Pregenerated sensors for METTL26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025731Ensembl transcript IDs: ENSMUST00000026827.16, ENSMUST00000110456.3, ENSMUST00000169085.8, ENSMUST00000169308.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACATCGCCCTGCCTACCATCCTCTCCAGGACCAAGCCACTGGCCTaGCCTAGTTCCTCCAGAAGGACTGTGTCACGAAGCCCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: HIALPTILSRTKPLA*PSSSRRTVSRSPHS Trigger: AGAGTGGGGGCTTCGTGACACAGTCCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGGAGAGGATGGTAGGCAGGGCGATGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR CCA 90 bp | ACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTTGTTGGCTaGCATGTCCACCTGGAAAAACGCTTTGCTGGAGTGACTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TEMLFFPKNQALVVG*HVHLEKRFAGVTWF Trigger: AAACCAAGTCACTCCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR CCA 90 bp | TTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTTGTTaGCTGGCATGTCCACCTGGAAAAACGCTTTGCTGGAGTGACTTG | + |
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Preference number: 1 (lower is better) Translates to: FDRDAILSEKSGTCC*LACPPGKTLCWSDL Trigger: CAAGTCACTCCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGGAGAGAGATCTTCCCATTaGCGGCATAGGGCCCGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VLYSPVATRPGGANLSQGERSSH*RHRARR Trigger: CCTACGGGCCCTATGCCGTCAATGGGAAGATCTCTC...TCCTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGACGAAGCCCCCACTCTaGGTTCCTGCATCTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RFSTALWPPDQEGLIYPKTKPPL*VPASEG Trigger: ACCCTCAGATGCAGGAACCCAGAGTGGGGGCTTCGT...CTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTGGTCAAAGTCCACGTTaGTCTGGGGAGAGATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LQNRFSTALWPPDQEGLIGQSPR*SGERSS Trigger: GGAAGATCTCTCCCCAGAGCAACGTGGACTTTGACC...AATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR-3UTR CCA 90 bp | GGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCATTCTCTACAGCCCTGTaGCCACCAGACCAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GFILRPLQNRFSTALWPPFSTAL*PPDQEG Trigger: CCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAA...TGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTATAGATAGCCCACAGTaGGCTGGAAAGGATTTATTT | + |
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Preference number: 2 (lower is better) Translates to: APSEQVLYSPVATRPGGAIDSPQ*AGKDLF Trigger: AAATAAATCCTTTCCAGCCCACTGTGGGCTATCTAT...AGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGAAGTCCACGTTGCTCTaGGGAGAGATCTTCCCATTG | + |
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Preference number: 2 (lower is better) Translates to: RFSTALWPPDQEGLIYPKKSTLL*GEIFPL Trigger: CAATGGGAAGATCTCTCCCCAGAGCAACGTGGACTT...CTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR-3UTR GCA 90 bp | ACCGTGACAACTTTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTAGGCGTGCGCCACCATaGCAGGCTGGAGTGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: TVTTFDRDAILSEKSGTCRRAPP*QAGVTL Trigger: AAGAGTCACTCCAGCCTGGCATGGTGGCGCACGCCT...ACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAAAGTTGTCACGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGTGACAACTTTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTTCCTGGAACTCACTCTaGCTCCCAAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TVTTFDRDAILSEKSGTCSWNSL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGTGAGTTCCAGGA...ACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAAAGTTGTCACGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTATAGATAGCCCACAGTaGGCTGGAAAGGATTTATTT | + |
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Preference number: 2 (lower is better) Translates to: PTVGWKGFILRPLQNRFSIDSPQ*AGKDLF Trigger: AAATAAATCCTTTCCAGCCCACTGTGGGCTATCTAT...AGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCACTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR-3UTR CCA 90 bp | ACCGTGACAACTTTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTATAGATAGCCCACAGTaGGCTGGAAAGGATTTATTT | + |
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Preference number: 2 (lower is better) Translates to: TVTTFDRDAILSEKSGTCIDSPQ*AGKDLF Trigger: AAATAAATCCTTTCCAGCCCACTGTGGGCTATCTAT...ACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAAAGTTGTCACGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| 3UTR CCA 72 bp | CTGCCTACCATCCTCTCCAGGACCAAGCCACTGGCCTaGCCTAGTTCCTCCAGAAGGACTGTGTCACGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LPTILSRTKPLA*PSSSRRTVSRS Trigger: GCTTCGTGACACAGTCCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGGAGAGGATGGTAGGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| 3UTR-3UTR CAA 90 bp | GGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAAAAATCAGGCACTTGTaGTTGGCTGGCATGTCCACC | + |
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Preference number: 3 (lower is better) Translates to: GFILRPLQNRFSTALWPPKIRHL*LAGMST Trigger: GGTGGACATGCCAGCCAACAACAAGTGCCTGATTTT...TGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | CCCCACTCTGGGTTCCTGCATCTGAGGGTCAGGTCAAAGTCCACGTTGCTCTGGCTGTCCAGGCAGCGTTaGTCCACGTCCGACGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PHSGFLHLRVRSKSTLLWLSRQR*STSDGC Trigger: GCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAG...CCAGAGCAACGTGGACTTTGACCTGACCCTCAGATGCAGGAACCCAGAGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| CDS-3UTR CCA 90 bp | AGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGACGAAGCCCCCACTCTaGGTTCCTGCATCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RPLQNRFSTALWPPDQEGTKPPL*VPASEG Trigger: ACCCTCAGATGCAGGAACCCAGAGTGGGGGCTTCGT...CCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR TCA 90 bp | GCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTCTGGGTTCCTGCATCTaGGGGTCAGGTCAAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: APSEQVLYSPVATRPGGALGSCI*GSGQSP Trigger: TGGACTTTGACCTGACCCTCAGATGCAGGAACCCAG...AGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGGACCTGTCCAGGCAGCGTTaGTCCACGTCCGACGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSTALWPPDQEGLIYPKDLSRQR*STSDGC Trigger: GCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAG...GTCCTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCGTCTGTCCAGGCAGCGTTaGTCCACGTCCGACGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GANLSQGLREGLRSSLYRLSRQR*STSDGC Trigger: GCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAG...ACGGTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCACCCCCACATCGCCCTaGCTACCATCCTCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EQVLYSPVATRPGGANLSTPTSP*LPSSPG Trigger: TCCTGGAGAGGATGGTAGGCAGGGCGATGTGGGGGT...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCGCGGAGCCTTCACATTaGACAACCCTTGGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: EQVLYSPVATRPGGANLSAEPSH*TTLGLG Trigger: CCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGC...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGGACCCAGGACCAAGCCACTaGCCTGGCCTAGTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSTALWPPDQEGLIYPKDPGPSH*PGLVPP Trigger: TGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGG...GTCCTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCCAGGACCAAGCCACTaGCCTGGCCTAGTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GGANLSQGLREGLRSSLYPGPSH*PGLVPP Trigger: TGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGG...GTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCGAGCAGGTGTCCTGCTaGTCTAAAGAGCCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EQVLYSPVATRPGGANLSEQVSC*SKEPLS Trigger: GGACAGGGGCTCTTTAGAGCAGCAGGACACCTGCTC...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| CDS-3UTR CCA 90 bp | AGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGTTCAGGGGGCTGATGTaGATCATATTGATGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPLQNRFSTALWPPDQEGFRGLM*IILMQS Trigger: GCTCTGCATCAATATGATCCACATCAGCCCCCTGAA...CCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | AACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCACGAAGCCCCCACTCTaGGTTCCTGCATCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: NRFSTALWPPDQEGLIYPTKPPL*VPASEG Trigger: ACCCTCAGATGCAGGAACCCAGAGTGGGGGCTTCGT...GGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCATCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GFILRPLQNRFSTALWPPSTSDG*HSAFGK Trigger: CTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGA...TGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGAGTACGGACAGGATaGGCTCCTTGTTTCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LRPLQNRFSTALWPPDQEGVRTG*APCFSQ Trigger: CTGAGAGAAACAAGGAGCCCATCCTGTCCGTACTCC...CTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GWKGFILRPLQNRFSTALSTSDG*HSAFGK Trigger: CTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGA...CAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACTTTGAGCAGGTGTCCTaGTGCTCTAAAGAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGANLSQGLREGLRSSLYFEQVS*CSKEPL Trigger: GAGGGGCTCTTTAGAGCAGCAGGACACCTGCTCAAA...GTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACGGTCAAAGTCCACGTTaGTCTGGGGAGAGATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGANLSQGLREGLRSSLYGQSPR*SGERSS Trigger: GGAAGATCTCTCCCCAGAGCAACGTGGACTTTGACC...GTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | CTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTGCACTTGTTGTTGGCTaGCATGTCCACCATCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LQNRFSTALWPPDQEGLIALVVG*HVHHPL Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAGTGC...AATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026827.16 |
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| CDS-3UTR TCA 90 bp | AAATCAGGCACTTGTTGTTGGCTGGCATGTCCACCTGGAAAAACGCTTTGCTGGGAGAGATCTTCCCATTaGCGGCATAGGGCCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: KSGTCCWLACPPGKTLCWERSSH*RHRARR Trigger: CCTACGGGCCCTATGCCGTCAATGGGAAGATCTCTC...CCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LERIYFKAPSEQVLYSPVSTSDG*HSAFGK Trigger: CTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGA...CACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | ATCAGGCACTTGTTGTTGGCTGGCATGTCCACCTGGAAAAACGCTTTGCTGGAGGAGCAGGTGTCCTGCTaGTCTAAAGAGCCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IRHLLLAGMSTWKNALLEEQVSC*SKEPLC Trigger: ACAGAGGGGCTCTTTAGAGCAGCAGGACACCTGCTC...CTCCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | GCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCGTGACTTTGAGCAGGTGTCCTaGTGCTCTAAAGAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ANLSQGLREGLRSSLYRDFEQVS*CSKEPL Trigger: GAGGGGCTCTTTAGAGCAGCAGGACACCTGCTCAAA...GTCACGGTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCGCGGAGCCTTCACATTaGACAACCCTTGGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: VGWKGFILRPLQNRFSTAAEPSH*TTLGLG Trigger: CCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGC...GGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR TCA 90 bp | GTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCGAGAGATCTTCCCATTaGCGGCATAGGGCCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VGWKGFILRPLQNRFSTAERSSH*RHRARR Trigger: CCTACGGGCCCTATGCCGTCAATGGGAAGATCTCTC...GGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | CCCACAGTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACCAAGCCACTGGCCTaGCCTAGTTCCTCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PTVGWKGFILRPLQNRFSTKPLA*PSSSRR Trigger: CCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGT...AGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCACTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGAGAGCAGGTGTCCTGCTaGTCTAAAGAGCCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IYFKAPSEQVLYSPVATREQVSC*SKEPLC Trigger: ACAGAGGGGCTCTTTAGAGCAGCAGGACACCTGCTC...TCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR GCA 90 bp | AAATCAGGCACTTGTTGTTGGCTGGCATGTCCACCTGGAAAAACGCTTTGCTGGTTTGAGCAGGTGTCCTaGTGCTCTAAAGAGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KSGTCCWLACPPGKTLCWFEQVS*CSKEPL Trigger: CAGGGGCTCTTTAGAGCAGCAGGACACCTGCTCAAA...CCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| CDS-3UTR CCA 90 bp | GGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGGAGTACGGACAGGATaGGCTCCTTGTTTCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GFILRPLQNRFSTALWPPGVRTG*APCFSQ Trigger: CTGAGAGAAACAAGGAGCCCATCCTGTCCGTACTCC...TGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169308.8 |
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| CDS-3UTR TCA 90 bp | TGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCTGGGTTCCTGCATCTaGGGGTCAGGTCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WKGFILRPLQNRFSTALWLGSCI*GSGQSP Trigger: TGGACTTTGACCTGACCCTCAGATGCAGGAACCCAG...CCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGGGTCAAAGTCCACGTTaGTCTGGGGAGAGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWKGFILRPLQNRFSTALGQSPR*SGERSS Trigger: GGAAGATCTCTCCCCAGAGCAACGTGGACTTTGACC...CAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCTCAGGCACTTGTTGTTaGCTGGCATGTCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VGWKGFILRPLQNRFSTASGTCC*LACPPS Trigger: GGATGGTGGACATGCCAGCCAACAACAAGTGCCTGA...GGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026827.16 |
||
| CDS-3UTR CCA 90 bp | GGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCATTCAGGGGGCTGATGTaGATCATATTGATGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFILRPLQNRFSTALWPPFRGLM*IILMQS Trigger: GCTCTGCATCAATATGATCCACATCAGCCCCCTGAA...TGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | GTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCAAGTCCACGTTGCTCTaGGGAGAGATCTTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VGWKGFILRPLQNRFSTAKSTLL*GEIFPL Trigger: CAATGGGAAGATCTCTCCCCAGAGCAACGTGGACTT...GGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CCA 90 bp | ACCGTGACAACTTTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTACCAAGCCACTGGCCTaGCCTAGTTCCTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTTFDRDAILSEKSGTCTKPLA*PSSSRR Trigger: CCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGT...ACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAAAGTTGTCACGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGACAACTTTTGACAGAGATGCTATTCTTTCCGAAAAATCAGGCACTTGTAAGTCCACGTTGCTCTaGGGAGAGATCTTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTTFDRDAILSEKSGTCKSTLL*GEIFPL Trigger: CAATGGGAAGATCTCTCCCCAGAGCAACGTGGACTT...ACAAGTGCCTGATTTTTCGGAAAGAATAGCATCTCTGTCAAAAGTTGTCACGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
||
| CDS GCA 90 bp | GGCTGCCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTGCCGCGTaGTGTCCAGAGCCCGAGGCCACCTCGAGCACGCGAACACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GCHSAFGKACAKCAA*CPEPEATSSTRTQR Trigger: GCGCTGTGTTCGCGTGCTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS GCA 90 bp | GTCCGACGGCTGCCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTaGCGCGTGCTGTCCAGAGCCCGAGGCCACCTCGAGCACGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VRRLPLGIREGLCKV*RVLSRARGHLEHAN Trigger: GTTCGCGTGCTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
||
| CDS GCA 90 bp | TTGGTCCACGTCCGACGGCTGCCACTCGGCATTCGGGAAGGCCTGTaGAAAGTGTGCCGCGTGCTGTCCAGAGCCCGAGGCCACCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVHVRRLPLGIREGL*KVCRVLSRARGHLE Trigger: CTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS GCA 90 bp | GTGGCGGCAATGCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTGCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAAMLSRQRWSTSDG*HSAFGKACAKCAAC Trigger: GCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 90 bp | AACCCTTGGGCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTTaGTCCACGTCCGACGGCTGCCACTCGGCATTCGGGAAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NPWARVVAAMLSRQR*STSDGCHSAFGKAC Trigger: ACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS GCA 90 bp | GAGCCTTCACATTGGACAACCCTTGGGCTCGGGTGGTGGCGGCAATaGTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTGCCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPSHWTTLGLGWWRQ*CPGSVGPRPTAATR Trigger: CCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 90 bp | CACTCTGGGTTCCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTGCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSGFLSRQRWSTSDG*HSAFGKACAKCAAC Trigger: GCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGGAACCCAGAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169085.8 |
||
| CDS CCA 90 bp | TGCTGTCCAGAGCCCGAGGCCACCTCGAGCACGCGAACACAGCGCTaGGCAGGATCCACATACTGGCGGAGTACGGACAGGATGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCPEPEATSSTRTQR*AGSTYWRSTDRMGS Trigger: GGAGCCCATCCTGTCCGTACTCCGCCAGTATGTGGATCCTGCCCAGCGCTGTGTTCGCGTGCTCGAGGTGGCCTCGGGCTCTGGACAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS GCA 90 bp | TCTAAAGAGCCCCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTGCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKEPLSRQRWSTSDG*HSAFGKACAKCAAC Trigger: GCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGGGGCTCTTTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
||
| CDS CCA 90 bp | GGTACAGCGGAGCCTTCACATTGGACAACCCTTGGGCTCGGGTGGTaGCGGCAATGCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTAEPSHWTTLGLGW*RQCCPGSVGPRPTA Trigger: AGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 90 bp | CCAGGTACAGCGGAGCCTTCACATTGGACAACCCTTGGGCTCGGGTaGTGGCGGCAATGCTGTCCAGGCAGCGTTGGTCCACGTCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: PGTAEPSHWTTLGLG*WRQCCPGSVGPRPT Trigger: CGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS CCA 90 bp | GCTCCCACTCCCAGGTCACGTCCAGGTACAGCGGAGCCTTCACATTaGACAACCCTTGGGCTCGGGTGGTGGCGGCAATGCTGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: APTPRSRPGTAEPSH*TTLGLGWWRQCCPG Trigger: GCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 90 bp | ATGCAGAGCAACAGGTCCAGCGATCGGGGTGGGATGCCGCCCCATTaGTCCCACTCCCAGGTCACGTCCAGGTACAGCGGAGCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MQSNRSSDRGGMPPH*SHSQVTSRYSGAFT Trigger: TGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTTGCTCTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 90 bp | CAGGTCACGTCCAGGTACAGCGGAGCCTTCACATTGGACAACCCTTaGGCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVTSRYSGAFTLDNP*ARVVAAMLSRQRWS Trigger: GGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 90 bp | GCCACCTCGAGCACGCGAACACAGCGCTGGGCAGGATCCACATACTaGCGGAGTACGGACAGGATGGGCTCCTTGTTTCTCTCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATSSTRTQRWAGSTY*RSTDRMGSLFLSAA Trigger: GGCTGCTGAGAGAAACAAGGAGCCCATCCTGTCCGTACTCCGCCAGTATGTGGATCCTGCCCAGCGCTGTGTTCGCGTGCTCGAGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | AGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGCCTGTCCAGGCAGCGTaGGTCCACGTCCGACGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFSTALWPPDQEGLIYPKPVQAA*VHVRRL Trigger: CAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGG...CTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| CDS CCA 90 bp | TTGGCTGGCATGTCCACCATCCTCTCCAGGACCAAGCCACTGGCCTaGCCTAGTTCCTCCAGAAGGACTGTGTCACGAAGCCCCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAGMSTILSRTKPLA*PSSSRRTVSRSPHS Trigger: AGAGTGGGGGCTTCGTGACACAGTCCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGGAGAGGATGGTGGACATGCCAGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169085.8 |
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| CDS CCA 90 bp | TGTTGTTGGCTGGCATGTCCACCATCCTCTCCAGGACCAAGCCACTaGCCTGGCCTAGTTCCTCCAGAAGGACTGTGTCACGAAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCWLACPPSSPGPSH*PGLVPPEGLCHEAP Trigger: GGGGGCTTCGTGACACAGTCCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGGAGAGGATGGTGGACATGCCAGCCAACAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169085.8 |
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| CDS-3UTR CAA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCTGGGATGCCGCCCCATaGCTCCCACTCCCAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQVLYSPVATRPGGANLSWDAAP*LPLPGH Trigger: GTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCA...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 90 bp | GATGTGGATCATATTGATGCAGAGCAACAGGTCCAGCGATCGGGGTaGGATGCCGCCCCATTGCTCCCACTCCCAGGTCACGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DVDHIDAEQQVQRSG*DAAPLLPLPGHVQV Trigger: TACCTGGACGTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTTGCTCTGCATCAATATGATCCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | AAATCAGGCACTTGTTGTTGGCTGGCATGTCCACCTGGAAAAACGCTTTGCTGGGCTGTCCAGGCAGCGTaGGTCCACGTCCGACGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSGTCCWLACPPGKTLCWAVQAA*VHVRRL Trigger: CAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGC...CCAGCAAAGCGTTTTTCCAGGTGGACATGCCAGCCAACAACAAGTGCCTGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGTGATCAGCACAGCCTaGGTTTTGAGCAGGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAPSEQVLYSPVATRPGGVISTA*VLSRCP Trigger: AGGACACCTGCTCAAAACCAAGGCTGTGCTGATCAC...CCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGAGCTGTCCAGGCAGCGTaGGTCCACGTCCGACGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYFKAPSEQVLYSPVATRAVQAA*VHVRRL Trigger: CAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGC...TCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCCTGTGGCCACCAGATGGGATGCCGCCCCATaGCTCCCACTCCCAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: IYFKAPSEQVLYSPVATRWDAAP*LPLPGH Trigger: GTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCA...TCTGGTGGCCACAGGGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCGTGATCAGCACAGCCTaGGTTTTGAGCAGGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EQVLYSPVATRPGGANLSVISTA*VLSRCP Trigger: AGGACACCTGCTCAAAACCAAGGCTGTGCTGATCAC...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCGTAGGTCAAAGTCCACGTaGCTCTGGGGAGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GANLSQGLREGLRSSLYRRSKST*LWGEIF Trigger: GAAGATCTCTCCCCAGAGCAACGTGGACTTTGACCT...ACGGTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCGTATCAGGCACTTGTTGTaGGCTGGCATGTCCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: GANLSQGLREGLRSSLYRIRHLL*AGMSTI Trigger: GATGGTGGACATGCCAGCCAACAACAAGTGCCTGAT...ACGGTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026827.16 |
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| CDS-3UTR CAA 90 bp | GGGGCTAATTTATCCCAAGGACTGAGGGAGGGGCTGAGGTCTAGCTTGTACCGTAAAATCAGGCACTTGTaGTTGGCTGGCATGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GANLSQGLREGLRSSLYRKIRHL*LAGMST Trigger: GGTGGACATGCCAGCCAACAACAAGTGCCTGATTTT...ACGGTACAAGCTAGACCTCAGCCCCTCCCTCAGTCCTTGGGATAAATTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026827.16 |
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| CDS-3UTR CAA 90 bp | GAACAGGTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCGAAAAATCAGGCACTaGTTGTTGGCTGGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EQVLYSPVATRPGGANLSRKIRH*LLAGMS Trigger: GGACATGCCAGCCAACAACAAGTGCCTGATTTTTCG...GGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAACCTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026827.16 |
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| CDS-3UTR CAA 90 bp | GTTCTCTACAGCCCTGTGGCCACCAGACCAGGAGGGGCTAATTTATCCCAAGGACTGATGTGGATCATATaGATGCAGAGCAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLYSPVATRPGGANLSQGLMWII*MQSNRS Trigger: GGACCTGTTGCTCTGCATCAATATGATCCACATCAG...TCCTTGGGATAAATTAGCCCCTCCTGGTCTGGTGGCCACAGGGCTGTAGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGCTGGAAAGGATTTATTTTAAGGCCCCTTCAGAACAGGTTCTCTACAGCCAGGTCAAAGTCCACGTaGCTCTGGGGAGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGWKGFILRPLQNRFSTARSKST*LWGEIF Trigger: GAAGATCTCTCCCCAGAGCAACGTGGACTTTGACCT...GGCTGTAGAGAACCTGTTCTGAAGGGGCCTTAAAATAAATCCTTTCCAGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS CCA 72 bp | GCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTTaGTCCACGTCCGACGGCTGCCACTCGGCATTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARVVAAMLSRQR*STSDGCHSAFG Trigger: CCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS CAA 72 bp | GGCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTaGGTCCACGTCCGACGGCTGCCACTCGGCATTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGGGGNAVQAA*VHVRRLPLGIR Trigger: CCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS CAA 90 bp | CAACCCTTGGGCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTaGGTCCACGTCCGACGGCTGCCACTCGGCATTCGGGAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPLGSGGGGNAVQAA*VHVRRLPLGIREGL Trigger: CAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
||
| CDS GCA 72 bp | GTCCGACGGCTGCCACTCGGCATTCGGGAAGGCCTGTaGAAAGTGTGCCGCGTGCTGTCCAGAGCCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRRLPLGIREGL*KVCRVLSRARG Trigger: GCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
||
| CDS GCA 72 bp | TCGGCATTCGGGAAGGCCTGTGCAAAGTGTGCCGCGTaGTGTCCAGAGCCCGAGGCCACCTCGAGCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SAFGKACAKCAA*CPEPEATSSTR Trigger: TCGCGTGCTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
||
| CDS GCA 72 bp | CTGCCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGTaGCGCGTGCTGTCCAGAGCCCGAGGCCACCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPLGIREGLCKV*RVLSRARGHLE Trigger: CTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
||
| CDS CCA 72 bp | GAGCCCGAGGCCACCTCGAGCACGCGAACACAGCGCTaGGCAGGATCCACATACTGGCGGAGTACGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: EPEATSSTRTQR*AGSTYWRSTDR Trigger: CCTGTCCGTACTCCGCCAGTATGTGGATCCTGCCCAGCGCTGTGTTCGCGTGCTCGAGGTGGCCTCGGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS CAA 72 bp | CAACAGGTCCAGCGATCGGGGTGGGATGCCGCCCCATaGCTCCCACTCCCAGGTCACGTCCAGGTACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: QQVQRSGWDAAP*LPLPGHVQVQR Trigger: CCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | CATTGGACAACCCTTGGGCTCGGGTGGTGGCGGCAATaGTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: HWTTLGLGWWRQ*CPGSVGPRPTA Trigger: AGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | AACAGGTCCAGCGATCGGGGTGGGATGCCGCCCCATTaGTCCCACTCCCAGGTCACGTCCAGGTACAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: NRSSDRGGMPPH*SHSQVTSRYSG Trigger: TCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | CCCCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PLSRQRWSTSDG*HSAFGKACAKC Trigger: ACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110456.3 |
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| CDS CAA 90 bp | GATGCAGAGCAACAGGTCCAGCGATCGGGGTGGGATGCCGCCCCATaGCTCCCACTCCCAGGTCACGTCCAGGTACAGCGGAGCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DAEQQVQRSGWDAAP*LPLPGHVQVQRSLH Trigger: GTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTTGCTCTGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 72 bp | CCCAGGTCACGTCCAGGTACAGCGGAGCCTTCACATTaGACAACCCTTGGGCTCGGGTGGTGGCGGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: PRSRPGTAEPSH*TTLGLGWWRQC Trigger: GCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CAA 90 bp | CCAGGTCACGTCCAGGTACAGCGGAGCCTTCACATTGGACAACCCTaGGGCTCGGGTGGTGGCGGCAATGCTGTCCAGGCAGCGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PGHVQVQRSLHIGQP*GSGGGGNAVQAALV Trigger: GACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CAA 90 bp | TGCTCCCACTCCCAGGTCACGTCCAGGTACAGCGGAGCCTTCACATaGGACAACCCTTGGGCTCGGGTGGTGGCGGCAATGCTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSHSQVTSRYSGAFT*DNPWARVVAAMLSR Trigger: CCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | ATGCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: MLSRQRWSTSDG*HSAFGKACAKC Trigger: ACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | TTCCTGTCCAGGCAGCGTTGGTCCACGTCCGACGGCTaGCACTCGGCATTCGGGAAGGCCTGTGCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FLSRQRWSTSDG*HSAFGKACAKC Trigger: ACACTTTGCACAGGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169085.8 |
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| CDS CCA 72 bp | GAGCCTTCACATTGGACAACCCTTGGGCTCGGGTGGTaGCGGCAATGCTGTCCAGGCAGCGTTGGTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: EPSHWTTLGLGW*RQCCPGSVGPR Trigger: ACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CAA 72 bp | TCCCAGGTCACGTCCAGGTACAGCGGAGCCTTCACATaGGACAACCCTTGGGCTCGGGTGGTGGCGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SQVTSRYSGAFT*DNPWARVVAAM Trigger: CATTGCCGCCACCACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 72 bp | CATATTGATGCAGAGCAACAGGTCCAGCGATCGGGGTaGGATGCCGCCCCATTGCTCCCACTCCCAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HIDAEQQVQRSG*DAAPLLPLPGH Trigger: GTGACCTGGGAGTGGGAGCAATGGGGCGGCATCCCACCCCGATCGCTGGACCTGTTGCTCTGCATCAATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 72 bp | GGGCAGGATCCACATACTGGCGGAGTACGGACAGGATaGGCTCCTTGTTTCTCTCAGCAGCCGCAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: GQDPHTGGVRTG*APCFSQQPQPS Trigger: TGATGGCTGCGGCTGCTGAGAGAAACAAGGAGCCCATCCTGTCCGTACTCCGCCAGTATGTGGATCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026827.16 ENSMUST00000110456.3 ENSMUST00000169085.8 ENSMUST00000169308.8 |
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| CDS CAA 72 bp | CCCTCTGTGCAGTTCAGGGGGCTGATGTGGATCATATaGATGCAGAGCAACAGGTCCAGCGATCGGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSVQFRGLMWII*MQSNRSSDRGG Trigger: CCCACCCCGATCGCTGGACCTGTTGCTCTGCATCAATATGATCCACATCAGCCCCCTGAACTGCACAGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS GCA 72 bp | GGTGATCAGCACAGCCTTGGTTTTGAGCAGGTGTCCTaGTGCTCTAAAGAGCCCCTCTGTGCAGTTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GDQHSLGFEQVS*CSKEPLCAVQG Trigger: CCCCTGAACTGCACAGAGGGGCTCTTTAGAGCAGCAGGACACCTGCTCAAAACCAAGGCTGTGCTGATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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| CDS CCA 72 bp | CTAAAGAGCCCCTCTGTGCAGTTCAGGGGGCTGATGTaGATCATATTGATGCAGAGCAACAGGTCCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LKSPSVQFRGLM*IILMQSNRSSD Trigger: ATCGCTGGACCTGTTGCTCTGCATCAATATGATCCACATCAGCCCCCTGAACTGCACAGAGGGGCTCTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026827.16 ENSMUST00000169308.8 |
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