Pregenerated sensors for METTL7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025347Ensembl transcript IDs: ENSMUST00000026398.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATTaGGGTGACTTCTGGCTGCAGATGGGGAGATCAGATGGCATCCTT | + |
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Preference number: 1 (lower is better) Translates to: SLSHALPDPSLEVLY*GDFWLQMGRSDGIL Trigger: AAGGATGCCATCTGATCTCCCCATCTGCAGCCAGAAGTCACCCCAATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| 3UTR-3UTR TCA 90 bp | CTGATGAATGATCACCCTGGCAGCGGCAGCGGCGGCGCTGAGAGTCTCTCTCATAGTACTGTATTGGGGTaGCTTCTGGCTGCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LMNDHPGSGSGGAESLSHSTVLG*LLAADG Trigger: CCCATCTGCAGCCAGAAGTCACCCCAATACAGTACT...ATGAGAGAGACTCTCAGCGCCGCCGCTGCCGCTGCCAGGGTGATCATTCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGCGGCAGCGGCGGCGCTGAGAGTCTCTCTCATGCTTTACCTGACCCCTTTAGAAGTACTGTATTaGGGTGACTTCTGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LAAAAAALRVSLMLYLTPLEVLY*GDFWLQ Trigger: CTGCAGCCAGAAGTCACCCCAATACAGTACTTCTAA...AGGGGTCAGGTAAAGCATGAGAGAGACTCTCAGCGCCGCCGCTGCCGCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATTGGGGTACTTCTGGCTGCAGATaGGGAGATCAGATGGCATCC | + |
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Preference number: 2 (lower is better) Translates to: ESLSHALPDPSLEVLYWGTSGCR*GDQMAS Trigger: GGATGCCATCTGATCTCCCCATCTGCAGCCAGAAGT...ACCCCAATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| 3UTR CCA 72 bp | CATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATTaGGGTGACTTCTGGCTGCAGATGGGGAGATCAGAT | + |
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Preference number: 3 (lower is better) Translates to: HALPDPSLEVLY*GDFWLQMGRSD Trigger: ATCTGATCTCCCCATCTGCAGCCAGAAGTCACCCCAATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | CTGATGAATGATCACCCTGGCAGCGGCAGCGGCGGCGCTGAGAGTCTCTCTCATGTCTCTCTGGTGAGGTaGCAACCATCTCCGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: LMNDHPGSGSGGAESLSHVSLVR*QPSPMC Trigger: ACACATCGGAGATGGTTGCCACCTCACCAGAGAGAC...ATGAGAGAGACTCTCAGCGCCGCCGCTGCCGCTGCCAGGGTGATCATTCATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | GGCGCTGAGAGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATGGAAGTTGGCACCGGTaGCGCAGCCCAGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GAESLSHALPDPSLEVLYGSWHR*RSPAPA Trigger: TGCTGGAGCTGGGCTGCGGCACCGGTGCCAACTTCC...ATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACTCTCAGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | ATGATCACCCTGGCAGCGGCAGCGGCGGCGCTGAGAGTCTCTCTCATGCTTTACATGAAGCGCTCATATTaGAGGTGCCTGTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: MITLAAAAAALRVSLMLYMKRSY*RCLFSA Trigger: GGCTGAGAACAGGCACCTCCAATATGAGCGCTTCAT...GTAAAGCATGAGAGAGACTCTCAGCGCCGCCGCTGCCGCTGCCAGGGTGATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGGACGCCAGGGAGAACTTTACCATAGGGACAAGAGAGAGGGAGAATCCAGGTCTCTCTGGTaGGGTGGCAACCATCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VSEGRQGELYHRDKREGESRSLW*GGNHLR Trigger: TCGGAGATGGTTGCCACCTCACCAGAGAGACCTGGA...TTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTCTCCCTGGCGTCCTTCTGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | AGTTCCAAGGGGCCACATGGTGTAGTTTCAGAAGGACGCCAGGGAGAACTTTACGTTTTGCATATAGGCTaGCAGCAGCCCAGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSKGPHGVVSEGRQGELYVLHIG*QQPSRA Trigger: GGCTCTGCTGGGCTGCTGGCAGCCTATATGCAAAAC...GTAAAGTTCTCCCTGGCGTCCTTCTGAAACTACACCATGTGGCCCCTTGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCTTAGAAGTACTGTATTGGGGTGACTTCTGGCTGCAGATGGGGAGATCAGACCTTGCAGCCCTGTaGGTAGAACTGGAAGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSLEVLYWGDFWLQMGRSDLAAL*VELEVG Trigger: GCCAACTTCCAGTTCTACCCACAGGGCTGCAAGGTC...TGATCTCCCCATCTGCAGCCAGAAGTCACCCCAATACAGTACTTCTAAGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR TCA 90 bp | GAACTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGCAACAGGTAACCACCTaGAGGGAGGGGGCTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: ELYHRDKREGENGPRKGLQQVTT*REGAAI Trigger: AATGGCAGCCCCCTCCCTTCAGGTGGTTACCTGTTG...CAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR TCA 90 bp | AAGGACGCCAGGGAGAACTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCTCACAGCTTTTCCCATaGTGTGGGGCCCAACAGGTA | + |
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Preference number: 4 (lower is better) Translates to: KDARENFTIGTREREKTVSQLFP*CGAQQV Trigger: TACCTGTTGGGCCCCACATCATGGGAAAAGCTGTGA...GACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTCTCCCTGGCGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTAGAAGTACTGTATTGGGGTGACTTCTGGCTGCAGATGGGGAGATCAACCTTTCTGGGGCTCTaGACAGAACATAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSLEVLYWGDFWLQMGRSTFLGL*TEHSTR Trigger: CCTGGTGCTATGTTCTGTGCAGAGCCCCAGAAAGGT...TGATCTCCCCATCTGCAGCCAGAAGTCACCCCAATACAGTACTTCTAAGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | CTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGGGCCCTGCAGGACCTTTCTaGGGCTCTGCACAGAACATA | + |
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Preference number: 4 (lower is better) Translates to: LYHRDKREGENGPRKGLGPAGPF*GSAQNI Trigger: TATGTTCTGTGCAGAGCCCCAGAAAGGTCCTGCAGG...GCCCAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGAAGGACGCCAGGGAGAACTTTACCATAGGGACAAGAGAGAGGGAGAAGGCCTCAGGACTCTCTaGACTTCCTGCAGGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: VSEGRQGELYHRDKREGEGLRTL*TSCRTF Trigger: AAAGGTCCTGCAGGAAGTCCAGAGAGTCCTGAGGCC...TTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTCTCCCTGGCGTCCTTCTGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | GAACTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGACTCTCTGGACTTCCTaGAGGACCTTTCTGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ELYHRDKREGENGPRKGLTLWTS*RTFLGL Trigger: GAGCCCCAGAAAGGTCCTGCAGGAAGTCCAGAGAGT...CAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | GGCGCTGAGAGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATGGAACTTCTCGAAGTTaGGGTTTGGGTCCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: GAESLSHALPDPSLEVLYGTSRS*GLGPHR Trigger: CCTGTGTGGACCCAAACCCCAACTTCGAGAAGTTCC...ATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACTCTCAGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGAAGGACGCCAGGGAGAACTTTACCATAGGGACAAGAGAGAGGGAGAAGCTTTTCCCATGATGTaGGGCCCAACAGGTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: VSEGRQGELYHRDKREGEAFPMM*GPTGNH Trigger: GTGGTTACCTGTTGGGCCCCACATCATGGGAAAAGC...TTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTCTCCCTGGCGTCCTTCTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | GAGAGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATTGGGGTAGCAGCACCAGCAGCTaGAGAAATAGAACCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ESLSHALPDPSLEVLYWGSSTSS*RNRTRA Trigger: TGCCCTGGTTCTATTTCTGCAGCTGCTGGTGCTGCT...ACCCCAATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | CTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGGGCGCCTGTTCTCAGCCATaGTCTTTGTCAGGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LYHRDKREGENGPRKGLGACSQP*SLSGTS Trigger: AGAAGTTCCTGACAAAGAGCATGGCTGAGAACAGGC...GCCCAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR GCA 90 bp | GAGAGTCTCTCTCATGCTTTACCTGACCCCTCCTTAGAAGTACTGTATTGGGGTGACTTCGGAGAACTGTaGCCTCTCAATGTCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESLSHALPDPSLEVLYWGDFGEL*PLNVFP Trigger: TGGAAAGACATTGAGAGGGCACAGTTCTCCGAAGTC...ACCCCAATACAGTACTTCTAAGGAGGGGTCAGGTAAAGCATGAGAGAGACTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR TCA 90 bp | AATAAAATCTCTGGCTGCTTTATTGAGTGCCGCTCTCTCATCCTAAGGTTTTTCCTCCGTAAGCCACAATaGAGCGCTCATATTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: NKISGCFIECRSLILRFFLRKPQ*SAHIGG Trigger: ACCTCCAATATGAGCGCTTCATTGTGGCTTACGGAG...GAAAAACCTTAGGATGAGAGAGCGGCACTCAATAAAGCAGCCAGAGATTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CCA 90 bp | GAACTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGTTGAGATCTTTTATCTaGCTAAATAGTTCCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ELYHRDKREGENGPRKGLLRSFI*LNSSRF Trigger: GAAACGGGAACTATTTAGCCAGATAAAAGATCTCAA...CAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS TCA 90 bp | CAGGTAGGCTCTAAAACTCGCTGCCACAGGAAGGCCCGGCTTCCCTaGGGCTCAGCCACGTGCTCCCAGAAGAACAGTAGGCCTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QVGSKTRCHRKARLP*GSATCSQKNSRPPG Trigger: GCCGGGAGGCCTACTGTTCTTCTGGGAGCACGTGGCTGAGCCTCAGGGAAGCCGGGCCTTCCTGTGGCAGCGAGTTTTAGAGCCTACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS GCA 90 bp | CCCATGATGTGGGGCCCAACAGGTAACCACCTGAAGGGAGGGGGCTaGCATTCCAGCTGGACTTCGGAGAACTGTGCCCTCTCAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: PMMWGPTGNHLKGGG*HSSWTSENCALSMS Trigger: AGACATTGAGAGGGCACAGTTCTCCGAAGTCCAGCTGGAATGGCAGCCCCCTCCCTTCAGGTGGTTACCTGTTGGGCCCCACATCATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CCA 90 bp | ACGTGCTCCCAGAAGAACAGTAGGCCTCCCGGCCTCAGGACTCTCTaGACTTCCTGCAGGACCTTTCTGGGGCTCTGCACAGAACATAGC | + |
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Preference number: 5 (lower is better) Translates to: TCSQKNSRPPGLRTL*TSCRTFLGLCTEHS Trigger: GCTATGTTCTGTGCAGAGCCCCAGAAAGGTCCTGCAGGAAGTCCAGAGAGTCCTGAGGCCGGGAGGCCTACTGTTCTTCTGGGAGCACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS GCA 90 bp | CAGAAGAACAGTAGGCCTCCCGGCCTCAGGACTCTCTGGACTTCCTaGAGGACCTTTCTGGGGCTCTGCACAGAACATAGCACCAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: QKNSRPPGLRTLWTS*RTFLGLCTEHSTRV Trigger: TACCCTGGTGCTATGTTCTGTGCAGAGCCCCAGAAAGGTCCTGCAGGAAGTCCAGAGAGTCCTGAGGCCGGGAGGCCTACTGTTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CAA 90 bp | ATGATCACCCTGGCAGCGGCAGCGGCGGCGCTGAGAGTCTCTCTCATGCTTTACTCTCAGCCATGCTCTTaGTCAGGAACTTCTCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: MITLAAAAAALRVSLMLYSQPCS*SGTSRS Trigger: ACTTCGAGAAGTTCCTGACAAAGAGCATGGCTGAGA...GTAAAGCATGAGAGAGACTCTCAGCGCCGCCGCTGCCGCTGCCAGGGTGATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CAA 90 bp | CTTTACCATAGGGACAAGAGAGAGGGAGAAAACGGTCCTAGAAAGGGGTTGGGCAATGAAGCGCTCATATaGGAGGTGCCTGTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LYHRDKREGENGPRKGLGNEALI*EVPVLS Trigger: GCTGAGAACAGGCACCTCCAATATGAGCGCTTCATT...GCCCAACCCCTTTCTAGGACCGTTTTCTCCCTCTCTCTTGTCCCTATGGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS TCA 90 bp | TGGAGCTGTCAGCCAGTTGTTTCATGTTCTCTCCGTAAGCCACAATaGAGCGCTCATATTGGAGGTGCCTGTTCTCAGCCATGCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: WSCQPVVSCSLRKPQ*SAHIGGACSQPCSL Trigger: CAAAGAGCATGGCTGAGAACAGGCACCTCCAATATGAGCGCTTCATTGTGGCTTACGGAGAGAACATGAAACAACTGGCTGACAGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS-3UTR CAA 90 bp | AATAAAATCTCTGGCTGCTTTATTGAGTGCCGCTCTCTCATCCTAAGGTTTTTCAGGAACTTCTCGAAGTaGGGGTTTGGGTCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: NKISGCFIECRSLILRFFRNFSK*GFGSTQ Trigger: CTGTGTGGACCCAAACCCCAACTTCGAGAAGTTCCT...GAAAAACCTTAGGATGAGAGAGCGGCACTCAATAAAGCAGCCAGAGATTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CCA 72 bp | GGGGTTTGGGTCCACACAGGTGACCTTGCAGCCCTGTaGGTAGAACTGGAAGTTGGCACCGGTGCCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVWVHTGDLAAL*VELEVGTGAAA Trigger: GGCTGCGGCACCGGTGCCAACTTCCAGTTCTACCCACAGGGCTGCAAGGTCACCTGTGTGGACCCAAACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS GCA 72 bp | TGGGGCCCAACAGGTAACCACCTGAAGGGAGGGGGCTaGCATTCCAGCTGGACTTCGGAGAACTGTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WGPTGNHLKGGG*HSSWTSENCAL Trigger: GAGGGCACAGTTCTCCGAAGTCCAGCTGGAATGGCAGCCCCCTCCCTTCAGGTGGTTACCTGTTGGGCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS GCA 72 bp | AGTAGGCCTCCCGGCCTCAGGACTCTCTGGACTTCCTaGAGGACCTTTCTGGGGCTCTGCACAGAACATAGC | + |
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Preference number: 6 (lower is better) Translates to: SRPPGLRTLWTS*RTFLGLCTEHS Trigger: GCTATGTTCTGTGCAGAGCCCCAGAAAGGTCCTGCAGGAAGTCCAGAGAGTCCTGAGGCCGGGAGGCCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CCA 72 bp | CAGAAGAACAGTAGGCCTCCCGGCCTCAGGACTCTCTaGACTTCCTGCAGGACCTTTCTGGGGCTCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: QKNSRPPGLRTL*TSCRTFLGLCT Trigger: TGTGCAGAGCCCCAGAAAGGTCCTGCAGGAAGTCCAGAGAGTCCTGAGGCCGGGAGGCCTACTGTTCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CCA 72 bp | GGTAACCACCTGAAGGGAGGGGGCTGCCATTCCAGCTaGACTTCGGAGAACTGTGCCCTCTCAATGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GNHLKGGGCHSS*TSENCALSMSF Trigger: GAAAGACATTGAGAGGGCACAGTTCTCCGAAGTCCAGCTGGAATGGCAGCCCCCTCCCTTCAGGTGGTTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CAA 90 bp | GTGCCGCAGCCCAGCTCCAGCAGGGCCACGTTGCCGGAAGTCCCCTaGAGATCTTTTATCTGGCTAAATAGTTCCCGTTTCTTGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VPQPSSSRATLPEVP*RSFIWLNSSRFLLS Trigger: GGAAAGCAAGAAACGGGAACTATTTAGCCAGATAAAAGATCTCAAGGGGACTTCCGGCAACGTGGCCCTGCTGGAGCTGGGCTGCGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CAA 72 bp | CCCAGCTCCAGCAGGGCCACGTTGCCGGAAGTCCCCTaGAGATCTTTTATCTGGCTAAATAGTTCCCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSSSRATLPEVP*RSFIWLNSSRF Trigger: GAAACGGGAACTATTTAGCCAGATAAAAGATCTCAAGGGGACTTCCGGCAACGTGGCCCTGCTGGAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS TCA 72 bp | CAGCCAGTTGTTTCATGTTCTCTCCGTAAGCCACAATaGAGCGCTCATATTGGAGGTGCCTGTTCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPVVSCSLRKPQ*SAHIGGACSQP Trigger: TGGCTGAGAACAGGCACCTCCAATATGAGCGCTTCATTGTGGCTTACGGAGAGAACATGAAACAACTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CAA 72 bp | CATGTTCTCTCCGTAAGCCACAATGAAGCGCTCATATaGGAGGTGCCTGTTCTCAGCCATGCTCTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HVLSVSHNEALI*EVPVLSHALCQ Trigger: CTGACAAAGAGCATGGCTGAGAACAGGCACCTCCAATATGAGCGCTTCATTGTGGCTTACGGAGAGAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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| CDS CAA 90 bp | CAGTTGTTTCATGTTCTCTCCGTAAGCCACAATGAAGCGCTCATATaGGAGGTGCCTGTTCTCAGCCATGCTCTTTGTCAGGAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QLFHVLSVSHNEALI*EVPVLSHALCQELL Trigger: GAGAAGTTCCTGACAAAGAGCATGGCTGAGAACAGGCACCTCCAATATGAGCGCTTCATTGTGGCTTACGGAGAGAACATGAAACAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026398.5 |
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