Pregenerated sensors for METTL7A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054619Ensembl transcript IDs: ENSMUST00000067752.5, ENSMUST00000229217.2, ENSMUST00000229574.2, ENSMUST00000229588.2, ENSMUST00000230018.2, ENSMUST00000230252.2, ENSMUST00000230472.2, ENSMUST00000231166.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTCTCTCTCTGCCTCTCTCTCTGCCCCTCTGCCTCTGCCTCCTaGGTGCTGGGACTAAGGCTGAACCACCACACCCACTCAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: CLSLCLSLCPSASAS*VLGLRLNHHTHSGP Trigger: TGGTCCTGAGTGGGTGTGGTGGTTCAGCCTTAGTCCCAGCACTCAGGAGGCAGAGGCAGAGGGGCAGAGAGAGAGGCAGAGAGAGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 90 bp | CAGGCTGTACTCAAGGATATCTACCTGTCTCTGCCTCTGTCTCTCTaGCTCTCTCTCTGCCTCTCTCTCTGCCCCTCTGCCTCTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: QAVLKDIYLSLPLSL*LSLCLSLCPSASAS Trigger: GGAGGCAGAGGCAGAGGGGCAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGACAGAGGCAGAGACAGGTAGATATCCTTGAGTACAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 90 bp | GCAGCAGCCATTGGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTaGCCAGAGCACAGGTGGCAGCCAAAGCAGACTAGTAACACCAGG | + |
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Preference number: 1 (lower is better) Translates to: AAAIGKTLSQRTESH*PEHRWQPKQTSNTR Trigger: CCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCCAATGGCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 90 bp | CTGGTGTGTCAGGTGCACTTATACGAGCTGTGGCGTGCAGGACAATaGAGCAGCCATTGGCAAAACCCTGAGCCAAAGGACAGAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LVCQVHLYELWRAGQ*SSHWQNPEPKDREP Trigger: TGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCCAATGGCTGCTGCATTGTCCTGCACGCCACAGCTCGTATAAGTGCACCTGACACACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 90 bp | AAAACCCTGAGCCAAAGGACAGAGAGCCACTGGCCAGAGCACAGGTaGCAGCCAAAGCAGACTAGTAACACCAGGATAGCAAGTGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: KTLSQRTESHWPEHR*QPKQTSNTRIASGF Trigger: GAACCCACTTGCTATCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 90 bp | ATCCAGGACCTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACGTGTTCCATGAAGTAAAAAGCCCCTCCCGGCTTCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: IQDLLPEVIPGRPFI*HVFHEVKSPSRLQH Trigger: GTGCTGAAGCCGGGAGGGGCTTTTTACTTCATGGAACACGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAGGTCCTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| 3UTR TCA 90 bp | TTGCAAGCTGTAAGTCTCCCCCACTGCTTCCTTTTCCAAGGCCTATaGGAGACCTTTGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LQAVSLPHCFLFQGL*ETFGPFGGRVQSCS Trigger: AGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGGCCTTGGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 90 bp | CCAAAGCTCAGCAGTCAGTTGCGTTGGCAAAAAGAGTCCATCTGTTaGTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: PKLSSQLRWQKESIC*WKVPSLSSLVQRLS Trigger: AGACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR CCA 90 bp | CTCACTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAGTTGCGTTaGCAAAAAGAGTCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LTVMVLSPKLSSQLR*QKESICCWKVPSLS Trigger: AGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGACAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR GCA 90 bp | ATCCAGGACCTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACGTGTTCCATGAAGTAAAAAGCCCCTCCATATGTGTATGG | + |
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Preference number: 1 (lower is better) Translates to: IQDLLPEVIPGRPFI*HVFHEVKSPSICVW Trigger: CCATACACATATGGAGGGGCTTTTTACTTCATGGAACACGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAGGTCCTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230018.2 |
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| 3UTR CCA 90 bp | GAAGGAGGTGTTCCTGTGTTAGTCAGCCGTGGATTTCCCATTTTCTaGGATTTATTTATTCGGTTTGCAAGCTGTAAGTCTCCCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: EGGVPVLVSRGFPIF*DLFIRFASCKSPPL Trigger: CAGTGGGGGAGACTTACAGCTTGCAAACCGAATAAATAAATCCCAGAAAATGGGAAATCCACGGCTGACTAACACAGGAACACCTCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 90 bp | TCCATACATACAAATGCAGCTGAAACCCTTGGGCCCACCCAGACTTaGTCTCTGTATGAACACAATGATATCCATGGTTTTGTTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SIHTNAAETLGPTQT*SLYEHNDIHGFVSG Trigger: TCCTGAAACAAAACCATGGATATCATTGTGTTCATACAGAGAGCAAGTCTGGGTGGGCCCAAGGGTTTCAGCTGCATTTGTATGTATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR-3UTR TCA 90 bp | AAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACCTGCCACGTGTTCCATaGAGTAAAAAGCCCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: KRKPGTSSEQTGSLPPPHLPRVP*SKKPLP Trigger: CGGGAGGGGCTTTTTACTTCATGGAACACGTGGCAG...GTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTCTATTTCACAGCATAGCCATAGATGTGGGGCCGCACCAATGTCCAGGCTGCCACGTGTTCCATaGAGTAAAAAGCCCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: PHSISQHSHRCGAAPMSRLPRVP*SKKPLP Trigger: CGGGAGGGGCTTTTTACTTCATGGAACACGTGGCAG...CCTGGACATTGGTGCGGCCCCACATCTATGGCTATGCTGTGAAATAGAGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| 3UTR-3UTR GCA 90 bp | TTACCGGGTTGGGGGAGGGAAGGAGGTGTTCCTGTGTTAGTCAGCCGTGGATTTGTAAGTCTCCCCCACTaGTTCCTTTTCCAAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPGWGREGGVPVLVSRGFVSLPH*FLFQGL Trigger: TAGGCCTTGGAAAAGGAAGCAGTGGGGGAGACTTAC...AAATCCACGGCTGACTAACACAGGAACACCTCCTTCCCTCCCCCAACCCGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCTGCCTCTGCCTCCTGAGTGCTGGGACTAAGGCTGAACCACCACACCCAAGTTCAAAGCTGCTCTaGTTTGGTTTTGATTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: PLCLCLLSAGTKAEPPHPSSKLL*FGFDSV Trigger: TACTGAATCAAAACCAAATCAGAGCAGCTTTGAACT...TGGGTGTGGTGGTTCAGCCTTAGTCCCAGCACTCAGGAGGCAGAGGCAGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CAA 90 bp | CCCAAAGCTCAGCAGTCAGTTGCGTTGGCAAAAAGAGTCCATCTGTaGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: PKAQQSVALAKRVHL*LEGPKSVFFGSALV Trigger: GACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCCTGCCACGTGTTCCATaGAGTAAAAAGCCCCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CSFSFEKLACSMVFQLSLLPRVP*SKKPLH Trigger: ATGGAGGGGCTTTTTACTTCATGGAACACGTGGCAG...GAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230018.2 |
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| 3UTR CAA 90 bp | GCTTTCCTCACTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAGTaGCGTTGGCAAAAAGAGTCCATCTGTTGCTGGAAGGTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AFLTVMVLSPKLSSQ*RWQKESICCWKVPS Trigger: ACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGACAGTGAGGAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCAGATTGCAGAAATCACTCCTTCTaGATGAAAAATGAGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: ASRSWPALWSSSSLSSDCRNHSF*MKNELQ Trigger: TTGGAGCTCATTTTTCATCCAGAAGGAGTGATTTCT...GCAATCTGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230018.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGACATTATGCTTTCCTCACTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAAGTCTGTCTTCTTTaGTTCAGCGCTTGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VRHYAFLTVMVLSPKLSSQVCLL*FSACLR Trigger: CCTGAGACAAGCGCTGAACCAAAGAAGACAGACTTG...ACTGCTGAGCTTTGGGGAAAGTACCATGACAGTGAGGAAAGCATAATGTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTCCTGTGTTAGTCAGCCGTGGATTTCCCATTTTCTGGGATTTATTTATTCCTATGAGAGACCTTTaGTCCCTTTGGAGGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVPVLVSRGFPIFWDLFIPMRDL*SLWRES Trigger: ACTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGG...AATAAATAAATCCCAGAAAATGGGAAATCCACGGCTGACTAACACAGGAACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR TCA 72 bp | CTCTGCCTCTCTCTCTGCCCCTCTGCCTCTGCCTCCTaGGTGCTGGGACTAAGGCTGAACCACCACACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LCLSLCPSASAS*VLGLRLNHHTH Trigger: GTGGGTGTGGTGGTTCAGCCTTAGTCCCAGCACTCAGGAGGCAGAGGCAGAGGGGCAGAGAGAGAGGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR-3UTR CAA 90 bp | GGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTGGCCAGAGCACAGGTGGCAGTTCCTTCTTACCGGGTaGGGGGAGGGAAGGAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GKTLSQRTESHWPEHRWQFLLTG*GEGRRC Trigger: ACACCTCCTTCCCTCCCCCAACCCGGTAAGAAGGAA...CTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 72 bp | TCTCTGCCTCTCTCTCTGCCTCTCTCTCTGCCCCTCTaGCTCTGCCTCCTGAGTGCTGGGACTAAGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SLPLSLPLSLPL*LCLLSAGTKAE Trigger: TTCAGCCTTAGTCCCAGCACTCAGGAGGCAGAGGCAGAGGGGCAGAGAGAGAGGCAGAGAGAGAGGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR-3UTR CAA 90 bp | GGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTGGCCAGAGCACAGGTGGCAGGCCTATGAGAGACCTTaGGTCCCTTTGGAGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GKTLSQRTESHWPEHRWQAYERP*VPLEGE Trigger: CTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGGC...CTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR TCA 72 bp | GCGTGCAGGACAATGCAGCAGCCATTGGCAAAACCCTaGGCCAAAGGACAGAGAGCCACTGGCCAGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: ACRTMQQPLAKP*AKGQRATGQST Trigger: TGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCCAATGGCTGCTGCATTGTCCTGCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 72 bp | CTCAAGGATATCTACCTGTCTCTGCCTCTGTCTCTCTaGCTCTCTCTCTGCCTCTCTCTCTGCCCCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: LKDIYLSLPLSL*LSLCLSLCPSA Trigger: GGCAGAGGGGCAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGACAGAGGCAGAGACAGGTAGATATCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 72 bp | CAGGTGCACTTATACGAGCTGTGGCGTGCAGGACAATaGAGCAGCCATTGGCAAAACCCTGAGCCAAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: QVHLYELWRAGQ*SSHWQNPEPKD Trigger: GTCCTTTGGCTCAGGGTTTTGCCAATGGCTGCTGCATTGTCCTGCACGCCACAGCTCGTATAAGTGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 72 bp | ATTGGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTaGCCAGAGCACAGGTGGCAGCCAAAGCAGACTAGT | + |
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Preference number: 3 (lower is better) Translates to: IGKTLSQRTESH*PEHRWQPKQTS Trigger: ACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 72 bp | GGGCCTGGATGTGCTGTAGCTTTAGCTTCGAGAAGCTaGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCA | + |
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Preference number: 3 (lower is better) Translates to: GPGCAVALASRS*PALWSSSSLSS Trigger: TGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACAGCACATCCAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| 3UTR TCA 72 bp | AAGCAGACTAGTAACACCAGGATAGCAAGTGGGTTCTaGTTCCTTCTTACCGGGTTGGGGGAGGGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KQTSNTRIASGF*FLLTGLGEGRR Trigger: CCTCCTTCCCTCCCCCAACCCGGTAAGAAGGAATCAGAACCCACTTGCTATCCTGGTGTTACTAGTCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 72 bp | CTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACGTGTTCCATGAAGTAAAAAGCCCCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: LLPEVIPGRPFI*HVFHEVKSPSR Trigger: CCGGGAGGGGCTTTTTACTTCATGGAACACGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| 3UTR TCA 72 bp | GTAAGTCTCCCCCACTGCTTCCTTTTCCAAGGCCTATaGGAGACCTTTGGTCCCTTTGGAGGGAGAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: VSLPHCFLFQGL*ETFGPFGGRVQ Trigger: TTGAACTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGGCCTTGGAAAAGGAAGCAGTGGGGGAGACTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 72 bp | GCTGTAGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATaGTCTTCCAGCTCTCTCTCGTCAGATTGCATCCAT | + |
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Preference number: 3 (lower is better) Translates to: AVALASRSWPAL*SSSSLSSDCIH Trigger: ATGGATGCAATCTGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATTCCCATCTGTTCTGTGGAGTTCTGTGATGACGCTGGTGTGTCAGGTGCAAGACCTTTGGTCCCTTaGGAGGGAGAGTTCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: RIPICSVEFCDDAGVSGARPLVP*EGEFKA Trigger: AGCTTTGAACTCTCCCTCCAAAGGGACCAAAGGTCT...TGCACCTGACACACCAGCGTCATCACAGAACTCCACAGAACAGATGGGAATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR GCA 72 bp | CTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAGTTaGGTTGGCAAAAAGAGTCCATCTGTTGCTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LSWYFPQSSAVS*VGKKSPSVAGR Trigger: CCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR CCA 72 bp | AGTCAGTTGCGTTGGCAAAAAGAGTCCATCTGTTGCTaGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGC | + |
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Preference number: 3 (lower is better) Translates to: SQLRWQKESICC*KVPSLSSLVQR Trigger: GCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR GCA 72 bp | AGCAGTCAGTTGCGTTGGCAAAAAGAGTCCATCTGTTaGTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: SSQLRWQKESIC*WKVPSLSSLVQ Trigger: CTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR GCA 72 bp | CTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTaGCACGTGTTCCATGAAGTAAAAAGCCCCTCCATA | + |
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Preference number: 3 (lower is better) Translates to: LLPEVIPGRPFI*HVFHEVKSPSI Trigger: TATGGAGGGGCTTTTTACTTCATGGAACACGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230018.2 |
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| 3UTR CCA 72 bp | GGGGAGGGAAGGAGGTGTTCCTGTGTTAGTCAGCCGTaGATTTCCCATTTTCTGGGATTTATTTATTCGGTT | + |
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Preference number: 3 (lower is better) Translates to: GEGRRCSCVSQP*ISHFLGFIYSV Trigger: AACCGAATAAATAAATCCCAGAAAATGGGAAATCCACGGCTGACTAACACAGGAACACCTCCTTCCCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 72 bp | GATGGGAAATTAAACAGAGAATTCCCATCTGTTCTGTaGAGTTCTGTGATGACGCTGGTGTGTCAGGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: DGKLNREFPSVL*SSVMTLVCQVH Trigger: GTGCACCTGACACACCAGCGTCATCACAGAACTCCACAGAACAGATGGGAATTCTCTGTTTAATTTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR-3UTR CAA 90 bp | TTAGACATTATGCTTTCCTCACTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAAAAGAGTCCATCTGTaGCTGGAAGGTCCCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LDIMLSSLSWYFPQSSAVKRVHL*LEGPKS Trigger: AGACTTGGGACCTTCCAGCAACAGATGGACTCTTTT...GACTGCTGAGCTTTGGGGAAAGTACCATGACAGTGAGGAAAGCATAATGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACTGTTCCATGGGTAGTACAATTTGAGAGTAATAACATCCATTTGAACAGCCCAAGTCTGTCTTCTTaGGTTCAGCGCTTGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LTVPWVVQFESNNIHLNSPSLSS*VQRLSQ Trigger: CTGAGACAAGCGCTGAACCAAAGAAGACAGACTTGG...GCTGTTCAAATGGATGTTATTACTCTCAAATTGTACTACCCATGGAACAGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| 3UTR TCA 72 bp | CTTTGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCTaGTTTGGTTTTGATTCAGTAAGAAACAACATAGAA | + |
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Preference number: 3 (lower is better) Translates to: LWSLWRESSKLL*FGFDSVRNNIE Trigger: TTCTATGTTGTTTCTTACTGAATCAAAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CCA 72 bp | GAAGGCAAGAGATTGTACAGTCAATTAACTGTTCCATaGGTAGTACAATTTGAGAGTAATAACATCCATTTG | + |
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Preference number: 3 (lower is better) Translates to: EGKRLYSQLTVP*VVQFESNNIHL Trigger: CAAATGGATGTTATTACTCTCAAATTGTACTACCCATGGAACAGTTAATTGACTGTACAATCTCTTGCCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR GCA 90 bp | CGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACTCTCCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RKPGTSSEQTGSLPPPHSPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...AGAGTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | AAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACCCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKPGTSSEQTGSLPPPHPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...GTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | AAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKPGTSSEQTGSLPPPHRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...GTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | AAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCAGGGCCGGCGAACTCCTaGAGATTGCTGAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTEAWNQLGADRISPTTSGPANS*RLLKSS Trigger: GGAGCTCTTCAGCAATCTGCAGGAGTTCGCCGGCCC...TGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKTEAWNQLGADRISPTTTKRSN*SCRFSA Trigger: CGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGT...GGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR TCA 90 bp | AAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACACTCCTGCAGATTGCTaGAGAGCTCCCGCTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKPGTSSEQTGSLPPPHTPADC*RAPAFG Trigger: GCCAAAAGCGGGAGCTCTTCAGCAATCTGCAGGAGT...GTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGGAGCAGACCGGATCTCTCCCACCACCTCACTCTATTTCACAGCATAGCCCAGCTGCCGGTTCTCTaGGACGCTCTCCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSRPDLSHHLTLFHSIAQLPVL*DALQQS Trigger: ACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTG...GGCTATGCTGTGAAATAGAGTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229574.2 |
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| CDS-3UTR CCA 90 bp | AAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACAGCTGGCCTGCTCTATaGTCTTCCAGCTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKPGTSSEQTGSLPPPHSWPAL*SSSSLS Trigger: CGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCT...GTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 |
||
| CDS-3UTR GCA 90 bp | TTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSKTEAWNQLGADRISPRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...GGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGATGTGCTGTAGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGCAVALASRSWPALWSSRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...GGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACAGCACATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCCCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSFSFEKLACSMVFQLSLPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...GAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCAGATTGCATCCATCAAACCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLYGLPALSRQIASIKPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...TTTGATGGATGCAATCTGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | CACCACCTCACTCTATTTCACAGCATAGCCATAGATGTGGGGCCGCACCAATGTCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHLTLFHSIAIDVGPHQCRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...ACATTGGTGCGGCCCCACATCTATGGCTATGCTGTGAAATAGAGTGAGGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCTCAGGACGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEGPKSVFFGSALVSGRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...TCCTGAGACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCAGACGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSFEKLACSMVFQLSLVRRSNCS*RFSATL Trigger: GAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCG...TCTGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | AGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SFSFEKLACSMVFQLSLVTKRSN*SCRFSA Trigger: CGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGT...GACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | CAGGACCTGCTGCCAGAAGTAATTCCAGGTAGACCGTTCATCTGCCACGTGTTCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDLLPEVIPGRPFICHVFTKRSN*SCRFSA Trigger: CGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGT...GAACACGTGGCAGATGAACGGTCTACCTGGAATTACTTCTGGCAGCAGGTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000229574.2 ENSMUST00000230018.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | ATTCGGTTTGCAAGCTGTAAGTCTCCCCCACTGCTTCCTTTTCCAAGGCCTATGCCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRFASCKSPPLLPFPRPMPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...CATAGGCCTTGGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCAAACCGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
||
| CDS-3UTR GCA 90 bp | AACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCACCACCTCACTAGGGAAAGCACTTTTTaGATACCCAGCTCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGSLEPARSRPDLSHHLTRESTF*IPSSTS Trigger: GCTTGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCT...AGTGAGGTGGTGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 |
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| CDS-3UTR GCA 90 bp | GTCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHLLLEGPKSVFFGSALVTKRSN*SCRFSA Trigger: CGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGT...GACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGTCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCCATCGGTCACCTGGTaGATGTCCTCCCCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRVHLLLEGPKSVFFGSAPSVTW*MSSPAA Trigger: GGCAGCCGGGGAGGACATGCACCAGGTGACCGATGG...CGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR TCA 90 bp | CCTGGATGTGCTGTAGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCACTCCTGCAGATTGCTaGAGAGCTCCCGCTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGCAVALASRSWPALWSSTPADC*RAPAFG Trigger: GCCAAAAGCGGGAGCTCTTCAGCAATCTGCAGGAGT...GGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCTACAGCACATCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | GAGAATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ENFTSKTEAWNQLGADRITKRSN*SCRFSA Trigger: CGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGT...GATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCAGCTGCCGGTTCTCTaGGACGCTCTCCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKRKPGTSSEQTGSLQLPVL*DALQQS Trigger: ACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTG...GAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGCACAGGTGGCAGCCAAAGCAGACTAGTAACACCAGGATAGCAAGTGGGAAGAGCTCCCGCTTTTaGCTCGCCATCTGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PEHRWQPKQTSNTRIASGKSSRF*LAICSL Trigger: CAATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTT...CCCACTTGCTATCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS-3UTR TCA 90 bp | CTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCTCAGGAACTCCTGCAGATTGCTaGAGAGCTCCCGCTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEGPKSVFFGSALVSGTPADC*RAPAFG Trigger: GCCAAAAGCGGGAGCTCTTCAGCAATCTGCAGGAGT...TCCTGAGACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR GCA 90 bp | TTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCCAGCTGCCGGTTCTCTaGGACGCTCTTGAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTSKTEAWNQLGADRISPQLPVL*DALEQE Trigger: TTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTG...GGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000231166.2 |
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| CDS-3UTR GCA 90 bp | AGCTTTAGCTTCGAGAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCCAGCTGCCGGTTCTCTaGGACGCTCTTGAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSFEKLACSMVFQLSLVQLPVL*DALEQE Trigger: TTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTG...GACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTCTCGAAGCTAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231166.2 |
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| CDS-3UTR CCA 90 bp | TTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCCCAAAGAGCTCCCGCTTTTaGCTCGCCATCTGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLKRKPGTSSEQTGSLPKSSRF*LAICSL Trigger: CAATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTT...TGGGAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 |
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| 3UTR CAA 72 bp | CCCACTGCTTCCTTTTCCAAGGCCTATGAGAGACCTTaGGTCCCTTTGGAGGGAGAGTTCAAAGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTASFSKAYERP*VPLEGEFKAAL Trigger: CAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGGCCTTGGAAAAGGAAGCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS-3UTR TCA 90 bp | ATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTCACTCCTGCAGATTGCTaGAGAGCTCCCGCTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKRKPGTSSEQTGSLTPADC*RAPAFG Trigger: GCCAAAAGCGGGAGCTCTTCAGCAATCTGCAGGAGT...GAGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000231166.2 |
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| CDS-3UTR TCA 90 bp | ATTCGGTTTGCAAGCTGTAAGTCTCCCCCACTGCTTCCTTTTCCAAGGCCTATGCTGCCACGTGTTCCATaGAGTAAAAAGCCCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IRFASCKSPPLLPFPRPMLPRVP*SKKPLP Trigger: CGGGAGGGGCTTTTTACTTCATGGAACACGTGGCAG...CATAGGCCTTGGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCAAACCGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTTCTTCAATACAGGGTTTCTTTGTGTAGCCCTGGCGGTCCTGGAACTGGGCCGGCGAACTCCTaGAGATTGCTGAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLQYRVSLCSPGGPGTGPANS*RLLKSS Trigger: GGAGCTCTTCAGCAATCTGCAGGAGTTCGCCGGCCC...AGTTCCAGGACCGCCAGGGCTACACAAAGAAACCCTGTATTGAAGAAGAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCTCAGGAAAGAGCTCCCGCTTTTaGCTCGCCATCTGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLEGPKSVFFGSALVSGKSSRF*LAICSL Trigger: CAATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTT...TCCTGAGACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR CCA 90 bp | GAAGCTGGCCTGCTCTATGGTCTTCCAGCTCTCTCTCGTCAGATTGCATCCATCAAGAGCTCCCGCTTTTaGCTCGCCATCCAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAGLLYGLPALSRQIASIKSSRF*LAIQQF Trigger: AAACTGTTGGATGGCGAGCCAAAAGCGGGAGCTCTT...GATGGATGCAATCTGACGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTAGACATTATGCTTTCCTCACTGTCATGGTACTTTCCCCAAAGCTCAGCTGGCGCTGTCTCAGATaGCTCTGTGGCAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRHYAFLTVMVLSPKLSWRCLR*LCGSRP Trigger: GGGCCTGCTGCCACAGAGCCATCTGAGACAGCGCCA...GCTGAGCTTTGGGGAAAGTACCATGACAGTGAGGAAAGCATAATGTCTAACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR CCA 90 bp | AATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCTCTAGCTGGCCTGCTCTATaGTCTTCCAGCTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NFTSKTEAWNQLGADRISSWPAL*SSSSLS Trigger: CGAGAGAGAGCTGGAAGACCATAGAGCAGGCCAGCT...AGAGATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 |
||
| 3UTR CAA 72 bp | CATGGTACTTTCCCCAAAGCTCAGCAGTCAGTTGCGTaGGCAAAAAGAGTCCATCTGTTGCTGGAAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGTFPKAQQSVA*AKRVHLLLEGP Trigger: GGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR GCA 90 bp | CATGGTACTTTCCCCAAAGCTCAGCAGTCAGTTGCGTTGGCAAAAAGAGTCCATCAGCTGCCGGTTCTCTaGGACGCTCTTGAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGTFPKAQQSVALAKRVHQLPVL*DALEQE Trigger: TTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTG...ATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGAATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGAAGAGCTCCCGCTTTTaGCTCGCCATCCAACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SENFTSKTEAWNQLGADRKSSRF*LAIQQF Trigger: AAACTGTTGGATGGCGAGCCAAAAGCGGGAGCTCTT...CCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATTCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000229574.2 ENSMUST00000231166.2 |
||
| CDS-3UTR GCA 90 bp | GTCATGGTACTTTCCCCAAAGCTCAGCAGTCAGTTGCGTTGGCAAAAAGAGTCCAGGGAAAGCACTTTTTaGATACCCAGCTCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VMVLSPKLSSQLRWQKESRESTF*IPSSTS Trigger: GCTTGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCT...GGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| 3UTR CAA 72 bp | CAGCAGTCAGTTGCGTTGGCAAAAAGAGTCCATCTGTaGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQSVALAKRVHL*LEGPKSVFFGS Trigger: TGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| 3UTR CAA 72 bp | ACTGTCATGGTACTTTCCCCAAAGCTCAGCAGTCAGTaGCGTTGGCAAAAAGAGTCCATCTGTTGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVMVLSPKLSSQ*RWQKESICCWK Trigger: CTTCCAGCAACAGATGGACTCTTTTTGCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCTTCTTCAATACAGGGTTTCTTTGTGTAGCCCTGGCGGTCCTGGAACTAGGGAAAGCACTTTTTaGATACCCAGCTCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLQYRVSLCSPGGPGTRESTF*IPSSTS Trigger: GCTTGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCT...AGTTCCAGGACCGCCAGGGCTACACAAAGAAACCCTGTATTGAAGAAGAAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
||
| 3UTR CAA 72 bp | TCCTTTTCCAAGGCCTATGAGAGACCTTTGGTCCCTTaGGAGGGAGAGTTCAAAGCTGCTCTGATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSKAYERPLVP*EGEFKAALIWF Trigger: AAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCAAAGGTCTCTCATAGGCCTTGGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| 3UTR CAA 72 bp | TGTTTAGATCCATACATACAAATGCAGCTGAAACCCTaGGGCCCACCCAGACTTGCTCTCTGTATGAACACA | + |
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Preference number: 4 (lower is better) Translates to: CLDPYIQMQLKP*GPPRLALCMNT Trigger: TGTGTTCATACAGAGAGCAAGTCTGGGTGGGCCCAAGGGTTTCAGCTGCATTTGTATGTATGGATCTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS GCA 90 bp | TGCATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTCTCCAGCAGAGTCAGCTTCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: CMSSPAATTKRSNCS*RFSATLSSRVSFPE Trigger: CTCGGGGAAGCTGACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACATGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000230252.2 |
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| CDS GCA 90 bp | ACCTGGTGCATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCGACGCTCTCCAGCAGAGTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TWCMSSPAATTKRSN*SCRFSATLSSRVSF Trigger: GAAGCTGACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACATGCACCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000230252.2 |
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| CDS GCA 90 bp | ACCTGGTGCATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCGACGCTCTTGAACAAGAACTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: TWCMSSPAATTKRSN*SCRFSATLLNKNFS Trigger: CGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACATGCACCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229588.2 ENSMUST00000230472.2 ENSMUST00000231166.2 |
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| CDS GCA 90 bp | TGCATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTCTTGAACAAGAACTTCTCGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: CMSSPAATTKRSNCS*RFSATLLNKNFSKL Trigger: CAACTTCGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229588.2 ENSMUST00000230472.2 ENSMUST00000231166.2 |
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| CDS CCA 90 bp | TTTTGCATACCCAGCTCCACAAGCCTAGAAGGTTCAGCAGAAACATaGGAAGCGCCAGGGTACAGACCACCAGCCGCAGGGCCAGGACGG | + |
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Preference number: 5 (lower is better) Translates to: FCIPSSTSLEGSAET*EAPGYRPPAAGPGR Trigger: CCGTCCTGGCCCTGCGGCTGGTGGTCTGTACCCTGGCGCTTCCCATGTTTCTGCTGAACCTTCTAGGCTTGTGGAGCTGGGTATGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229588.2 |
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| CDS-3UTR CAA 90 bp | GGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTGGCCAGAGCACAGGTGGCAGGAAGAGCTCCCGCTTTaGGCTCGCCATCTGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: GKTLSQRTESHWPEHRWQEELPL*ARHLLI Trigger: AATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTTC...CTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS-3UTR CAA 90 bp | GGCAAAACCCTGAGCCAAAGGACAGAGAGCCACTGGCCAGAGCACAGGTGGCAGTTCTCTGCGACGCTCTaGAACAAGAACTTCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKTLSQRTESHWPEHRWQFSATL*NKNFSK Trigger: CTTCGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAA...CTGCCACCTGTGCTCTGGCCAGTGGCTCTCTGTCCTTTGGCTCAGGGTTTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067752.5 |
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| CDS CCA 90 bp | ATTTTTGGAGGAAGGCAGCTGTTGTTGTCTGTAGGTTCCAGGAGATaGCGCTGTCTCAGATGGCTCTGTGGCAGCAGGCCCCTTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: IFGGRQLLLSVGSRR*RCLRWLCGSRPLVE Trigger: CTCTACAAGGGGCCTGCTGCCACAGAGCCATCTGAGACAGCGCCATCTCCTGGAACCTACAGACAACAACAGCTGCCTTCCTCCAAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR CAA 90 bp | GAGAATTTTACATCTAAAACGGAAGCCTGGAACCAGCTCGGAGCAGACCGGATCGAAGAGCTCCCGCTTTaGGCTCGCCATCTGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: ENFTSKTEAWNQLGADRIEELPL*ARHLLI Trigger: AATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTTC...GATCCGGTCTGCTCCGAGCTGGTTCCAGGCTTCCGTTTTAGATGTAAAATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229217.2 |
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| CDS-3UTR CAA 90 bp | TCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGCTTGTCTGAAGAGCTCCCGCTTTaGGCTCGCCATCTGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: SICCWKVPSLSSLVQRLSEELPL*ARHLLI Trigger: AATGAGCAGATGGCGAGCCAAAAGCGGGAGCTCTTC...AGACAAGCGCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGAGTCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCAGCGGAAGGCAGCTGTTGTaGTCTGTAGGTTCCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KKSPSVAGRSQVCLLWFSGRQLL*SVGSRR Trigger: TCTCCTGGAACCTACAGACAACAACAGCTGCCTTCC...GCTGAACCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS GCA 90 bp | TGTACATCACGGAGAATCGCTTCAGGAAGTAGGGAAAGCACTTTTTaGATACCCAGCTCCACAAGCCTAGAAGGTTCAGCAGAAACATGG | + |
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Preference number: 5 (lower is better) Translates to: CTSRRIASGSRESTF*IPSSTSLEGSAETW Trigger: CCATGTTTCTGCTGAACCTTCTAGGCTTGTGGAGCTGGGTATGCAAAAAGTGCTTTCCCTACTTCCTGAAGCGATTCTCCGTGATGTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067752.5 ENSMUST00000229588.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCAAAAAGAGTCCATCTGTTGCTGGAAGGTCCCAAGTCTGTCTTCTTTGGTTCTCTGCGACGCTCTaGAACAAGAACTTCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: VGKKSPSVAGRSQVCLLWFSATL*NKNFSK Trigger: CTTCGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAA...CCAAAGAAGACAGACTTGGGACCTTCCAGCAACAGATGGACTCTTTTTGCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229588.2 |
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| CDS GCA 72 bp | TCCCCGGCTGCCACCACGAAGCGCTCGAACTGCAGCTaGCGGTTCTCTGCGACGCTCTCCAGCAGAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPAATTKRSNCS*RFSATLSSRVS Trigger: GCTGACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000230252.2 |
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| CDS GCA 72 bp | CACCACGAAGCGCTCGAACTGCAGCTGCCGGTTCTCTaGGACGCTCTCCAGCAGAGTCAGCTTCCCCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: HHEALELQLPVL*DALQQSQLPRG Trigger: CCCTCGGGGAAGCTGACTCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000230252.2 |
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| CDS GCA 72 bp | ATGTCCTCCCCGGCTGCCACCACGAAGCGCTCGAACTaGAGCTGCCGGTTCTCTGCGACGCTCTCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: MSSPAATTKRSN*SCRFSATLSSR Trigger: TCTGCTGGAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTGGCAGCCGGGGAGGACAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000229217.2 ENSMUST00000229574.2 ENSMUST00000230252.2 |
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| CDS GCA 72 bp | CACCACGAAGCGCTCGAACTGCAGCTGCCGGTTCTCTaGGACGCTCTTGAACAAGAACTTCTCGAAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HHEALELQLPVL*DALEQELLEVG Trigger: CCCAACTTCGAGAAGTTCTTGTTCAAGAGCGTCGCAGAGAACCGGCAGCTGCAGTTCGAGCGCTTCGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067752.5 ENSMUST00000229588.2 ENSMUST00000230472.2 ENSMUST00000231166.2 |
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