RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045555

Ensembl transcript IDs: ENSMUST00000058747.4

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACCCCCACTCTGTCCAAGGCTAAGAAGGCGAAGGTCTTAGTCTaGGCAAGTGAAGGTATTCACCCATGTCACTGTCACTCGCCAAGC +
Preference number: 1 (lower is better)
Translates to: HTPTLSKAKKAKVLV*ASEGIHPCHCHSPS
Trigger: GCTTGGCGAGTGACAGTGACATGGGTGAATACCTTCACTTGCCCAGACTAAGACCTTCGCCTTCTTAGCCTTGGACAGAGTGGGGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
3UTR-3UTR GCA 90 bp GTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCCAATCACCCAAGCCCTaGTTCAAGCAAGTGACAAGC +
Preference number: 2 (lower is better)
Translates to: VTVTRQAQGQAQGFITYFQSPKP*FKQVTS
Trigger: GCTTGTCACTTGCTTGAAGCAGGGCTTGGGTGATTG...GAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
3UTR TCA 72 bp TCAGGAGACAATCACCCAAGCCCTGCTTCAAGCAAGTaGCAAGCCGGGGGAGACTGGAGACGTAACTCCATG +
Preference number: 3 (lower is better)
Translates to: SGDNHPSPASSK*QAGGDWRRNSM
Trigger: CATGGAGTTACGTCTCCAGTCTCCCCCGGCTTGTCACTTGCTTGAAGCAGGGCTTGGGTGATTGTCTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
3UTR GCA 72 bp TTCATTACGTACTTCAGGAGACAATCACCCAAGCCCTaGTTCAAGCAAGTGACAAGCCGGGGGAGACTGGAG +
Preference number: 3 (lower is better)
Translates to: FITYFRRQSPKP*FKQVTSRGRLE
Trigger: CTCCAGTCTCCCCCGGCTTGTCACTTGCTTGAAGCAGGGCTTGGGTGATTGTCTCCTGAAGTACGTAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
3UTR CCA 72 bp ACTCTGTCCAAGGCTAAGAAGGCGAAGGTCTTAGTCTaGGCAAGTGAAGGTATTCACCCATGTCACTGTCAC +
Preference number: 3 (lower is better)
Translates to: TLSKAKKAKVLV*ASEGIHPCHCH
Trigger: GTGACAGTGACATGGGTGAATACCTTCACTTGCCCAGACTAAGACCTTCGCCTTCTTAGCCTTGGACAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp GGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTGCACTCGGCGCCCACTaGGCACGTAGGTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GIHPCHCHSPSSRPSSRLALGAH*ARRSPA
Trigger: GGCAGGTGACCTACGTGCGCAGTGGGCGCCGAGTGC...AAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp GTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCTCACCTGCCTCCTTCTaGCTCCGCGTGGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VTVTRQAQGQAQGFITYFSPASF*LRVGSR
Trigger: CCGGCTCCCCACGCGGAGCCAGAAGGAGGCAGGTGA...GAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp AGGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTGCAGCCACGGCTGGATaGGGATCCCGCCAATCGATG +
Preference number: 4 (lower is better)
Translates to: RYSPMSLSLAKLKAKLKAAATAG*GSRQSM
Trigger: CATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGC...AGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp GGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCTGAGCAGCCACGGCTaGATGCGGATCCCGCCAATC +
Preference number: 4 (lower is better)
Translates to: GIHPCHCHSPSSRPSSRLLSSHG*MRIPPI
Trigger: GATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAG...AAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp AGGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTGGACCGAGAAGGGCCTaGCCATGGCTGGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: RYSPMSLSLAKLKAKLKAGPRRA*PWLELY
Trigger: ATAGAGCTCCAGCCATGGGCAGGCCCTTCTCGGTCC...AGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp GTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCGGGCCTGCCCATGGCTaGAGCTCTATGTGCCATCGG +
Preference number: 4 (lower is better)
Translates to: VTVTRQAQGQAQGFITYFGPAHG*SSMCHR
Trigger: CCGATGGCACATAGAGCTCCAGCCATGGGCAGGCCC...GAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp GGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTAGAGGCGGCACCGCTTaGTGCGGATTTGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: GIHPCHCHSPSSRPSSRLRGGTA*CGFDEL
Trigger: TAGCTCATCAAATCCGCAGCAAGCGGTGCCGCCTCT...AAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp CACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACACGAGCTGGCCGATCTaGTCAAGAACATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPCHCHSPSSRPSSRLHYTSWPI*SRTSSR
Trigger: TCTGGAGGATGTTCTTGAGCAGATCGGCCAGCTCGT...GTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR TCA 90 bp CTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAAGCGTAGCTCAGGAACCTTaGGGCCTCTTCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LKAKLKASLRTSGDNHPSVAQEP*GLFIQG
Trigger: TCCCTGGATGAAGAGGCCTCAAGGTTCCTGAGCTAC...GCTTGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp AAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAGGCGGCACCGCTTGCTaGGGATTTGATGAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: KLKAKLKASLRTSGDNHPGGTAC*GFDELS
Trigger: GCTTAGCTCATCAAATCCGCAGCAAGCGGTGCCGCC...TGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp GTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCTGCTTCCCAGTTTTCTaGTGTTGCCGTGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTVTRQAQGQAQGFITYFCFPVF*CCRAAS
Trigger: AGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCA...GAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR TCA 90 bp GCGAAGGTCTTAGTCTGGGCAAGTGAAGGTATTCACCCATGTCACTGTCACTCGCTCCAGAACATGGGCTaGCTTGACACTCGGATCAAA +
Preference number: 4 (lower is better)
Translates to: AKVLVWASEGIHPCHCHSLQNMG*LDTRIK
Trigger: TTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAG...CGAGTGACAGTGACATGGGTGAATACCTTCACTTGCCCAGACTAAGACCTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp CACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACCTCGGATCAAAACGATaGACTTCACATCCACCGTTG +
Preference number: 4 (lower is better)
Translates to: HPCHCHSPSSRPSSRLHYLGSKR*TSHPPL
Trigger: CAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAG...GTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp AAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAGATCCCGCCAATCGATaGACAAGCGGTGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: KLKAKLKASLRTSGDNHPDPANR*TSGDAR
Trigger: TCTGGCATCACCGCTTGTCCATCGATTGGCGGGATC...TGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR TCA 90 bp GCGAAGGTCTTAGTCTGGGCAAGTGAAGGTATTCACCCATGTCACTGTCACTCGGAACATGGGCTGACTTaGCACTCGGATCAAAACGAT +
Preference number: 4 (lower is better)
Translates to: AKVLVWASEGIHPCHCHSEHGLT*HSDQND
Trigger: ATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTC...CGAGTGACAGTGACATGGGTGAATACCTTCACTTGCCCAGACTAAGACCTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp CAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCATCTCGAAGACGAGCTaGCCGATCTGCTCAAGAACA +
Preference number: 4 (lower is better)
Translates to: QAQGQAQGFITYFRRQSPISKTS*PICSRT
Trigger: TGTTCTTGAGCAGATCGGCCAGCTCGTCTTCGAGAT...GGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR TCA 90 bp AAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAAGCCCTTTTCCAGATCTGCCTTaGGAACGTCGATCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KAKLKASLRTSGDNHPSPFPDLP*ERRSCG
Trigger: ACCACAAGATCGACGTTCTCAAGGCAGATCTGGAAA...AGGGCTTGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR GCA 90 bp AAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAAGCCCTCGCACTTTCCAGATCTaGCTTGAGAACGTCGATCTT +
Preference number: 4 (lower is better)
Translates to: KAKLKASLRTSGDNHPSPRTFQI*LENVDL
Trigger: AAGATCGACGTTCTCAAGGCAGATCTGGAAAGTGCG...AGGGCTTGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CCA 90 bp AGGTATTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTAGAACGTCGATCTTGTaGTGCCCAAATTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: RYSPMSLSLAKLKAKLKARTSIL*CPNSFR
Trigger: TCTGAATGAATTTGGGCACCACAAGATCGACGTTCT...AGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp ACCCTTCCTGCGGAGAAGCCCGCCCTGGGCACAGCAGCTCGGCTCTaGGGACGTCGTGCTCCCGCCACCCCGGGGCAGCACTCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: TLPAEKPALGTAARL*GRRAPATPGQHSAP
Trigger: GGGCGCCGAGTGCTGCCCCGGGGTGGCGGGAGCACGACGTCCCCAGAGCCGAGCTGCTGTGCCCAGGGCGGGCTTCTCCGCAGGAAGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp GGTGGCCCTGGGGAATCGCCGCGGCCCGGGGGTCCCGAGCCCGCGTaGCGCAACTCCATGCAAAGCCGTAGGCCCAGAAGCAGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: GGPGESPRPGGPEPA*RNSMQSRRPRSSAA
Trigger: TGCCGCGCTGCTTCTGGGCCTACGGCTTTGCATGGAGTTGCGCCACGCGGGCTCGGGACCCCCGGGCCGCGGCGATTCCCCAGGGCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp GCAGCACTCGGCGCCCACTGCGCACGTAGGTCACCTGCCTCCTTCTaGCTCCGCGTGGGGAGCCGGGCGCCGACAGTAGGTGTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: AALGAHCARRSPASF*LRVGSRAPTVGVSG
Trigger: CCCGGACACACCTACTGTCGGCGCCCGGCTCCCCACGCGGAGCCAGAAGGAGGCAGGTGACCTACGTGCGCAGTGGGCGCCGAGTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp AGCTCTATGTGCCATCGGGAACCCTTCCTGCGGAGAAGCCCGCCCTaGGCACAGCAGCTCGGCTCTGGGGACGTCGTGCTCCCGCCACCC +
Preference number: 5 (lower is better)
Translates to: SSMCHREPFLRRSPP*AQQLGSGDVVLPPP
Trigger: GGGTGGCGGGAGCACGACGTCCCCAGAGCCGAGCTGCTGTGCCCAGGGCGGGCTTCTCCGCAGGAAGGGTTCCCGATGGCACATAGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp TCATCCAGGGACCGAGAAGGGCCTGCCCATGGCTGGAGCTCTATGTaGCATCGGGAACCCTTCCTGCGGAGAAGCCCGCCCTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: SSRDREGPAHGWSSM*HREPFLRRSPPWAQ
Trigger: CTGTGCCCAGGGCGGGCTTCTCCGCAGGAAGGGTTCCCGATGGCACATAGAGCTCCAGCCATGGGCAGGCCCTTCTCGGTCCCTGGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp GCGGCTTCTGAGCAGCCACGGCTGGATGCGGATCCCGCCAATCGATaGACAAGCGGTGATGCCAGAGGCCCTGCCGCTCCAGAACATGGG +
Preference number: 5 (lower is better)
Translates to: AASEQPRLDADPANR*TSGDARGPAAPEHG
Trigger: CCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 90 bp GCAGCCACGGCTGGATGCGGATCCCGCCAATCGATGGACAAGCGGTaGTGCCAGAGGCCCTGCCGCTCCAGAACATGGGCTGACTTGACA +
Preference number: 5 (lower is better)
Translates to: AATAGCGSRQSMDKR*CQRPCRSRTWADLT
Trigger: TGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp CTTGAGGCCTCTTCATCCAGGGACCGAGAAGGGCCTGCCCATGGCTaGAGCTCTATGTGCCATCGGGAACCCTTCCTGCGGAGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LEASSSRDREGPAHG*SSMCHREPFLRRSP
Trigger: CGGGCTTCTCCGCAGGAAGGGTTCCCGATGGCACATAGAGCTCCAGCCATGGGCAGGCCCTTCTCGGTCCCTGGATGAAGAGGCCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp TCCCAGTTTTCTGGTGTTGCCGTGCGGCTTCTGAGCAGCCACGGCTaGATGCGGATCCCGCCAATCGATGGACAAGCGGTGATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SQFSGVAVRLLSSHG*MRIPPIDGQAVMPE
Trigger: CTCTGGCATCACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 90 bp AGCGGTGATGCCAGAGGCCCTGCCGCTCCAGAACATGGGCTGACTTaGCACTCGGATCAAAACGATGCACTTCACATCCACCGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SGDARGPAAPEHGLT*HSDQNDALHIHRWP
Trigger: TGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp TGTGGTGCCCAAATTCATTCAGAATGCTTCCCAGTTTTCTGGTGTTaGCGTGCGGCTTCTGAGCAGCCACGGCTGGATGCGGATCCCGCC +
Preference number: 5 (lower is better)
Translates to: CGAQIHSECFPVFWC*RAASEQPRLDADPA
Trigger: GGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCATTCTGAATGAATTTGGGCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 90 bp GTGATCGCATGCAATCTGAGTGGTACTGATGTAGCTCAGGAACCTTaGGGCCTCTTCATCCAGGGACCGAGAAGGGCCTGCCCATGGCTG +
Preference number: 5 (lower is better)
Translates to: VIACNLSGTDVAQEP*GLFIQGPRRACPWL
Trigger: CAGCCATGGGCAGGCCCTTCTCGGTCCCTGGATGAAGAGGCCTCAAGGTTCCTGAGCTACATCAGTACCACTCAGATTGCATGCGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 90 bp GGACAAGCGGTGATGCCAGAGGCCCTGCCGCTCCAGAACATGGGCTaGCTTGACACTCGGATCAAAACGATGCACTTCACATCCACCGTT +
Preference number: 5 (lower is better)
Translates to: GQAVMPEALPLQNMG*LDTRIKTMHFTSTV
Trigger: AACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCACCGCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 90 bp TCATTCAGAATGCTTCCCAGTTTTCTGGTGTTGCCGTGCGGCTTCTaGGCAGCCACGGCTGGATGCGGATCCCGCCAATCGATGGACAAG +
Preference number: 5 (lower is better)
Translates to: SFRMLPSFLVLPCGF*AATAGCGSRQSMDK
Trigger: CTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCATTCTGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 90 bp CGATCTTGTGGTGCCCAAATTCATTCAGAATGCTTCCCAGTTTTCTaGTGTTGCCGTGCGGCTTCTGAGCAGCCACGGCTGGATGCGGAT +
Preference number: 5 (lower is better)
Translates to: RSCGAQIHSECFPVF*CCRAASEQPRLDAD
Trigger: ATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCATTCTGAATGAATTTGGGCACCACAAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CAA 90 bp CACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACTGTAGCTCAGGAACCTaGAGGCCTCTTCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: HPCHCHSPSSRPSSRLHYCSSGT*RPLHPG
Trigger: CCCTGGATGAAGAGGCCTCAAGGTTCCTGAGCTACA...GTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp TGTCATCACTCCCCAGCCCTAAAGAGTAGAGGCGGCACCGCTTGCTaGGGATTTGATGAGCTAAGCCAAACCTGTCATCAAGACACACCA +
Preference number: 5 (lower is better)
Translates to: CHHSPALKSRGGTAC*GFDELSQTCHQDTP
Trigger: TGGTGTGTCTTGATGACAGGTTTGGCTTAGCTCATCAAATCCGCAGCAAGCGGTGCCGCCTCTACTCTTTAGGGCTGGGGAGTGATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp GTGTGTCATCACTCCCCAGCCCTAAAGAGTAGAGGCGGCACCGCTTaGTGCGGATTTGATGAGCTAAGCCAAACCTGTCATCAAGACACA +
Preference number: 5 (lower is better)
Translates to: VCHHSPALKSRGGTA*CGFDELSQTCHQDT
Trigger: TGTGTCTTGATGACAGGTTTGGCTTAGCTCATCAAATCCGCAGCAAGCGGTGCCGCCTCTACTCTTTAGGGCTGGGGAGTGATGACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp TGCCGCTCCAGAACATGGGCTGACTTGACACTCGGATCAAAACGATaGACTTCACATCCACCGTTGGCCATGCTCACCTCAAAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CRSRTWADLTLGSKR*TSHPPLAMLTSKCV
Trigger: CACACACTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CAA 90 bp TTCACCCATGTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACTTCACATCCACCGTaGGCCATGCTCACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: FTHVTVTRQAQGQAQGFITSHPP*AMLTSK
Trigger: CTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGT...AATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGACATGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CAA 90 bp GTCACTGTCACTCGCCAAGCTCAAGGCCAAGCTCAAGGCTTCATTACGTACTTCCTTTCCAGATCTGCCTaGAGAACGTCGATCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VTVTRQAQGQAQGFITYFLSRSA*RTSILW
Trigger: CCACAAGATCGACGTTCTCAAGGCAGATCTGGAAAG...GAAGTACGTAATGAAGCCTTGAGCTTGGCCTTGAGCTTGGCGAGTGACAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS-3UTR CAA 90 bp AAGGCCAAGCTCAAGGCTTCATTACGTACTTCAGGAGACAATCACCCAAGCCCTAGAACATGGGCTGACTaGACACTCGGATCAAAACGA +
Preference number: 5 (lower is better)
Translates to: KAKLKASLRTSGDNHPSPRTWAD*TLGSKR
Trigger: TCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCT...AGGGCTTGGGTGATTGTCTCCTGAAGTACGTAATGAAGCCTTGAGCTTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 90 bp CAGAATAAGGTTTTCCAGAACTTTCCACTCCGCACTTTCCAGATCTaGCTTGAGAACGTCGATCTTGTGGTGCCCAAATTCATTCAGAAT +
Preference number: 5 (lower is better)
Translates to: QNKVFQNFPLRTFQI*LENVDLVVPKFIQN
Trigger: ATTCTGAATGAATTTGGGCACCACAAGATCGACGTTCTCAAGGCAGATCTGGAAAGTGCGGAGTGGAAAGTTCTGGAAAACCTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp GCGGAGAAGCCCGCCCTGGGCACAGCAGCTCGGCTCTaGGGACGTCGTGCTCCCGCCACCCCGGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: AEKPALGTAARL*GRRAPATPGQH
Trigger: GTGCTGCCCCGGGGTGGCGGGAGCACGACGTCCCCAGAGCCGAGCTGCTGTGCCCAGGGCGGGCTTCTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp GGCCCGGGGGTCCCGAGCCCGCGTGGCGCAACTCCATaGAAAGCCGTAGGCCCAGAAGCAGCGCGGCACCGA +
Preference number: 6 (lower is better)
Translates to: GPGVPSPRGATP*KAVGPEAARHR
Trigger: TCGGTGCCGCGCTGCTTCTGGGCCTACGGCTTTGCATGGAGTTGCGCCACGCGGGCTCGGGACCCCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp GGCGCCCACTGCGCACGTAGGTCACCTGCCTCCTTCTaGCTCCGCGTGGGGAGCCGGGCGCCGACAGTAGGT +
Preference number: 6 (lower is better)
Translates to: GAHCARRSPASF*LRVGSRAPTVG
Trigger: ACCTACTGTCGGCGCCCGGCTCCCCACGCGGAGCCAGAAGGAGGCAGGTGACCTACGTGCGCAGTGGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp TGCCATCGGGAACCCTTCCTGCGGAGAAGCCCGCCCTaGGCACAGCAGCTCGGCTCTGGGGACGTCGTGCTC +
Preference number: 6 (lower is better)
Translates to: CHREPFLRRSPP*AQQLGSGDVVL
Trigger: GAGCACGACGTCCCCAGAGCCGAGCTGCTGTGCCCAGGGCGGGCTTCTCCGCAGGAAGGGTTCCCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp GAGCAGCCACGGCTGGATGCGGATCCCGCCAATCGATaGACAAGCGGTGATGCCAGAGGCCCTGCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: EQPRLDADPANR*TSGDARGPAAP
Trigger: TGGAGCGGCAGGGCCTCTGGCATCACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp GCTGGATGCGGATCCCGCCAATCGATGGACAAGCGGTaGTGCCAGAGGCCCTGCCGCTCCAGAACATGGGCT +
Preference number: 6 (lower is better)
Translates to: AGCGSRQSMDKR*CQRPCRSRTWA
Trigger: AGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp TCTGGTGTTGCCGTGCGGCTTCTGAGCAGCCACGGCTaGATGCGGATCCCGCCAATCGATGGACAAGCGGTG +
Preference number: 6 (lower is better)
Translates to: SGVAVRLLSSHG*MRIPPIDGQAV
Trigger: CACCGCTTGTCCATCGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp TCTTCATCCAGGGACCGAGAAGGGCCTGCCCATGGCTaGAGCTCTATGTGCCATCGGGAACCCTTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: SSSRDREGPAHG*SSMCHREPFLR
Trigger: CCGCAGGAAGGGTTCCCGATGGCACATAGAGCTCCAGCCATGGGCAGGCCCTTCTCGGTCCCTGGATGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp ATGCTTCCCAGTTTTCTGGTGTTGCCGTGCGGCTTCTaGGCAGCCACGGCTGGATGCGGATCCCGCCAATCG +
Preference number: 6 (lower is better)
Translates to: MLPSFLVLPCGF*AATAGCGSRQS
Trigger: CGATTGGCGGGATCCGCATCCAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp GCCAGAGGCCCTGCCGCTCCAGAACATGGGCTGACTTaGCACTCGGATCAAAACGATGCACTTCACATCCAC +
Preference number: 6 (lower is better)
Translates to: ARGPAAPEHGLT*HSDQNDALHIH
Trigger: GTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp AAACCTGTCATCAAGACACACCAGCCAGGGCTTCGGTaGAGGGCTGGAGTCAGTAGCCAAGCTGTCTGTACC +
Preference number: 6 (lower is better)
Translates to: KPVIKTHQPGLR*RAGVSSQAVCT
Trigger: GGTACAGACAGCTTGGCTACTGACTCCAGCCCTGCACCGAAGCCCTGGCTGGTGTGTCTTGATGACAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp TGCAATCTGAGTGGTACTGATGTAGCTCAGGAACCTTaGGGCCTCTTCATCCAGGGACCGAGAAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: CNLSGTDVAQEP*GLFIQGPRRAC
Trigger: GCAGGCCCTTCTCGGTCCCTGGATGAAGAGGCCTCAAGGTTCCTGAGCTACATCAGTACCACTCAGATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp GTGATGCCAGAGGCCCTGCCGCTCCAGAACATGGGCTaGCTTGACACTCGGATCAAAACGATGCACTTCACA +
Preference number: 6 (lower is better)
Translates to: VMPEALPLQNMG*LDTRIKTMHFT
Trigger: TGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp CACTCCCCAGCCCTAAAGAGTAGAGGCGGCACCGCTTaGTGCGGATTTGATGAGCTAAGCCAAACCTGTCAT +
Preference number: 6 (lower is better)
Translates to: HSPALKSRGGTA*CGFDELSQTCH
Trigger: ATGACAGGTTTGGCTTAGCTCATCAAATCCGCAGCAAGCGGTGCCGCCTCTACTCTTTAGGGCTGGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp GGTGCCCAAATTCATTCAGAATGCTTCCCAGTTTTCTaGTGTTGCCGTGCGGCTTCTGAGCAGCCACGGCTG +
Preference number: 6 (lower is better)
Translates to: GAQIHSECFPVF*CCRAASEQPRL
Trigger: CAGCCGTGGCTGCTCAGAAGCCGCACGGCAACACCAGAAAACTGGGAAGCATTCTGAATGAATTTGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CAA 72 bp TGCCAGAGGCCCTGCCGCTCCAGAACATGGGCTGACTaGACACTCGGATCAAAACGATGCACTTCACATCCA +
Preference number: 6 (lower is better)
Translates to: CQRPCRSRTWAD*TLGSKRCTSHP
Trigger: TGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCTGGAGCGGCAGGGCCTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp TCCCCAGCCCTAAAGAGTAGAGGCGGCACCGCTTGCTaGGGATTTGATGAGCTAAGCCAAACCTGTCATCAA +
Preference number: 6 (lower is better)
Translates to: SPALKSRGGTAC*GFDELSQTCHQ
Trigger: TTGATGACAGGTTTGGCTTAGCTCATCAAATCCGCAGCAAGCGGTGCCGCCTCTACTCTTTAGGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CAA 90 bp GCTGACTTGACACTCGGATCAAAACGATGCACTTCACATCCACCGTaGGCCATGCTCACCTCAAAGTGTGTGTCATCACTCCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: ADLTLGSKRCTSHPP*AMLTSKCVSSLPSP
Trigger: AGGGCTGGGGAGTGATGACACACACTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp GATCAAAACGATGCACTTCACATCCACCGTTGGCCATaGTCACCTCAAAGTGTGTGTCATCACTCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: DQNDALHIHRWP*SPQSVCHHSPA
Trigger: GGCTGGGGAGTGATGACACACACTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS GCA 72 bp AGAACATGGGCTGACTTGACACTCGGATCAAAACGATaGACTTCACATCCACCGTTGGCCATGCTCACCTCA +
Preference number: 6 (lower is better)
Translates to: RTWADLTLGSKR*TSHPPLAMLTS
Trigger: TGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGTCAAGTCAGCCCATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CCA 72 bp CACTCGGATCAAAACGATGCACTTCACATCCACCGTTaGCCATGCTCACCTCAAAGTGTGTGTCATCACTCC +
Preference number: 6 (lower is better)
Translates to: HSDQNDALHIHR*PCSPQSVCHHS
Trigger: GGAGTGATGACACACACTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CAA 72 bp ACACTCGGATCAAAACGATGCACTTCACATCCACCGTaGGCCATGCTCACCTCAAAGTGTGTGTCATCACTC +
Preference number: 6 (lower is better)
Translates to: TLGSKRCTSHPP*AMLTSKCVSSL
Trigger: GAGTGATGACACACACTTTGAGGTGAGCATGGCCAACGGTGGATGTGAAGTGCATCGTTTTGATCCGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS TCA 72 bp CCAGAACTTTCCACTCCGCACTTTCCAGATCTGCCTTaGGAACGTCGATCTTGTGGTGCCCAAATTCATTCA +
Preference number: 6 (lower is better)
Translates to: PELSTPHFPDLP*ERRSCGAQIHS
Trigger: TGAATGAATTTGGGCACCACAAGATCGACGTTCTCAAGGCAGATCTGGAAAGTGCGGAGTGGAAAGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4
CDS CAA 72 bp TCCAGAACTTTCCACTCCGCACTTTCCAGATCTGCCTaGAGAACGTCGATCTTGTGGTGCCCAAATTCATTC +
Preference number: 6 (lower is better)
Translates to: SRTFHSALSRSA*RTSILWCPNSF
Trigger: GAATGAATTTGGGCACCACAAGATCGACGTTCTCAAGGCAGATCTGGAAAGTGCGGAGTGGAAAGTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058747.4