Pregenerated sensors for METTL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055660Ensembl transcript IDs: ENSMUST00000171284.3, ENSMUST00000234990.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGCCTGACAGTTGCCCCTCTGCTGTTGAGCTCAGCTTTCTCCTaGTTTTGCAGCAGTGTACACCAAACGCAAATCTTAACAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: CGLTVAPLLLSSAFS*FCSSVHQTQILTDS Trigger: AGAGTCTGTTAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAACAGCAGAGGGGCAACTGTCAGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 90 bp | TTGAAGGCTAACCTGGGCTACATTGTGAGTGTCCATCCAACTAGATaGACTGTCTCTAGAGTTGGGAGCTTGAAAAGGGAGACTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LKANLGYIVSVHPTR*TVSRVGSLKRETWD Trigger: GTCCCAAGTCTCCCTTTTCAAGCTCCCAACTCTAGAGACAGTTCATCTAGTTGGATGGACACTCACAATGTAGCCCAGGTTAGCCTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 90 bp | CTGTCAACACTGGATACTAGGCCTGTCAAACCTGAAAGACCAGTGTaGACAATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: LSTLDTRPVKPERPV*TMLLLCSPLLQVIC Trigger: ACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACATTGTCCACACTGGTCTTTCAGGTTTGACAGGCCTAGTATCCAGTGTTGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 90 bp | TACCAGGAAACCATTTTAGCTTCCTCATCCCTGGGACAGCACACCTaGCATAAACAACTTAAGGGAAGGAAAGCTCAGTTTTGCTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: YQETILASSSLGQHT*HKQLKGRKAQFCSV Trigger: AACTGAGCAAAACTGAGCTTTCCTTCCCTTAAGTTGTTTATGTCAGGTGTGCTGTCCCAGGGATGAGGAAGCTAAAATGGTTTCCTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 90 bp | TGTCCAAGTACTTTCAGTCTAACAATCCCCTTAGTAAGCAGCGAGTaGTTTATATACAGTGTCAGTGGTTTTCCTGAATGCTCAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: CPSTFSLTIPLVSSE*FIYSVSGFPECSVE Trigger: TTCCACTGAGCATTCAGGAAAACCACTGACACTGTATATAAACCACTCGCTGCTTACTAAGGGGATTGTTAGACTGAAAGTACTTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 90 bp | GCAACCACCTGTAACTACAGTTCTAGAGTATCCAACATCATCTTCTaGCATTTACTGACACAAGGCACACATGTAGCACACATACATACA | + |
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Preference number: 1 (lower is better) Translates to: ATTCNYSSRVSNIIF*HLLTQGTHVAHIHT Trigger: TGTATGTATGTGTGCTACATGTGTGCCTTGTGTCAGTAAATGTCAGAAGATGATGTTGGATACTCTAGAACTGTAGTTACAGGTGGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 90 bp | CCATCACATGGAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTaGGATGGTGCTGGTATCTATATATTGTGTTGCATAAGTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: PSHGAQGALPFGLYI*DGAGIYILCCISLY Trigger: ATACAAACTTATGCAACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCCATGTGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 90 bp | ACATGGAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTGAGATaGTGCTGGTATCTATATATTGTGTTGCATAAGTTTGTATGTTTC | + |
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Preference number: 1 (lower is better) Translates to: TWSPRGSAFWIIYLR*CWYLYIVLHKFVCF Trigger: GAAACATACAAACTTATGCAACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCCATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 90 bp | ACTACCTGTACTCAAGTGTTTTGTAGAACTTCCTTAAAATGTGACTaGGTAGATAAACCCAATGGCTTAGTCAAAGTTGTTACCAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TTCTQVFCRTSLKCD*VDKPNGLVKVVTSP Trigger: TGGGCTGGTAACAACTTTGACTAAGCCATTGGGTTTATCTACTCAGTCACATTTTAAGGAAGTTCTACAAAACACTTGAGTACAGGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 90 bp | AACCTCAGTCCAAAGCATATTTTGGCACATTGGTCTGCCATGCATTaGTATGCTACCTCATATAACCTTATAAACAAGGAGAGAGATTAT | + |
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Preference number: 1 (lower is better) Translates to: NLSPKHILAHWSAMH*YATSYNLINKERDY Trigger: ATAATCTCTCTCCTTGTTTATAAGGTTATATGAGGTAGCATACCAATGCATGGCAGACCAATGTGCCAAAATATGCTTTGGACTGAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 90 bp | GTGTTCTTGAAACTAAAAATTCTTTCAGGGTTTACATCTAGGGCCTaGTATAATGATGCATGCCTGGAACCCAATGTAAGAAGATTAAAG | + |
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Preference number: 1 (lower is better) Translates to: VFLKLKILSGFTSRA*YNDACLEPNVRRLK Trigger: CTTTAATCTTCTTACATTGGGTTCCAGGCATGCATCATTATACCAGGCCCTAGATGTAAACCCTGAAAGAATTTTTAGTTTCAAGAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCATGGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAGCAAAAGTATGGACAGACAACATGAGTTaGACTGTGGAATCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ESMAKLCGLHDSQRAKVWTDNMS*TVESPP Trigger: AGGGGGAGATTCCACAGTCCAACTCATGTTGTCTGT...CCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAATTGAAAAGGGAGACTTaGGACCCCAGGGAAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: MLLLCSPLLQVICSYLVQLKRET*DPREDE Trigger: CTCATCTTCCCTGGGGTCCCAAGTCTCCCTTTTCAA...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTGAGATGGTGCTGGTATCTAGTGGTTTTCCTGAATaGTCAGTGGAAGAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EPKGLCLLDYISEMVLVSSGFPE*SVEEAR Trigger: TCTGGCTTCTTCCACTGAGCATTCAGGAAAACCACT...AGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAGCACTTCCGAGGATGTaGCAAGTTGTAGAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: MLLLCSPLLQVICSYLVQALPRM*QVVEKI Trigger: GATTTTCTCTACAACTTGTCACATCCTCGGAAGTGC...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGGATGATAAGGACATAGAATTCCTTCAAGTTAATGATACACTTCAGTCCCCACACCAGTTATTCTaGGGACCTGCTCCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: PQDDKDIEFLQVNDTLQSPHQLF*GPAPSS Trigger: AGATGAGGGAGCAGGTCCTCAGAATAACTGGTGTGG...GGACTGAAGTGTATCATTAACTTGAAGGAATTCTATGTCCTTATCATCCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCTCAGCTTTCTCCTGGTTTTGCAGCAGTGTACACCAAACGCAAATCTTACTGGGACAGCACACCTaGCATAAACAACTTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSSAFSWFCSSVHQTQILLGQHT*HKQLKG Trigger: TCCCTTAAGTTGTTTATGTCAGGTGTGCTGTCCCAG...TAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAGATGCTCTTCTAAAGAATaGCTCACAATCATCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VAPLFSTPTSHLFLPGPRCSSKE*LTIIPP Trigger: TGGAGGGATGATTGTGAGCCATTCTTTAGAAGAGCA...TCTTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTACATCGATGCTAACCGATGCTGGGAAAGATGGAGGAGACAGATGCTTAAAGATATTGGTAAACTaGGAACTGTACACACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: PGTSMLTDAGKDGGDRCLKILVN*ELYTQC Trigger: GCACTGTGTGTACAGTTCCCAGTTTACCAATATCTT...TAAGCATCTGTCTCCTCCATCTTTCCCAGCATCGGTTAGCATCGATGTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTGAGATGGTGCTGGTATCTTCCAAGAATTTGGATTaGTCTTGGGAGGAAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: EPKGLCLLDYISEMVLVSSKNLD*SWEENL Trigger: CAGATTTTCCTCCCAAGATCAATCCAAATTCTTGGA...AGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CAA 90 bp | AAAGAATGGCTCACAATCATCCCTCCAGGGGATCTAATGATTCTTTaGGCCTATGCAGGCATCAGGCACATACATAGTGCACATACATAT | + |
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Preference number: 2 (lower is better) Translates to: KEWLTIIPPGDLMIL*AYAGIRHIHSAHTY Trigger: ATATGTATGTGCACTATGTATGTGCCTGATGCCTGCATAGGCCAAAAGAATCATTAGATCCCCTGGAGGGATGATTGTGAGCCATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTTTGAAGGAAGGAGCTaGGGTAAAGACAGCACAACT | + |
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Preference number: 2 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWFEGRS*GKDSTT Trigger: AGTTGTGCTGTCTTTACCTCAGCTCCTTCCTTCAAA...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACATACAGTTCTGACTTGTCATCAAACTCAAGTAGATTAGTAACTGAACTGCTAGAGTTGGGAGCTTaGAAAGGGAGACTTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: ATYSSDLSSNSSRLVTELLELGA*KGRLGT Trigger: GGTCCCAAGTCTCCCTTTTCAAGCTCCCAACTCTAG...CAGTTCAGTTACTAATCTACTTGAGTTTGATGACAAGTCAGAACTGTATGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGATGATAAGGACATAGAATTCCTTCAAGTTAATGATACACTTCAGTCCGCAGGAAATAGAAGGTaGGACATCCAGCAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PQDDKDIEFLQVNDTLQSAGNRR*DIQQRK Trigger: CTTTCTCTGCTGGATGTCCCACCTTCTATTTCCTGC...GGACTGAAGTGTATCATTAACTTGAAGGAATTCTATGTCCTTATCATCCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CAA 90 bp | GCTGTCAAAAATAACCATCACATGGAGCCCAAGGGGCTCTGCCTTTaGGATTATATATCTGAGATGGTGCTGGTATCTATATATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: AVKNNHHMEPKGLCL*DYISEMVLVSIYCV Trigger: AACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCCATGTGATGGTTATTTTTGACAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATGTCCAAAGCATATTTTaGCACATTGGTCTGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: DSLLISYTSHVYSFKSTDVQSIF*HIGLPC Trigger: GCATGGCAGACCAATGTGCCAAAATATGCTTTGGAC...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATCATAGACTAGCCCTTTaGAATAGTTACAGTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: DSLLISYTSHVYSFKSTDHRLAL*NSYSLL Trigger: CAAAAGACTGTAACTATTTCAAAGGGCTAGTCTATG...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CCA 90 bp | GCAACATACAGTTCTGACTTGTCATCAAACTCAAGTAGATTAGTAACTGAACTGAGAAAGAAAGAATTCTaGGAAAGATACAAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ATYSSDLSSNSSRLVTELRKKEF*ERYKSS Trigger: ACTGCTCTTGTATCTTTCCCAGAATTCTTTCTTTCT...CAGTTCAGTTACTAATCTACTTGAGTTTGATGACAAGTCAGAACTGTATGTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | GGGAAGGGAGAGCATGGCAAAGCTGTGCGGTTTACATaGCAGCCAGAGAGCAAAAGTATGGTCATGCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GKGEHGKAVRFT*QPESKSMVMPA Trigger: AGCTGGCATGACCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTCCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | TCCATTATAGTGGGGTGGGATAGGGAAGGGAGAGCATaGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SIIVGWDREGRA*QSCAVYMTARE Trigger: CTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTCCCTTCCCTATCCCACCCCACTATAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTACATCGATGCTAACCGATGCTGGGAAAGATGGAGGAGACAGATGCTTACACGCCTGTGTTCTGTaGCTGCTGCTTTCACAGTCG | + |
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Preference number: 3 (lower is better) Translates to: PGTSMLTDAGKDGGDRCLHACVL*LLLSQS Trigger: CGACTGTGAAAGCAGCAGCAACAGAACACAGGCGTG...TAAGCATCTGTCTCCTCCATCTTTCCCAGCATCGGTTAGCATCGATGTACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | CACGCCTGTGTTCTGTTGCTGCTGCTTTCACAGTCGTaGGTAACAACTGGGAGAGTAAGCTGCAATCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: HACVLLLLLSQS*VTTGRVSCNLL Trigger: GAGCAGATTGCAGCTTACTCTCCCAGTTGTTACTCACGACTGTGAAAGCAGCAGCAACAGAACACAGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR GCA 72 bp | GCATTTCCTAATGCTGCTGCTTCTCCATGGCAGAAGTaGACGCCTGTGTTCTGTTGCTGCTGCTTTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: AFPNAAASPWQK*TPVFCCCCFHS Trigger: ACTGTGAAAGCAGCAGCAACAGAACACAGGCGTGCACTTCTGCCATGGAGAAGCAGCAGCATTAGGAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | AGCAATTCTCATACTGCCACCGACCATTTGCTTCCTTaGGCTGTCACTGTAGGTAGCCTGCTGTCAACACTG | + |
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Preference number: 3 (lower is better) Translates to: SNSHTATDHLLP*AVTVGSLLSTL Trigger: CAGTGTTGACAGCAGGCTACCTACAGTGACAGCTCAAGGAAGCAAATGGTCGGTGGCAGTATGAGAATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | CCTTATAAACAAGGAGAGAGATTATCTGAGCCACACTaGAAGGCTCCAAAAGCAGCCCAGCTGTGGCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: PYKQGERLSEPH*KAPKAAQLWPD Trigger: GTCAGGCCACAGCTGGGCTGCTTTTGGAGCCTTTCAGTGTGGCTCAGATAATCTCTCTCCTTGTTTATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | ATCCAACTAGATGAACTGTCTCTAGAGTTGGGAGCTTaGAAAGGGAGACTTGGGACCCCAGGGAAGATGAGT | + |
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Preference number: 3 (lower is better) Translates to: IQLDELSLELGA*KGRLGTPGKMS Trigger: ACTCATCTTCCCTGGGGTCCCAAGTCTCCCTTTTCAAGCTCCCAACTCTAGAGACAGTTCATCTAGTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | CTGGATACTAGGCCTGTCAAACCTGAAAGACCAGTGTaGACAATGTTGCTCCTCTGTTCTCCACTCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: LDTRPVKPERPV*TMLLLCSPLLQ Trigger: TTGTAGGAGTGGAGAACAGAGGAGCAACATTGTCCACACTGGTCTTTCAGGTTTGACAGGCCTAGTATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | TCTGTTGCTGCTGCTTTCACAGTCGTGAGTAACAACTaGGAGAGTAAGCTGCAATCTGCTCAAAGTACCAGG | + |
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Preference number: 3 (lower is better) Translates to: SVAAAFTVVSNN*ESKLQSAQSTR Trigger: CCTGGTACTTTGAGCAGATTGCAGCTTACTCTCCCAGTTGTTACTCACGACTGTGAAAGCAGCAGCAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | ACAGTTGCCCCTCTGCTGTTGAGCTCAGCTTTCTCCTaGTTTTGCAGCAGTGTACACCAAACGCAAATCTTA | + |
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Preference number: 3 (lower is better) Translates to: TVAPLLLSSAFS*FCSSVHQTQIL Trigger: TAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAACAGCAGAGGGGCAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | AACCTGGGCTACATTGTGAGTGTCCATCCAACTAGATaGACTGTCTCTAGAGTTGGGAGCTTGAAAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: NLGYIVSVHPTR*TVSRVGSLKRE Trigger: CTCCCTTTTCAAGCTCCCAACTCTAGAGACAGTTCATCTAGTTGGATGGACACTCACAATGTAGCCCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | TCTGGGAAAGATACAAGAGCAGTAAGATCGGCCACCTaGACTAAGAGCAATCGGGCATATGAAACTAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SGKDTRAVRSAT*TKSNRAYETKE Trigger: CTCCTTAGTTTCATATGCCCGATTGCTCTTAGTCCAGGTGGCCGATCTTACTGCTCTTGTATCTTTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGGACAATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCAGGGAAGATGAGTTaGAGAACTGACATGGACACA | + |
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Preference number: 3 (lower is better) Translates to: SVDNVAPLFSTPTSHLFLPGKMS*RTDMDT Trigger: TGTGTCCATGTCAGTTCTCAAACTCATCTTCCCTGG...TAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACATTGTCCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | ACCATTTTAGCTTCCTCATCCCTGGGACAGCACACCTaGCATAAACAACTTAAGGGAAGGAAAGCTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: TILASSSLGQHT*HKQLKGRKAQF Trigger: AAACTGAGCTTTCCTTCCCTTAAGTTGTTTATGTCAGGTGTGCTGTCCCAGGGATGAGGAAGCTAAAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR GCA 72 bp | AGTGTACACCAAACGCAAATCTTAACAGACTCTGGATaGAAATCCTATCCAGAAGTGAGCCAGTACCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: SVHQTQILTDSG*KSYPEVSQYQV Trigger: TACCTGGTACTGGCTCACTTCTGGATAGGATTTGCATCCAGAGTCTGTTAAGATTTGCGTTTGGTGTACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR TCA 72 bp | GGAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTaGGATGGTGCTGGTATCTATATATTGTGTTGCATA | + |
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Preference number: 3 (lower is better) Translates to: GAQGALPFGLYI*DGAGIYILCCI Trigger: TATGCAACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR GCA 72 bp | AGCAAGATATTGGTAAACTGGGAACTGTACACACAGTaGTTTAGCACTTCCGAGGATGTGACAAGTTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: SKILVNWELYTQ*FSTSEDVTSCR Trigger: TCTACAACTTGTCACATCCTCGGAAGTGCTAAAGCACTGTGTGTACAGTTCCCAGTTTACCAATATCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | CATACAGCCAAACAGAGATTAACAGACAACATGAGTTaGACTGTGGAATCTCCCCCTTTTAACTACCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: HTAKQRLTDNMS*TVESPPFNYLY Trigger: GTACAGGTAGTTAAAAGGGGGAGATTCCACAGTCCAACTCATGTTGTCTGTTAATCTCTGTTTGGCTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| 3UTR CCA 72 bp | ATAACCATCACATGGAGCCCAAGGGGCTCTGCCTTTTaGATTATATATCTGAGATGGTGCTGGTATCTATAT | + |
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Preference number: 3 (lower is better) Translates to: ITITWSPRGSAF*IIYLRWCWYLY Trigger: ATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCCATGTGATGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | CTCAGCTTAAAATCAACCTCAGTCCAAAGCATATTTTaGCACATTGGTCTGCCATGCATTGGTATGCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLKSTSVQSIF*HIGLPCIGMLP Trigger: AGGTAGCATACCAATGCATGGCAGACCAATGTGCCAAAATATGCTTTGGACTGAGGTTGATTTTAAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATAACAGACAACATGAGTaGGACTGTGGAATCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DSLLISYTSHVYSFKSTDNRQHE*DCGISP Trigger: GGGGGAGATTCCACAGTCCAACTCATGTTGTCTGTT...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | TTATATACAGTGTCAGTGGTTTTCCTGAATGCTCAGTaGAAGAAGCCAGACACAACGTTAGGAAACACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LYTVSVVFLNAQ*KKPDTTLGNTN Trigger: GTTAGTGTTTCCTAACGTTGTGTCTGGCTTCTTCCACTGAGCATTCAGGAAAACCACTGACACTGTATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAACATACAGTTCTGACTTGTCATCAAACTCAAGTAGATTAGTAACTGAACTGCAAGGGGAAATAAGTTaGAAGGAAGGAGCTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ATYSSDLSSNSSRLVTELQGEIS*KEGAEV Trigger: TACCTCAGCTCCTTCCTTCAAACTTATTTCCCCTTG...CAGTTCAGTTACTAATCTACTTGAGTTTGATGACAAGTCAGAACTGTATGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR TCA 72 bp | TGTAACTACAGTTCTAGAGTATCCAACATCATCTTCTaGCATTTACTGACACAAGGCACACATGTAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: CNYSSRVSNIIF*HLLTQGTHVAH Trigger: GTGTGCTACATGTGTGCCTTGTGTCAGTAAATGTCAGAAGATGATGTTGGATACTCTAGAACTGTAGTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | CCTACAAGTCATCTGTTCTTACCTGGTCCAAGAATTTaGATTGATCTTGGGAGGAAAATCTGTAGATCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PTSHLFLPGPRI*IDLGRKICRSN Trigger: GTTAGATCTACAGATTTTCCTCCCAAGATCAATCCAAATTCTTGGACCAGGTAAGAACAGATGACTTGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | CCAAAGCATATTTTGGCACATTGGTCTGCCATGCATTaGTATGCTACCTCATATAACCTTATAAACAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PKHILAHWSAMH*YATSYNLINKE Trigger: CTCCTTGTTTATAAGGTTATATGAGGTAGCATACCAATGCATGGCAGACCAATGTGCCAAAATATGCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | AAAATCAACCTCAGTCCAAAGCATATTTTGGCACATTaGTCTGCCATGCATTGGTATGCTACCTCATATAAC | + |
|
Preference number: 3 (lower is better) Translates to: KINLSPKHILAH*SAMHWYATSYN Trigger: GTTATATGAGGTAGCATACCAATGCATGGCAGACCAATGTGCCAAAATATGCTTTGGACTGAGGTTGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGGATGATAAGGACATAGAATTCCTTCAAGTTAATGATACACTTCAGTCCGAATTTGGATTGATCTaGGGAGGAAAATCTGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQDDKDIEFLQVNDTLQSEFGLI*GGKSVD Trigger: ATCTACAGATTTTCCTCCCAAGATCAATCCAAATTC...GGACTGAAGTGTATCATTAACTTGAAGGAATTCTATGTCCTTATCATCCTGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | AAACTAAAAATTCTTTCAGGGTTTACATCTAGGGCCTaGTATAATGATGCATGCCTGGAACCCAATGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLKILSGFTSRA*YNDACLEPNVR Trigger: TCTTACATTGGGTTCCAGGCATGCATCATTATACCAGGCCCTAGATGTAAACCCTGAAAGAATTTTTAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | CCAAGGGGCTCTGCCTTTTGGATTATATATCTGAGATaGTGCTGGTATCTATATATTGTGTTGCATAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRGSAFWIIYLR*CWYLYIVLHKF Trigger: AAACTTATGCAACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR GCA 72 bp | AGGGGCTCTGCCTTTTGGATTATATATCTGAGATGGTaGTGGTATCTATATATTGTGTTGCATAAGTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RGSAFWIIYLRW*WYLYIVLHKFV Trigger: TACAAACTTATGCAACACAATATATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR TCA 72 bp | AGTCATTATAGATTGGCAGTTTCAATGTGGTATGTATaGGGGAGGGAAAAATGTTCCCTCTATCTGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHYRLAVSMWYV*GREKCSLYLYK Trigger: TTTATACAGATAGAGGGAACATTTTTCCCTCCCTCATACATACCACATTGAAACTGCCAATCTATAATGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CCA 72 bp | ACAAAACATCTGGATGCTATATTGTCTTTAACAACATaGAATAAAGCAATTCTCATACTGCCACCGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: TKHLDAILSLTT*NKAILILPPTI Trigger: AATGGTCGGTGGCAGTATGAGAATTGCTTTATTCCATGTTGTTAAAGACAATATAGCATCCAGATGTTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATGGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAGCAAAAGTATGGAAGAGGCGGTTTGTGTaGGTGAAGAACACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESMAKLCGLHDSQRAKVWKRRFV*VKNTGH Trigger: GTGCCCTGTGTTCTTCACTCACACAAACCGCCTCTT...CCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | TGCCCCTCTGCTGTTGAGCTCAGCTTTCTCCTGGTTTaGCAGCAGTGTACACCAAACGCAAATCTTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPSAVELSFLLV*QQCTPNANLNR Trigger: TCTGTTAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAACAGCAGAGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTACATCGATGCTAACCGATGCTGGGAAAGATGGAGGAGACAGATGCTTACTGACAATCAACTTCTaGTCTGGAACTGGGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PGTSMLTDAGKDGGDRCLLTINF*SGTGGI Trigger: AATACCCCCAGTTCCAGATCAGAAGTTGATTGTCAG...TAAGCATCTGTCTCCTCCATCTTTCCCAGCATCGGTTAGCATCGATGTACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAAGGCGGTTTGTGTGAGTaGAGAACACAGGGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKGGLCE*RTQGTL Trigger: CAGTGTGCCCTGTGTTCTTCACTCACACAAACCGCC...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCATGGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAGCAAAAGTATGGAAACACAGATGTTTCTaGCTGTTGGTCACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESMAKLCGLHDSQRAKVWKHRCF*LLVTQV Trigger: TACTTGGGTGACCAACAGGCAGAAACATCTGTGTTT...CCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAATACCCAGTACCACTCTaGAACAACTTCCACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: MLLLCSPLLQVICSYLVQYPVPL*NNFHRP Trigger: TGGTCTGTGGAAGTTGTTGCAGAGTGGTACTGGGTA...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | GACACAACGTTAGGAAACACTAACGTAAGAAAACAAACCACTGTTCGCCAGAGACAAGCACTGGCCACCTaGCTTGATGTAGTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTTLGNTNVRKQTTVRQRQALAT*LDVVSQ Trigger: CTGAGAGACTACATCAAGCCAGGTGGCCAGTGCTTG...TCTCTGGCGAACAGTGGTTTGTTTTCTTACGTTAGTGTTTCCTAACGTTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAGAATAAGGCTTTTTGTGTaGAGAATCCAACGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VAPLFSTPTSHLFLPGPRIRLFV*RIQREH Trigger: GTGTTCCCGTTGGATTCTCCACACAAAAAGCCTTAT...TCTTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCAAGCACTGGCCACCTaGCTTGATGTAGTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKQALAT*LDVVSQ Trigger: CTGAGAGACTACATCAAGCCAGGTGGCCAGTGCTTG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTACATCGATGCTAACCGATGCTGGGAAAGATGGAGGAGACAGATGCTTAAAAGAAAACCACTTCTaGGACCTTCTTGGATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: PGTSMLTDAGKDGGDRCLKENHF*DLLGLT Trigger: AGTTAATCCAAGAAGGTCTCAGAAGTGGTTTTCTTT...TAAGCATCTGTCTCCTCCATCTTTCCCAGCATCGGTTAGCATCGATGTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACAAGAGGCGGTTTGTGTaGGTGAAGAACACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDKRRFV*VKNTGH Trigger: GTGCCCTGTGTTCTTCACTCACACAAACCGCCTCTT...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCAAGGGGCTCTGCCTTTTGGATTATATATCTGAGATGGTGCTGGTATCTCAGTTAAGAAGTGGCTaGATACAAGAAATGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EPKGLCLLDYISEMVLVSQLRSG*IQEMSD Trigger: GTCTGACATTTCTTGTATGCAGCCACTTCTTAACTG...AGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACCCAGTACCACTCTaGAACAACTTCCACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWYPVPL*NNFHRP Trigger: TGGTCTGTGGAAGTTGTTGCAGAGTGGTACTGGGTA...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | CCTCAGCTTAAAATCAACCTCAGTCCAAAGCATATTTaGGCACATTGGTCTGCCATGCATTGGTATGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PQLKINLSPKHI*AHWSAMHWYAT Trigger: GGTAGCATACCAATGCATGGCAGACCAATGTGCCAAAATATGCTTTGGACTGAGGTTGATTTTAAGCTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAGAATCAACTGTAGCGTTTaGAGCTCCATTTCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAPLFSTPTSHLFLPGPRINCSV*SSISFK Trigger: CTTAAATGAAATGGAGCTTCAAACGCTACAGTTGAT...TCTTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAGATGGAGTTGTTTTCAATaGTCTGTGAGGATAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPLFSTPTSHLFLPGPRWSCFQ*SVRINP Trigger: TGGATTTATCCTCACAGATCATTGAAAACAACTCCA...TCTTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAAACTCTCCTGAATTTGTaGTTTTTACCCAGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: MLLLCSPLLQVICSYLVQTLLNL*FLPSTT Trigger: AGTGGTACTGGGTAAAAATCACAAATTCAGGAGAGT...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGCTGACAATCAACTTCTaGTCTGGAACTGGGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGLTINF*SGTGGI Trigger: AATACCCCCAGTTCCAGATCAGAAGTTGATTGTCAG...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ATATTGTCTTTAACAACATGGAATAAAGCAATTCTCATACTGCCACCGACCATTGGCGGTTTGTGTGAGTaGAGAACACAGGGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILSLTTWNKAILILPPTIGGLCE*RTQGTL Trigger: CAGTGTGCCCTGTGTTCTTCACTCACACAAACCGCC...AATGGTCGGTGGCAGTATGAGAATTGCTTTATTCCATGTTGTTAAAGACAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGAAAGCTGCTTTGTGGTaGCAGCAGGTATTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWKAALW*QQVFLS Trigger: GGACAAAAATACCTGCTGCCACCACAAAGCAGCTTT...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAAGCTGCTTTGTGGTaGCAGCAGGTATTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGKAALW*QQVFLS Trigger: GGACAAAAATACCTGCTGCCACCACAAAGCAGCTTT...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | AATAACCATCACATGGAGCCCAAGGGGCTCTGCCTTTaGGATTATATATCTGAGATGGTGCTGGTATCTATA | + |
|
Preference number: 4 (lower is better) Translates to: NNHHMEPKGLCL*DYISEMVLVSI Trigger: TATAGATACCAGCACCATCTCAGATATATAATCCAAAAGGCAGAGCCCCTTGGGCTCCATGTGATGGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCCAAAATCAGCTCTCTaGTCTTCCCAACAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKPKSAL*SSQQKQ Trigger: CTGTTTCTGTTGGGAAGATCAGAGAGCTGATTTTGG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171284.3 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCATCAAGTGGTAAAGTaGTGCATCCGCTACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKHQVVK*CIRYFH Trigger: ATGGAAGTAGCGGATGCATCACTTTACCACTTGATG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCGGACTCCAGAGCAATaGAATAATCCATGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKRTPEQ*NNPCAE Trigger: TTCAGCACATGGATTATTTCATTGCTCTGGAGTCCG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAATTGTATGATACTCCATaGCATCCAATTCACCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLLCSPLLQVICSYLVQLYDTP*HPIHLD Trigger: ATCAAGGTGAATTGGATGCCATGGAGTATCATACAA...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTTAATGAAAGAAAGATaGTCCAGTAACCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWLMKER*SSNHPG Trigger: TCCTGGGTGGTTACTGGATCATCTTTCTTTCATTAA...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGGCATCCAATTCACCTTaGTTGAAAGCAATGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGASNSP*LKAMHL Trigger: AAGATGCATTGCTTTCAATCAAGGTGAATTGGATGC...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAAAAGAAAGCTGCTTTGTaGTGGCAGCAGGTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKKKAAL*WQQVFL Trigger: CAAAAATACCTGCTGCCACCACAAAGCAGCTTTCTT...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGATAAGGCTTTTTGTGTaGAGAATCCAACGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKIRLFV*RIQREH Trigger: GTGTTCCCGTTGGATTCTCCACACAAAAAGCCTTAT...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATCATCAAGTGGTAAAGTaGTGCATCCGCTACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSLLISYTSHVYSFKSTDHQVVK*CIRYFH Trigger: ATGGAAGTAGCGGATGCATCACTTTACCACTTGATG...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGATCAACTGTAGCGTTTaGAGCTCCATTTCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGINCSV*SSISFK Trigger: CTTAAATGAAATGGAGCTTCAAACGCTACAGTTGAT...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAAACTCTCCTGAATTTGTaGTTTTTACCCAGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKTLLNL*FLPSTT Trigger: AGTGGTACTGGGTAAAAATCACAAATTCAGGAGAGT...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GCAACATACAGTTCTGACTTGTCATCAAACTCAAGTAGATTAGTAACTGAACTGCGGACTCCAGAGCAATaGAATAATCCATGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATYSSDLSSNSSRLVTELRTPEQ*NNPCAE Trigger: TTCAGCACATGGATTATTTCATTGCTCTGGAGTCCG...CAGTTCAGTTACTAATCTACTTGAGTTTGATGACAAGTCAGAACTGTATGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAACAGTTAAGAAGTGGCTaGATACAAGAAATGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKQLRSG*IQEMSD Trigger: GTCTGACATTTCTTGTATGCAGCCACTTCTTAACTG...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACGGCATTCGCTTTATCTaGTGTGGTGATAAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDGIRFI*CGDKLL Trigger: CAGTAGTTTATCACCACAGCAGATAAAGCGAATGCC...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACAAACACAGATGTTTCTaGCTGTTGGTCACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDKHRCF*LLVTQV Trigger: TACTTGGGTGACCAACAGGCAGAAACATCTGTGTTT...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAACTTCTGAGACCTTCTTaGATTAACTTCGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKLLRPS*INFEDP Trigger: TGGATCTTCGAAGTTAATCCAAGAAGGTCTCAGAAG...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | GGTTGGCTGTGTGATTCAGCAACATACAGTTCTGACTaGTCATCAAACTCAAGTAGATTAGTAACTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GWLCDSATYSSD*SSNSSRLVTEL Trigger: CAGTTCAGTTACTAATCTACTTGAGTTTGATGACAAGTCAGAACTGTATGTTGCTGAATCACACAGCCAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGAAAGAAAACCACTTCTaGGACCTTCTTGGATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKKENHF*DLLGLT Trigger: AGTTAATCCAAGAAGGTCTCAGAAGTGGTTTTCTTT...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGTGGAGTTGTTTTCAATaGTCTGTGAGGATAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKWSCFQ*SVRINP Trigger: TGGATTTATCCTCACAGATCATTGAAAACAACTCCA...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGAACACAAACTCTCCTaGATTTGTGATTTTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKEHKLS*ICDFYP Trigger: TGGGTAAAAATCACAAATTCAGGAGAGTTTGTGTTC...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCCAATTCACCTTGATTaGAAGCAATGCATCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKPIHLD*KQCIFY Trigger: GTAAAAGATGCATTGCTTTCAATCAAGGTGAATTGG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACCTTCTGAGACCTTCTTaGATTAACTTCGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDLLRPS*INFEDP Trigger: TGGATCTTCGAAGTTAATCCAAGAAGGTCTCAGAAG...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | ATCTGTTCTTACCTGGTCCAAGAATTTGGATTGATCTaGGGAGGAAAATCTGTAGATCTAACTCAAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICSYLVQEFGLI*GGKSVDLTQVH Trigger: GTGAACTTGAGTTAGATCTACAGATTTTCCTCCCAAGATCAATCCAAATTCTTGGACCAGGTAAGAACAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATTTAATGAAAGAAAGATaGTCCAGTAACCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSLLISYTSHVYSFKSTDLMKER*SSNHPG Trigger: TCCTGGGTGGTTACTGGATCATCTTTCTTTCATTAA...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACGAACACAAACTCTCCTaGATTTGTGATTTTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDEHKLS*ICDFYP Trigger: TGGGTAAAAATCACAAATTCAGGAGAGTTTGTGTTC...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGATAACTCTGATAAATTaGAGGCATCAAGTGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKITLIN*RHQVVK Trigger: CTTTACCACTTGATGCCTGCAATTTATCAGAGTTAT...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| 3UTR CAA 72 bp | GTTTCTCTAGTAAAGATGATTTTTAGGCCAGGTTTATaGGGTAAAAGTACGAGCCTTAATTACATAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLVKMIFRPGL*GKSTSLNYIAS Trigger: ACTTGCTATGTAATTAAGGCTCGTACTTTTACCCAATAAACCTGGCCTAAAAATCATCTTTACTAGAGAAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR GCA 90 bp | ATATTGTCTTTAACAACATGGAATAAAGCAATTCTCATACTGCCACCGACCATTATAACTCTGATAAATTaGAGGCATCAAGTGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSLTTWNKAILILPPTIITLIN*RHQVVK Trigger: CTTTACCACTTGATGCCTGCAATTTATCAGAGTTAT...AATGGTCGGTGGCAGTATGAGAATTGCTTTATTCCATGTTGTTAAAGACAATAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTACATCGATGCTAACCGATGCTGGGAAAGATGGAGGAGACAGATGCTTAAACTTGAGGACTTCGTaGCCCCAACTCATCCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGTSMLTDAGKDGGDRCLNLRTS*PQLIQP Trigger: AGGTTGGATGAGTTGGGGCAACGAAGTCCTCAAGTT...TAAGCATCTGTCTCCTCCATCTTTCCCAGCATCGGTTAGCATCGATGTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGCATGGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAGCAAAAGTATGGCAAAAGAAAGCTGCTTaGTGGTGGCAGCAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: ESMAKLCGLHDSQRAKVWQKKAA*WWQQVF Trigger: AAATACCTGCTGCCACCACAAAGCAGCTTTCTTTTG...CCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGCATGGCAAAGCTGTGCGGTTTACATGACAGCCAGAGAGCAAAAGTATGGAGGAAGGCAAATGTTTaGCCATCTCACATAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESMAKLCGLHDSQRAKVWRKANV*PSHITL Trigger: CAGAGTTATGTGAGATGGCAAAACATTTGCCTTCCT...CCATACTTTTGCTCTCTGGCTGTCATGTAAACCGCACAGCTTTGCCATGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGAACTTGAGGACTTCGTaGCCCCAACTCATCCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKNLRTS*PQLIQP Trigger: AGGTTGGATGAGTTGGGGCAACGAAGTCCTCAAGTT...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGCAAAAGAAAGCTGCTTaGTGGTGGCAGCAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWQKKAA*WWQQVF Trigger: AAATACCTGCTGCCACCACAAAGCAGCTTTCTTTTG...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGAGATGTTTCTGCCTGTaGGTCACCCAAGTAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLGTLNGVKVHMSKHTDWRCFCL*VTQVTM Trigger: CATTGTTACTTGGGTGACCAACAGGCAGAAACATCT...CCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAGATGTTTCTGCCTGTaGGTCACCCAAGTAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGRCFCL*VTQVTM Trigger: CATTGTTACTTGGGTGACCAACAGGCAGAAACATCT...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGGTTTTTGTTACTTTGTaGGCGCTCTTTGTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGVFVTL*ALFVNS Trigger: GCTGTTCACAAAGAGCGCCAACAAAGTAACAAAAAC...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGCTCAGCTTTCTCCTGGTTTTGCAGCAGTGTACACCAAACGCAAATCTTATTCGTTTTTGTTACTTaGTTGGCGCTCTTTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSAFSWFCSSVHQTQILFVFVT*LALFVN Trigger: GTTCACAAAGAGCGCCAACAAAGTAACAAAAACGAA...TAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTGCTCCTCTGTTCTCCACTCCTACAAGTCATCTGTTCTTACCTGGTCCAACATAACTCTGATAAATaGCAGGCATCAAGTGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLLLCSPLLQVICSYLVQHNSDK*QASSGK Trigger: TTTACCACTTGATGCCTGCAATTTATCAGAGTTATG...TTGGACCAGGTAAGAACAGATGACTTGTAGGAGTGGAGAACAGAGGAGCAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGCTCAGCTTTCTCCTGGTTTTGCAGCAGTGTACACCAAACGCAAATCTTAGTGGATCAATCACAATaGCATCAAATGTCTTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSAFSWFCSSVHQTQILVDQSQ*HQMSYH Trigger: GTGGTAAGACATTTGATGCAATTGTGATTGATCCAC...TAAGATTTGCGTTTGGTGTACACTGCTGCAAAACCAGGAGAAAGCTGAGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS TCA 90 bp | GACCTTCTTGGATTAACTTCGAAGATCCATCCAAAATCAGCTCTCTaGTCTTCCCAACAGAAACAGAGACCTCTTGTTTATAGTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLGLTSKIHPKSAL*SSQQKQRPLVYSQS Trigger: TGACTGACTATAAACAAGAGGTCTCTGTTTCTGTTGGGAAGATCAGAGAGCTGATTTTGGATGGATCTTCGAAGTTAATCCAAGAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171284.3 |
||
| CDS TCA 90 bp | CCATCTCACATAACTCTGATAAATTGCAGGCATCAAGTGGTAAAGTaGTGCATCCGCTACTTCCATCCTGTTTTTCAACAAGTGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSHITLINCRHQVVK*CIRYFHPVFQQVGK Trigger: TTTACCCACTTGTTGAAAAACAGGATGGAAGTAGCGGATGCATCACTTTACCACTTGATGCCTGCAATTTATCAGAGTTATGTGAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAAAGGAAGGCAAATGTTTaGCCATCTCACATAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKRKANV*PSHITL Trigger: CAGAGTTATGTGAGATGGCAAAACATTTGCCTTCCT...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGCTTCTTTTAACCGATTaGTTCTCCCATGGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKLLLTD*FSHGGS Trigger: TGATCCACCATGGGAGAACAAATCGGTTAAAAGAAG...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGATGATAAGGACATAGAATTCCTTCAAGTTAATGATACACTTCAGTCCGGCATCCAATTCACCTaGATTGAAAGCAATGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PQDDKDIEFLQVNDTLQSGIQFT*IESNAS Trigger: AGATGCATTGCTTTCAATCAAGGTGAATTGGATGCC...GGACTGAAGTGTATCATTAACTTGAAGGAATTCTATGTCCTTATCATCCTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGTTCGTTTTTGTTACTTaGTTGGCGCTCTTTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKFVFVT*LALFVN Trigger: GTTCACAAAGAGCGCCAACAAAGTAACAAAAACGAA...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGCATAACTCTGATAAATaGCAGGCATCAAGTGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLNGVKVHMSKHTDWYKGHNSDK*QASSGK Trigger: TTTACCACTTGATGCCTGCAATTTATCAGAGTTATG...CCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | CTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGGGAAATTGGAAAAGCTGGAGTaGTTTTCAATGATCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNGVKVHMSKHTDWYKGKLEKLE*FSMICE Trigger: CTCACAGATCATTGAAAACAACTCCAGCTTTTCCAA...TTTCCCCTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTGGTACAAGGTGGATCAATCACAATaGCATCAAATGTCTTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTLNGVKVHMSKHTDWYKVDQSQ*HQMSYH Trigger: GTGGTAAGACATTTGATGCAATTGTGATTGATCCAC...CTTGTACCAGTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS CCA 90 bp | TGGATCAATCACAATTGCATCAAATGTCTTACCACAGTTAAGAAGTaGCTGCATACAAGAAATGTCAGACAAAAGAAAGCTGCTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WINHNCIKCLTTVKK*LHTRNVRQKKAALW Trigger: CCACAAAGCAGCTTTCTTTTGTCTGACATTTCTTGTATGCAGCCACTTCTTAACTGTGGTAAGACATTTGATGCAATTGTGATTGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTCTGCTAATTTCTTACACAAGTCATGTCTATTCATTTAAGTCCACGGATGTTTTTGTTACTTTGTaGGCGCTCTTTGTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLLISYTSHVYSFKSTDVFVTL*ALFVNS Trigger: GCTGTTCACAAAGAGCGCCAACAAAGTAACAAAAAC...ATCCGTGGACTTAAATGAATAGACATGACTTGTGTAAGAAATTAGCAGACTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACTTGGAAAAGCTGGAGTaGTTTTCAATGATCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDLEKLE*FSMICE Trigger: CTCACAGATCATTGAAAACAACTCCAGCTTTTCCAA...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS CCA 90 bp | ACTACTGTACCTGTTACTTCTTTTAACCGATTTGTTCTCCCATGGTaGATCAATCACAATTGCATCAAATGTCTTACCACAGTTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTVPVTSFNRFVLPW*INHNCIKCLTTVKK Trigger: CTTCTTAACTGTGGTAAGACATTTGATGCAATTGTGATTGATCCACCATGGGAGAACAAATCGGTTAAAAGAAGTAACAGGTACAGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCTGGGTACACTGAATGGTGTAAAAGTTCATATGTCTAAGCACACTGACACTAGATTTTCGTTTTaGTTACTTTGTTGGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLGTLNGVKVHMSKHTDTRFSF*LLCWRS Trigger: AGAGCGCCAACAAAGTAACAAAAACGAAAATCTAGT...GTCAGTGTGCTTAGACATATGAACTTTTACACCATTCAGTGTACCCAGAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS TCA 72 bp | GTAGTCTCTCAGAACTTCGGTAAGAGGCGGTTTGTGTaGGTGAAGAACACAGGGCACACTGACAATCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: VVSQNFGKRRFV*VKNTGHTDNQL Trigger: AAGTTGATTGTCAGTGTGCCCTGTGTTCTTCACTCACACAAACCGCCTCTTACCGAAGTTCTGAGAGACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
||
| CDS CAA 72 bp | TTTTCGGTGATCACTTCACAACTTCCTTCATCGTCATaGCCCGACACAGTAGTGAAGTCAGGAGCAAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSVITSQLPSSS*PDTVVKSGAKH Trigger: GTGCTTTGCTCCTGACTTCACTACTGTGTCGGGCAATGACGATGAAGGAAGTTGTGAAGTGATCACCGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS CAA 90 bp | AAAACATATTTTTCGGTGATCACTTCACAACTTCCTTCATCGTCATaGCCCGACACAGTAGTGAAGTCAGGAGCAAAGCACATAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: KTYFSVITSQLPSSS*PDTVVKSGAKHIAG Trigger: TCCTGCTATGTGCTTTGCTCCTGACTTCACTACTGTGTCGGGCAATGACGATGAAGGAAGTTGTGAAGTGATCACCGAAAAATATGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS GCA 72 bp | GGATATAGTTCCTCCTTCACAAAACACAGATGTTTCTaGCTGTTGGTCACCCAAGTAACAATGAGACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GYSSSFTKHRCF*LLVTQVTMRQS Trigger: TGACTGTCTCATTGTTACTTGGGTGACCAACAGGCAGAAACATCTGTGTTTTGTGAAGGAGGAACTATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS GCA 72 bp | AACCGATTTGTTCTCCCATGGTGGATCAATCACAATTaGATCAAATGTCTTACCACAGTTAAGAAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NRFVLPWWINHN*IKCLTTVKKWL Trigger: CAGCCACTTCTTAACTGTGGTAAGACATTTGATGCAATTGTGATTGATCCACCATGGGAGAACAAATCGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS CAA 72 bp | GGCAAATGTTTTGCCATCTCACATAACTCTGATAAATaGCAGGCATCAAGTGGTAAAGTGATGCATCCGCTA | + |
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Preference number: 6 (lower is better) Translates to: GKCFAISHNSDK*QASSGKVMHPL Trigger: TAGCGGATGCATCACTTTACCACTTGATGCCTGCAATTTATCAGAGTTATGTGAGATGGCAAAACATTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS CAA 90 bp | CAGCTCTCTGATCTTTGTATGATACTCCATGGCATCCAATTCACCTaGATTGAAAGCAATGCATCTTTTACGCTTCTTCCCAACAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: QLSDLCMILHGIQFT*IESNASFTLLPNRN Trigger: GTTTCTGTTGGGAAGAAGCGTAAAAGATGCATTGCTTTCAATCAAGGTGAATTGGATGCCATGGAGTATCATACAAAGATCAGAGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| CDS TCA 72 bp | CCTGTTTTTCAACAAGTGGGTAAAGAAAACCACTTCTaGGACCTTCTTGGATTAACTTCGAAGATCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: PVFQQVGKENHF*DLLGLTSKIHP Trigger: TGGATGGATCTTCGAAGTTAATCCAAGAAGGTCTCAGAAGTGGTTTTCTTTACCCACTTGTTGAAAAACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS TCA 72 bp | TTGTATGATACTCCATGGCATCCAATTCACCTTGATTaGAAGCAATGCATCTTTTACGCTTCTTCCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: LYDTPWHPIHLD*KQCIFYASSQQ Trigger: CTGTTGGGAAGAAGCGTAAAAGATGCATTGCTTTCAATCAAGGTGAATTGGATGCCATGGAGTATCATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| CDS CAA 72 bp | GATCTTTGTATGATACTCCATGGCATCCAATTCACCTaGATTGAAAGCAATGCATCTTTTACGCTTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: DLCMILHGIQFT*IESNASFTLLP Trigger: GGGAAGAAGCGTAAAAGATGCATTGCTTTCAATCAAGGTGAATTGGATGCCATGGAGTATCATACAAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234990.2 |
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| CDS CAA 90 bp | TGCTGTGGTGATAAACTACTGTACCTGTTACTTCTTTTAACCGATTaGTTCTCCCATGGTGGATCAATCACAATTGCATCAAATGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: CCGDKLLYLLLLLTD*FSHGGSITIASNVL Trigger: TAAGACATTTGATGCAATTGTGATTGATCCACCATGGGAGAACAAATCGGTTAAAAGAAGTAACAGGTACAGTAGTTTATCACCACAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS TCA 72 bp | ATAACAGACACATCATCTCCCATCAACTGTAGCGTTTaGAGCTCCATTTCATTTAAGGAAGGCAAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: ITDTSSPINCSV*SSISFKEGKCF Trigger: AAAACATTTGCCTTCCTTAAATGAAATGGAGCTTCAAACGCTACAGTTGATGGGAGATGATGTGTCTGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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| CDS CAA 72 bp | GATAAACTACTGTACCTGTTACTTCTTTTAACCGATTaGTTCTCCCATGGTGGATCAATCACAATTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: DKLLYLLLLLTD*FSHGGSITIAS Trigger: TGATGCAATTGTGATTGATCCACCATGGGAGAACAAATCGGTTAAAAGAAGTAACAGGTACAGTAGTTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171284.3 ENSMUST00000234990.2 |
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