Pregenerated sensors for METTL25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036009Ensembl transcript IDs: ENSMUST00000046638.10, ENSMUST00000176040.2, ENSMUST00000176924.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACCATCGGTGGCAGACAGGTCTGGATTCCCAAGCCTGCTCCTCTaGACGCTCTCAGCGTCCCCCTTACACTCCACTCCCTTTGGCACT | + |
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Preference number: 1 (lower is better) Translates to: KPSVADRSGFPSLLL*TLSASPLHSTPFGT Trigger: AGTGCCAAAGGGAGTGGAGTGTAAGGGGGACGCTGAGAGCGTGCAGAGGAGCAGGCTTGGGAATCCAGACCTGTCTGCCACCGATGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR TCA 90 bp | CTAGCACTCTGCTTCAGCCACGATCACACTGCTTCTTCAGAGCAATaGCAGCGTAGCATCTGGGCGACTGCACAGGGTCAAACAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: LALCFSHDHTASSEQ*QRSIWATAQGQTTS Trigger: TGAAGTTGTTTGACCCTGTGCAGTCGCCCAGATGCTACGCTGTCATTGCTCTGAAGAAGCAGTGTGATCGTGGCTGAAGCAGAGTGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 90 bp | CTCAGAAGGAGTGCACAGTCCCAAGTTTTGCACAGAATAGTGCTTTaGAGTTCGGGCAAAAGCTTCCACACTCAACAGCTTCTGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: LRRSAQSQVLHRIVL*SSGKSFHTQQLLRS Trigger: ACTTCTCAGAAGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGCAAAACTTGGGACTGTGCACTCCTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CCA 90 bp | TCAATTGCCTTCACATTTTCATCAACTCTCTGCCTTTTATTTCCTTaGAGGGCTGTGAGCAACTGCTCAGAAGGAGTGCACAGTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SIAFTFSSTLCLLFP*RAVSNCSEGVHSPK Trigger: CTTGGGACTGTGCACTCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAATGTGAAGGCAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CCA 90 bp | ATTACGGCCGCAGCACCATCTCTCCTCTTTCAGATAGTGGCACATTaGAAACCCCCAGTTTTCGTTAGCACATCTATCTTTATGCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: ITAAAPSLLFQIVAH*KPPVFVSTSIFMLV Trigger: AACCAGCATAAAGATAGATGTGCTAACGAAAACTGGGGGTTTCCAATGTGCCACTATCTGAAAGAGGAGAGATGGTGCTGCGGCCGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 90 bp | TTTGTATTCATAAACTCAATTGCCTTCACATTTTCATCAACTCTCTaGCTTTTATTTCCTTGGAGGGCTGTGAGCAACTGCTCAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: FVFINSIAFTFSSTL*LLFPWRAVSNCSEG Trigger: TCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAATGTGAAGGCAATTGAGTTTATGAATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCAAACCATCGGTGGCAGACAGGTCTGGATTCCCAAGCCTGCTCCTCTGCGCACTTTCAACTCTCTaGGCCTTTCTGATGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGKPSVADRSGFPSLLLCALSTL*AFLMPS Trigger: GCTGGGCATCAGAAAGGCCCAGAGAGTTGAAAGTGC...GCAGAGGAGCAGGCTTGGGAATCCAGACCTGTCTGCCACCGATGGTTTGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTGGCACTTTCAACTCTCTGGGCCTTTCTGATGCCCAGCCGTTGGCGTCTTGCCTTTTATTTCCTTaGAGGGCTGTGAGCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: PFGTFNSLGLSDAQPLASCLLFP*RAVSNC Trigger: GCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCA...AGACGCCAACGGCTGGGCATCAGAAAGGCCCAGAGAGTTGAAAGTGCCAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGACTGCACAGGGTCAAACAACTTCACGAGGGCAGACCAGGCTACACCGTCCATTTTCTTCCTCAGCTaGCTGAGCAAGCACGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: GDCTGSNNFTRADQATPSIFFLS*LSKHVF Trigger: AAAAACGTGCTTGCTCAGCCAGCTGAGGAAGAAAAT...GGACGGTGTAGCCTGGTCTGCCCTCGTGAAGTTGTTTGACCCTGTGCAGTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCAGCACCATCTCTCCTCTTTCAGATAGTGGCACATTGGAAACCCCCAGTTACCCACACTGCAAACTaGCTTGACTTCAGCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: AAAPSLLFQIVAHWKPPVTHTAN*LDFSLG Trigger: TCCAAGGCTGAAGTCAAGGCAGTTTGCAGTGTGGGT...AACTGGGGGTTTCCAATGTGCCACTATCTGAAAGAGGAGAGATGGTGCTGCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 90 bp | GAGGGCTGTGAGCAACTGCTCAGAAGGAGTGCACAGTCCCAAGTTTaGCACAGAATAGTGCTTTGCAGTTCGGGCAAAAGCTTCCACACT | + |
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Preference number: 2 (lower is better) Translates to: EGCEQLLRRSAQSQV*HRIVLCSSGKSFHT Trigger: AGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGCAAAACTTGGGACTGTGCACTCCTTCTGAGCAGTTGCTCACAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR-3UTR TCA 90 bp | CGTAGCATCTGGGCGACTGCACAGGGTCAAACAACTTCACGAGGGCAGACCAGGAATGTCATGCAATTGTaGATCAGCAGTGATGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RSIWATAQGQTTSRGQTRNVMQL*ISSDER Trigger: TCTTTCATCACTGCTGATTCACAATTGCATGACATT...CCTGGTCTGCCCTCGTGAAGTTGTTTGACCCTGTGCAGTCGCCCAGATGCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGACTGCACAGGGTCAAACAACTTCACGAGGGCAGACCAGGCTACACCGTCCTCTTCAATAATGTCATaGAATTGTGAATCAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GDCTGSNNFTRADQATPSSSIMS*NCESAV Trigger: CACTGCTGATTCACAATTGCATGACATTATTGAAGA...GGACGGTGTAGCCTGGTCTGCCCTCGTGAAGTTGTTTGACCCTGTGCAGTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 90 bp | GCTCAGAAGGAGTGCACAGTCCCAAGTTTTGCACAGAATAGTGCTTaGCAGTTCGGGCAAAAGCTTCCACACTCAACAGCTTCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AQKECTVPSFAQNSA*QFGQKLPHSTASEK Trigger: CTTCTCAGAAGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGCAAAACTTGGGACTGTGCACTCCTTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CAA 90 bp | CTCAATTGCCTTCACATTTTCATCAACTCTCTGCCTTTTATTTCCTaGGAGGGCTGTGAGCAACTGCTCAGAAGGAGTGCACAGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LNCLHIFINSLPFIS*EGCEQLLRRSAQSQ Trigger: TTGGGACTGTGCACTCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAATGTGAAGGCAATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGTAATCAGCAATACTGCAGATTAGCTCTGACATTGCCTGAACCTCATGAGTTTTGGGGAGCTCAGTaGAACTATTGTAGCATCATC | + |
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Preference number: 2 (lower is better) Translates to: HSNQQYCRLALTLPEPHEFWGAQ*NYCSII Trigger: GATGATGCTACAATAGTTTCACTGAGCTCCCCAAAA...CTCATGAGGTTCAGGCAATGTCAGAGCTAATCTGCAGTATTGCTGATTACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176040.2 |
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| 3UTR CAA 90 bp | GTGATGAAAGAGGTTAGTGGTGAATATATGCTTGAGTCCCTTGCCTaGGATGCCGTATTTCTTCTCTCTTTTCTCAGTCCAGACTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VMKEVSGEYMLESLA*DAVFLLSFLSPDFS Trigger: AGAAAAGTCTGGACTGAGAAAAGAGAGAAGAAATACGGCATCCAAGGCAAGGGACTCAAGCATATATTCACCACTAACCTCTTTCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCATCAACTCTCTGCCTTTTATTTCCTTGGAGGGCTGTGAGCAACTGCTCATTAACTTTCAATCTCTaGAACATTTCCAACAGTTCG | + |
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Preference number: 2 (lower is better) Translates to: FSSTLCLLFPWRAVSNCSLTFNL*NISNSS Trigger: CGAACTGTTGGAAATGTTGCAGAGATTGAAAGTTAA...TGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | GTGGCAGACAGGTCTGGATTCCCAAGCCTGCTCCTCTaGACGCTCTCAGCGTCCCCCTTACACTCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: VADRSGFPSLLL*TLSASPLHSTP Trigger: GGGAGTGGAGTGTAAGGGGGACGCTGAGAGCGTGCAGAGGAGCAGGCTTGGGAATCCAGACCTGTCTGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | AACCATCGGTGGCAGACAGGTCTGGATTCCCAAGCCTaGTCCTCTGCACGCTCTCAGCGTCCCCCTTACACT | + |
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Preference number: 3 (lower is better) Translates to: NHRWQTGLDSQA*SSARSQRPPYT Trigger: AGTGTAAGGGGGACGCTGAGAGCGTGCAGAGGAGCAGGCTTGGGAATCCAGACCTGTCTGCCACCGATGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CCA 72 bp | CTTTCAACTCTCTGGGCCTTTCTGATGCCCAGCCGTTaGCGTCTGCTCTTGAGTGAGGGTGATACAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSTLWAFLMPSR*RLLLSEGDTGS Trigger: GGAGCCTGTATCACCCTCACTCAAGAGCAGACGCCAACGGCTGGGCATCAGAAAGGCCCAGAGAGTTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CCA 72 bp | CCTTACACTCCACTCCCTTTGGCACTTTCAACTCTCTaGGCCTTTCTGATGCCCAGCCGTTGGCGTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: PYTPLPLALSTL*AFLMPSRWRLL Trigger: GAGCAGACGCCAACGGCTGGGCATCAGAAAGGCCCAGAGAGTTGAAAGTGCCAAAGGGAGTGGAGTGTAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR TCA 72 bp | TGCTTCAGCCACGATCACACTGCTTCTTCAGAGCAATaGCAGCGTAGCATCTGGGCGACTGCACAGGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: CFSHDHTASSEQ*QRSIWATAQGQ Trigger: TTGACCCTGTGCAGTCGCCCAGATGCTACGCTGTCATTGCTCTGAAGAAGCAGTGTGATCGTGGCTGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | AAAGCAGTAAGTCCCCAGCCAGGCTGTCTAGCACTCTaGTTCAGCCACGATCACACTGCTTCTTCAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KAVSPQPGCLAL*FSHDHTASSEQ Trigger: TTGCTCTGAAGAAGCAGTGTGATCGTGGCTGAAGCAGAGTGCTAGACAGCCTGGCTGGGGACTTACTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | ATCCGCAGAGTACTGGGTGCAAGGTCACCACAGGTATaGAGTCCCACCATTAAACAGTCCTCCAGATCTTCA | + |
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Preference number: 3 (lower is better) Translates to: IRRVLGARSPQV*SPTIKQSSRSS Trigger: TGAAGATCTGGAGGACTGTTTAATGGTGGGACTGCATACCTGTGGTGACCTTGCACCCAGTACTCTGCGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCAAACCATCGGTGGCAGACAGGTCTGGATTCCCAAGCCTGCTCCTCTGCACAGTTCGTTTGCATTaGTTATTTAAACTCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SGKPSVADRSGFPSLLLCTVRLH*LFKLSA Trigger: GGCTGAGAGTTTAAATAACAAATGCAAACGAACTGT...GCAGAGGAGCAGGCTTGGGAATCCAGACCTGTCTGCCACCGATGGTTTGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR TCA 72 bp | CATCAACTCTCTGCCTTTTATTTCCTTGGAGGGCTGTaGGCAACTGCTCAGAAGGAGTGCACAGTCCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: HQLSAFYFLGGL*ATAQKECTVPS Trigger: ACTTGGGACTGTGCACTCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | CTCTGCCTTTTATTTCCTTGGAGGGCTGTGAGCAACTaGTCAGAAGGAGTGCACAGTCCCAAGTTTTGCACA | + |
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Preference number: 3 (lower is better) Translates to: LCLLFPWRAVSN*SEGVHSPKFCT Trigger: TGTGCAAAACTTGGGACTGTGCACTCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAATAGTGCTTTGCAGTTCGGGCAAAAGCTTCCACACTCAACAGCTTCTGGCACAGAATAGTGCTTaGCAGTTCGGGCAAAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: HRIVLCSSGKSFHTQQLLAQNSA*QFGQKL Trigger: AAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGC...CAGAAGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | AGTGCACAGTCCCAAGTTTTGCACAGAATAGTGCTTTaGAGTTCGGGCAAAAGCTTCCACACTCAACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SAQSQVLHRIVL*SSGKSFHTQQL Trigger: AAGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGCAAAACTTGGGACTGTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR-3UTR CAA 90 bp | CACATTTTCATCAACTCTCTGCCTTTTATTTCCTTGGAGGGCTGTGAGCAACTGGCACAGAATAGTGCTTaGCAGTTCGGGCAAAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: HIFINSLPFISLEGCEQLAQNSA*QFGQKL Trigger: AAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGC...CAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CCA 72 bp | GCAGCACCATCTCTCCTCTTTCAGATAGTGGCACATTaGAAACCCCCAGTTTTCGTTAGCACATCTATCTTT | + |
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Preference number: 3 (lower is better) Translates to: AAPSLLFQIVAH*KPPVFVSTSIF Trigger: AAAGATAGATGTGCTAACGAAAACTGGGGGTTTCCAATGTGCCACTATCTGAAAGAGGAGAGATGGTGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | CTTCTCTCTTTTCTCAGTCCAGACTTTTCTGTGTTCTaGACCTGTGATGAAGTAGGTTCGATGGCATCAACA | + |
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Preference number: 3 (lower is better) Translates to: LLSFLSPDFSVF*TCDEVGSMAST Trigger: TGTTGATGCCATCGAACCTACTTCATCACAGGTGCAGAACACAGAAAAGTCTGGACTGAGAAAAGAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAATAGTGCTTTGCAGTTCGGGCAAAAGCTTCCACACTCAACAGCTTCTGGTTTCACAAAATATTTaGGGGAGCTCAGTGAAACTA | + |
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Preference number: 3 (lower is better) Translates to: HRIVLCSSGKSFHTQQLLVSQNI*GSSVKL Trigger: TAGTTTCACTGAGCTCCCCAAAATATTTTGTGAAAC...CAGAAGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176040.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATAGTGGCACATTGGAAACCCCCAGTTTTCGTTAGCACATCTATCTTTATGAGATTAGCTCTGACATaGCCTGAACCTCATGAGATT | + |
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Preference number: 3 (lower is better) Translates to: QIVAHWKPPVFVSTSIFMRLALT*PEPHEI Trigger: AATCTCATGAGGTTCAGGCAATGTCAGAGCTAATCT...CATAAAGATAGATGTGCTAACGAAAACTGGGGGTTTCCAATGTGCCACTATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | CAATTATCTGCTTTAAGCCACAGTAATCAGCAATACTaGAGATTAGCTCTGACATTGCCTGAACCTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: QLSALSHSNQQY*RLALTLPEPHE Trigger: CTCATGAGGTTCAGGCAATGTCAGAGCTAATCTGCAGTATTGCTGATTACTGTGGCTTAAAGCAGATAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | ACCATTAAACAGTCCTCCAGATCTTCAATAATGTCATaGAATTGTGAATCAGCAGTGATGAAAGAGGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: TIKQSSRSSIMS*NCESAVMKEVS Trigger: ACTAACCTCTTTCATCACTGCTGATTCACAATTGCATGACATTATTGAAGATCTGGAGGACTGTTTAATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR GCA 72 bp | AACTTTCAATCTCTGCAACATTTCCAACAGTTCGTTTaGATTTGTTATTTAAACTCTCAGCCTCCACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: NFQSLQHFQQFV*ICYLNSQPPQN Trigger: GTTTTGTGGAGGCTGAGAGTTTAAATAACAAATGCAAACGAACTGTTGGAAATGTTGCAGAGATTGAAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTGGCACTTTCAACTCTCTGGGCCTTTCTGATGCCCAGCCGTTGGCGTACTTGTCGTGCAGCGTaGGCAGGTCCGGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPLALSTLWAFLMPSRWRTCRAA*AGPGSW Trigger: CCAGGACCCCGGACCTGCCCACGCTGCACGACAAGT...ACGCCAACGGCTGGGCATCAGAAAGGCCCAGAGAGTTGAAAGTGCCAAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| CDS-3UTR TCA 90 bp | GCCGCAGCACCATCTCTCCTCTTTCAGATAGTGGCACATTGGAAACCCCCAGTTTGGCCAGGGCGCCCCTaGGGAAGCTCAGCAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AAAPSLLFQIVAHWKPPVWPGRP*GSSASP Trigger: AGGGCTTGCTGAGCTTCCTCAGGGGCGCCCTGGCCA...AACTGGGGGTTTCCAATGTGCCACTATCTGAAAGAGGAGAGATGGTGCTGCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | TGGGCCTTTCTGATGCCCAGCCGTTGGCGTCTGCTCTaGAGTGAGGGTGATACAGGCTCCAATGCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: WAFLMPSRWRLL*SEGDTGSNASS Trigger: TGAAGAAGCATTGGAGCCTGTATCACCCTCACTCAAGAGCAGACGCCAACGGCTGGGCATCAGAAAGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | CTGCAACCCGCTGCAATGCCAAACATGCTGACATTCTaGCATTACGGCCGCAGCACCATCTCTCCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LQPAAMPNMLTF*HYGRSTISPLS Trigger: TGAAAGAGGAGAGATGGTGCTGCGGCCGTAATGCAAGAATGTCAGCATGTTTGGCATTGCAGCGGGTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| CDS-3UTR TCA 90 bp | CGTCAATTATCTGCTTTAAGCCACAGTAATCAGCAATACTGCAGATTAGCTCTGTGGCCAGGGCGCCCCTaGGGAAGCTCAGCAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RQLSALSHSNQQYCRLALWPGRP*GSSASP Trigger: AGGGCTTGCTGAGCTTCCTCAGGGGCGCCCTGGCCA...CAGAGCTAATCTGCAGTATTGCTGATTACTGTGGCTTAAAGCAGATAATTGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS-3UTR GCA 90 bp | CACAGTAATCAGCAATACTGCAGATTAGCTCTGACATTGCCTGAACCTCATGAGCCCTGTAACTTGTCGTaGAGCGTGGGCAGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: HSNQQYCRLALTLPEPHEPCNLS*SVGRSG Trigger: CCCGGACCTGCCCACGCTGCACGACAAGTTACAGGG...CTCATGAGGTTCAGGCAATGTCAGAGCTAATCTGCAGTATTGCTGATTACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS-3UTR CCA 90 bp | CGTCAATTATCTGCTTTAAGCCACAGTAATCAGCAATACTGCAGATTAGCTCTGACTTGTCGTGCAGCGTaGGCAGGTCCGGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQLSALSHSNQQYCRLALTCRAA*AGPGSW Trigger: CCAGGACCCCGGACCTGCCCACGCTGCACGACAAGT...CAGAGCTAATCTGCAGTATTGCTGATTACTGTGGCTTAAAGCAGATAATTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | CAACAACCCACACTGCAAACTGCCTTGACTTCAGCCTaGGATGTAAATATCCGCAGAGTACTGGGTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QQPTLQTALTSA*DVNIRRVLGAR Trigger: CCTTGCACCCAGTACTCTGCGGATATTTACATCCAAGGCTGAAGTCAAGGCAGTTTGCAGTGTGGGTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| CDS-3UTR GCA 90 bp | ACAAAAAGGAGCTTAGATAGCCTTTACCAGAACCCACGTCAATTATCTGCTTTACCCTGTAACTTGTCGTaGAGCGTGGGCAGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TKRSLDSLYQNPRQLSALPCNLS*SVGRSG Trigger: CCCGGACCTGCCCACGCTGCACGACAAGTTACAGGG...TAAAGCAGATAATTGACGTGGGTTCTGGTAAAGGCTATCTAAGCTCCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | GAGTGCACAGTCCCAAGTTTTGCACAGAATAGTGCTTaGCAGTTCGGGCAAAAGCTTCCACACTCAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: ECTVPSFAQNSA*QFGQKLPHSTA Trigger: AGCTGTTGAGTGTGGAAGCTTTTGCCCGAACTGCAAAGCACTATTCTGTGCAAAACTTGGGACTGTGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | CTTCACATTTTCATCAACTCTCTGCCTTTTATTTCCTaGGAGGGCTGTGAGCAACTGCTCAGAAGGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LHIFINSLPFIS*EGCEQLLRRSA Trigger: TGCACTCCTTCTGAGCAGTTGCTCACAGCCCTCCAAGGAAATAAAAGGCAGAGAGTTGATGAAAATGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS-3UTR TCA 90 bp | CAAGGTCACCACAGGTATGCAGTCCCACCATTAAACAGTCCTCCAGATCTTCAATTAAAATTTGGTCTTTaGGCTTTCCAGGAGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: QGHHRYAVPPLNSPPDLQLKFGL*AFQEQQ Trigger: TTGTTGCTCCTGGAAAGCTCAAAGACCAAATTTTAA...TTGAAGATCTGGAGGACTGTTTAATGGTGGGACTGCATACCTGTGGTGACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| 3UTR CAA 72 bp | TCAATCTCTGCAACATTTCCAACAGTTCGTTTGCATTaGTTATTTAAACTCTCAGCCTCCACAAAACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SISATFPTVRLH*LFKLSASTKPG Trigger: ACCAGGTTTTGTGGAGGCTGAGAGTTTAAATAACAAATGCAAACGAACTGTTGGAAATGTTGCAGAGATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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| CDS GCA 90 bp | GCCAGGGCGCCCCTGAGGAAGCTCAGCAAGCCCTGTAACTTGTCGTaGAGCGTGGGCAGGTCCGGGGTCCTGGGCAGAGGGCAGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ARAPLRKLSKPCNLS*SVGRSGVLGRGQAA Trigger: GGCGGCCTGCCCTCTGCCCAGGACCCCGGACCTGCCCACGCTGCACGACAAGTTACAGGGCTTGCTGAGCTTCCTCAGGGGCGCCCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046638.10 ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS CCA 90 bp | GCACGCTCTCAGGGGGCAGGTCGACCAGCTCCTGCCAGACCGACTTaGTGTAGAAGTCCACCGTGTGCGCGCTGGAAATGGCCAGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: ARSQGAGRPAPARPT*CRSPPCARWKWPGR Trigger: GCGCCCTGGCCATTTCCAGCGCGCACACGGTGGACTTCTACACCAAGTCGGTCTGGCAGGAGCTGGTCGACCTGCCCCCTGAGAGCGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046638.10 ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS CAA 72 bp | AGGGCGCCCCTGAGGAAGCTCAGCAAGCCCTGTAACTaGTCGTGCAGCGTGGGCAGGTCCGGGGTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RAPLRKLSKPCN*SCSVGRSGVLG Trigger: GCCCAGGACCCCGGACCTGCCCACGCTGCACGACAAGTTACAGGGCTTGCTGAGCTTCCTCAGGGGCGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046638.10 ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS TCA 72 bp | CCACCGTGTGCGCGCTGGAAATGGCCAGGGCGCCCCTaGGGAAGCTCAGCAAGCCCTGTAACTTGTCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PPCARWKWPGRP*GSSASPVTCRA Trigger: TGCACGACAAGTTACAGGGCTTGCTGAGCTTCCTCAGGGGCGCCCTGGCCATTTCCAGCGCGCACACGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046638.10 ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS CCA 72 bp | CAGGGGGCAGGTCGACCAGCTCCTGCCAGACCGACTTaGTGTAGAAGTCCACCGTGTGCGCGCTGGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: QGAGRPAPARPT*CRSPPCARWKW Trigger: CCATTTCCAGCGCGCACACGGTGGACTTCTACACCAAGTCGGTCTGGCAGGAGCTGGTCGACCTGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046638.10 ENSMUST00000176040.2 ENSMUST00000176924.8 |
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| CDS TCA 72 bp | GCTTTCCAGGAGCAACAACAGCAGAAGTCTTACATCTaGTCCCGTCTCTGCCTCGCGCGGCTCGGCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AFQEQQQQKSYI*SRLCLARLGLH Trigger: GTGGAGGCCGAGCCGCGCGAGGCAGAGACGGGATCAGATGTAAGACTTCTGCTGTTGTTGCTCCTGGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176924.8 |
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