Pregenerated sensors for METTL23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090266Ensembl transcript IDs: ENSMUST00000106370.10, ENSMUST00000132593.8, ENSMUST00000140869.2, ENSMUST00000143184.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCGCCAACCTCTAAGACAGCTTTGCCTGGTAGAGATCTTCTGTaGAACCACAGGTATTGGGCCAGGACTACAGCACAGGGCCAAACA | + |
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Preference number: 1 (lower is better) Translates to: PAPTSKTALPGRDLL*NHRYWARTTAQGQT Trigger: TGTTTGGCCCTGTGCTGTAGTCCTGGCCCAATACCTGTGGTTTCACAGAAGATCTCTACCAGGCAAAGCTGTCTTAGAGGTTGGCGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR GCA 90 bp | GCCAGGACTACAGCACAGGGCCAAACATACATTCCATACTGGACATaGAGGACCAGATGGAAGATTCAGCAGTTCAAAGCTTCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: ARTTAQGQTYIPYWT*RTRWKIQQFKASHS Trigger: AGAGTGGGAAGCTTTGAACTGCTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTAGTCCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132593.8 ENSMUST00000140869.2 |
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| 3UTR CCA 90 bp | TATTGGGCCAGGACTACAGCACAGGGCCAAACATACATTCCATACTaGACATGCAGGACCAGATGGAAGATTCAGCAGTTCAAAGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: YWARTTAQGQTYIPY*TCRTRWKIQQFKAS Trigger: GGAAGCTTTGAACTGCTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTAGTCCTGGCCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132593.8 ENSMUST00000140869.2 |
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| 3UTR GCA 90 bp | CTACAACTTCGACCTGTGGCAGGTTATTCATCTGGCAACTTTGCCTaGAGATATCCAGACAGTGAGGAAACTCTGAGCTGTCAGATAGTA | + |
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Preference number: 1 (lower is better) Translates to: LQLRPVAGYSSGNFA*RYPDSEETLSCQIV Trigger: TACTATCTGACAGCTCAGAGTTTCCTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAATAACCTGCCACAGGTCGAAGTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR CCA 90 bp | GCACAGGGCCAAACATACATTCCATACTGGACATGCAGGACCAGATaGAAGATTCAGCAGTTCAAAGCTTCCCACTCTTCATTTTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: AQGQTYIPYWTCRTR*KIQQFKASHSSFSR Trigger: TCTCGAAAATGAAGAGTGGGAAGCTTTGAACTGCTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132593.8 ENSMUST00000140869.2 |
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| 3UTR TCA 90 bp | GGCAGGTTATTCATCTGGCAACTTTGCCTGCAGATATCCAGACAGTaGGGAAACTCTGAGCTGTCAGATAGTATTACTTTAGCACCACAT | + |
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Preference number: 1 (lower is better) Translates to: GRLFIWQLCLQISRQ*GNSELSDSITLAPH Trigger: ATGTGGTGCTAAAGTAATACTATCTGACAGCTCAGAGTTTCCTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAATAACCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR TCA 90 bp | AGGAAGGAGTACAGATTCCAACTCACCGCCACATTTCCACAAGTCTaGAAGGCGGTGAACATAAACATAAAGGCAACTCCTAAAATAACG | + |
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Preference number: 1 (lower is better) Translates to: RKEYRFQLTATFPQV*KAVNINIKATPKIT Trigger: CGTTATTTTAGGAGTTGCCTTTATGTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGTGGCGGTGAGTTGGAATCTGTACTCCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| 3UTR TCA 90 bp | CAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCATTaGGTTTCCTCAGATAATTCAGCTTTATGCCAGGTTATTCCATTT | + |
|
Preference number: 1 (lower is better) Translates to: QHSHKAYRIDHLHTH*VSSDNSALCQVIPF Trigger: AAATGGAATAACCTGGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| 3UTR-3UTR CCA 90 bp | TACAACTTCGACCTGTGGCAGGTTATTCATCTGGCAACTTTGCCTGCAGATATCACATGCAGGACCAGATaGAAGATTCAGCAGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: YNFDLWQVIHLATLPADITCRTR*KIQQFK Trigger: TTTGAACTGCTGAATCTTCCATCTGGTCCTGCATGT...GATATCTGCAGGCAAAGTTGCCAGATGAATAACCTGCCACAGGTCGAAGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCCAGGTTATTCCATTTTaGCACTGTCCCAGAACATAT | + |
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Preference number: 2 (lower is better) Translates to: CYPRHDSTATRLTELIIFQVIPF*HCPRTY Trigger: ATATGTTCTGGGACAGTGTCAAAATGGAATAACCTG...GAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| 3UTR CAA 90 bp | GAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATaGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ECYPRHDSTATRLTE*IIFIPIEFPQIIQL Trigger: AAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| 3UTR GCA 72 bp | GAAGGCTCACTCCAGCGCCAACCTCTAAGACAGCTTTaGCTGGTAGAGATCTTCTGTGAAACCACAGGTATT | + |
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Preference number: 3 (lower is better) Translates to: EGSLQRQPLRQL*LVEIFCETTGI Trigger: AATACCTGTGGTTTCACAGAAGATCTCTACCAGGCAAAGCTGTCTTAGAGGTTGGCGCTGGAGTGAGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR GCA 72 bp | CGACCTGTGGCAGGTTATTCATCTGGCAACTTTGCCTaGAGATATCCAGACAGTGAGGAAACTCTGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RPVAGYSSGNFA*RYPDSEETLSC Trigger: ACAGCTCAGAGTTTCCTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAATAACCTGCCACAGGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR CCA 72 bp | AGGACTACAGCACAGGGCCAAACATACATTCCATACTaGACATGCAGGACCAGATGGAAGATTCAGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RTTAQGQTYIPY*TCRTRWKIQQF Trigger: GAACTGCTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132593.8 ENSMUST00000140869.2 |
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| 3UTR CCA 72 bp | GGCGTGGTAGCGGACATAAACGTTTATTGTCACAGCTaGAATGCATTCAGACGGGCATTCAAAGGAAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: GVVADINVYCHS*NAFRRAFKGRS Trigger: ACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTACCACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| 3UTR GCA 72 bp | ACAGCACAGGGCCAAACATACATTCCATACTGGACATaGAGGACCAGATGGAAGATTCAGCAGTTCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: TAQGQTYIPYWT*RTRWKIQQFKA Trigger: AGCTTTGAACTGCTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132593.8 ENSMUST00000140869.2 |
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| 3UTR GCA 72 bp | GGTAGCGGACATAAACGTTTATTGTCACAGCTGGAATaGATTCAGACGGGCATTCAAAGGAAGGAGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: GSGHKRLLSQLE*IQTGIQRKEYR Trigger: TCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| 3UTR-3UTR CAA 90 bp | GAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCCCAGGTTATTCCATTTaGACACTGTCCCAGAACATA | + |
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Preference number: 3 (lower is better) Translates to: ECYPRHDSTATRLTELIIPGYSI*TLSQNI Trigger: TATGTTCTGGGACAGTGTCAAAATGGAATAACCTGG...GATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| 3UTR TCA 72 bp | TACAGATTCCAACTCACCGCCACATTTCCACAAGTCTaGAAGGCGGTGAACATAAACATAAAGGCAACTCCT | + |
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Preference number: 3 (lower is better) Translates to: YRFQLTATFPQV*KAVNINIKATP Trigger: AGGAGTTGCCTTTATGTTTATGTTCACCGCCTTTCAGACTTGTGGAAATGTGGCGGTGAGTTGGAATCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| 3UTR TCA 72 bp | TTCATCTGGCAACTTTGCCTGCAGATATCCAGACAGTaGGGAAACTCTGAGCTGTCAGATAGTATTACTTTA | + |
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Preference number: 3 (lower is better) Translates to: FIWQLCLQISRQ*GNSELSDSITL Trigger: TAAAGTAATACTATCTGACAGCTCAGAGTTTCCTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| 3UTR TCA 72 bp | CACAAGGCTTACAGAATTGATCATCTTCATACCCATTaGGTTTCCTCAGATAATTCAGCTTTATGCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: HKAYRIDHLHTH*VSSDNSALCQV Trigger: AACCTGGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGAAGGCTCACTCCAGCGCCAACCTCTAAGACAGCTTTGCCTGGTAGAGGCCTCAAACTCCAGTaGTCCTCTTGCCTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IPGRLTPAPTSKTALPGRGLKLQ*SSCLCL Trigger: AAGGCAGAGGCAAGAGGATCACTGGAGTTTGAGGCC...TCTACCAGGCAAAGCTGTCTTAGAGGTTGGCGCTGGAGTGAGCCTTCCTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGTTCAAAGCTTCCCACTCTTCATTTTCGAGAGGAAGTCACTGTGTTGTGCTTGCCTCTGCCTTTTaGATGCTGCGGGACGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QQFKASHSSFSRGSHCVVLASAF*MLRDAD Trigger: GTCCGCGTCCCGCAGCATTCAAAAGGCAGAGGCAAG...CACAACACAGTGACTTCCTCTCGAAAATGAAGAGTGGGAAGCTTTGAACTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS-3UTR GCA 90 bp | CAAAGCTTCCCACTCTTCATTTTCGAGAGGAAGTCACTGTGTTGTGACTGTGCACTGCCTTTTGAATGCTaGGGGACGCGGACCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QSFPLFIFERKSLCCDCALPFEC*GTRTSS Trigger: GCTGGAGGTCCGCGTCCCGCAGCATTCAAAAGGCAG...TGCACAGTCACAACACAGTGACTTCCTCTCGAAAATGAAGAGTGGGAAGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| 3UTR CAA 72 bp | TCTGAGCTGTCAGATAGTATTACTTTAGCACCACATTaGGCAGCCAAAATCCCAGGAAGGCTCACTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SELSDSITLAPH*AAKIPGRLTPA Trigger: CGCTGGAGTGAGCCTTCCTGGGATTTTGGCTGCCAAATGTGGTGCTAAAGTAATACTATCTGACAGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS-3UTR TCA 90 bp | TGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCGGTAGAGATCTTCTGTaGAACCACAGGTATTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CYPRHDSTATRLTELIIFGRDLL*NHRYWA Trigger: GGCCCAATACCTGTGGTTTCACAGAAGATCTCTACC...GAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | TGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCACATACATTCCATACTaGACATGCAGGACCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: CYPRHDSTATRLTELIIFTYIPY*TCRTCG Trigger: CCCGCAGGTCCTGCATGTCCAGTATGGAATGTATGT...GAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR GCA 90 bp | GTGGTAGCGGACATAAACGTTTATTGTCACAGCTGGAATGCATTCAGACGGGCATTCATCTGGCAACTTTaGCTGCAGATATCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: VVADINVYCHSWNAFRRAFIWQL*LQISRQ Trigger: CTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAA...TGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTATGTTGAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGTCTGGCAACTTTGCCTaGAGATATCCAGACAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KVMLNAILGMTAQPQGLQSGNFA*RYPDSE Trigger: CTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGA...CTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTCAACATAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AGCTGGAATGCATTCAGACGGGCATTCAAAGGAAGGAGTACAGATTCCAACTCAATGTCCTTTGATATGTaGCCCCATGTCAGTCCTACA | + |
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Preference number: 4 (lower is better) Translates to: SWNAFRRAFKGRSTDSNSMSFDM*PHVSPT Trigger: TGTAGGACTGACATGGGGCCACATATCAAAGGACAT...TGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR TCA 90 bp | GGACATAAACGTTTATTGTCACAGCTGGAATGCATTCAGACGGGCATTCAAAGGCATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GHKRLLSQLECIQTGIQRHQIQE*CLVVAK Trigger: CTTTGCCACCACAAGACATCATTCTTGGATCTGATG...CCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR GCA 90 bp | CATAAACGTTTATTGTCACAGCTGGAATGCATTCAGACGGGCATTCAAAGGAAGTCTGGCAACTTTGCCTaGAGATATCCAGACAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HKRLLSQLECIQTGIQRKSGNFA*RYPDSE Trigger: CTCACTGTCTGGATATCTGCAGGCAAAGTTGCCAGA...CTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTATGTTGAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGTTCATCTGGCAACTTTaGCTGCAGATATCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: KVMLNAILGMTAQPQGLQFIWQL*LQISRQ Trigger: CTGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAA...CTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTCAACATAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCATTATGTCCTTTGATATGTaGCCCCATGTCAGTCCTACA | + |
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Preference number: 4 (lower is better) Translates to: RHDSTATRLTELIIFIPIMSFDM*PHVSPT Trigger: TGTAGGACTGACATGGGGCCACATATCAAAGGACAT...AATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAATGCATTCAGACGGGCATTCAAAGGAAGGAGTACAGATTCCAACTCAATGATGTCTTGTGGTaGCAAAGACAGAATGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLECIQTGIQRKEYRFQLNDVLW*QRQNVL Trigger: AAGGACATTCTGTCTTTGCCACCACAAGACATCATT...GAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR CCA 90 bp | TGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCAACAGTATGTCTTCCTaGAAGGGTAGACTCTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: CYPRHDSTATRLTELIIFNSMSS*KGRLCY Trigger: ATAGCAGAGTCTACCCTTCCAGGAAGACATACTGTT...GAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| 3UTR CAA 72 bp | CCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATaGATCATCTTCATACCCATTGAGTTTCCTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: PRHDSTATRLTE*IIFIPIEFPQI Trigger: TATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR GCA 90 bp | GACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCTAAGACAGCTTTaGCTGGTAGAGATCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: DSTATRLTELIIFIPIEFPLRQL*LVEIFC Trigger: ACAGAAGATCTCTACCAGGCAAAGCTGTCTTAGAGG...AAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | GTAGCGGACATAAACGTTTATTGTCACAGCTGGAATGCATTCAGACGGGCATTCAAGAATGATGTCTTGTaGTGGCAAAGACAGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: VADINVYCHSWNAFRRAFKNDVL*WQRQNV Trigger: GACATTCTGTCTTTGCCACCACAAGACATCATTCTT...GAATGCCCGTCTGAATGCATTCCAGCTGTGACAATAAACGTTTATGTCCGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR GCA 90 bp | GAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCACTTTTGGATTCTTCTaGATCAGGAAGTATACTGTG | + |
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Preference number: 4 (lower is better) Translates to: ECYPRHDSTATRLTELIITFGFF*IRKYTV Trigger: CACAGTATACTTCCTGATGCAGAAGAATCCAAAAGT...GATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR GCA 90 bp | GAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGCTTTATGCCTGGAAGGGTAGACTCTaGTATGTCTTCCTTGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: ELIIFIPIEFPQIIQLYAWKGRL*YVFLVG Trigger: GCCGACAAGGAAGACATAGCAGAGTCTACCCTTCCA...GGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AAAGTTATGTTGAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATGATGTCTTGTGGTaGCAAAGACAGAATGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KVMLNAILGMTAQPQGLQNDVLW*QRQNVL Trigger: AAGGACATTCTGTCTTTGCCACCACAAGACATCATT...CTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTCAACATAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AAAGTTATGTTGAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAAGAATGATGTCTTGTaGTGGCAAAGACAGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: KVMLNAILGMTAQPQGLQKNDVL*WQRQNV Trigger: GACATTCTGTCTTTGCCACCACAAGACATCATTCTT...CTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTCAACATAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR TCA 90 bp | GAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGCTTTATGCCCATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ELIIFIPIEFPQIIQLYAHQIQE*CLVVAK Trigger: CTTTGCCACCACAAGACATCATTCTTGGATCTGATG...GGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AAAGTTATGTTGAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGTCAGGAAGTATACTGTaGCTAAAATGCTTTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KVMLNAILGMTAQPQGLQSGSIL*LKCFQS Trigger: ACTTTGAAAGCATTTTAGCCACAGTATACTTCCTGA...CTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTCAACATAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR GCA 90 bp | AGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGGACTCCAGAGGAATATaGACACATTTCATATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLTELIIFIPIEFPQIIQDSRGI*THFISH Trigger: GTGGGATATGAAATGTGTGCATATTCCTCTGGAGTC...CTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR TCA 90 bp | GAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGCTTTATGCCCCTTTGCAAAGGAGATaGTCAGCATTTCAACAGTAT | + |
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Preference number: 4 (lower is better) Translates to: ELIIFIPIEFPQIIQLYAPLQRR*SAFQQY Trigger: ATACTGTTGAAATGCTGATCATCTCCTTTGCAAAGG...GGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | AGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGGCTTTCAAAGTCTTCTaGTTCAAAGAACACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLTELIIFIPIEFPQIIQAFKVF*FKEHIR Trigger: TCTGATGTGTTCTTTGAACCAGAAGACTTTGAAAGC...CTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR GCA 90 bp | AGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGATACTGTGGCTAAAATaGTTTCAAAGTCTTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLTELIIFIPIEFPQIIQILWLK*FQSLLV Trigger: AACCAGAAGACTTTGAAAGCATTTTAGCCACAGTAT...CTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CCA 90 bp | GAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGCTTTATGCCCCAAAATTGAACTTTTaGATTCTTCTGCATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELIIFIPIEFPQIIQLYAPKLNF*ILLHQE Trigger: TTCCTGATGCAGAAGAATCCAAAAGTTCAATTTTGG...GGCATAAAGCTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 90 bp | GGACATGCAGGACCTGCGGGACGCGGACCTCCAGCACCGCCCGATTaGCTCCGGGAACTGGCTCCTCCCGGAACCGAAAGAGCTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GHAGPAGRGPPAPPD*LRELAPPGTERAGS Trigger: GGACCCAGCTCTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCCTGCATGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 90 bp | ACAGCACAGGGCCAAACATACATTCCATACTGGACATGCAGGACCTaGGGGACGCGGACCTCCAGCACCGCCCGATTGCCTCCGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TAQGQTYIPYWTCRT*GTRTSSTARLPPGT Trigger: AGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | GGGCCAGGACTACAGCACAGGGCCAAACATACATTCCATACTGGACATGCAGGATCTTGCCTCTGCCTTTaGAATGCTGCGGGACGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGLQHRAKHTFHTGHAGSCLCL*NAAGRG Trigger: TCCGCGTCCCGCAGCATTCAAAAGGCAGAGGCAAGA...TCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTAGTCCTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS TCA 90 bp | TCACTGTGTTGTGACTGTGCAGACTATGTTGGCCTCAAACTCCAGTaGTCCTCTTGCCTCTGCCTTTTGAATGCTGGGATTAAAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCCDCADYVGLKLQ*SSCLCLLNAGIKGG Trigger: CCCTCCTTTAATCCCAGCATTCAAAAGGCAGAGGCAAGAGGATCACTGGAGTTTGAGGCCAACATAGTCTGCACAGTCACAACACAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS TCA 90 bp | AGATCCAAGAATGATGTCTTGTGGTGGCAAAGACAGAATGTCCTTTaGTATGTGGCCCCATGTCAGTCCTACAACTTCGACCTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSKNDVLWWQRQNVL*YVAPCQSYNFDLWQ Trigger: CTGCCACAGGTCGAAGTTGTAGGACTGACATGGGGCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCTTGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106370.10 ENSMUST00000143184.2 |
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| CDS-3UTR CAA 90 bp | GACGGGCATTCAAAGGAAGGAGTACAGATTCCAACTCACCGCCACATTTCCACAAAGACAGAATGTCCTTaGATATGTGGCCCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DGHSKEGVQIPTHRHISTKTECP*ICGPMS Trigger: TGACATGGGGCCACATATCAAAGGACATTCTGTCTT...TGTGGAAATGTGGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS TCA 90 bp | CCCCTGACAGCCCTTCTGGTTCAAAGAACACATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAGACAGAATGTCCTTTGATATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLTALLVQRTHQIQE*CLVVAKTECPLICG Trigger: GCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCTTGGATCTGATGTGTTCTTTGAACCAGAAGGGCTGTCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS CCA 90 bp | AGAATGATGTCTTGTGGTGGCAAAGACAGAATGTCCTTTGATATGTaGCCCCATGTCAGTCCTACAACTTCGACCTGTGGCAGGTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: RMMSCGGKDRMSFDM*PHVSPTTSTCGRLF Trigger: GAATAACCTGCCACAGGTCGAAGTTGTAGGACTGACATGGGGCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106370.10 ENSMUST00000143184.2 |
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| CDS-3UTR CAA 90 bp | GAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCACCTCTAAGACAGCTTaGCCTGGTAGAGATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ECYPRHDSTATRLTELIITSKTA*PGRDLL Trigger: CAGAAGATCTCTACCAGGCAAAGCTGTCTTAGAGGT...GATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | GAATGCTATCCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCACTTTAGCACCACATTaGGCAGCCAAAATCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ECYPRHDSTATRLTELIITLAPH*AAKIPG Trigger: TCCTGGGATTTTGGCTGCCAAATGTGGTGCTAAAGT...GATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGGATAGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | CATTCAGACGGGCATTCAAAGGAAGGAGTACAGATTCCAACTCACCGCCACATTATTCATCTGGCAACTTaGCCTGCAGATATCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HSDGHSKEGVQIPTHRHIIHLAT*PADIQT Trigger: TGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAAT...AATGTGGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR CAA 90 bp | CCTAGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCAAGACAGAATGTCCTTaGATATGTGGCCCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRHDSTATRLTELIIFIPKTECP*ICGPMS Trigger: TGACATGGGGCCACATATCAAAGGACATTCTGTCTT...GGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAAACATACATTCCATACTGGACATGCAGGACCAGATGGAAGATTCAGTCTTGCCTCTGCCTTTaGAATGCTGGGATTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGQTYIPYWTCRTRWKIQSCLCL*NAGIKG Trigger: TCCTTTAATCCCAGCATTCAAAAGGCAGAGGCAAGA...CTGAATCTTCCATCTGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS-3UTR CAA 90 bp | ATTGTCACAGCTGGAATGCATTCAGACGGGCATTCAAAGGAAGGAGTACAGATTACTTTAGCACCACATTaGGCAGCCAAAATCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IVTAGMHSDGHSKEGVQITLAPH*AAKIPG Trigger: TCCTGGGATTTTGGCTGCCAAATGTGGTGCTAAAGT...AATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATTCCAGCTGTGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR CAA 90 bp | AATGCATTCAGACGGGCATTCAAAGGAAGGAGTACAGATTCCAACTCACCGCCATCCAAGAATGATGTCTaGTGGTGGCAAAGACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NAFRRAFKGRSTDSNSPPSKNDV*WWQRQN Trigger: ATTCTGTCTTTGCCACCACAAGACATCATTCTTGGA...TGGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS-3UTR CAA 90 bp | AGGCATGACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCATTTCTGCTATGTCTTCCTaGTCGGCATCAAAAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHDSTATRLTELIIFIPISAMSS*SASKDS Trigger: GGAGTCTTTTGATGCCGACAAGGAAGACATAGCAGA...AATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTCATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 90 bp | GATGATCAGCATTTCAACAGTATGTCTTCCTGGAAGGGTAGACTCTaGTATGTCTTCCTTGTCGGCATCAAAAGACTCCAGAGGAATATG | + |
|
Preference number: 5 (lower is better) Translates to: DDQHFNSMSSWKGRL*YVFLVGIKRLQRNM Trigger: CATATTCCTCTGGAGTCTTTTGATGCCGACAAGGAAGACATAGCAGAGTCTACCCTTCCAGGAAGACATACTGTTGAAATGCTGATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS TCA 90 bp | AATATGCACACATTTCATATCCCACTTGTAGAGCAAGCCTTCAAGTaGCCAGTCAGCACTTCGGACCTGGTATGTAGACCAAAATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NMHTFHIPLVEQAFK*PVSTSDLVCRPKLN Trigger: GTTCAATTTTGGTCTACATACCAGGTCCGAAGTGCTGACTGGTCACTTGAAGGCTTGCTCTACAAGTGGGATATGAAATGTGTGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS TCA 90 bp | TCAAGTGACCAGTCAGCACTTCGGACCTGGTATGTAGACCAAAATTaGACTTTTGGATTCTTCTGCATCAGGAAGTATACTGTGGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSDQSALRTWYVDQN*TFGFFCIRKYTVAK Trigger: TTTAGCCACAGTATACTTCCTGATGCAGAAGAATCCAAAAGTTCAATTTTGGTCTACATACCAGGTCCGAAGTGCTGACTGGTCACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | GACAGCACAGCCACAAGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTTCCAAGAATGATGTCTaGTGGTGGCAAAGACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DSTATRLTELIIFIPIEFSKNDV*WWQRQN Trigger: ATTCTGTCTTTGCCACCACAAGACATCATTCTTGGA...AAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCTTGTGGCTGTGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS TCA 90 bp | TGCTTTCAAAGTCTTCTGGTTCAAAGAACACATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAGACAGAATGTCCTTTGATATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CFQSLLVQRTHQIQE*CLVVAKTECPLICG Trigger: GCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCTTGGATCTGATGTGTTCTTTGAACCAGAAGACTTTGAAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | AGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGATTCATCTGGCAACTTaGCCTGCAGATATCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RLTELIIFIPIEFPQIIQIHLAT*PADIQT Trigger: TGTCTGGATATCTGCAGGCAAAGTTGCCAGATGAAT...CTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS-3UTR CAA 90 bp | AGGCTTACAGAATTGATCATCTTCATACCCATTGAGTTTCCTCAGATAATTCAGACCAAAATTGAACTTTaGGATTCTTCTGCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLTELIIFIPIEFPQIIQTKIEL*DSSASG Trigger: TCCTGATGCAGAAGAATCCAAAAGTTCAATTTTGGT...CTGAATTATCTGAGGAAACTCAATGGGTATGAAGATGATCAATTCTGTAAGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 72 bp | GGACCTGCGGGACGCGGACCTCCAGCACCGCCCGATTaGCTCCGGGAACTGGCTCCTCCCGGAACCGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPAGRGPPAPPD*LRELAPPGTER Trigger: TCTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS CAA 72 bp | AGGACCTGCGGGACGCGGACCTCCAGCACCGCCCGATaGCCTCCGGGAACTGGCTCCTCCCGGAACCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RTCGTRTSSTAR*PPGTGSSRNRK Trigger: CTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS CAA 90 bp | TGGACATGCAGGACCTGCGGGACGCGGACCTCCAGCACCGCCCGATaGCCTCCGGGAACTGGCTCCTCCCGGAACCGAAAGAGCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WTCRTCGTRTSSTAR*PPGTGSSRNRKSWV Trigger: GACCCAGCTCTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCCTGCATGTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS CAA 72 bp | GAATGCTGCGGGACGCGGACCTCCAGCACCGCCCGATaGCCTCCGGGAACTGGCTCCTCCCGGAACCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ECCGTRTSSTAR*PPGTGSSRNRK Trigger: CTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGCATTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS GCA 72 bp | AATGCTGCGGGACGCGGACCTCCAGCACCGCCCGATTaGCTCCGGGAACTGGCTCCTCCCGGAACCGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NAAGRGPPAPPD*LRELAPPGTER Trigger: TCTTTCGGTTCCGGGAGGAGCCAGTTCCCGGAGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGCATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS GCA 72 bp | GGCCAAACATACATTCCATACTGGACATGCAGGACCTaGGGGACGCGGACCTCCAGCACCGCCCGATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQTYIPYWTCRT*GTRTSSTARLP Trigger: AGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 72 bp | ACTCCAGTGATCCTCTTGCCTCTGCCTTTTGAATGCTaGGGGACGCGGACCTCCAGCACCGCCCGATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TPVILLPLPFEC*GTRTSSTARLP Trigger: AGGCAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGCATTCAAAAGGCAGAGGCAAGAGGATCACTGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS GCA 72 bp | CAAACTCCAGTGATCCTCTTGCCTCTGCCTTTTGAATaGTGCGGGACGCGGACCTCCAGCACCGCCCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: QTPVILLPLPFE*CGTRTSSTARL Trigger: CAATCGGGCGGTGCTGGAGGTCCGCGTCCCGCAGCATTCAAAAGGCAGAGGCAAGAGGATCACTGGAGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132593.8 |
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| CDS CCA 72 bp | AGGACTACAGCACAGGGCCAAACATACATTCCATACTaGACATGCAGGACCTGCGGGACGCGGACCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTTAQGQTYIPY*TCRTCGTRTSS Trigger: GCTGGAGGTCCGCGTCCCGCAGGTCCTGCATGTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS TCA 72 bp | CAGGACAGTCACCTCTTCTCCTCCAGTCGAACCCCCTaGCAGCCCTTCTGGTTCAAAGAACACATCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: QDSHLFSSSRTP*QPFWFKEHIRS Trigger: GGATCTGATGTGTTCTTTGAACCAGAAGGGCTGTCAGGGGGTTCGACTGGAGGAGAAGAGGTGACTGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS TCA 72 bp | GCCTCAAACTCCAGTGATCCTCTTGCCTCTGCCTTTTaGATGCTGGGATTAAAGGAGGGATTAAGGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASNSSDPLASAF*MLGLKEGLRAW Trigger: CCATGCCCTTAATCCCTCCTTTAATCCCAGCATTCAAAAGGCAGAGGCAAGAGGATCACTGGAGTTTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS CCA 72 bp | TATGTGGCCCCATGTCAGTCCTACAACTTCGACCTGTaGCAGGTTATTCATCTGGCAACTTTGCCTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: YVAPCQSYNFDL*QVIHLATLPAD Trigger: ATCTGCAGGCAAAGTTGCCAGATGAATAACCTGCCACAGGTCGAAGTTGTAGGACTGACATGGGGCCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106370.10 ENSMUST00000143184.2 |
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| CDS CCA 72 bp | TCTTGTGGTGGCAAAGACAGAATGTCCTTTGATATGTaGCCCCATGTCAGTCCTACAACTTCGACCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCGGKDRMSFDM*PHVSPTTSTCG Trigger: GCCACAGGTCGAAGTTGTAGGACTGACATGGGGCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106370.10 ENSMUST00000143184.2 |
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| CDS TCA 72 bp | TGTGACTGTGCAGACTATGTTGGCCTCAAACTCCAGTaGTCCTCTTGCCTCTGCCTTTTGAATGCTGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: CDCADYVGLKLQ*SSCLCLLNAGI Trigger: AATCCCAGCATTCAAAAGGCAGAGGCAAGAGGATCACTGGAGTTTGAGGCCAACATAGTCTGCACAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140869.2 |
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| CDS TCA 72 bp | AATGATGTCTTGTGGTGGCAAAGACAGAATGTCCTTTaGTATGTGGCCCCATGTCAGTCCTACAACTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: NDVLWWQRQNVL*YVAPCQSYNFD Trigger: GTCGAAGTTGTAGGACTGACATGGGGCCACATATCAAAGGACATTCTGTCTTTGCCACCACAAGACATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106370.10 ENSMUST00000143184.2 |
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| CDS GCA 72 bp | CATTTCAACAGTATGTCTTCCTGGAAGGGTAGACTCTaGTATGTCTTCCTTGTCGGCATCAAAAGACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HFNSMSSWKGRL*YVFLVGIKRLQ Trigger: CTGGAGTCTTTTGATGCCGACAAGGAAGACATAGCAGAGTCTACCCTTCCAGGAAGACATACTGTTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS TCA 72 bp | GCCCTTCTGGTTCAAAGAACACATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAGACAGAATGTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLVQRTHQIQE*CLVVAKTECPL Trigger: CAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCTTGGATCTGATGTGTTCTTTGAACCAGAAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143184.2 |
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| CDS CAA 72 bp | CCAGTCAGCACTTCGGACCTGGTATGTAGACCAAAATaGAACTTTTGGATTCTTCTGCATCAGGAAGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: PVSTSDLVCRPK*NFWILLHQEVY Trigger: GTATACTTCCTGATGCAGAAGAATCCAAAAGTTCAATTTTGGTCTACATACCAGGTCCGAAGTGCTGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
||
| CDS TCA 72 bp | AGTCTTCTGGTTCAAAGAACACATCAGATCCAAGAATaGTGTCTTGTGGTGGCAAAGACAGAATGTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLVQRTHQIQE*CLVVAKTECPL Trigger: CAAAGGACATTCTGTCTTTGCCACCACAAGACATCATTCTTGGATCTGATGTGTTCTTTGAACCAGAAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS GCA 72 bp | GATTCTTCTGCATCAGGAAGTATACTGTGGCTAAAATaGTTTCAAAGTCTTCTGGTTCAAAGAACACATCAG | + |
|
Preference number: 6 (lower is better) Translates to: DSSASGSILWLK*FQSLLVQRTHQ Trigger: CTGATGTGTTCTTTGAACCAGAAGACTTTGAAAGCATTTTAGCCACAGTATACTTCCTGATGCAGAAGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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| CDS CCA 72 bp | GAACTTTTGGATTCTTCTGCATCAGGAAGTATACTGTaGCTAAAATGCTTTCAAAGTCTTCTGGTTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELLDSSASGSIL*LKCFQSLLVQR Trigger: TCTTTGAACCAGAAGACTTTGAAAGCATTTTAGCCACAGTATACTTCCTGATGCAGAAGAATCCAAAAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106370.10 |
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