAC...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGACACGGATGGTCACTTaGCCTGGCAGAGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKTRMVT*PGRAGA Trigger: GGCCCCTGCTCTGCCAGGCCAAGTGACCATCCGTGT...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGGCAGACAGGACACTCTaGGTCCGTCCTCTCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPADRTL*VRPLAD Trigger: ATCTGCGAGAGGACGGACCCAGAGTGTCCTGTCTGC...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGTCTTGCAGCCTTGCCTaGCCACGATCTCGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKSCSLA*PRSRPR Trigger: ACGTGGCCGAGATCGTGGGCAGGCAAGGCTGCAAGA...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGTTAATCTTGCAGCCTTaGCTGCCCACGATCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPLILQP*LPTISA Trigger: GGCCGAGATCGTGGGCAGGCAAGGCTGCAAGATTAA...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCCAAGAATCTTGCCGGTaGGCACAGCGATGTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVNSQEAGERETSLCPHPQESCR*AQRCAS Trigger: AGACGCACATCGCTGTGCGCACCGGCAAGATTCTTG...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTAGTCACTGATTTTTCAAAAAGCCCTACAGGTCCAGGGCAGCACCCGAGTCACCATGAACACTaGCTCCTCACCTCGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPVVTDFSKSPTGPGQHPSHHEH*LLTSHR Trigger: CCTGTGCGAGGTGAGGAGCCAGTGTTCATGGTGACT...CGGGTGCTGCCCTGGACCTGTAGGGCTTTTTGAAAAATCAGTGACTACAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 72 bp | CCCCTGCCCCTGGGCAACCCAGGGTGCCCATTTGGTTaGGTTTCTATTGTACAGACATCTCAAGATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPLGNPGCPFG*VSIVQTSQDGS Trigger: TGAGCCATCTTGAGATGTCTGTACAATAGAAACCAAACCAAATGGGCACCCTGGGTTGCCCAGGGGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 72 bp | CCCATCCCCTGCCCCTGGGCAACCCAGGGTGCCCATTaGGTTTGGTTTCTATTGTACAGACATCTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PIPCPWATQGAH*VWFLLYRHLKM Trigger: CATCTTGAGATGTCTGTACAATAGAAACCAAACCAAATGGGCACCCTGGGTTGCCCAGGGGCAGGGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGAGTGGGGGAAAAGGGCTGTCCTCTACATGAAGAGGAACTGGAGGTGGCTCGCACAGGTGTCTTaGTGTAGGTGTTGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEWGKRAVLYMKRNWRWLAQVS*CRCWFW Trigger: CCAAAACCAACACCTACATCAAGACACCTGTGCGAG...CCACCTCCAGTTCCTCTTCATGTAGAGGACAGCCCTTTTCCCCCACTCCTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTCGGCGCCAGACTTGTTaGGTGAGGCTCTTATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQQGWDWICGAPSVTVFRRQTC*VRLLSW Trigger: CCATGATAAGAGCCTCACGCAACAAGTCTGGCGCCG...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | CTCACTCAGCAAGGGTGGGATTGGATCTGTGGAGCCCCTAGTGTAACAGTCTTTAGTTTAGAGAAACCCTaGAGTGGCTCTCCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQQGWDWICGAPSVTVFSLEKP*SGSPGG Trigger: GCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACT...AAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCCTTGCTGAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGCCGTCCTCTCGCAGATaGGTACTGCACACTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKPSSRR*VLHTPC Trigger: GCATGGAGTGTGCAGTACGCATCTGCGAGAGGACGG...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTGGCCCGCGCGTGCCTTaGCTGAAGAGGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VICMSHWMPQIKSDHDPTGPRVP*LKRRRR Trigger: CCTCCTCCTCCTCTTCAGCCAAGGCACGCGCGGGCC...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR TCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGGCTCAGCTGCAGAGATaGTCTCCCGCCGGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKAQLQR*SPAGLW Trigger: CCACAGCCCGGCGGGAGATCATCTCTGCAGCTGAGC...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TACTCTACTTTCTACAGTGGAGAGACCATCTTCCCTGCCCCAGGGCTGTCTCCACTCGCAGATGCGTACTaGACACTCCATGCAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTFYSGETIFPAPGLSPLADAY*TLHAEK Trigger: CTTTTCTGCATGGAGTGTGCAGTACGCATCTGCGAG...TGGAGACAGCCCTGGGGCAGGGAAGATGGTCTCTCCACTGTAGAAAGTAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGCCGTGGTGTTGCTGCTaGCCTTCAGTCGCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKPWCCC*PSVAAR Trigger: CCGAGCTGCGACTGAAGGGCAGCAGCAACACCACGG...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTTCTCCCGCCGGGCTGTaGCCACGTCTTCCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHLKSSLVICMSHWMPQISPAGL*PRLPAS Trigger: GGAGGCGGGAAGACGTGGCCACAGCCCGGCGGGAGA...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTAGAGAAACCCTGCAGTaGCTCTCCGGGTGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VICMSHWMPQIKSDHDPTRETLQ*LSGWPP Trigger: CGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCT...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTCCAGGCTGTTCTGCCTaGAGGTGGAGAGCGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VICMSHWMPQIKSDHDPTPGCSA*RWRAAY Trigger: GTAAGCCGCTCTCCACCTTCAGGCAGAACAGCCTGG...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR TCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGTGGCTTGTGTGGCGGTaGTGTGGCAGACAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKWLVWR*CGRQDT Trigger: AGTGTCCTGTCTGCCACATCACCGCCACACAAGCCA...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 72 bp | CCTGAGTCGGAAGTCTTTCGTGGAATGTTAACTTCTTaGAGACTCCATGAAGCCAGGAGTAGTGGTGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PESEVFRGMLTS*RLHEARSSGAN Trigger: GTTCGCACCACTACTCCTGGCTTCATGGAGTCTCAAAGAAGTTAACATTCCACGAAAGACTTCCGACTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTCGCCGCATTCGCCTATaGAGCCCAGGCTGTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHLKSSLVICMSHWMPQIRRIRL*SPGCSA Trigger: GGCAGAACAGCCTGGGCTGCATAGGCGAATGCGGCG...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CCA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTTGTGTGGCGGTGATGTaGCAGACAGGACACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLKSSLVICMSHWMPQICVAVM*QTGHSG Trigger: CCCAGAGTGTCCTGTCTGCCACATCACCGCCACACA...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR GCA 90 bp | TACTTTTATACATTCTACCGGGCTCAGGGGCCCACAATGCTACTAAACTTTAAGGTACTGCACACTCCATaGAGAAAAGGTTGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YFYTFYRAQGPTMLLNFKVLHTP*RKGCVH Trigger: GTGGACACAACCTTTTCTGCATGGAGTGTGCAGTAC...CTTAAAGTTTAGTAGCATTGTGGGCCCCTGAGCCCGGTAGAATGTATAAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 72 bp | AAGCTTCTCTTAGCTGCTTCCAGATTTAAGGGTGTGTaGAGGTATCAGAGTTGTAACTCTAGTAAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLLAASRFKGV*RYQSCNSSKTY Trigger: ATAAGTTTTACTAGAGTTACAACTCTGATACCTCAACACACCCTTAAATCTGGAAGCAGCTAAGAGAAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| 3UTR CAA 72 bp | TTATTTCCCACCTTTACTTTGCATTTGAAATCTTCCTaGGTGATTTGTATGAGTCACTGGATGCCTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LFPTFTLHLKSS*VICMSHWMPQI Trigger: AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAAAGTAAAGGTGGGAAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 90 bp | CCCTGCAGTGGCTCTCCGGGTGGCCTCCGAGGGAGCCCGGTCAGCTaGTCTGGCCCCGCAGAGGTGGCAGGAGAGCGATGCGCGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSGSPGGLRGSPVS*SGPAEVAGERCAPG Trigger: CCCAGGCGCGCATCGCTCTCCTGCCACCTCTGCGGGGCCAGAGCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 90 bp | CTGCCGGGGCTCCGCAGCCCGCCTGTCCCCAGTTTAGAGAAACCCTaGAGTGGCTCTCCGGGTGGCCTCCGAGGGAGCCCGGTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGLRSPPVPSLEKP*SGSPGGLRGSPVSC Trigger: GCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACTGGGGACAGGCGGGCTGCGGAGCCCCGGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS CCA 90 bp | GGGGCTCCGCAGCCCGCCTGTCCCCAGTTTAGAGAAACCCTGCAGTaGCTCTCCGGGTGGCCTCCGAGGGAGCCCGGTCAGCTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAPQPACPQFRETLQ*LSGWPPREPGQLLW Trigger: CCAGAGCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACTGGGGACAGGCGGGCTGCGGAGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS CCA 90 bp | CCCGCCTGTCCCCAGTTTAGAGAAACCCTGCAGTGGCTCTCCGGGTaGCCTCCGAGGGAGCCCGGTCAGCTGCTCTGGCCCCGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PACPQFRETLQWLSG*PPREPGQLLWPRRG Trigger: ACCTCTGCGGGGCCAGAGCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACTGGGGACAGGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS TCA 90 bp | GGTGGAGAGCGGCTTACAGCCTGGAGCATGCACCCGCCAGGCGTCTaGGTAGCGGCTGTCCAAGGCAGCGTCAGGGCTGCCAGCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGERLTAWSMHPPGV*VAAVQGSVRAASQE Trigger: TTCCTGGCTGGCAGCCCTGACGCTGCCTTGGACAGCCGCTACTCAGACGCCTGGCGGGTGCATGCTCCAGGCTGTAAGCCGCTCTCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS TCA 90 bp | CCGAGTCCACGCCGCATTCGCCTATGCAGCCCAGGCTGTTCTGCCTaGAGGTGGAGAGCGGCTTACAGCCTGGAGCATGCACCCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPRRIRLCSPGCSA*RWRAAYSLEHAPAR Trigger: CCTGGCGGGTGCATGCTCCAGGCTGTAAGCCGCTCTCCACCTTCAGGCAGAACAGCCTGGGCTGCATAGGCGAATGCGGCGTGGACTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 90 bp | AAGGCCGAGTCCACGCCGCATTCGCCTATGCAGCCCAGGCTGTTCTaGCTGAAGGTGGAGAGCGGCTTACAGCCTGGAGCATGCACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KAESTPHSPMQPRLF*LKVESGLQPGACTR Trigger: GCGGGTGCATGCTCCAGGCTGTAAGCCGCTCTCCACCTTCAGGCAGAACAGCCTGGGCTGCATAGGCGAATGCGGCGTGGACTCGGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 90 bp | CCCGCCAGGCGTCTGAGTAGCGGCTGTCCAAGGCAGCGTCAGGGCTaGCAGCCAGGAAGTCGCCGTCGCTGTTGTATTCAAGAATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PARRLSSGCPRQRQG*QPGSRRRCCIQESC Trigger: GCAAGATTCTTGAATACAACAGCGACGGCGACTTCCTGGCTGGCAGCCCTGACGCTGCCTTGGACAGCCGCTACTCAGACGCCTGGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTTAATTCACAAGAGGCAGGAGAGAGAGAGACCTCCCTCTGCCCTCATCCCGGGCCCGCGCGTGCCTaGGCTGAAGAGGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVNSQEAGERETSLCPHPGPARA*AEEEEE Trigger: CTCCTCCTCCTCTTCAGCCAAGGCACGCGCGGGCCC...GGGATGAGGGCAGAGGGAGGTCTCTCTCTCTCCTGCCTCTTGTGAATTAACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCAAGGCGGCGCCAGACTaGTTGCGTGAGGCTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPKAAPD*LREALI Trigger: GATAAGAGCCTCACGCAACAAGTCTGGCGCCGCCTT...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGCGAGTGAATATTTCCAAGCACCTTGCCCTGTAGTCACTGATTTTTCACGCGCACGCTCCACGTaGCCCGGTGCGCCGGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: TPASEYFQAPCPVVTDFSRARST*PGAPVI Trigger: GATAACCGGCGCACCGGGCAACGTGGAGCGTGCGCG...TGAAAAATCAGTGACTACAGGGCAAGGTGCTTGGAAATATTCACTCGCTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGCTTAATCTTGCAGCCTaGCCTGCCCACGATCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKLNLAA*PAHDLG Trigger: GCCGAGATCGTGGGCAGGCAAGGCTGCAAGATTAAG...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGCTAGACCTATCACAATACCTGATTCCTGTAACAGGCTCCACCGCACCCAAGTCGCCGTCGCTGTaGTATTCAAGAATCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GVLDLSQYLIPVTGSTAPKSPSL*YSRILP Trigger: CGGCAAGATTCTTGAATACAACAGCGACGGCGACTT...GGGTGCGGTGGAGCCTGTTACAGGAATCAGGTATTGTGATAGGTCTAGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTTTCCTACTTTTGGCTTTCCCTTGCCTTGGGCAGAAGACCCAGGATAAGACCCAGGAGGCAGAGTaGATCAAGAGCCAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLFLLLAFPCLGQKTQDKTQEAE*IKSQLK Trigger: CTTCAGCTGGCTCTTGATCAACTCTGCCTCCTGGGT...CTTATCCTGGGTCTTCTGCCCAAGGCAAGGGAAAGCCAAAAGTAGGAAAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | TTGCATTTGAAATCTTCCTTGGTGATTTGTATGAGTCACTGGATGCCTCAAATTACGCACTCCGTGGTGTaGCTGCTGCCCTTCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLKSSLVICMSHWMPQITHSVV*LLPFSR Trigger: GCGACTGAAGGGCAGCAGCAACACCACGGAGTGCGT...AATTTGAGGCATCCAGTGACTCATACAAATCACCAAGGAAGATTTCAAATGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS-3UTR CAA 90 bp | GTGATTTGTATGAGTCACTGGATGCCTCAAATTAAGTCTGACCACGATCCTACTAAATATTCGGATGGCTaGTGTGGCGGTGATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VICMSHWMPQIKSDHDPTKYSDG*CGGDVA Trigger: TGCCACATCACCGCCACACAAGCCATCCGAATATTT...AGTAGGATCGTGGTCAGACTTAATTTGAGGCATCCAGTGACTCATACAAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 72 bp | GGCTCTCCGGGTGGCCTCCGAGGGAGCCCGGTCAGCTaGTCTGGCCCCGCAGAGGTGGCAGGAGAGCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPGGLRGSPVS*SGPAEVAGERC Trigger: GCATCGCTCTCCTGCCACCTCTGCGGGGCCAGAGCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
||
| CDS GCA 72 bp | CTCCGCAGCCCGCCTGTCCCCAGTTTAGAGAAACCCTaGAGTGGCTCTCCGGGTGGCCTCCGAGGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSPPVPSLEKP*SGSPGGLRGSP Trigger: CGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACTGGGGACAGGCGGGCTGCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS TCA 72 bp | CGGCTTACAGCCTGGAGCATGCACCCGCCAGGCGTCTaGGTAGCGGCTGTCCAAGGCAGCGTCAGGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RLTAWSMHPPGV*VAAVQGSVRAA Trigger: GGCAGCCCTGACGCTGCCTTGGACAGCCGCTACTCAGACGCCTGGCGGGTGCATGCTCCAGGCTGTAAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CCA 72 bp | CCCCAGTTTAGAGAAACCCTGCAGTGGCTCTCCGGGTaGCCTCCGAGGGAGCCCGGTCAGCTGCTCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQFRETLQWLSG*PPREPGQLLWP Trigger: GGGCCAGAGCAGCTGACCGGGCTCCCTCGGAGGCCACCCGGAGAGCCACTGCAGGGTTTCTCTAAACTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 72 bp | TGCTCGGAGGTGGGCACGGGAACGCACTCCGTGGTGTaGCTGCTGCCCTTCAGTCGCAGCTCGGCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSEVGTGTHSVV*LLPFSRSSASL Trigger: CAAAGAGGCCGAGCTGCGACTGAAGGGCAGCAGCAACACCACGGAGTGCGTTCCCGTGCCCACCTCCGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | AGGTGGGCACGGGAACGCACTCCGTGGTGTTGCTGCTaGCCTTCAGTCGCAGCTCGGCCTCTTTGTAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RWARERTPWCCC*PSVAARPLCRA Trigger: CGCTCTACAAAGAGGCCGAGCTGCGACTGAAGGGCAGCAGCAACACCACGGAGTGCGTTCCCGTGCCCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | CGGAGGTGGGCACGGGAACGCACTCCGTGGTGTTGCTaGTGCCCTTCAGTCGCAGCTCGGCCTCTTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RRWARERTPWCC*CPSVAARPLCR Trigger: TCTACAAAGAGGCCGAGCTGCGACTGAAGGGCAGCAGCAACACCACGGAGTGCGTTCCCGTGCCCACCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS TCA 72 bp | CGCCGCATTCGCCTATGCAGCCCAGGCTGTTCTGCCTaGAGGTGGAGAGCGGCTTACAGCCTGGAGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: RRIRLCSPGCSA*RWRAAYSLEHA Trigger: TGCATGCTCCAGGCTGTAAGCCGCTCTCCACCTTCAGGCAGAACAGCCTGGGCTGCATAGGCGAATGCGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | TCCACGCCGCATTCGCCTATGCAGCCCAGGCTGTTCTaGCTGAAGGTGGAGAGCGGCTTACAGCCTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: STPHSPMQPRLF*LKVESGLQPGA Trigger: TGCTCCAGGCTGTAAGCCGCTCTCCACCTTCAGGCAGAACAGCCTGGGCTGCATAGGCGAATGCGGCGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 90 bp | TCCAAGGCAGCGTCAGGGCTGCCAGCCAGGAAGTCGCCGTCGCTGTaGTATTCAAGAATCTTGCCGGTGCGCACAGCGATGTGCGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SKAASGLPARKSPSL*YSRILPVRTAMCVS Trigger: CGAGACGCACATCGCTGTGCGCACCGGCAAGATTCTTGAATACAACAGCGACGGCGACTTCCTGGCTGGCAGCCCTGACGCTGCCTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | GAGCAGGGGCCACGCCAAAGGCGGCGCCAGACTTGTTaGGTGAGGCTCTTATCATGGAGAAGTGCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EQGPRQRRRQTC*VRLLSWRSAQL Trigger: CAGCTGAGCACTTCTCCATGATAAGAGCCTCACGCAACAAGTCTGGCGCCGCCTTTGGCGTGGCCCCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | TCCCGGCTGGGAGTGATGATGTACGTGTTGGTCTGCTaGTGGATGCGTTTGATGGTCGCTCCCTTGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRLGVMMYVLVC*WMRLMVAPLGP Trigger: GGGCCCCAAGGGAGCGACCATCAAACGCATCCAGCAGCAGACCAACACGTACATCATCACTCCCAGCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | CGTCTGAGTAGCGGCTGTCCAAGGCAGCGTCAGGGCTaGCAGCCAGGAAGTCGCCGTCGCTGTTGTATTCAA | + |
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Preference number: 6 (lower is better) Translates to: RLSSGCPRQRQG*QPGSRRRCCIQ Trigger: TTGAATACAACAGCGACGGCGACTTCCTGGCTGGCAGCCCTGACGCTGCCTTGGACAGCCGCTACTCAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CCA 72 bp | GGCTTGTGTGGCGGTGATGTGGCAGACAGGACACTCTaGGTCCGTCCTCTCGCAGATGCGTACTGCACACTC | + |
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Preference number: 6 (lower is better) Translates to: GLCGGDVADRTL*VRPLADAYCTL Trigger: GAGTGTGCAGTACGCATCTGCGAGAGGACGGACCCAGAGTGTCCTGTCTGCCACATCACCGCCACACAAGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 72 bp | GGCAGAGCAGGGGCCACGCCAAAGGCGGCGCCAGACTaGTTGCGTGAGGCTCTTATCATGGAGAAGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRAGATPKAAPD*LREALIMEKCS Trigger: TGAGCACTTCTCCATGATAAGAGCCTCACGCAACAAGTCTGGCGCCGCCTTTGGCGTGGCCCCTGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 72 bp | GCGTCAGGGCTGCCAGCCAGGAAGTCGCCGTCGCTGTaGTATTCAAGAATCTTGCCGGTGCGCACAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: ASGLPARKSPSL*YSRILPVRTAM Trigger: CATCGCTGTGCGCACCGGCAAGATTCTTGAATACAACAGCGACGGCGACTTCCTGGCTGGCAGCCCTGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS TCA 72 bp | AGGGGCCACGCCAAAGGCGGCGCCAGACTTGTTGCGTaGGGCTCTTATCATGGAGAAGTGCTCAGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGHAKGGARLVA*GSYHGEVLSCR Trigger: TCTGCAGCTGAGCACTTCTCCATGATAAGAGCCTCACGCAACAAGTCTGGCGCCGCCTTTGGCGTGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | AGTCGCCGTCGCTGTTGTATTCAAGAATCTTGCCGGTaGGCACAGCGATGTGCGTCTCGATCTCCTCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRRRCCIQESCR*AQRCASRSPPA Trigger: CGCGGGAGGAGATCGAGACGCACATCGCTGTGCGCACCGGCAAGATTCTTGAATACAACAGCGACGGCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 72 bp | AGAGCAGGGGCCACGCCAAAGGCGGCGCCAGACTTGTaGCGTGAGGCTCTTATCATGGAGAAGTGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RAGATPKAAPDL*REALIMEKCSA Trigger: AGCTGAGCACTTCTCCATGATAAGAGCCTCACGCAACAAGTCTGGCGCCGCCTTTGGCGTGGCCCCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS GCA 72 bp | GGCTTGTCTCTGCCACGCCATAGTACACGTCCTGCTTaGCCACACCGTAGCCCGGAAACAGATATCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLSLPRHSTRPA*PHRSPETDIRC Trigger: ACAGCGGATATCTGTTTCCGGGCTACGGTGTGGGCAAGCAGGACGTGTACTATGGCGTGGCAGAGACAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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| CDS CAA 72 bp | GCCAGGAAGTCGCCGTCGCTGTTGTATTCAAGAATCTaGCCGGTGCGCACAGCGATGTGCGTCTCGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: ARKSPSLLYSRI*PVRTAMCVSIS Trigger: GGAGATCGAGACGCACATCGCTGTGCGCACCGGCAAGATTCTTGAATACAACAGCGACGGCGACTTCCTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172699.2 |
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