Pregenerated sensors for METTL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021891Ensembl transcript IDs: ENSMUST00000055303.5, ENSMUST00000226986.2, ENSMUST00000227595.2, ENSMUST00000227777.2, ENSMUST00000228181.2, ENSMUST00000228727.2
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGCGTACTCCAGGCTTAGGTCTCCCACACCGTGTACTCCAGGCTaGCTGCTCCTGAGGCTTCCAGATGGTTCTTCCGTCTCTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TAYSRLRSPTPCTPG*LLLRLPDGSSVSAS Trigger: AGAAGCAGAGACGGAAGAACCATCTGGAAGCCTCAGGAGCAGCCAGCCTGGAGTACACGGTGTGGGAGACCTAAGCCTGGAGTACGCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR CCA 90 bp | CCTGGGACTGGAATTACTGATGGAAGTGAGCTGCCATGTGGGTGCTaGAAACCGAACCCAGGCCCTGCCCAAGAGCAGCCAACACTCTTG | + |
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Preference number: 1 (lower is better) Translates to: PGTGITDGSELPCGC*KPNPGPAQEQPTLL Trigger: CAAGAGTGTTGGCTGCTCTTGGGCAGGGCCTGGGTTCGGTTTCCAGCACCCACATGGCAGCTCACTTCCATCAGTAATTCCAGTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR CCA 90 bp | GCTGAGCAAGCCAGGGGAGGCAAGCCAGTAAAGAACATCCCTCCATaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGTTTGAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: AEQARGGKPVKNIPP*PLHQLLLPDLFEFQ Trigger: CTGGAACTCAAACAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCCCCTGGCTTGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR TCA 90 bp | CCTCACTTGCATAATGCGCACCTGCTGTCTCCTCAGCCCCAGCACTaGACATCTTTCTGCATTTATCCTTCACGTGCTGGGGCTATGGGT | + |
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Preference number: 1 (lower is better) Translates to: PHLHNAHLLSPQPQH*TSFCIYPSRAGAMG Trigger: ACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAAGATGTTCAGTGCTGGGGCTGAGGAGACAGCAGGTGCGCATTATGCAAGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR TCA 90 bp | TCCCCAGGCCGCCATGGTGAACTCAAGGCACTTGTTTGGAAGATGTaGCTTTCTGGTCCTACTTCCCCGTTTCCAGCACAGTTCCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: SPGRHGELKALVWKM*LSGPTSPFPAQFLL Trigger: CAACAGGAACTGTGCTGGAAACGGGGAAGTAGGACCAGAAAGTCACATCTTCCAAACAAGTGCCTTGAGTTCACCATGGCGGCCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR TCA 90 bp | TTAATCCCAGCCCTCAAGAAGCAGATCTCTGAGTCGGGGCCAGCCTaGTCTATACAGCAAGTTCCAGGACAGTCAGGACGACACTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: LIPALKKQISESGPA*SIQQVPGQSGRHCL Trigger: TAGACAGTGTCGTCCTGACTGTCCTGGAACTTGCTGTATAGATCAGGCTGGCCCCGACTCAGAGATCTGCTTCTTGAGGGCTGGGATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR CCA 90 bp | ACGGACATCTTGCCATCGTGTATGCACATGCATCAGATGCATGCTTaGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: TDILPSCMHMHQMHA*RSWQPRGVGCPEMK Trigger: CTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR CCA 90 bp | ACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACCCTGCCAGCATCTGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: TDFQTGCTSFQSHQQ*RSVPLSPPCQHLLS Trigger: TGACAGCAGATGCTGGCAGGGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | CAACCTTCATTGTTCTCAGTCCAGTCCACTATCAAACACCAAACATaGATCAGCAGCTGCAGACCAGTCCACTCAGCAGGCACCACACAC | + |
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Preference number: 1 (lower is better) Translates to: QPSLFSVQSTIKHQT*ISSCRPVHSAGTTH Trigger: GTGTGTGGTGCCTGCTGAGTGGACTGGTCTGCAGCTGCTGATTCATGTTTGGTGTTTGATAGTGGACTGGACTGAGAACAATGAAGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CCA 90 bp | TTGCCATCGTGTATGCACATGCATCAGATGCATGCTTGGCGCTCATaGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAGGAAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: LPSCMHMHQMHAWRS*QPRGVGCPEMKEVT Trigger: TGTAACTTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR TCA 90 bp | GGATTACAGGTTCATGTCACCAGACCCGGCTTTTCACAGGGATGCTaGAATGCTGCAGCACACACCTTATTATTAACTGAGCCTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GLQVHVTRPGFSQGC*NAAAHTLLLTEPLP Trigger: GGGAAGAGGCTCAGTTAATAATAAGGTGTGTGCTGCAGCATTTCAGCATCCCTGTGAAAAGCCGGGTCTGGTGACATGAACCTGTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR GCA 90 bp | AAGCTGCTCTGTAGACCATTCTGTTCACAAATTCAGAGATCTGCCTaGCTCTGCCTCCCAAGTGCTTGGCTTGACACTGCAACTCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: KLLCRPFCSQIQRSA*LCLPSAWLDTATLN Trigger: GTTAAGAGTTGCAGTGTCAAGCCAAGCACTTGGGAGGCAGAGGCAGGCAGATCTCTGAATTTGTGAACAGAATGGTCTACAGAGCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR TCA 90 bp | CTGAACATCTTTCTGCATTTATCCTTCACGTGCTGGGGCTATGGGTaGCACCACACCTGGTTAATTCAGTGCTGGGATGTAATGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LNIFLHLSFTCWGYG*HHTWLIQCWDVMSA Trigger: TGCTGACATTACATCCCAGCACTGAATTAACCAGGTGTGGTGTCACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAAGATGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR GCA 90 bp | CTCTGTAGACCATTCTGTTCACAAATTCAGAGATCTGCCTGCCTCTaGCTCCCAAGTGCTTGGCTTGACACTGCAACTCTTAACATCCAT | + |
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Preference number: 1 (lower is better) Translates to: LCRPFCSQIQRSACL*LPSAWLDTATLNIH Trigger: ATGGATGTTAAGAGTTGCAGTGTCAAGCCAAGCACTTGGGAGGCAGAGGCAGGCAGATCTCTGAATTTGTGAACAGAATGGTCTACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR CCA 90 bp | AGCACTGAACATCTTTCTGCATTTATCCTTCACGTGCTGGGGCTATaGGTGACACCACACCTGGTTAATTCAGTGCTGGGATGTAATGTC | + |
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Preference number: 1 (lower is better) Translates to: STEHLSAFILHVLGL*VTPHLVNSVLGCNV Trigger: GACATTACATCCCAGCACTGAATTAACCAGGTGTGGTGTCACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAAGATGTTCAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR GCA 90 bp | TATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACATaGATCAGATGCATGCTTGGCGCTCATGGCAGCCAAGAGGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: YFYFCSRTSCHRVCT*IRCMLGAHGSQEVL Trigger: CAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR GCA 90 bp | ATTTCCAGTTTTCTGAGGAACCACCAGACTGATTTCCAGACTGGTTaGACCAGTTTTCAATCCCACCAGCAATGGAGGAGTGTTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ISSFLRNHQTDFQTG*TSFQSHQQWRSVPL Trigger: AAGAGGAACACTCCTCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAACTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | TATGCACACCAAAGAACTGTCTTAAATGTATCATCAGCAGATGCTTaGCCTGCGACCTGTTCATGTATCTCTTGTCGGCTCCCATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: YAHQRTVLNVSSADA*PATCSCISCRLPCF Trigger: GAAGCATGGGAGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTTCTTTGGTGTGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR GCA 90 bp | TCTGTATGCACACCAAAGAACTGTCTTAAATGTATCATCAGCAGATaGTTGACCTGCGACCTGTTCATGTATCTCTTGTCGGCTCCCATG | + |
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Preference number: 1 (lower is better) Translates to: SVCTPKNCLKCIISR*LTCDLFMYLLSAPM Trigger: CATGGGAGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTTCTTTGGTGTGCATACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR GCA 90 bp | CAAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATaGACATGCATCAGATGCATGCTTGGCGCTCATGGCAGCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QKYFYFCSRTSCHRV*TCIRCMLGAHGSQE Trigger: CTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR TCA 90 bp | TTCTATGAAGTGCCCACAAGTGAACTTCAACAACATAGTGTAAGGTaGACCAATACATGCATGCAGTCATCGAAGAATGTCGAGGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: FYEVPTSELQQHSVR*TNTCMQSSKNVEVE Trigger: CTCCACCTCGACATTCTTCGATGACTGCATGCATGTATTGGTTCACCTTACACTATGTTGTTGAAGTTCACTTGTGGGCACTTCATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | TATGTTAAGGTCCTTGATCCACTTGGACTTGAGCTTTGTGCAAGGTaGGACGTATGGATCAATTTGCATTCTACATGCAGAAGACCAGTA | + |
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Preference number: 1 (lower is better) Translates to: YVKVLDPLGLELCAR*DVWINLHSTCRRPV Trigger: TACTGGTCTTCTGCATGTAGAATGCAAATTGATCCATACGTCTCACCTTGCACAAAGCTCAAGTCCAAGTGGATCAAGGACCTTAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | CCAATGCTTGAGCTCCTACTGCCTTTGAGATATCTACATTCCTCCTaGATAACGTGCATCCTTTCACGTGTTTGCTATAGCAAAATATTC | + |
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Preference number: 1 (lower is better) Translates to: PMLELLLPLRYLHSS*ITCILSRVCYSKIF Trigger: GAATATTTTGCTATAGCAAACACGTGAAAGGATGCACGTTATTCAGGAGGAATGTAGATATCTCAAAGGCAGTAGGAGCTCAAGCATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR GCA 90 bp | TTACAGCCTGAGCCATTGGAGTTCTGTTCAGGAAAATTTTTCCTGTaGCAATGCATTCAAGGCAATTTCCCACGTTCTCTTCTATTAGAT | + |
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Preference number: 1 (lower is better) Translates to: LQPEPLEFCSGKFFL*QCIQGNFPRSLLLD Trigger: ATCTAATAGAAGAGAACGTGGGAAATTGCCTTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR GCA 90 bp | TCTCTAATCTGTAGGCTGCTGTTTTGTCCTATTGACGGTGTCCTTTaGCTTACAGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLICRLLFCPIDGVL*LTEAFQFQEVPFIN Trigger: ATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCTGTAAGGCAAAGGACACCGTCAATAGGACAAAACAGCAGCCTACAGATTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR GCA 90 bp | CCTGAGCCATTGGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAATaGATTCAAGGCAATTTCCCACGTTCTCTTCTATTAGATTCATTA | + |
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Preference number: 1 (lower is better) Translates to: PEPLEFCSGKFFLCQ*IQGNFPRSLLLDSL Trigger: TAATGAATCTAATAGAAGAGAACGTGGGAAATTGCCTTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CCA 90 bp | TCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGAGCCATTaGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAATGCATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SRGPIYQLLSYSLSH*SSVQENFSCANAFK Trigger: CTTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | GTTAATTCAGTGCTGGGATGTAATGTCAGCAAGCGTTCTACCAACTaGGCTACAGTCAGTCTGAACACAAGACTTCATTCTTTATATAAA | + |
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Preference number: 1 (lower is better) Translates to: VNSVLGCNVSKRSTN*ATVSLNTRLHSLYK Trigger: TTTATATAAAGAATGAAGTCTTGTGTTCAGACTGACTGTAGCTCAGTTGGTAGAACGCTTGCTGACATTACATCCCAGCACTGAATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR TCA 90 bp | TTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTaGGCCATTGGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAATG | + |
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Preference number: 1 (lower is better) Translates to: FQFQEVPFINCYLTA*AIGVLFRKIFPVPM Trigger: CATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR TCA 90 bp | TATAGGTGTGTGGGTTTATTTCTTGCGTCTTTGATTCCATTCCATTaGTTAGCCTGTTTGTCTCTGTGCCAATACCATGTAGTTTTTAAC | + |
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Preference number: 1 (lower is better) Translates to: YRCVGLFLASLIPFH*LACLSLCQYHVVFN Trigger: GTTAAAAACTACATGGTATTGGCACAGAGACAAACAGGCTAATCAATGGAATGGAATCAAAGACGCAAGAAATAAACCCACACACCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCCACAGGCCAGGGCTGGGTATGTGGTGTATCAGAACTTGCTCTAAGGACTGCACGGCCACACCCCTaGCCAGGCAGCACTCCACTA | + |
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Preference number: 2 (lower is better) Translates to: VPTGQGWVCGVSELALRTARPHP*PGSTPL Trigger: TAGTGGAGTGCTGCCTGGGCAGGGGTGTGGCCGTGC...AGTCCTTAGAGCAAGTTCTGATACACCACATACCCAGCCCTGGCCTGTGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCCACCTCCCACTGCTGGGATTACAGATGTAGGCCATTCCCAGCTATGCTGCCATGTGGGTGCTaGAAACCGAACCCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SVPTSHCWDYRCRPFPAMLPCGC*KPNPGP Trigger: AGGGCCTGGGTTCGGTTTCCAGCACCCACATGGCAG...CATAGCTGGGAATGGCCTACATCTGTAATCCCAGCAGTGGGAGGTGGGGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR CAA 90 bp | GGCTGGGTATGTGGTGTATCAGAACTTGCTCTAAGGACTTGGGACTaGTGTGTTAGCACGGCCACACCCCTGCCCAGGCAGCACTCCACT | + |
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Preference number: 2 (lower is better) Translates to: GWVCGVSELALRTWD*CVSTATPLPRQHST Trigger: AGTGGAGTGCTGCCTGGGCAGGGGTGTGGCCGTGCTAACACACAAGTCCCAAGTCCTTAGAGCAAGTTCTGATACACCACATACCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGTCTCCCACACCGCGTACTCCAGGCTTAGGTCTCCCACACCGTGTACTCCTGCATGTATGTCTGTaGACCACTTGCAGAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRSPTPRTPGLGLPHRVLLHVCL*TTCRGQ Trigger: CTGACCTCTGCAAGTGGTGCACAGACATACATGCAG...GAGTACACGGTGTGGGAGACCTAAGCCTGGAGTACGCGGTGTGGGAGACCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGAGGCTTCTCGGCAACTaGTTGTATCTGCTGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PVKNIPPWPLHQLLLPDLRLLGN*LYLLSH Trigger: GTGGCTCAGCAGATACAAGCAGTTGCCGAGAAGCCT...CAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCCACCTCCCACTGCTGGGATTACAGATGTAGGCCATTCCCAGCTATGCCTGAGGCTTCCAGATaGTTCTTCCGTCTCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SVPTSHCWDYRCRPFPAMPEASR*FFRLCF Trigger: GAAGCAGAGACGGAAGAACCATCTGGAAGCCTCAGG...CATAGCTGGGAATGGCCTACATCTGTAATCCCAGCAGTGGGAGGTGGGGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGGTCTCATGTAGCCCAGGAACAAGCTGAGGGTCAGAATGACCTATGGCGCAGGGCTGGGGACTaGATCCAGAAACTGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ETGSHVAQEQAEGQNDLWRRAGD*IQKLSN Trigger: ATTGCTCAGTTTCTGGATCCAGTCCCCAGCCCTGCG...CCATAGGTCATTCTGACCCTCAGCTTGTTCCTGGGCTACATGAGACCCTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAAGGTTATCTCTGCTCTaGGTGGTTGCATACACCTGG | + |
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Preference number: 2 (lower is better) Translates to: APCGWDHLWAGSLGFYKRRLSLL*VVAYTW Trigger: CCAGGTGTATGCAACCACGCAGAGCAGAGATAACCT...TCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGAACGGATTCTCTCCTTCCACAGAGTGGGCTCTAAGCATTGAACTGAGGAGCACCTTTACCTGCTaGGCCAACTCCCCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: CRNGFSPSTEWALSIELRSTFTC*ANSPVF Trigger: GAAGACTGGGGAGTTGGCTCAGCAGGTAAAGGTGCT...CCTCAGTTCAATGCTTAGAGCCCACTCTGTGGAAGGAGAGAATCCGTTCCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGATGTATCATCAGCAGATaGTTGACCTGCGACCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: APCGWDHLWAGSLGFYKRCIISR*LTCDLF Trigger: GAACAGGTCGCAGGTCAAGCATCTGCTGATGATACA...TCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR GCA 90 bp | CATGCTTGGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAGGAAACAAATTCAGAGATCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HAWRSWQPRGVGCPEMKETNSEI*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGATCTCTGAATTTGT...TTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGTCTCCTTCCACAGAGTaGGCTCTAAGCATTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PVKNIPPWPLHQLLLPDLSPSTE*ALSIEL Trigger: CAGTTCAATGCTTAGAGCCCACTCTGTGGAAGGAGA...CAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR TCA 90 bp | CACGGACATCTTGCCATCGTGTATGCACATGCATCAGATGCATGCTTGGCGCTCTTGGATGCCCTGAAATaGAGGAAGTTACAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HGHLAIVYAHASDACLALLDALK*RKLQAS Trigger: TGAAGCCTGTAACTTCCTTCATTTCAGGGCATCCAA...GAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR GCA 90 bp | GAACATCTTTCTGCATTTATCCTTCACGTGCTGGGGCTATGGGTGACACCACACCTGAGCCATCTCTCCTaGTCAACACAGACTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EHLSAFILHVLGLWVTPHLSHLS*STQTAD Trigger: ATCAGCAGTCTGTGTTGAGCAGGAGAGATGGCTCAG...GTGTGGTGTCACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAAGATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCCAGGACAGTCAGGACGACACTGTCTAAAACAAACCACTCTTTTTAACACTCAGGCTGGCTGCTCCTaGGGCTTCCAGATGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VPGQSGRHCLKQTTLFNTQAGCS*GFQMVL Trigger: AAGAACCATCTGGAAGCCTCAGGAGCAGCCAGCCTG...AGTGTTAAAAAGAGTGGTTTGTTTTAGACAGTGTCGTCCTGACTGTCCTGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR TCA 90 bp | GTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTGGGCAGCACTACACCACCTaGGCCACATTCCCAGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VSLTTEPSFQSSTLLSFGQHYTT*ATFPVL Trigger: GAGCACTGGGAATGTGGCTCAGGTGGTGTAGTGCTG...CCCAAAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAACCACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCTGTTATCTTACAGCCTaGGCCATTGGAGTTCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GTTRLISRLVAPVFNPTSCYLTA*AIGVLF Trigger: GAACAGAACTCCAATGGCTCAGGCTGTAAGATAACA...GCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGTGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTGGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGACATATGGGCCATGGTaGTCATATGGAGGTAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: NFGVAWWYTPLIPALKKQTYGPW*SYGGNS Trigger: ACTGTTACCTCCATATGAGCACCATGGCCCATATGT...CTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTAGCACTGGCCATCTTGGAAGCTGCTCTGTAGACCATTCTGTTCACAAAGGGATCTTTCCTGTCTaGCTTCCCAGCACAGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: LCSTGHLGSCSVDHSVHKGIFPV*LPSTGL Trigger: TAATCCTGTGCTGGGAAGGCAGACAGGAAAGATCCC...TTTGTGAACAGAATGGTCTACAGAGCAGCTTCCAAGATGGCCAGTGCTACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR CCA 90 bp | CATACCCACACGTTTATTCATCTCTCTCTCTCTCACACACACACACACACACACGTGGTTGCATACACCTaGCTAGGTGGCCCTCATACT | + |
|
Preference number: 2 (lower is better) Translates to: HTHTFIHLSLSHTHTHTHVVAYT*LGGPHT Trigger: AGTATGAGGGCCACCTAGCCAGGTGTATGCAACCAC...GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTTCATTTGTTAGTCACCATGTGGCTGCTGGGATTCAAACCTAGGTCCTCTAAGGAGTTTTGCCTGTaGGTCTGGAAAAGTGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RLHLLVTMWLLGFKPRSSKEFCL*VWKSVP Trigger: GGGGACACTTTTCCAGACCCACAGGCAAAACTCCTT...AGAGGACCTAGGTTTGAATCCCAGCAGCCACATGGTGACTAACAAATGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTAGCACTGGCCATCTTGGAAGCTGCTCTGTAGACCATTCTGTTCACAAAGAGCCACATTCCCAGTaGTCTGTGCCAGCAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: LCSTGHLGSCSVDHSVHKEPHSQ*SVPANL Trigger: TAAATTTGCTGGCACAGAGCACTGGGAATGTGGCTC...TTTGTGAACAGAATGGTCTACAGAGCAGCTTCCAAGATGGCCAGTGCTACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGACCAGTCCACTCAGCAGGCACCACACACGAATCAGCAAGGGCAGTTCAATTGTGGGTTTATTTCTTaGGTCTTTGATTCCATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ADQSTQQAPHTNQQGQFNCGFIS*VFDSIP Trigger: TGGAATGGAATCAAAGACGCAAGAAATAAACCCACA...ATTGAACTGCCCTTGCTGATTCGTGTGTGGTGCCTGCTGAGTGGACTGGTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTCCCCACCTCCCACTGCTGGGATTACAGATGTAGGCCATTCCCAGCTATGTTAGTCTTTAATAAGTaGTCAGTCTGTATGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: SVPTSHCWDYRCRPFPAMLVFNK*SVCMHT Trigger: GGTGTGCATACAGACTGACCACTTATTAAAGACTAA...CATAGCTGGGAATGGCCTACATCTGTAATCCCAGCAGTGGGAGGTGGGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGGCTGAGCCACATTACTaGCTCTCAATTTACTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: PVKNIPPWPLHQLLLPDLAEPHY*LSIYLF Trigger: AAATAAGTAAATTGAGAGCCAGTAATGTGGCTCAGC...CAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCAGGACAGTCAGGACGACACTGTCTAAAACAAACCACTCTTTTTAACACTAGCAGCCAACACTCTTaGTCACTGAGCCATCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPGQSGRHCLKQTTLFNTSSQHS*SLSHLS Trigger: GGAGAGATGGCTCAGTGATCAAGAGTGTTGGCTGCT...AGTGTTAAAAAGAGTGGTTTGTTTTAGACAGTGTCGTCCTGACTGTCCTGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR TCA 90 bp | GTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTGGGACTGGATCCAGAAACTaGGCAATGCCAGGTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VSLTTEPSFQSSTLLSFGTGSRN*AMPGQH Trigger: GTGCTGACCTGGCATTGCTCAGTTTCTGGATCCAGT...CCCAAAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACCCTGCCAGCATCTGCTGTCATCTGAGGTTTTGATCTTAGCCATTTTGATTAAGCAAACCAATGCTTaGGCTCCTACTGCCTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PPCQHLLSSEVLILAILIKQTNA*APTAFE Trigger: CTCAAAGGCAGTAGGAGCTCAAGCATTGGTTTGCTT...AATCAAAATGGCTAAGATCAAAACCTCAGATGACAGCAGATGCTGGCAGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGTCTTCCTCAACTCATACCCACACGTTTATTCATCTCTCTCTCTCTCACCTTCAGTTGAGGAAATaGCTCCATGAGATCCAACTC | + |
|
Preference number: 2 (lower is better) Translates to: AMSSSTHTHTFIHLSLSHLQLRK*LHEIQL Trigger: GAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAG...GTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATGAGTTGAGGAAGACATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTCCAGAAACTGAGCAATaGCAGGTCAGCACTACACCA | + |
|
Preference number: 2 (lower is better) Translates to: GGILNNRAIFPVFHLTFFPETEQ*QVSTTP Trigger: TGGTGTAGTGCTGACCTGGCATTGCTCAGTTTCTGG...AAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR GCA 90 bp | GTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTGGGACTGCTGACCATCCCTaGAGATGGACTTTACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSLTTEPSFQSSTLLSFGTADHP*RWTLLL Trigger: CAGGAGTAAAGTCCATCTGCAGGGATGGTCAGCAGT...CCCAAAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAACCACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCACGTATGGATCAATTTaGATTCTACATGCAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GTTRLISRLVAPVFNPTSTYGSI*ILHAED Trigger: GTCTTCTGCATGTAGAATGCAAATTGATCCATACGT...GCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGTGGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTGGGCCAGGGCTGGGTATGTaGTGTATCAGAACTTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSLTTEPSFQSSTLLSFGPGLGM*CIRTCS Trigger: AGAGCAAGTTCTGATACACCACATACCCAGCCCTGG...CCCAAAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR GCA 90 bp | GTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTGGGGGCCATCTTGGAAGCTaGTCTGTAGACCATTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSLTTEPSFQSSTLLSFGGHLGS*SVDHSV Trigger: AACAGAATGGTCTACAGAGCAGCTTCCAAGATGGCC...CCCAAAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CAA 90 bp | ACCTTATTATTAACTGAGCCTCTTCCCAGTTATAAGCATCTAACTTaGGGACTGTTCTTCGAGACAGGGTCTCATGTAGCCCAGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: TLLLTEPLPSYKHLT*GLFFETGSHVAQEQ Trigger: TTGTTCCTGGGCTACATGAGACCCTGTCTCGAAGAACAGTCCCAAAGTTAGATGCTTATAACTGGGAAGAGGCTCAGTTAATAATAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAATGACTGTCTCCAGGATAGAAGGTGGAGAGTCAAAGAGGAAGATGCCATGTGTTCCTATTTTGTACTaGACATTGCAGACAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: QMTVSRIEGGESKRKMPCVPILY*TLQTSI Trigger: GATGCTTGTCTGCAATGTGCAGTACAAAATAGGAAC...ACATGGCATCTTCCTCTTTGACTCTCCACCTTCTATCCTGGAGACAGTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR CCA 90 bp | CATACCCACACGTTTATTCATCTCTCTCTCTCTCACACACACACACACACACACCCATGCTTCCCTTTGTaGAGATGGATAATCATACAA | + |
|
Preference number: 2 (lower is better) Translates to: HTHTFIHLSLSHTHTHTHPCFPL*RWIIIQ Trigger: TTGTATGATTATCCATCTCCACAAAGGGAAGCATGG...GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTTGTGTATTTCTATACACGATGCATGTATACACATCTTCTATGAGAGTGGACCTGATGGAAGTGAGCTaGCATGTGGGTGCTGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FCVFLYTMHVYTSSMRVDLMEVS*HVGAGN Trigger: GTTTCCAGCACCCACATGGCAGCTCACTTCCATCAG...GTCCACTCTCATAGAAGATGTGTATACATGCATCGTGTATAGAAATACACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTTGTGTATTTCTATACACGATGCATGTATACACATCTTCTATGAGAGTGGACTGTCTGTGCACCACTTaGAGAGGTCAGAAGAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FCVFLYTMHVYTSSMRVDCLCTT*RGQKRA Trigger: TGCCCTCTTCTGACCTCTGCAAGTGGTGCACAGACA...GTCCACTCTCATAGAAGATGTGTATACATGCATCGTGTATAGAAATACACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGAAGATGCCATGTCTTCCTCAACTCATACCCACACGTTTATTCATCTCTTGTAATTTGGGTGTTTaGCTGCATGTATGTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KRKMPCLPQLIPTRLFISCNLGV*LHVCLC Trigger: GCACAGACATACATGCAGGCAAACACCCAAATTACA...AGAGATGAATAAACGTGTGGGTATGAGTTGAGGAAGACATGGCATCTTCCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTTAATCCCTGGGAACTaGAGTTACAGATGGTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GGILNNRAIFPVFHLTFFLIPGN*SYRWLN Trigger: GTTTAACCATCTGTAACTTCAGTTCCCAGGGATTAA...AAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATACCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCAATCTAAAAGAAAACAACATGAGGCTTGCCAACAGGCAGCAAGAAATTTACAGCCTGAGCCATTaGAGTTCTGTTCAGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: QFNLKENNMRLANRQQEIYSLSH*SSVQEN Trigger: ATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTA...AATTTCTTGCTGCCTGTTGGCAAGCCTCATGTTGTTTTCTTTTAGATTGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CAA 90 bp | TTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGAGCCATaGGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAATGCATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FKRSHLSIVILQPEP*EFCSGKFFLCQCIQ Trigger: TTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CAA 90 bp | TTGCCTTACAGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATaGTTATCTTACAGCCTGAGCCATTGGAGTTCTGTTCAGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LPYRSFSVSRGPIYQ*LSYSLSHWSSVQEN Trigger: ATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCTGTAAGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CAA 90 bp | ATTAGATTCATTATATTTGGTTTTATGTTAAGGTCCTTGATCCACTaGGACTTGAGCTTTGTGCAAGGTGAGACGTATGGATCAATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: IRFIIFGFMLRSLIH*DLSFVQGETYGSIC Trigger: GCAAATTGATCCATACGTCTCACCTTGCACAAAGCTCAAGTCCAAGTGGATCAAGGACCTTAACATAAAACCAAATATAATGAATCTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAATTGCAGGAACCTCATGAGTTCTTTGGTGAGTTTCTTTCTATGAAGTGCTCCACTGTATGGTTTTaGCTTCTTTGTCAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KKLQEPHEFFGEFLSMKCSTVWF*LLCQRK Trigger: TTTTCTTTGACAAAGAAGCCAAAACCATACAGTGGA...GCACTTCATAGAAAGAAACTCACCAAAGAACTCATGAGGTTCCTGCAATTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CAA 90 bp | TCTGTTTTTCTACAGTGTGCAAACAAATCCACTTTATTTACTTATTaGTGCACATGTGAGGTCAGAAAAACAATTCTCATTGGCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SVFLQCANKSTLFTY*CTCEVRKTILIGSH Trigger: GTGAGAGCCAATGAGAATTGTTTTTCTGACCTCACATGTGCACAAATAAGTAAATAAAGTGGATTTGTTTGCACACTGTAGAAAAACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GGTCTCCCACACCGTGTACTCCAGGCTGGCTGCTCCTaGGGCTTCCAGATGGTTCTTCCGTCTCTGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLPHRVLQAGCS*GFQMVLPSLLL Trigger: GAGAAGCAGAGACGGAAGAACCATCTGGAAGCCTCAGGAGCAGCCAGCCTGGAGTACACGGTGTGGGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | TCCAGGCTTAGGTCTCCCACACCGTGTACTCCAGGCTaGCTGCTCCTGAGGCTTCCAGATGGTTCTTCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRLRSPTPCTPG*LLLRLPDGSSV Trigger: GACGGAAGAACCATCTGGAAGCCTCAGGAGCAGCCAGCCTGGAGTACACGGTGTGGGAGACCTAAGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | GGACTTGGGACTTGTGTGTTAGCACGGCCACACCCCTaGCCAGGCAGCACTCCACTAATGGTGCAGTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLGTCVLARPHP*PGSTPLMVQSS Trigger: ACTTGACTGCACCATTAGTGGAGTGCTGCCTGGGCAGGGGTGTGGCCGTGCTAACACACAAGTCCCAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | ACGCAGGGCTGGGGACTGGATCCAGAAACTGAGCAATaGCAGGTCAGCACTACACCACCTGAGCCACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQGWGLDPETEQ*QVSTTPPEPHS Trigger: GGAATGTGGCTCAGGTGGTGTAGTGCTGACCTGGCATTGCTCAGTTTCTGGATCCAGTCCCCAGCCCTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | GGAATTACTGATGGAAGTGAGCTGCCATGTGGGTGCTaGAAACCGAACCCAGGCCCTGCCCAAGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GITDGSELPCGC*KPNPGPAQEQP Trigger: TGGCTGCTCTTGGGCAGGGCCTGGGTTCGGTTTCCAGCACCCACATGGCAGCTCACTTCCATCAGTAATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | CAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTaGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGGKAPCGWDHL*AGSLGFYKRAG Trigger: GCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | CGAACCCAGGCCCTGCCCAAGAGCAGCCAACACTCTTaGTCACTGAGCCATCTCTCCTGCTCAACACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RTQALPKSSQHS*SLSHLSCSTQT Trigger: AGTCTGTGTTGAGCAGGAGAGATGGCTCAGTGATCAAGAGTGTTGGCTGCTCTTGGGCAGGGCCTGGGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | ACTGGAATTACTGATGGAAGTGAGCTGCCATGTGGGTaGTGGAAACCGAACCCAGGCCCTGCCCAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGITDGSELPCG*WKPNPGPAQEQ Trigger: CTGCTCTTGGGCAGGGCCTGGGTTCGGTTTCCAGCACCCACATGGCAGCTCACTTCCATCAGTAATTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | AACAGGGCACGACCCTACAGCACCAACACTGGGAAGTaGGCACTGAGGGGTTCAATGACAAGCTCCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NRARPYSTNTGK*ALRGSMTSSRS Trigger: TGACCTGGAGCTTGTCATTGAACCCCTCAGTGCCCACTTCCCAGTGTTGGTGCTGTAGGGTCGTGCCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | AGGCCCTGCCCAAGAGCAGCCAACACTCTTGATCACTaGGCCATCTCTCCTGCTCAACACAGACTGCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RPCPRAANTLDH*AISPAQHRLLI Trigger: GATCAGCAGTCTGTGTTGAGCAGGAGAGATGGCTCAGTGATCAAGAGTGTTGGCTGCTCTTGGGCAGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GCCCTCAAGAAGCAGATCTCTGAGTCGGGGCCAGCCTaGTCTATACAGCAAGTTCCAGGACAGTCAGGACGA | + |
|
Preference number: 3 (lower is better) Translates to: ALKKQISESGPA*SIQQVPGQSGR Trigger: TCGTCCTGACTGTCCTGGAACTTGCTGTATAGATCAGGCTGGCCCCGACTCAGAGATCTGCTTCTTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | TTGGCATCACATGACAGATCTGAGGACTGTCTACTCTaGGGGCCTCACTCACTAGTCATGTCCCCACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LASHDRSEDCLL*GPHSLVMSPQA Trigger: GGCCTGTGGGGACATGACTAGTGAGTGAGGCCCGCAGAGTAGACAGTCCTCAGATCTGTCATGTGATGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | ACTTCTGAGCACGTTTCTGTCCCCACCTCCCACTGCTaGGATTACAGATGTAGGCCATTCCCAGCTATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSEHVSVPTSHC*DYRCRPFPAMG Trigger: GCCCATAGCTGGGAATGGCCTACATCTGTAATCCCAGCAGTGGGAGGTGGGGACAGAAACGTGCTCAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | CGGATTCTCTCCTTCCACAGAGTGGGCTCTAAGCATTaGACTGAGGCAGCAGGCTTCTCGGCAACTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RILSFHRVGSKH*TEAAGFSATAC Trigger: ACAAGCAGTTGCCGAGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTCTGTGGAAGGAGAGAATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | CACACCCTTAATCCCAGCCCTCAAGAAGCAGATCTCTaGGTCGGGGCCAGCCTGATCTATACAGCAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HTLNPSPQEADL*VGASLIYTASS Trigger: GGAACTTGCTGTATAGATCAGGCTGGCCCCGACTCAGAGATCTGCTTCTTGAGGGCTGGGATTAAGGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | GCCTCACTCACTAGTCATGTCCCCACAGGCCAGGGCTaGGTATGTGGTGTATCAGAACTTGCTCTAAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: ASLTSHVPTGQG*VCGVSELALRT Trigger: AGTCCTTAGAGCAAGTTCTGATACACCACATACCCAGCCCTGGCCTGTGGGGACATGACTAGTGAGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | CAGATGGACTTTACTCCTGAGCTTCCTCTCTGCCTCTaGATCGCTGCTGTCAAAGCCTGGTGTATACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QMDFTPELPLCL*IAAVKAWCIPT Trigger: GGTGGGTATACACCAGGCTTTGACAGCAGCGATCCAGAGGCAGAGAGGAAGCTCAGGAGTAAAGTCCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | TTGCCATCGTGTATGCACATGCATCAGATGCATGCTTaGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSCMHMHQMHA*RSWQPRGVGCP Trigger: AGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR TCA 72 bp | CTGTGGGTCTGGAAAAGTGTCCCCAGGCCGCCATGGTaGACTCAAGGCACTTGTTTGGAAGATGTGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LWVWKSVPRPPW*TQGTCLEDVTF Trigger: GAAAGTCACATCTTCCAAACAAGTGCCTTGAGTTCACCATGGCGGCCTGGGGACACTTTTCCAGACCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | CATACTTCTGAGCACGTTTCTGTCCCCACCTCCCACTaGTGGGATTACAGATGTAGGCCATTCCCAGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: HTSEHVSVPTSH*WDYRCRPFPAM Trigger: CATAGCTGGGAATGGCCTACATCTGTAATCCCAGCAGTGGGAGGTGGGGACAGAAACGTGCTCAGAAGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | TCCCTGCAGATGGACTTTACTCCTGAGCTTCCTCTCTaGCTCTGGATCGCTGCTGTCAAAGCCTGGTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: SLQMDFTPELPL*LWIAAVKAWCI Trigger: TATACACCAGGCTTTGACAGCAGCGATCCAGAGGCAGAGAGGAAGCTCAGGAGTAAAGTCCATCTGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | CATCTTGCCATCGTGTATGCACATGCATCAGATGCATaGTTGGCGCTCATGGCAGCCAAGAGGTGTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: HLAIVYAHASDA*LALMAAKRCWM Trigger: CATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | ACCAGGTTATCTCTGCTCTGCGTGGTTGCATACACCTaGCTAGGTGGCCCTCATACTTCTGAGCACGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TRLSLLCVVAYT*LGGPHTSEHVS Trigger: AGAAACGTGCTCAGAAGTATGAGGGCCACCTAGCCAGGTGTATGCAACCACGCAGAGCAGAGATAACCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | ATAAAAGAACAGGGCACGACCCTACAGCACCAACACTaGGAAGTGGGCACTGAGGGGTTCAATGACAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IKEQGTTLQHQH*EVGTEGFNDKL Trigger: GAGCTTGTCATTGAACCCCTCAGTGCCCACTTCCCAGTGTTGGTGCTGTAGGGTCGTGCCCTGTTCTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | CAGACTGGTTGCACCAGTTTTCAATCCCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACCCTGCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QTGCTSFQSHQQ*RSVPLSPPCQH Trigger: ATGCTGGCAGGGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGACCAGTCCACTCAGCAGGCACCACACACGAATCAGCAAGGGCAGTTCAATTTGATCCACTTGGACTaGAGCTTTGTGCAAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ADQSTQQAPHTNQQGQFNLIHLD*SFVQGE Trigger: CTCACCTTGCACAAAGCTCAAGTCCAAGTGGATCAA...ATTGAACTGCCCTTGCTGATTCGTGTGTGGTGCCTGCTGAGTGGACTGGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | CGCCATGGTGAACTCAAGGCACTTGTTTGGAAGATGTaGCTTTCTGGTCCTACTTCCCCGTTTCCAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RHGELKALVWKM*LSGPTSPFPAQ Trigger: CTGTGCTGGAAACGGGGAAGTAGGACCAGAAAGTCACATCTTCCAAACAAGTGCCTTGAGTTCACCATGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | CAAGTACAACGCGTGCTTTTAACTGCTGACCATCCCTaGAGATGGACTTTACTCCTGAGCTTCCTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QVQRVLLTADHP*RWTLLLSFLSA Trigger: GGCAGAGAGGAAGCTCAGGAGTAAAGTCCATCTGCAGGGATGGTCAGCAGTTAAAAGCACGCGTTGTACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | TTCTGTTCACGGACATCTTGCCATCGTGTATGCACATaGATCAGATGCATGCTTGGCGCTCATGGCAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FCSRTSCHRVCT*IRCMLGAHGSQ Trigger: TTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | ACAGTCTGTAGGAACGGATTCTCTCCTTCCACAGAGTaGGCTCTAAGCATTGAACTGAGGCAGCAGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVCRNGFSPSTE*ALSIELRQQAS Trigger: AGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTCTGTGGAAGGAGAGAATCCGTTCCTACAGACTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CCA 72 bp | TGTATGCACATGCATCAGATGCATGCTTGGCGCTCATaGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CMHMHQMHAWRS*QPRGVGCPEMK Trigger: CTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACCCACACGTTTATTCATCTCTCTCTCTCTCACACACACACACACACACACATGTCTGTGCACCACTaGCAGAGGTCAGAAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTFIHLSLSHTHTHTHMSVHH*QRSEEG Trigger: GCCCTCTTCTGACCTCTGCAAGTGGTGCACAGACAT...GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | TTGTTCTCAGTCCAGTCCACTATCAAACACCAAACATaGATCAGCAGCTGCAGACCAGTCCACTCAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LFSVQSTIKHQT*ISSCRPVHSAG Trigger: GCCTGCTGAGTGGACTGGTCTGCAGCTGCTGATTCATGTTTGGTGTTTGATAGTGGACTGGACTGAGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR GCA 72 bp | TGTAGACCATTCTGTTCACAAATTCAGAGATCTGCCTaGCTCTGCCTCCCAAGTGCTTGGCTTGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRPFCSQIQRSA*LCLPSAWLDTA Trigger: TGCAGTGTCAAGCCAAGCACTTGGGAGGCAGAGGCAGGCAGATCTCTGAATTTGTGAACAGAATGGTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | CATGCTTGGCGCTCATGGCAGCCAAGAGGTGTTGGATaGCCTGAAATGAAGGAAGTTACAGGCTTCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HAWRSWQPRGVG*PEMKEVTGFIC Trigger: ACAAATGAAGCCTGTAACTTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CCA 72 bp | CATCTTTCTGCATTTATCCTTCACGTGCTGGGGCTATaGGTGACACCACACCTGGTTAATTCAGTGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HLSAFILHVLGL*VTPHLVNSVLG Trigger: TCCCAGCACTGAATTAACCAGGTGTGGTGTCACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR CAA 90 bp | CATACCCACACGTTTATTCATCTCTCTCTCTCTCACACACACACACACACACACGAGCAGCCAACACTCTaGATCACTGAGCCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTFIHLSLSHTHTHTHEQPTL*ITEPSL Trigger: GAGAGATGGCTCAGTGATCAAGAGTGTTGGCTGCTC...GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTGGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGGTTAGACCTTCTACTTaGCACCAGGTTATCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NFGVAWWYTPLIPALKKQVRPST*HQVISA Trigger: AGCAGAGATAACCTGGTGCAAAGTAGAAGGTCTAAC...CTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | TTTCTGCATTTATCCTTCACGTGCTGGGGCTATGGGTaGCACCACACCTGGTTAATTCAGTGCTGGGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLHLSFTCWGYG*HHTWLIQCWDV Trigger: TACATCCCAGCACTGAATTAACCAGGTGTGGTGTCACCCATAGCCCCAGCACGTGAAGGATAAATGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | TTGGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCTaGAATGAAGGAAGTTACAGGCTTCATTTGTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LALMAAKRCWMP*NEGSYRLHLLV Trigger: GACTAACAAATGAAGCCTGTAACTTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | TTTCTGAGGAACCACCAGACTGATTTCCAGACTGGTTaGACCAGTTTTCAATCCCACCAGCAATGGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLRNHQTDFQTG*TSFQSHQQWRS Trigger: ACTCCTCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGTGGTTCCTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CCA 72 bp | GAAGGAAGTTACAGGCTTCATTTGTTAGTCACCATGTaGCTGCTGGGATTCAAACCTAGGTCCTCTGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EGSYRLHLLVTM*LLGFKPRSSGG Trigger: ACCTCCAGAGGACCTAGGTTTGAATCCCAGCAGCCACATGGTGACTAACAAATGAAGCCTGTAACTTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR TCA 72 bp | CTTGCTATGCAGCCAGGAATGACCTTGACTTTCAGATaGAAACTTTGGAGTGGCATGGTGGTACACACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAMQPGMTLTFR*KLWSGMVVHTL Trigger: AAGGGTGTGTACCACCATGCCACTCCAAAGTTTTCATCTGAAAGTCAAGGTCATTCCTGGCTGCATAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | TTTTGTTTTGGAGCTGGAGTCACATGTAGCCCAGCCTaGCATCAAACTTGCTATGCAGCCAGGAATGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCFGAGVTCSPA*HQTCYAARNDL Trigger: AAGGTCATTCCTGGCTGCATAGCAAGTTTGATGTCAGGCTGGGCTACATGTGACTCCAGCTCCAAAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GTTCATGTCACCAGACCCGGCTTTTCACAGGGATGCTaGAATGCTGCAGCACACACCTTATTATTAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VHVTRPGFSQGC*NAAAHTLLLTE Trigger: CTCAGTTAATAATAAGGTGTGTGCTGCAGCATTTCAGCATCCCTGTGAAAAGCCGGGTCTGGTGACATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR TCA 72 bp | GCTCATGGCAGCCAAGAGGTGTTGGATGCCCTGAAATaGAGGAAGTTACAGGCTTCATTTGTTAGTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: AHGSQEVLDALK*RKLQASFVSHH Trigger: ATGGTGACTAACAAATGAAGCCTGTAACTTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | TTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATaGACATGCATCAGATGCATGCTTGGCGCTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: FYFCSRTSCHRV*TCIRCMLGAHG Trigger: GCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGACTGTCTCCAGGATAGAAGGTGGAGAGTCAAAGAGGAAGATGCCATGTTCCCCAACTTGTTTCTaGGTCATGATGTTTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QMTVSRIEGGESKRKMPCSPTCF*VMMFVQ Trigger: CTGCACAAACATCATGACCAAGAAACAAGTTGGGGA...ACATGGCATCTTCCTCTTTGACTCTCCACCTTCTATCCTGGAGACAGTCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GTGCTGGGATGTAATGTCAGCAAGCGTTCTACCAACTaGGCTACAGTCAGTCTGAACACAAGACTTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGCNVSKRSTN*ATVSLNTRLHS Trigger: AGAATGAAGTCTTGTGTTCAGACTGACTGTAGCTCAGTTGGTAGAACGCTTGCTGACATTACATCCCAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GAGGCAGCAGGCTTCTCGGCAACTGCTTGTATCTGCTaGGCCACATTACTGGCTCTCAATTTACTTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EAAGFSATACIC*ATLLALNLLIF Trigger: AAAAATAAGTAAATTGAGAGCCAGTAATGTGGCTCAGCAGATACAAGCAGTTGCCGAGAAGCCTGCTGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | AATATAGCCCTGGCTGTCCTGGTCGACCTTACTTTTTaGGACAGGATTTCTCACCAACATGGGCCAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NIALAVLVDLTF*DRISHQHGPTK Trigger: TTTTGTTGGCCCATGTTGGTGAGAAATCCTGTCTCAAAAAGTAAGGTCGACCAGGACAGCCAGGGCTATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | AACTGTCTTAAATGTATCATCAGCAGATGCTTGACCTaGGACCTGTTCATGTATCTCTTGTCGGCTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: NCLKCIISRCLT*DLFMYLLSAPM Trigger: CATGGGAGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | AGCGTTTCTCTGTGTAGCACTGGCCATCTTGGAAGCTaGTCTGTAGACCATTCTGTTCACAAATTCAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVSLCSTGHLGS*SVDHSVHKFRD Trigger: ATCTCTGAATTTGTGAACAGAATGGTCTACAGAGCAGCTTCCAAGATGGCCAGTGCTACACAGAGAAACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR GCA 72 bp | TGTAGGCTGCTGTTTTGTCCTATTGACGGTGTCCTTTaGCTTACAGAAGCTTTTCAGTTTCAAGAGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CRLLFCPIDGVL*LTEAFQFQEVP Trigger: TGGGACCTCTTGAAACTGAAAAGCTTCTGTAAGGCAAAGGACACCGTCAATAGGACAAAACAGCAGCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | CAAAGAACTGTCTTAAATGTATCATCAGCAGATGCTTaGCCTGCGACCTGTTCATGTATCTCTTGTCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRTVLNVSSADA*PATCSCISCRL Trigger: GAGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | CACACACACACACACACACACGTTCCTATTTTGTACTaGACATTGCAGACAAGCATCAATAACGCACGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHVPILY*TLQTSINNARK Trigger: CTTTCGTGCGTTATTGATGCTTGTCTGCAATGTGCAGTACAAAATAGGAACGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | GTGCCCACAAGTGAACTTCAACAACATAGTGTAAGGTaGACCAATACATGCATGCAGTCATCGAAGAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VPTSELQQHSVR*TNTCMQSSKNV Trigger: GACATTCTTCGATGACTGCATGCATGTATTGGTTCACCTTACACTATGTTGTTGAAGTTCACTTGTGGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | ACGGTATTGCTGTCTTCGACACACCAGAAGAGGGTATaGGATTCCATTACAAATAGTTGTGAGCTACCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TVLLSSTHQKRV*DSITNSCELPC Trigger: ACATGGTAGCTCACAACTATTTGTAATGGAATCTCATACCCTCTTCTGGTGTGTCGAAGACAGCAATACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR GCA 72 bp | ACACCAAAGAACTGTCTTAAATGTATCATCAGCAGATaGTTGACCTGCGACCTGTTCATGTATCTCTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: TPKNCLKCIISR*LTCDLFMYLLS Trigger: CGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTTCTTTGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | GAGCCATTGGAGTTCTGTTCAGGAAAATTTTTCCTGTaGCAATGCATTCAAGGCAATTTCCCACGTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EPLEFCSGKFFL*QCIQGNFPRSL Trigger: AAGAGAACGTGGGAAATTGCCTTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR GCA 72 bp | AAACAACATGAGGCTTGCCAACAGGCAGCAAGAAATTaGAGGAACCTCATGAGTTCTTTGGTGAGTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KQHEACQQAARN*RNLMSSLVSFF Trigger: AAAGAAACTCACCAAAGAACTCATGAGGTTCCTGCAATTTCTTGCTGCCTGTTGGCAAGCCTCATGTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACTCCCAAGTGCTTGGCTaGACACTGCAACTCTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: SPKIFLFLFTDILPSCMHSQVLG*TLQLLT Trigger: TGTTAAGAGTTGCAGTGTCAAGCCAAGCACTTGGGA...GTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAATGCATTCAAGGCAATTTGATTCCATTCCATaGATTAGCCTGTTTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AIGVLFRKIFPVPMHSRQFDSIP*ISLFVS Trigger: AGAGACAAACAGGCTAATCAATGGAATGGAATCAAA...TTGCCTTGAATGCATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | GTGGGTTTATTTCTTGCGTCTTTGATTCCATTCCATTaGTTAGCCTGTTTGTCTCTGTGCCAATACCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: VGLFLASLIPFH*LACLSLCQYHV Trigger: TACATGGTATTGGCACAGAGACAAACAGGCTAATCAATGGAATGGAATCAAAGACGCAAGAAATAAACCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTGTATTTCTATACACGATGCATGTATACACATCTTCTATGAGAGTGGACGAAAAACAATTCTCATaGGCTCTCACTCTCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FCVFLYTMHVYTSSMRVDEKQFS*ALTLHL Trigger: GAGGTGGAGAGTGAGAGCCAATGAGAATTGTTTTTC...GTCCACTCTCATAGAAGATGTGTATACATGCATCGTGTATAGAAATACACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR TCA 72 bp | CAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTaGGCCATTGGAGTTCTGTTCAGGAAAATTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QEVPFINCYLTA*AIGVLFRKIFP Trigger: AGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CCA 72 bp | CCCATTTATCAATTGTTATCTTACAGCCTGAGCCATTaGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PIYQLLSYSLSH*SSVQENFSCAN Trigger: ATTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | TCAGCAAGCGTTCTACCAACTGAGCTACAGTCAGTCTaGACACAAGACTTCATTCTTTATATAAAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SASVLPTELQSV*TQDFILYIKTN Trigger: GTTTGTTTTTATATAAAGAATGAAGTCTTGTGTTCAGACTGACTGTAGCTCAGTTGGTAGAACGCTTGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR GCA 72 bp | TCCTTGATGACTAAGGATGTTGAACATTTCTTTAAGTaGTTCTTGGCATTCAAGATTCCTCTGCTGAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SLMTKDVEHFFK*FLAFKIPLLRI Trigger: AATTCTCAGCAGAGGAATCTTGAATGCCAAGAAGCACTTAAAGAAATGTTCAACATCCTTAGTCATCAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGTTCCACTGTATGGTTTaGGCTTCTTTGTCAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSFSVSRGPIYQLLSYSLFHCMV*ASLSKK Trigger: TTTCTTTGACAAAGAAGCCAAAACCATACAGTGGAA...CAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR TCA 72 bp | AAACAAATCCACTTTATTTACTTATTTGTGCACATGTaGGGTCAGAAAAACAATTCTCATTGGCTCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KQIHFIYLFVHM*GQKNNSHWLSL Trigger: GAGTGAGAGCCAATGAGAATTGTTTTTCTGACCTCACATGTGCACAAATAAGTAAATAAAGTGGATTTGTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | CCGAACCCAGGCCCTGCCCAAGAGCAGCCAACACTCTaGATCACTGAGCCATCTCTCCTGCTCAACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNPGPAQEQPTL*ITEPSLLLNTD Trigger: GTCTGTGTTGAGCAGGAGAGATGGCTCAGTGATCAAGAGTGTTGGCTGCTCTTGGGCAGGGCCTGGGTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTaGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGGTISGLVV*GSIREQAEQAR Trigger: CCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | CCTAGGTCTCCCACACCGCGTACTCCAGGCTTAGGTCTCCCACACCGTGTACTCCACTTCTTCATAACCTaGATCCACAAAGAGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRSPTPRTPGLGLPHRVLHFFIT*IHKELR Trigger: GCGCAGCTCTTTGTGGATGCAGGTTATGAAGAAGTG...GAGTACACGGTGTGGGAGACCTAAGCCTGGAGTACGCGGTGTGGGAGACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | TGTGGTGTATCAGAACTTGCTCTAAGGACTTGGGACTaGTGTGTTAGCACGGCCACACCCCTGCCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGVSELALRTWD*CVSTATPLPRQ Trigger: CTGCCTGGGCAGGGGTGTGGCCGTGCTAACACACAAGTCCCAAGTCCTTAGAGCAAGTTCTGATACACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR CCA 90 bp | TCCCACACCGCGTACTCCAGGCTTAGGTCTCCCACACCGTGTACTCCAGGCTGGGTAGTCAACTGCCCTTaGAGAAAAATCACAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SHTAYSRLRSPTPCTPGWVVNCP*RKITGI Trigger: TATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTAC...CCAGCCTGGAGTACACGGTGTGGGAGACCTAAGCCTGGAGTACGCGGTGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | ATGGGCAGATTCCTGGGATTCAACTTAGGTCCTCACTaGCATAATGCGCACCTGCTGTCTCCTCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGRFLGFNLGPH*HNAHLLSPQPQ Trigger: CTGGGGCTGAGGAGACAGCAGGTGCGCATTATGCAAGTGAGGACCTAAGTTGAATCCCAGGAATCTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | CCTAGGTCTCCCACACCGCGTACTCCAGGCTTAGGTCTCCCACACCGTGTACTCTTCATACTCCCTACATaGTCTCAACTCCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSPTPRTPGLGLPHRVLFILPT*SQLLKL Trigger: GAGTTTGAGGAGTTGAGATCATGTAGGGAGTATGAA...GAGTACACGGTGTGGGAGACCTAAGCCTGGAGTACGCGGTGTGGGAGACCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGATCTCTCGCATCTTCTCAGGGTaGACAGCTGAGAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVAWWYTPLIPALKKQISRIFSG*TAESTK Trigger: CTTTGTGCTCTCAGCTGTGCACCCTGAGAAGATGCG...AGAGATCTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | TTTGGGTGTTTGCCTGCATGTATGTCTGTGCACCACTaGCAGAGGTCAGAAGAGGGCACTCAATACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGCLPACMSVHH*QRSEEGTQYPG Trigger: CCCAGGGTATTGAGTGCCCTCTTCTGACCTCTGCAAGTGGTGCACAGACATACATGCAGGCAAACACCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | CATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGTTaGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HGLCISSCFLTC*SSSPDFLGDEQ Trigger: CTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAACAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | AAGTGTCCCCAGGCCGCCATGGTGAACTCAAGGCACTaGTTTGGAAGATGTGACTTTCTGGTCCTACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCPQAAMVNSRH*FGRCDFLVLLP Trigger: GGGAAGTAGGACCAGAAAGTCACATCTTCCAAACAAGTGCCTTGAGTTCACCATGGCGGCCTGGGGACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGCTCTAAGCATTGAACTGAGGCAGCAGGCTTCTCGGCAACTGCTTGTACTCAGGGTGCACAGCTaGGAGCACAAAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EWALSIELRQQASRQLLVLRVHS*EHKDQC Trigger: ACATTGATCTTTGTGCTCTCAGCTGTGCACCCTGAG...TACAAGCAGTTGCCGAGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTTGGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAGGAACTCAGGGTGCACAGCTaGGAGCACAAAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HAWRSWQPRGVGCPEMKELRVHS*EHKDQC Trigger: ACATTGATCTTTGTGCTCTCAGCTGTGCACCCTGAG...TTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | ACATCTTGCCATCGTGTATGCACATGCATCAGATGCATGCTTGGCGCTCATGGCCGCATCTTCTCAGGGTaGACAGCTGAGAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSCHRVCTCIRCMLGAHGRIFSG*TAESTK Trigger: CTTTGTGCTCTCAGCTGTGCACCCTGAGAAGATGCG...GCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | TCTACTCTGCGGGCCTCACTCACTAGTCATGTCCCCACAGGCCAGGGCTGGGTAGGAATAAGACACTTCTaGCTGGTTTTAATACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STLRASLTSHVPTGQGWVGIRHF*LVLIPC Trigger: ACAAGGTATTAAAACCAGGCAGAAGTGTCTTATTCC...TACCCAGCCCTGGCCTGTGGGGACATGACTAGTGAGTGAGGCCCGCAGAGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CAA 72 bp | AGCAGATGCTTGACCTGCGACCTGTTCATGTATCTCTaGTCGGCTCCCATGCTTCCCTTTGTGGAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLTCDLFMYL*SAPMLPFVEMD Trigger: ATCCATCTCCACAAAGGGAAGCATGGGAGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | TCTGGTCCTACTTCCCCGTTTCCAGCACAGTTCCTGTaGGCATCACATGACAGATCTGAGGACTGTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SGPTSPFPAQFL*ASHDRSEDCLL Trigger: GAGTAGACAGTCCTCAGATCTGTCATGTGATGCCAACAGGAACTGTGCTGGAAACGGGGAAGTAGGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAGGGTCTCATGTAGCCCAGGAACAAGCTGAGGGTCAGAATGACCTATGGAGGTCCCAGTTCTTCTaGGCCTCTTTTTCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGSHVAQEQAEGQNDLWRSQFF*ASFSSF Trigger: AAAACTGGAAAAAGAGGCTCAGAAGAACTGGGACCT...CCATAGGTCATTCTGACCCTCAGCTTGTTCCTGGGCTACATGAGACCCTGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGACACACTGGAACACTTTaGATCTCTCTGCATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: APCGWDHLWAGSLGFYKRHTGTL*ISLHCT Trigger: TGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTG...TCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCGCTCATGGCAGCCAAGAGGTGTTGGATGCCCTGAAATGAAGGAAGTTGCAGACACCAAAGCTTaGTCTCTTTTCAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRSWQPRGVGCPEMKEVADTKA*SLFSFS Trigger: GGAGAAACTGAAAAGAGACCAAGCTTTGGTGTCTGC...AACTTCCTTCATTTCAGGGCATCCAACACCTCTTGGCTGCCATGAGCGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CAA 72 bp | GGAGGTAGGATAAGCTCTGGGGTTAGACCTTCTACTTaGCACCAGGTTATCTCTGCTCTGCGTGGTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GGRISSGVRPST*HQVISALRGCI Trigger: TATGCAACCACGCAGAGCAGAGATAACCTGGTGCAAAGTAGAAGGTCTAACCCCAGAGCTTATCCTACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGAGGTCCCAGTTCTTCTaGGCCTCTTTTTCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFGVAWWYTPLIPALKKQRSQFF*ASFSSF Trigger: AAAACTGGAAAAAGAGGCTCAGAAGAACTGGGACCT...CTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCCAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGATCTCTAGTGCTAAGAATCCTTaGTTGCAGTCCTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAWWYTPLIPALKKQISSAKNP*LQSFPL Trigger: CAAAGGAAAGGACTGCAAGCAAGGATTCTTAGCACT...AGAGATCTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | CACAGTTCCTGTTGGCATCACATGACAGATCTGAGGACTGTCTACTCTGCGGGCCACACTGGAACACTTTaGATCTCTCTGCATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HSSCWHHMTDLRTVYSAGHTGTL*ISLHCT Trigger: TGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTG...GCCCGCAGAGTAGACAGTCCTCAGATCTGTCATGTGATGCCAACAGGAACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | GAGACAGGGTCTCATGTAGCCCAGGAACAAGCTGAGGGTCAGAATGACCTATGGCTAAGAATCCTTGCTTaGAGTCCTTTCCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETGSHVAQEQAEGQNDLWLRILA*SPFLWK Trigger: TTTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAG...CCATAGGTCATTCTGACCCTCAGCTTGTTCCTGGGCTACATGAGACCCTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGGGAATAAGACACTTCTaGCTGGTTTTAATACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVKNIPPWPLHQLLLPDLGIRHF*LVLIPC Trigger: ACAAGGTATTAAAACCAGGCAGAAGTGTCTTATTCC...CAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR CCA 90 bp | GGAACCACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCGTAGTCAACTGCCCTTaGAGAAAAATCACAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GTTRLISRLVAPVFNPTSVVNCP*RKITGI Trigger: TATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTAC...GCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGTGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCAATGGAAGGTCCCAGTTCTTCTaGGCCTCTTTTTCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLISRLVAPVFNPTSNGRSQFF*ASFSSF Trigger: AAAACTGGAAAAAGAGGCTCAGAAGAACTGGGACCT...TCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGCACTCAATACCCTGGGACTGGAATTACTGATGGAAGTGAGCTGCCATGTTCCAGTGTCTGTCCTTaGAAAAATTGGTACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGTQYPGTGITDGSELPCSSVCP*KNWYCF Trigger: GAAACAGTACCAATTTTTTCAAGGACAGACACTGGA...ACATGGCAGCTCACTTCCATCAGTAATTCCAGTCCCAGGGTATTGAGTGCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGCTCTAAGCATTGAACTGAGGCAGCAGGCTTCTCGGCAACTGCTTGTATGGTTCCATCTTGCCTaGCATAAAAATTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EWALSIELRQQASRQLLVWFHLA*HKNFLQ Trigger: TTGGAGAAAATTTTTATGTCAGGCAAGATGGAACCA...TACAAGCAGTTGCCGAGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTCATGTCACCAGACCCGGCTTTTCACAGGGATGCTGAAATGCTGCAGCACTGGTTCCATCTTGCCTaGCATAAAAATTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RFMSPDPAFHRDAEMLQHWFHLA*HKNFLQ Trigger: TTGGAGAAAATTTTTATGTCAGGCAAGATGGAACCA...GTGCTGCAGCATTTCAGCATCCCTGTGAAAAGCCGGGTCTGGTGACATGAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTCAATACCCTGGGACTGGAATTACTGATGGAAGTGAGCTGCCATGTCTAAGAATCCTTGCTTaGAGTCCTTTCCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGTQYPGTGITDGSELPCLRILA*SPFLWK Trigger: TTTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAG...ACATGGCAGCTCACTTCCATCAGTAATTCCAGTCCCAGGGTATTGAGTGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | GCCTGTTTGTCTCTGTGCCAATACCATGTAGTTTTTAACCACGACTTTTCTGTGCTCAGGGTGCACAGCTaGGAGCACAAAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ACLSLCQYHVVFNHDFSVLRVHS*EHKDQC Trigger: ACATTGATCTTTGTGCTCTCAGCTGTGCACCCTGAG...CACAGAAAAGTCGTGGTTAAAAACTACATGGTATTGGCACAGAGACAAACAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CCA 90 bp | CATACCCACACGTTTATTCATCTCTCTCTCTCTCACACACACACACACACACACGCAGACACCAAAGCTTaGTCTCTTTTCAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTFIHLSLSHTHTHTHADTKA*SLFSFS Trigger: GGAGAAACTGAAAAGAGACCAAGCTTTGGTGTCTGC...GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGAATAAACGTGTGGGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | ATTTGTGCACATGTGAGGTCAGAAAAACAATTCTCATaGGCTCTCACTCTCCACCTCTCTGAAGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICAHVRSEKQFS*ALTLHLSEASL Trigger: GAGAGAGGCTTCAGAGAGGTGGAGAGTGAGAGCCAATGAGAATTGTTTTTCTGACCTCACATGTGCACAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | CCACCCTGCCAGCATCTGCTGTCATCTGAGGTTTTGATCTTAGCCATTTTGATTCACACTGGAACACTTTaGATCTCTCTGCATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PPCQHLLSSEVLILAILIHTGTL*ISLHCT Trigger: TGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTG...AATCAAAATGGCTAAGATCAAAACCTCAGATGACAGCAGATGCTGGCAGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACATGCCATGCTTGGCGCTCATaGCAGCCAAGAGGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKYFYFCSRTSCHRVCTCHAWRS*QPRGVG Trigger: TCCAACACCTCTTGGCTGCCATGAGCGCCAAGCATG...GCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226986.2 |
||
| 3UTR CAA 72 bp | CCAAAGAACTGTCTTAAATGTATCATCAGCAGATGCTaGACCTGCGACCTGTTCATGTATCTCTTGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKNCLKCIISRC*TCDLFMYLLSA Trigger: AGCCGACAAGAGATACATGAACAGGTCGCAGGTCAAGCATCTGCTGATGATACATTTAAGACAGTTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| 3UTR CAA 72 bp | CTCTCTCACACACACACACACACACACGTTCCTATTTaGTACTGCACATTGCAGACAAGCATCAATAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHTHTHTHVPI*YCTLQTSINNA Trigger: TGCGTTATTGATGCTTGTCTGCAATGTGCAGTACAAAATAGGAACGTGTGTGTGTGTGTGTGTGTGAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCCGCATCTTCTCAGGGTaGACAGCTGAGAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEAFQFQEVPFINCYLTARIFSG*TAESTK Trigger: CTTTGTGCTCTCAGCTGTGCACCCTGAGAAGATGCG...GGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCAATGGAGGAATAAGACACTTCTaGCTGGTTTTAATACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRLISRLVAPVFNPTSNGGIRHF*LVLIPC Trigger: ACAAGGTATTAAAACCAGGCAGAAGTGTCTTATTCC...TCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CAA 72 bp | GGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTaGTTTCTTGGTCATGATGTTTGTGCAGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSRINPFLPN*FLGHDVCAGIE Trigger: TTCTATTCCTGCACAAACATCATGACCAAGAAACAAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS-3UTR TCA 90 bp | GCCTGTTTGTCTCTGTGCCAATACCATGTAGTTTTTAACCACGACTTTTCTGTGTCCAGTGTCTGTCCTTaGAAAAATTGGTACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACLSLCQYHVVFNHDFSVSSVCP*KNWYCF Trigger: GAAACAGTACCAATTTTTTCAAGGACAGACACTGGA...CACAGAAAAGTCGTGGTTAAAAACTACATGGTATTGGCACAGAGACAAACAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAATCTAAAAGAAAACAACATGAGGCTTGCCAACAGGCAGCAAGAAATTGCAGACACCAAAGCTTaGTCTCTTTTCAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFNLKENNMRLANRQQEIADTKA*SLFSFS Trigger: GGAGAAACTGAAAAGAGACCAAGCTTTGGTGTCTGC...AATTTCTTGCTGCCTGTTGGCAAGCCTCATGTTGTTTTCTTTTAGATTGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCAATCTAAAAGAAAACAACATGAGGCTTGCCAACAGGCAGCAAGAAATTTTCATACTCCCTACATaGTCTCAACTCCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QFNLKENNMRLANRQQEIFILPT*SQLLKL Trigger: GAGTTTGAGGAGTTGAGATCATGTAGGGAGTATGAA...AATTTCTTGCTGCCTGTTGGCAAGCCTCATGTTGTTTTCTTTTAGATTGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CAA 72 bp | TGTGGGTTTATTTCTTGCGTCTTTGATTCCATTCCATaGATTAGCCTGTTTGTCTCTGTGCCAATACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CGFISCVFDSIP*ISLFVSVPIPC Trigger: ACATGGTATTGGCACAGAGACAAACAGGCTAATCAATGGAATGGAATCAAAGACGCAAGAAATAAACCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR TCA 90 bp | CCAAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACATGTTCATACTCCCTACATaGTCTCAACTCCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PKIFLFLFTDILPSCMHMFILPT*SQLLKL Trigger: GAGTTTGAGGAGTTGAGATCATGTAGGGAGTATGAA...CATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGAGTGCTAAGAATCCTTaGTTGCAGTCCTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSFSVSRGPIYQLLSYSLSAKNP*LQSFPL Trigger: CAAAGGAAAGGACTGCAAGCAAGGATTCTTAGCACT...CAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| 3UTR CAA 72 bp | TCTCCAAAAATATTTTTATTTCTGTTCACGGACATCTaGCCATCGTGTATGCACATGCATCAGATGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKIFLFLFTDI*PSCMHMHQMHA Trigger: AGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| 3UTR CAA 72 bp | ATTATATTTGGTTTTATGTTAAGGTCCTTGATCCACTaGGACTTGAGCTTTGTGCAAGGTGAGACGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIFGFMLRSLIH*DLSFVQGETYG Trigger: TCCATACGTCTCACCTTGCACAAAGCTCAAGTCCAAGTGGATCAAGGACCTTAACATAAAACCAAATATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CAA 72 bp | TCCCATTTATCAATTGTTATCTTACAGCCTGAGCCATaGGAGTTCTGTTCAGGAAAATTTTTCCTGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHLSIVILQPEP*EFCSGKFFLCQ Trigger: TTGGCACAGGAAAAATTTTCCTGAACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| 3UTR CAA 72 bp | AGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATaGTTATCTTACAGCCTGAGCCATTGGAGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSVSRGPIYQ*LSYSLSHWSSV Trigger: AACAGAACTCCAATGGCTCAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGCTAAGAATCCTTGCTTaGAGTCCTTTCCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSFSVSRGPIYQLLSYSLLRILA*SPFLWK Trigger: TTTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAG...CAGGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACATGTGGTTCCATCTTGCCTaGCATAAAAATTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKIFLFLFTDILPSCMHMWFHLA*HKNFLQ Trigger: TTGGAGAAAATTTTTATGTCAGGCAAGATGGAACCA...CATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000226986.2 ENSMUST00000228727.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGCTTTTCAGTTTCAAGAGGTCCCATTTATCAATTGTTATCTTACAGCCTGGTTCCATCTTGCCTaGCATAAAAATTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEAFQFQEVPFINCYLTAWFHLA*HKNFLQ Trigger: TTGGAGAAAATTTTTATGTCAGGCAAGATGGAACCA...GGCTGTAAGATAACAATTGATAAATGGGACCTCTTGAAACTGAAAAGCTTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR GCA 90 bp | AAAAATATTTTTATTTCTGTTCACGGACATCTTGCCATCGTGTATGCACATGCAGGAATAAGACACTTCTaGCTGGTTTTAATACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNIFISVHGHLAIVYAHAGIRHF*LVLIPC Trigger: ACAAGGTATTAAAACCAGGCAGAAGTGTCTTATTCC...TGCATGTGCATACACGATGGCAAGATGTCCGTGAACAGAAATAAAAATATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000226986.2 ENSMUST00000228727.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGACGTAGTCAACTGCCCTaGGAGAAAAATCACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: APCGWDHLWAGSLGFYKRRSQLP*EKNHRH Trigger: ATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACG...TCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS-3UTR CAA 90 bp | GTCCCCACAGGCCAGGGCTGGGTATGTGGTGTATCAGAACTTGCTCTAAGGACTCGTAGTCAACTGCCCTaGGAGAAAAATCACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VPTGQGWVCGVSELALRTRSQLP*EKNHRH Trigger: ATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACG...AGTCCTTAGAGCAAGTTCTGATACACCACATACCCAGCCCTGGCCTGTGGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
||
| CDS CCA 90 bp | AGCACAAAGATCAATGTAACGGCATCCACAGACTCTGGTGGGACGTaGTCAAGCAGGTCGTCTCTAGTGAGGTCACACTGGAACACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: STKINVTASTDSGGT*SSRSSLVRSHWNTL Trigger: CAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGAGTCTGTGGATGCCGTTACATTGATCTTTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS CCA 90 bp | TCTGGTGGGACGTGGTCAAGCAGGTCGTCTCTAGTGAGGTCACACTaGAACACTTTGCATCTCTCTGCATTGTACAAAGGATGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGTWSSRSSLVRSH*NTLHLSALYKGCCS Trigger: GGAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227595.2 |
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| CDS-3UTR CAA 90 bp | ACACCCCTGCCCAGGCAGCACTCCACTAATGGTGCAGTCAAGTACACAGAGCAGATTGTACAAAGGATGTaGCTTCACGTAGTCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPLPRQHSTNGAVKYTEQIVQRM*LHVVNC Trigger: GCAGTTGACTACGTGAAGCAACATCCTTTGTACAAT...CTGCTCTGTGTACTTGACTGCACCATTAGTGGAGTGCTGCCTGGGCAGGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS CCA 90 bp | TCTGGTGGGACGTGGTCAAGCAGGTCGTCTCTAGTGAGGTCACACTaGAACACTTTGCATCTCTCTGCATTGTACAAAGGATGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGTWSSRSSLVRSH*NTLHLSALYKGCCF Trigger: GAAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | GAGTGGGCTCTAAGCATTGAACTGAGGCAGCAGGCTTCTCGGCAACTGCTTGTAGCTAAGAATCCTTGCTaGCAGTCCTTTCCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EWALSIELRQQASRQLLVAKNPC*QSFPLE Trigger: TTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAGC...TACAAGCAGTTGCCGAGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGGCTCTAAGCATTGAACTGAGGCAGCAGGCTTCTCGGCAACTGCTTGTAAGCAGACACCAAAGCTaGGTCTCTTTTCAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EWALSIELRQQASRQLLVSRHQS*VSFQFL Trigger: GAGAAACTGAAAAGAGACCAAGCTTTGGTGTCTGCT...TACAAGCAGTTGCCGAGAAGCCTGCTGCCTCAGTTCAATGCTTAGAGCCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS-3UTR CAA 90 bp | CCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGATTGTACAAAGGATGTaGCTTCACGTAGTCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVKNIPPWPLHQLLLPDLIVQRM*LHVVNC Trigger: GCAGTTGACTACGTGAAGCAACATCCTTTGTACAAT...CAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS GCA 90 bp | CAGGTCGTCTCTAGTGAGGTCACACTGGAACACTTTGCATCTCTCTaGATTGTACAAAGGATGTTGCTTCACGTAGTCAACTGCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVVSSEVTLEHFASL*IVQRMLLHVVNCPW Trigger: CCAAGGGCAGTTGACTACGTGAAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | TTCGAGACAGGGTCTCATGTAGCCCAGGAACAAGCTGAGGGTCAGAATGACCTAGCTAAGAATCCTTGCTaGCAGTCCTTTCCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FETGSHVAQEQAEGQNDLAKNPC*QSFPLE Trigger: TTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAGC...TAGGTCATTCTGACCCTCAGCTTGTTCCTGGGCTACATGAGACCCTGTCTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | AACTTTGGAGTGGCATGGTGGTACACACCCTTAATCCCAGCCCTCAAGAAGCAGTTGCATCTCTCTGCATaGTACAAAGGATGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NFGVAWWYTPLIPALKKQLHLSA*YKGCCF Trigger: GAAGCAACATCCTTTGTACAATGCAGAGAGATGCAA...CTGCTTCTTGAGGGCTGGGATTAAGGGTGTGTACCACCATGCCACTCCAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS TCA 90 bp | GCCAGCCTCCAACAAAGTCAATTTTTGACCTTCATACTCCCTACATaGTCTCAACTCCTCAAACTCTCTGGTGGTCCAGTGTCTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLQQSQFLTFILPT*SQLLKLSGGPVSVL Trigger: AAGGACAGACACTGGACCACCAGAGAGTTTGAGGAGTTGAGATCATGTAGGGAGTATGAAGGTCAAAAATTGACTTTGTTGGAGGCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS TCA 90 bp | CACTTTGCATCTCTCTGCATTGTACAAAGGATGTTGCTCCCTACATaGTCTCAACTCCTCAAACTCTCTGGTGGTCCAGTGTCTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFASLCIVQRMLLPT*SQLLKLSGGPVSVL Trigger: AAGGACAGACACTGGACCACCAGAGAGTTTGAGGAGTTGAGATCATGTAGGGAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227595.2 |
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| CDS-3UTR CAA 90 bp | ACCAGACTGATTTCCAGACTGGTTGCACCAGTTTTCAATCCCACCAGCAATGGAAGCAGACACCAAAGCTaGGTCTCTTTTCAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRLISRLVAPVFNPTSNGSRHQS*VSFQFL Trigger: GAGAAACTGAAAAGAGACCAAGCTTTGGTGTCTGCT...TCCATTGCTGGTGGGATTGAAAACTGGTGCAACCAGTCTGGAAATCAGTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR CAA 90 bp | CCACCCTGCCAGCATCTGCTGTCATCTGAGGTTTTGATCTTAGCCATTTTGATTGCTAAGAATCCTTGCTaGCAGTCCTTTCCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPCQHLLSSEVLILAILIAKNPC*QSFPLE Trigger: TTCCAAAGGAAAGGACTGCAAGCAAGGATTCTTAGC...AATCAAAATGGCTAAGATCAAAACCTCAGATGACAGCAGATGCTGGCAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR CAA 90 bp | ACATCTTGCCATCGTGTATGCACATGCATCAGATGCATGCTTGGCGCTCATGGCCAACAAAGTCAATTTTaGACCTTCATACTCCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: TSCHRVCTCIRCMLGAHGQQSQF*TFILPT Trigger: TGTAGGGAGTATGAAGGTCAAAAATTGACTTTGTTG...GCCATGAGCGCCAAGCATGCATCTGATGCATGTGCATACACGATGGCAAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCTGTGCCAGCAAATTTAGTCAAGGAGTTTTGCCTGTGGGTCTGGAAATTGCATCTCTCTGCATaGTACAAAGGATGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QCSVPANLVKEFCLWVWKLHLSA*YKGCCF Trigger: GAAGCAACATCCTTTGTACAATGCAGAGAGATGCAA...TTTCCAGACCCACAGGCAAAACTCCTTGACTAAATTTGCTGGCACAGAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS GCA 90 bp | GCATCTCTCTGCATTGTACAAAGGATGTTGCTTCACGTAGTCAACTaGCCTTGGAGAAAAATCACAGGCATAGGCAAAGAGATTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLCIVQRMLLHVVN*PWRKITGIGKEIQV Trigger: GACTTGAATCTCTTTGCCTATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACGTGAAGCAACATCCTTTGTACAATGCAGAGAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | TCTACATGCAGAAGACCAGTAGTTGGAACAGCACCATTTGTTGAAGATGCTTTCCGTAGTCAACTGCCCTaGGAGAAAAATCACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: STCRRPVVGTAPFVEDAFRSQLP*EKNHRH Trigger: ATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACG...GAAAGCATCTTCAACAAATGGTGCTGTTCCAACTACTGGTCTTCTGCATGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS CCA 90 bp | CTCTGCATTGTACAAAGGATGTTGCTTCACGTAGTCAACTGCCCTTaGAGAAAAATCACAGGCATAGGCAAAGAGATTCAAGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCIVQRMLLHVVNCP*RKITGIGKEIQVFF Trigger: GAAGAAGACTTGAATCTCTTTGCCTATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACGTGAAGCAACATCCTTTGTACAATGCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | GTTCCAGGACAGTCAGGACGACACTGTCTAAAACAAACCACTCTTTTTAACACTTCACACTGGAACACTTaGCATCTCTCTGCATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGQSGRHCLKQTTLFNTSHWNT*HLSALY Trigger: GTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGA...AGTGTTAAAAAGAGTGGTTTGTTTTAGACAGTGTCGTCCTGACTGTCCTGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
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| CDS-3UTR CAA 90 bp | GGAGGTATCCTTAACAACAGAGCCATCTTTCCAGTCTTCCACCTTACTTTCTTTTCACACTGGAACACTTaGCATCTCTCTGCATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GGILNNRAIFPVFHLTFFSHWNT*HLSALY Trigger: GTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGA...AAAGAAAGTAAGGTGGAAGACTGGAAAGATGGCTCTGTTGTTAAGGATACCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228727.2 |
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| CDS-3UTR CAA 90 bp | TTTGTGCAAGGTGAGACGTATGGATCAATTTGCATTCTACATGCAGAAGACCAGATTGTACAAAGGATGTaGCTTCACGTAGTCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FVQGETYGSICILHAEDQIVQRM*LHVVNC Trigger: GCAGTTGACTACGTGAAGCAACATCCTTTGTACAAT...CTGGTCTTCTGCATGTAGAATGCAAATTGATCCATACGTCTCACCTTGCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCAAGAAATTGCAGGAACCTCATGAGTTCTTTGGTGAGTTTCTTTCTATGTTGCATCTCTCTGCATaGTACAAAGGATGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSKKLQEPHEFFGEFLSMLHLSA*YKGCCF Trigger: GAAGCAACATCCTTTGTACAATGCAGAGAGATGCAA...CATAGAAAGAAACTCACCAAAGAACTCATGAGGTTCCTGCAATTTCTTGCTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAATTGCAGGAACCTCATGAGTTCTTTGGTGAGTTTCTTTCTATGAAGTGCTCACACTGGAACACTTaGCATCTCTCTGCATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KKLQEPHEFFGEFLSMKCSHWNT*HLSALY Trigger: GTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGA...GCACTTCATAGAAAGAAACTCACCAAAGAACTCATGAGGTTCCTGCAATTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCAAGGTGAGACGTATGGATCAATTTGCATTCTACATGCAGAAGACCAGCAACAAAGTCAATTTTaGACCTTCATACTCCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FVQGETYGSICILHAEDQQQSQF*TFILPT Trigger: TGTAGGGAGTATGAAGGTCAAAAATTGACTTTGTTG...CTGGTCTTCTGCATGTAGAATGCAAATTGATCCATACGTCTCACCTTGCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227777.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTGTATTTCTATACACGATGCATGTATACACATCTTCTATGAGAGTGGACCAACAAAGTCAATTTTaGACCTTCATACTCCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FCVFLYTMHVYTSSMRVDQQSQF*TFILPT Trigger: TGTAGGGAGTATGAAGGTCAAAAATTGACTTTGTTG...GTCCACTCTCATAGAAGATGTGTATACATGCATCGTGTATAGAAATACACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055303.5 |
||
| CDS TCA 72 bp | GGGGCTGGGTCCTTCGGAGGCTTCCGGAACTTGCTCTaGAGGAAAACTCGAGGCACACACAGGCCCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GAGSFGGFRNLL*RKTRGTHRPSF Trigger: AAAAGAGGGCCTGTGTGTGCCTCGAGTTTTCCTTCAGAGCAAGTTCCGGAAGCCTCCGAAGGACCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 |
||
| CDS CCA 72 bp | ATCAATGTAACGGCATCCACAGACTCTGGTGGGACGTaGTCAAGCAGGTCGTCTCTAGTGAGGTCACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: INVTASTDSGGT*SSRSSLVRSHW Trigger: CCAGTGTGACCTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGAGTCTGTGGATGCCGTTACATTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
||
| CDS CCA 72 bp | CACAAAGATCAATGTAACGGCATCCACAGACTCTGGTaGGACGTGGTCAAGCAGGTCGTCTCTAGTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HKDQCNGIHRLW*DVVKQVVSSEV Trigger: GACCTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGAGTCTGTGGATGCCGTTACATTGATCTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
||
| CDS CCA 72 bp | GAGCACAAAGATCAATGTAACGGCATCCACAGACTCTaGTGGGACGTGGTCAAGCAGGTCGTCTCTAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EHKDQCNGIHRL*WDVVKQVVSSE Trigger: CTCACTAGAGACGACCTGCTTGACCACGTCCCACCAGAGTCTGTGGATGCCGTTACATTGATCTTTGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS CAA 72 bp | AGCAGGTCGTCTCTAGTGAGGTCACACTGGAACACTTaGCATCTCTCTGCATTGTACAAAGGATGTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSSLVRSHWNT*HLSALYKGCCS Trigger: GGAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227595.2 |
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| CDS CAA 90 bp | ACGTGGTCAAGCAGGTCGTCTCTAGTGAGGTCACACTGGAACACTTaGCATCTCTCTGCATTGTACAAAGGATGTTGCTCCCTACATGAT | + |
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Preference number: 6 (lower is better) Translates to: TWSSRSSLVRSHWNT*HLSALYKGCCSLHD Trigger: ATCATGTAGGGAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCTTGACCACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227595.2 |
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| CDS TCA 72 bp | CCAACCCCACAGCCAGCCTCCAACAAAGTCAATTTTTaGCCTTCATACTCCCTACATGATCTCAACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PTPQPASNKVNF*PSYSLHDLNSS Trigger: TGAGGAGTTGAGATCATGTAGGGAGTATGAAGGTCAAAAATTGACTTTGTTGGAGGCTGGCTGTGGGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS CAA 72 bp | AGCAGGTCGTCTCTAGTGAGGTCACACTGGAACACTTaGCATCTCTCTGCATTGTACAAAGGATGTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRSSLVRSHWNT*HLSALYKGCCF Trigger: GAAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGAGACGACCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS GCA 72 bp | TCGAAACACATACTCGTTCACCACTTCTTCATAACCTaGATCCACAAAGAGCTGCGCCAGGAATTCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKHILVHHFFIT*IHKELRQEFIS Trigger: ACTGATGAATTCCTGGCGCAGCTCTTTGTGGATGCAGGTTATGAAGAAGTGGTGAACGAGTATGTGTTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055303.5 ENSMUST00000227595.2 |
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| CDS GCA 72 bp | TGCATTGTACAAAGGATGTTGCTTCACGTAGTCAACTaGCCTTGGAGAAAAATCACAGGCATAGGCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CIVQRMLLHVVN*PWRKITGIGKE Trigger: CTCTTTGCCTATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACGTGAAGCAACATCCTTTGTACAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS GCA 72 bp | TCTAGTGAGGTCACACTGGAACACTTTGCATCTCTCTaGATTGTACAAAGGATGTTGCTTCACGTAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SSEVTLEHFASL*IVQRMLLHVVN Trigger: GTTGACTACGTGAAGCAACATCCTTTGTACAATGCAGAGAGATGCAAAGTGTTCCAGTGTGACCTCACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS CCA 72 bp | GTACAAAGGATGTTGCTTCACGTAGTCAACTGCCCTTaGAGAAAAATCACAGGCATAGGCAAAGAGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: VQRMLLHVVNCP*RKITGIGKEIQ Trigger: TTGAATCTCTTTGCCTATGCCTGTGATTTTTCTCCAAGGGCAGTTGACTACGTGAAGCAACATCCTTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055303.5 ENSMUST00000227777.2 ENSMUST00000228181.2 ENSMUST00000228727.2 |
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| CDS GCA 72 bp | GATCATTCAGCCCGTAGTCACGGAATAAGACACTTCTaGCTGGTTTTAATACCTTGTACACGTTTAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: DHSARSHGIRHF*LVLIPCTRLVR Trigger: TCTTACTAAACGTGTACAAGGTATTAAAACCAGGCAGAAGTGTCTTATTCCGTGACTACGGGCTGAATGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055303.5 ENSMUST00000226986.2 ENSMUST00000227595.2 ENSMUST00000227777.2 ENSMUST00000228727.2 |
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