Pregenerated sensors for METTL7A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056487Ensembl transcript IDs: ENSMUST00000088142.6, ENSMUST00000176287.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCAAGCTGTAAGTCTCCCCCACTGCTTCCTTTTCAAAGGCCTATaGGAGACCTTCGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LQAVSLPHCFLFKGL*ETFGPFGGRVQSCS Trigger: AGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCGAAGGTCTCTCATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR TCA 90 bp | TCGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCTGATTTGGTTTTaGTTCGGTAAGAAACAACATAGAAAATGGCTAAACAGAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SVPLEGEFKAALIWF*FGKKQHRKWLNRNL Trigger: CAGGTTTCTGTTTAGCCATTTTCTATGTTGTTTCTTACCGAATCAAAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCGTGCAGGACAATGCAGCAGCCAGTGGCAAAACCCTGAGCCGAAGGACATCCTTCTTACCGGGATaGGGGAGGGAAGGAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CGVQDNAAASGKTLSRRTSFLPG*GREGGV Trigger: AACACCTCCTTCCCTCCCCCATCCCGGTAAGAAGGA...TGTCCTTCGGCTCAGGGTTTTGCCACTGGCTGCTGCATTGTCCTGCACGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGCAGGACAATGCAGCAGCCAGTGGCAAAACCCTGAGCCGAAGGACAGGCCATGGCTAGAGCACAGGTaGCAGCCAAAGCAGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: RAGQCSSQWQNPEPKDRPWLEHR*QPKQTS Trigger: ACTAGTCTGCTTTGGCTGCCACCTGTGCTCTAGCCA...TGGCCTGTCCTTCGGCTCAGGGTTTTGCCACTGGCTGCTGCATTGTCCTGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR TCA 90 bp | CGTGCAGGACAATGCAGCAGCCAGTGGCAAAACCCTGAGCCGAAGGACAGGCCAATAGCAAGTGGGTTCTaGTTCCTTCTTACCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RAGQCSSQWQNPEPKDRPIASGF*FLLTGM Trigger: CATCCCGGTAAGAAGGAATCAGAACCCACTTGCTAT...TGGCCTGTCCTTCGGCTCAGGGTTTTGCCACTGGCTGCTGCATTGTCCTGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTACCTGAGAGCTGGGATTaGGGCTCTGCCACCAACCAC | + |
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Preference number: 2 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVPESWD*GSATNH Trigger: GTGGTTGGTGGCAGAGCCTCAATCCCAGCTCTCAGG...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTACCTACCTCTGCCACCTaGGAGCTGGGATTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVPTSAT*ELGLRL Trigger: GAGCCTCAATCCCAGCTCTCAGGTGGCAGAGGTAGG...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTACAATGCAGCAGCCAGTaGCAAAACCCTGAGCCGAAG | + |
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Preference number: 2 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVQCSSQ*QNPEPK Trigger: CTTCGGCTCAGGGTTTTGCCACTGGCTGCTGCATTG...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAATACAGGGTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTATCTAAAACGGAAGCCTaGAACCAGCGTGGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LQYRVYLCSPGGPGTPSVSKTEA*NQRGAD Trigger: GTCTGCTCCACGCTGGTTCCAGGCTTCCGTTTTAGA...TACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAACCCTGTATTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTAATAGCAAGTGGGTTCTaGTTCCTTCTTACCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVIASGF*FLLTGM Trigger: CATCCCGGTAAGAAGGAATCAGAACCCACTTGCTAT...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTGCAGTTCTGTGATTCCTTCTTACCGGGATaGGGGAGGGAAGGAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IRWEIKQRIPICSVQFCDSFLPG*GREGGV Trigger: AACACCTCCTTCCCTCCCCCATCCCGGTAAGAAGGA...ATCACAGAACTGCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTGCAGTTCTGTGATTCTAAAACGGAAGCCTaGAACCAGCGTGGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: IRWEIKQRIPICSVQFCDSKTEA*NQRGAD Trigger: GTCTGCTCCACGCTGGTTCCAGGCTTCCGTTTTAGA...ATCACAGAACTGCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTGCAGTTCTGTGATTGTGTTAGTCAGCCGTaGATTTTCCATTTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: IRWEIKQRIPICSVQFCDCVSQP*IFHFLG Trigger: TCCCAGAAAATGGAAAATCCACGGCTGACTAACACA...ATCACAGAACTGCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR CCA 72 bp | ATGACGCTGGTGTGTCAGGTGCACTTATACAAGCTGTaGCGTGCAGGACAATGCAGCAGCCAGTGGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: MTLVCQVHLYKL*RAGQCSSQWQN Trigger: GTTTTGCCACTGGCTGCTGCATTGTCCTGCACGCCACAGCTTGTATAAGTGCACCTGACACACCAGCGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR TCA 72 bp | GTAAGTCTCCCCCACTGCTTCCTTTTCAAAGGCCTATaGGAGACCTTCGGTCCCTTTGGAGGGAGAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: VSLPHCFLFKGL*ETFGPFGGRVQ Trigger: TTGAACTCTCCCTCCAAAGGGACCGAAGGTCTCTCATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR GCA 72 bp | GATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTaGAGTTCTGTGATGACGCTGGTGTGTCAGGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: DGKLNREFPSVL*SSVMTLVCQVH Trigger: GTGCACCTGACACACCAGCGTCATCACAGAACTGCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| 3UTR TCA 72 bp | CTTCGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCTaGTTTGGTTTTGATTCGGTAAGAAACAACATAGAA | + |
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Preference number: 3 (lower is better) Translates to: LRSLWRESSKLL*FGFDSVRNNIE Trigger: TTCTATGTTGTTTCTTACCGAATCAAAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | CAGGACAATGCAGCAGCCAGTGGCAAAACCCTGAGCCGAAGGACAGGCCACTGGGGGGCCTGGATGTGCTaGAGGTTCAGCTTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QDNAAASGKTLSRRTGHWGAWMC*RFSLEK Trigger: CTTCTCCAAGCTGAACCTGCAGCACATCCAGGCCCC...CCAGTGGCCTGTCCTTCGGCTCAGGGTTTTGCCACTGGCTGCTGCATTGTCCTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | CTAGAGCACAGGTGGCAGCCAAAGCAGACTAGTAACACCAGGATAGCAAGTGGGAAGGGGAGCGGGGCCTaGATGTGCTGCAGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LEHRWQPKQTSNTRIASGKGSGA*MCCRFS Trigger: GCTGAACCTGCAGCACATCCAGGCCCCGCTCCCCTT...CCCACTTGCTATCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | TCTGATTCCTTCTTACCGGGATGGGGGAGGGAAGGAGGTGTTCCTGTGTTAGTCAGCGGGGCCTGGATGTaGTGCAGGTTCAGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SDSFLPGWGREGGVPVLVSGAWM*CRFSLE Trigger: CTCCAAGCTGAACCTGCAGCACATCCAGGCCCCGCT...GACTAACACAGGAACACCTCCTTCCCTCCCCCATCCCGGTAAGAAGGAATCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTAAAGGGGAGCGGGGCCTaGATGTGCTGCAGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVKGSGA*MCCRFS Trigger: GCTGAACCTGCAGCACATCCAGGCCCCGCTCCCCTT...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | ATTCGGTTTGCAAGCTGTAAGTCTCCCCCACTGCTTCCTTTTCAAAGGCCTATGAGCGGGGCCTGGATGTaGTGCAGGTTCAGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IRFASCKSPPLLPFQRPMSGAWM*CRFSLE Trigger: CTCCAAGCTGAACCTGCAGCACATCCAGGCCCCGCT...CATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCAAACCGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | TTACCGGGATGGGGGAGGGAAGGAGGTGTTCCTGTGTTAGTCAGCCGTGGATTTAGGGAAAGCACTTTTTaGATACCCAGCTCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: LPGWGREGGVPVLVSRGFRESTF*IPSSTC Trigger: GCATGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCT...AAATCCACGGCTGACTAACACAGGAACACCTCCTTCCCTCCCCCATCCCGGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | CTAGAGCACAGGTGGCAGCCAAAGCAGACTAGTAACACCAGGATAGCAAGTGGGATACCCAGCTCCACATaGCTAGAAGGTTCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LEHRWQPKQTSNTRIASGIPSST*LEGSAE Trigger: TTCTGCTGAACCTTCTAGGCATGTGGAGCTGGGTAT...CCCACTTGCTATCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | TATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTACTCCCTTCCAGCTCTCTCTaGTCAGATTGCATCCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: YLCSPGGPGTPSVDQAVLPSSSL*SDCIRQ Trigger: TTGACGGATGCAATCTGACCAGAGAGAGCTGGAAGG...GAGTACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | AGCTGTAAGTCTCCCCCACTGCTTCCTTTTCAAAGGCCTATGAGAGACCTTCGGAGGGAAAGCACTTTTTaGATACCCAGCTCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: SCKSPPLLPFQRPMRDLRRESTF*IPSSTC Trigger: GCATGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCT...CCGAAGGTCTCTCATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGAATTTTACATCTAAAACGGAAGCCTGGAACCAGCGTGGAGCAGACCGGCCTTCCAGCTCTCTCTaGTCAGATTGCATCCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SENFTSKTEAWNQRGADRPSSSL*SDCIRQ Trigger: TTGACGGATGCAATCTGACCAGAGAGAGCTGGAAGG...CCGGTCTGCTCCACGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATTCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | AATTTTACATCTAAAACGGAAGCCTGGAACCAGCGTGGAGCAGACCGGATCTCTGCTGCAGGTTCAGCTTaGAGAAGTTGGCCTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: NFTSKTEAWNQRGADRISAAGSA*RSWPAL Trigger: TAGAGCAGGCCAACTTCTCCAAGCTGAACCTGCAGC...AGAGATCCGGTCTGCTCCACGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR GCA 90 bp | GTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGATCAGGCTGTAATACCCAGCTCCACATaGCTAGAAGGTTCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VYLCSPGGPGTPSVDQAVIPSST*LEGSAE Trigger: TTCTGCTGAACCTTCTAGGCATGTGGAGCTGGGTAT...TACAGCCTGATCTACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | CTTCAATACAGGGTTTATTTGTGTAGCCCTGGCGGTCCTGGAACTCCATCTGTAGGTTCAGCAGAAACATaGGAAACGCCACGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LQYRVYLCSPGGPGTPSVGSAET*ETPRCR Trigger: TCTGCATCGTGGCGTTTCCCATGTTTCTGCTGAACC...TACAGATGGAGTTCCAGGACCGCCAGGGCTACACAAATAAACCCTGTATTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS-3UTR CCA 90 bp | ATAAGATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTGCAGTTCTGTGATGGTTCAGCAGAAACATaGGAAACGCCACGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IRWEIKQRIPICSVQFCDGSAET*ETPRCR Trigger: TCTGCATCGTGGCGTTTCCCATGTTTCTGCTGAACC...ATCACAGAACTGCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 90 bp | ACCTGGTGCATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCGACGCTCTTGAACAAGAACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TWCMSSPAATTKRSN*SCRFSATLLNKNFS Trigger: TGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACATGCACCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 90 bp | AGCGGGGCCTGGATGTGCTGCAGGTTCAGCTTGGAGAAGTTGGCCTaGTCTATGGCCTTCCAGCTCTCTCTGGTCAGATTGCATCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SGAWMCCRFSLEKLA*SMAFQLSLVRLHPS Trigger: TGACGGATGCAATCTGACCAGAGAGAGCTGGAAGGCCATAGAGCAGGCCAACTTCTCCAAGCTGAACCTGCAGCACATCCAGGCCCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 90 bp | AGCCAGGACCTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACATGGTCTATGAAGTAAAAAGCCCCTCCCGGCTTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SQDLLPEVIPGRPFI*HMVYEVKSPSRLQH Trigger: GTGCTGAAGCCGGGAGGGGCTTTTTACTTCATAGACCATGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAGGTCCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088142.6 |
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| CDS GCA 90 bp | AGCCAGGACCTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACATGGTCTATGAAGTAAAAAGCCCTCACCGGCTTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SQDLLPEVIPGRPFI*HMVYEVKSPHRLQH Trigger: GTGCTGAAGCCGGTGAGGGCTTTTTACTTCATAGACCATGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAGGTCCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176287.2 |
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| CDS GCA 90 bp | GCTTCAGGAAGTAGGGAAAGCACTTTTTGCATACCCAGCTCCACATaGCTAGAAGGTTCAGCAGAAACATGGGAAACGCCACGATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ASGSRESTFCIPSST*LEGSAETWETPRCR Trigger: TCTGCATCGTGGCGTTTCCCATGTTTCTGCTGAACCTTCTAGGCATGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCTACTTCCTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 90 bp | TGTATATCATGGCGAACCGCTTCAGGAAGTAGGGAAAGCACTTTTTaGATACCCAGCTCCACATGCCTAGAAGGTTCAGCAGAAACATGG | + |
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Preference number: 5 (lower is better) Translates to: CISWRTASGSRESTF*IPSSTCLEGSAETW Trigger: CCATGTTTCTGCTGAACCTTCTAGGCATGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCTACTTCCTGAAGCGGTTCGCCATGATATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 72 bp | GGCCGCACCAAGGTCAAGGGGAGCGGGGCCTGGATGTaGTGCAGGTTCAGCTTGGAGAAGTTGGCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRTKVKGSGAWM*CRFSLEKLACS Trigger: AGAGCAGGCCAACTTCTCCAAGCTGAACCTGCAGCACATCCAGGCCCCGCTCCCCTTGACCTTGGTGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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| CDS GCA 72 bp | TGGATGTGCTGCAGGTTCAGCTTGGAGAAGTTGGCCTaGTCTATGGCCTTCCAGCTCTCTCTGGTCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: WMCCRFSLEKLA*SMAFQLSLVRL Trigger: CAATCTGACCAGAGAGAGCTGGAAGGCCATAGAGCAGGCCAACTTCTCCAAGCTGAACCTGCAGCACATCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088142.6 ENSMUST00000176287.2 |
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