Pregenerated sensors for METTL22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039345Ensembl transcript IDs: ENSMUST00000046470.16, ENSMUST00000142899.2, ENSMUST00000150790.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTaGAGAGAGGCGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QSHGPAREAHRGHKQ*REAAFAHFDQVARE Trigger: CTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR GCA 90 bp | AGCCCACCTCTGTGTAGTTCTCAGTGGAACCCAGGAGCACACACATaGTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: SPPLCSSQWNPGAHT*WVSSQSSEQREYES Trigger: ACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGTGTGTGCTCCTGGGTTCCACTGAGAACTACACAGAGGTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR CCA 90 bp | CCACCTCTGTGTAGTTCTCAGTGGAACCCAGGAGCACACACATGCTaGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: PPLCSSQWNPGAHTC*VSSQSSEQREYESE Trigger: TTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGTGTGTGCTCCTGGGTTCCACTGAGAACTACACAGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGATCTCAAGGGCAAGATaGCTGAGGGTTTGTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: AMALPGKHTVDINSAERRISRAR*LRVCLY Trigger: ATAAAGACAAACCCTCAGCCATCTTGCCCTTGAGAT...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR-3UTR GCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCCGTGGACATAAACAGTaGAGAGAGGCGGCATTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TCWVSSQSSEQREYESEGRGHKQ*REAAFA Trigger: AGCAAATGCCGCCTCTCTGCACTGTTTATGTCCACG...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR-3UTR TCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCTCACTGTATCTAAAATaGCAGCATCTCAAGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TCWVSSQSSEQREYESEGSLYLK*QHLKGK Trigger: CTTGCCCTTGAGATGCTGTCATTTTAGATACAGTGA...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR CCA 72 bp | GCGCTGGATCTCAGCCCACCTCTGTGTAGTTCTCAGTaGAACCCAGGAGCACACACATGCTGGGTGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ALDLSPPLCSSQ*NPGAHTCWVSS Trigger: GCTGCTCACCCAGCATGTGTGTGCTCCTGGGTTCCACTGAGAACTACACAGAGGTGGGCTGAGATCCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR GCA 72 bp | CTGTGTAGTTCTCAGTGGAACCCAGGAGCACACACATaGTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LCSSQWNPGAHT*WVSSQSSEQRE Trigger: CTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGTGTGTGCTCCTGGGTTCCACTGAGAACTACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR GCA 72 bp | GGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTaGAGAGAGGCGGCATTTGCTCACTTTGACCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: GPAREAHRGHKQ*REAAFAHFDQV Trigger: CACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR CCA 72 bp | TGTAGTTCTCAGTGGAACCCAGGAGCACACACATGCTaGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTAT | + |
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Preference number: 3 (lower is better) Translates to: CSSQWNPGAHTC*VSSQSSEQREY Trigger: ATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGTGTGTGCTCCTGGGTTCCACTGAGAACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR TCA 72 bp | CTAGGGCCATGCAAGGGCCACTCACTGTATCTAAAATaGCAGCATCTCAAGGGCAAGATGGCTGAGGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LGPCKGHSLYLK*QHLKGKMAEGL Trigger: CAAACCCTCAGCCATCTTGCCCTTGAGATGCTGTCATTTTAGATACAGTGAGTGGCCCTTGCATGGCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| 3UTR TCA 72 bp | AGTGCTAAGCACCACACTCTTGATCAATTATATATTTaGGTTACTGTTGTAGGCAGTGATGGGCCCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SAKHHTLDQLYI*VTVVGSDGPQE Trigger: CTCCTGGGGCCCATCACTGCCTACAACAGTAACTCAAATATATAATTGATCAAGAGTGTGGTGCTTAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGCGGGCTCTGCCGGGTTaGGATCAGAAGCAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: AMALPGKHTVDINSAERRRALPG*DQKQPV Trigger: CACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCG...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGCGTTTCGTTGGCACATaGCCAGGAGGTCTGTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: AMALPGKHTVDINSAERRRFVGT*PGGLCR Trigger: TCGGCACAGACCTCCTGGCCATGTGCCAACGAAACG...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCGGCAAGCCCTGTGCCTaGCCCAAGCTCCAGCACGGT | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGGKPCA*PKLQHG Trigger: ACCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCC...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | CGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACTCAGGAGCTGTGTGACAGCCGCACCATGAGGTaGCTCTGGTTGGGGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: RHLLTLTKWLGSTQELCDSRTMR*LWLGVY Trigger: GTACACCCCCAACCAGAGGCACCTCATGGTGCGGCT...GTCACACAGCTCCTGAGTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCGTGTACCTTGTCTCTTaGGGGCTCTGCCGGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGVYLVS*GLCRVG Trigger: CCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACAC...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AGCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGTCAACCCTTCCTGGATaGTGTTGTCATCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHGPAREAHRGHKQCREASTLPG*CCHPQP Trigger: AGGCTGGGGATGACAACACCATCCAGGAAGGGTTGA...CGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGACACTCAACCCTTCCTaGATGGTGTTGTCATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: AMALPGKHTVDINSAERRTLNPS*MVLSSP Trigger: TGGGGATGACAACACCATCCAGGAAGGGTTGAGTGT...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGATTTTGATGATGCTGTaGGGGCAGCTCTCGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: AMALPGKHTVDINSAERRILMML*GQLSYS Trigger: GGAGTACGAGAGCTGCCCCCACAGCATCATCAAAAT...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCCAGTCAGGTGGCTGTTaGGGGCAACGTTTCGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGQSGGC*GQRFVG Trigger: GCCAACGAAACGTTGCCCTCAACAGCCACCTGACTG...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | AGCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGAGCGATTTCTTCTTCTaGCCAGCTGAAGGGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SHGPAREAHRGHKQCREASDFFF*PAEGGF Trigger: AAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCT...CGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | CGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACTCAGGAGCTGTGTGACCGTAGGCTTCACACGTaGCGTCCAAGTGTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RHLLTLTKWLGSTQELCDRRLHT*RPSVSV Trigger: CACTGAGACACTTGGACGTCACGTGTGAAGCCTACG...GTCACACAGCTCCTGAGTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | AAACAGTGCAGAGAGGCGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACCAAGCTCCAGCACGGTaGATCCCTGGAAGAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KQCREAAFAHFDQVAREHQAPAR*IPGRGL Trigger: GAGACCTCTTCCAGGGATGCACCGTGCTGGAGCTTG...GTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | CGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACTCAGGAGCTGTGTGACGGGCTTTGGGATCTGTaGAGAGGTTGTCCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHLLTLTKWLGSTQELCDGLWDL*RGCPSA Trigger: GGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCC...GTCACACAGCTCCTGAGTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | GCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGGCTGAGAAGATGGCGGTaGAGGCATTTTTCAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: AMALPGKHTVDINSAERRLRRWR*RHFSVC Trigger: ACAGACTGAAAAATGCCTGCACCGCCATCTTCTCAG...CCGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCCTGGGACAGGAAGACTaGCTGCCCCATGCCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGLGQED*LPHAIQ Trigger: CTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAG...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | CGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACTCAGGAGCTGTGTGACGACTCCACAAGAGCTTaGACTGGGACAGGAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: RHLLTLTKWLGSTQELCDDSTRA*TGTGRL Trigger: CAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTC...GTCACACAGCTCCTGAGTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AAACAGTGCAGAGAGGCGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACATCAGAAGCAGCCCGTaGCCTTCGTACCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: KQCREAAFAHFDQVAREHIRSSP*PSYHIQ Trigger: CTGGATGTGGTACGAAGGCCACGGGCTGCTTCTGAT...GTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | CGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACTCAGGAGCTGTGTGACCTGCAAGCAGCACAGTaGTGTGGTCATACAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RHLLTLTKWLGSTQELCDLQAAQ*CGHTGQ Trigger: CTGACCTGTATGACCACACCACTGTGCTGCTTGCAG...GTCACACAGCTCCTGAGTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | AAACAGTGCAGAGAGGCGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACAGGGACAAATCCTCATaGCTGTGGCCACTTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KQCREAAFAHFDQVAREHRDKSS*LWPLPD Trigger: GTCAGGAAGTGGCCACAGTCATGAGGATTTGTCCCT...GTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCCACAAGAGCTTGAACTaGGACAGGAAGACTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGHKSLN*DRKTGC Trigger: GCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTG...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCCCTGTGCTAGAATCGTaGGGTGTACCTTGTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TCWVSSQSSEQREYESEGPVLES*GVPCLL Trigger: CAAGAGACAAGGTACACCCCACGATTCTAGCACAGG...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGACCCGCCACACCTGCTTaGCTACATCCTCCAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VCLYSKCVKILVKRSQRRPATPA*LHPPGA Trigger: CGCCCCTGGAGGATGTAGGCAAGCAGGTGTGGCGGG...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGAACTGTGGCCACTTCCTaGCCCAGCAGGGGGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: VCLYSKCVKILVKRSQRRTVATS*PSRGHL Trigger: GAGATGCCCCCTGCTGGGTCAGGAAGTGGCCACAGT...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AATGACAGCATCTCAAGGGCAAGATGGCTGAGGGTTTGTCTTTATTCGAAATGCTTGGGGGTGTACAGGTaGACATCTGACAGCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NDSISRARWLRVCLYSKCLGVYR*TSDSTV Trigger: CACTGTGCTGTCAGATGTCCACCTGTACACCCCCAA...GCATTTCGAATAAAGACAAACCCTCAGCCATCTTGCCCTTGAGATGCTGTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGGGCCAGCTTCTCCAATaGGTCCAGGGAGGCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: RWLRVCLYSKCVKILVKRGQLLQ*VQGGTE Trigger: TTCCGTGCCTCCCTGGACTCATTGGAGAAGCTGGCC...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AATGACAGCATCTCAAGGGCAAGATGGCTGAGGGTTTGTCTTTATTCGAAATGCAGCAGCACAGTGGTGTaGTCATACAGGTCAGCGATT | + |
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Preference number: 4 (lower is better) Translates to: NDSISRARWLRVCLYSKCSSTVV*SYRSAI Trigger: AATCGCTGACCTGTATGACCACACCACTGTGCTGCT...GCATTTCGAATAAAGACAAACCCTCAGCCATCTTGCCCTTGAGATGCTGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGACTTCTTCTGACCAGCTaGAGGGGGCTTTGGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: VCLYSKCVKILVKRSQRRLLLTS*RGLWDL Trigger: CAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAG...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGCATCCTCCAGGGGCGTaGCCATGGTGTGCTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: RWLRVCLYSKCVKILVKRHPPGA*PWCALF Trigger: AAATAGAGCACACCATGGCCACGCCCCTGGAGGATG...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR TCA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGGTACAGGTGGACATCTaGCAGCACAGTGTCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: RWLRVCLYSKCVKILVKRVQVDI*QHSVTF Trigger: AAAAGTGACACTGTGCTGTCAGATGTCCACCTGTAC...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGAGCATTTTTCAGTCTGTaGACCAGTCGGGAAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VCLYSKCVKILVKRSQRRAFFSL*TSRESV Trigger: CACACTTTCCCGACTGGTCCACAGACTGAAAAATGC...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CCA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTTTCCACTGAGAAGATaGCGGTGCAGGCATTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RWLRVCLYSKCVKILVKRFPLRR*RCRHFS Trigger: TGAAAAATGCCTGCACCGCCATCTTCTCAGTGGAAA...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 90 bp | GGTGTGTGCCATCGTGGCTGCCACGATGCTGGCAAGCCCTGTGCCTaGCCCAAGCTCCAGCACGGTGCATCCCTGGAAGAGGTCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: GVCHRGCHDAGKPCA*PKLQHGASLEEVSS Trigger: CGAAGAGACCTCTTCCAGGGATGCACCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS TCA 90 bp | CATAGACGAGCAGCTGCGGGAAGGAGGCCTCCACAGGCTCCACCATaGAGCGCAGCCTGCCATCGGCCAGCTTCTCCAATGAGTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HRRAAAGRRPPQAPP*SAACHRPASPMSPG Trigger: CCCTGGACTCATTGGAGAAGCTGGCCGATGGCAGGCTGCGCTTCATGGTGGAGCCTGTGGAGGCCTCCTTCCCGCAGCTGCTCGTCTATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | CACTTCCTGACCCAGCAGGGGGCATCTCCTCTGTGGAGACGTCTGTaGGACCACTGTCCTCAGCCCCCGAGTCTGTCCAAGAGTCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: HFLTQQGASPLWRRL*DHCPQPPSLSKSPD Trigger: GTCGGGACTCTTGGACAGACTCGGGGGCTGAGGACAGTGGTCCCACAGACGTCTCCACAGAGGAGATGCCCCCTGCTGGGTCAGGAAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 90 bp | CTTGTCTCTTGCGGGCTCTGCCGGGTTGGGATCAGAAGCAGCCCGTaGCCTTCGTACCACATCCAGGTCCCCATCCTCGTCCAGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVSCGLCRVGIRSSP*PSYHIQVPILVQGN Trigger: GTTCCCCTGGACGAGGATGGGGACCTGGATGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS GCA 90 bp | GAGTCCCGACTCCACAAGAGCTTGAACTGGGACAGGAAGACTGGCTaGCCCATGCCATTCAGCCGCACCATGAGGTGCCTCTGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESRLHKSLNWDRKTG*PMPFSRTMRCLWLG Trigger: CCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCGGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 90 bp | CATGGCCAGGAGGTCTGTGCCGACATCTGTACAATAAACGGTGTGTaGCATCGTGGCTGCCACGATGCTGGCAAGCCCTGTGCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HGQEVCADICTINGV*HRGCHDAGKPCACP Trigger: GGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCGGCACAGACCTCCTGGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 90 bp | CTAGAATCGTGGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGTTaGGATCAGAAGCAGCCCGTGGCCTTCGTACCACATCCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LESWGVPCLLRALPG*DQKQPVAFVPHPGP Trigger: GGGACCTGGATGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS TCA 90 bp | ACTGGGACAGGAAGACTGGCTGCCCCATGCCATTCAGCCGCACCATaGGGTGCCTCTGGTTGGGGGTGTACAGGTGGACATCTGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGTGRLAAPCHSAAP*GASGWGCTGGHLTA Trigger: TGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS TCA 90 bp | AGGCTCCACCATGAAGCGCAGCCTGCCATCGGCCAGCTTCTCCAATaGGTCCAGGGAGGCACGGAAGTGATCGTAGGCTTCACACGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLHHEAQPAIGQLLQ*VQGGTEVIVGFTRD Trigger: GTCACGTGTGAAGCCTACGATCACTTCCGTGCCTCCCTGGACTCATTGGAGAAGCTGGCCGATGGCAGGCTGCGCTTCATGGTGGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 90 bp | GACAGGAAGACTGGCTGCCCCATGCCATTCAGCCGCACCATGAGGTaGCTCTGGTTGGGGGTGTACAGGTGGACATCTGACAGCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DRKTGCPMPFSRTMR*LWLGVYRWTSDSTV Trigger: CACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 90 bp | CGACATCTGTACAATAAACGGTGTGTGCCATCGTGGCTGCCACGATaGTGGCAAGCCCTGTGCCTGCCCCAAGCTCCAGCACGGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RHLYNKRCVPSWLPR*WQALCLPQAPARCI Trigger: GATGCACCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS GCA 90 bp | GTCTGTGCCGACATCTGTACAATAAACGGTGTGTGCCATCGTGGCTaGCACGATGCTGGCAAGCCCTGTGCCTGCCCCAAGCTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCADICTINGVCHRG*HDAGKPCACPKLQH Trigger: GTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCGGCACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS GCA 90 bp | ACGCTGCTGGTTCCACAACTATCTTCCAGAGCTCCAGCTGCCGGATaGGTTCATAGACGAGCAGCTGCGGGAAGGAGGCCTCCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLVPQLSSRAPAAG*VHRRAAAGRRPPQA Trigger: AGCCTGTGGAGGCCTCCTTCCCGCAGCTGCTCGTCTATGAACGCATCCGGCAGCTGGAGCTCTGGAAGATAGTTGTGGAACCAGCAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | CATCTGTACAATAAACGGTGTGTGCCATCGTGGCTGCCACGATGCTaGCAAGCCCTGTGCCTGCCCCAAGCTCCAGCACGGTGCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLYNKRCVPSWLPRC*QALCLPQAPARCIP Trigger: AGGGATGCACCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 90 bp | GGAGGTCTGTGCCGACATCTGTACAATAAACGGTGTGTGCCATCGTaGCTGCCACGATGCTGGCAAGCCCTGTGCCTGCCCCAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGLCRHLYNKRCVPS*LPRCWQALCLPQAP Trigger: TGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCGGCACAGACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 90 bp | CCAAGAGTCCCGACTCCACAAGAGCTTGAACTGGGACAGGAAGACTaGCTGCCCCATGCCATTCAGCCGCACCATGAGGTGCCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRVPTPQELELGQED*LPHAIQPHHEVPLV Trigger: AACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCGGGACTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | ACTCCTGGTCTCCCACGAGGTCATCTTCCTCCTGTGCTAGAATCGTaGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGTTGGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPGLPRGHLPPVLES*GVPCLLRALPGWDQ Trigger: CTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGGAAGATGACCTCGTGGGAGACCAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 90 bp | TCCAGCTCCTTGACCTTAACCACGCCACCTCCAGTGGCAGTCAGGTaGCTGTTGAGGGCAACGTTTCGTTGGCACATGGCCAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSSLTLTTPPPVAVR*LLRATFRWHMARRS Trigger: AGACCTCCTGGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACTGGAGGTGGCGTGGTTAAGGTCAAGGAGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS-3UTR CAA 90 bp | AAACAGTGCAGAGAGGCGGCATTTGCTCACTTTGACCAAGTGGCTCGGGAGCACGGTGTACCTTGTCTCTaGCGGGCTCTGCCGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQCREAAFAHFDQVAREHGVPCL*RALPGW Trigger: CCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACC...GTGCTCCCGAGCCACTTGGTCAAAGTGAGCAAATGCCGCCTCTCTGCACTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS TCA 90 bp | CCGCACCATGAGGTGCCTCTGGTTGGGGGTGTACAGGTGGACATCTaGCAGCACAGTGTCACTTTTGAAGGTGACCTCGTCCATGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PHHEVPLVGGVQVDI*QHSVTFEGDLVHGW Trigger: CCAGCCATGGACGAGGTCACCTTCAAAAGTGACACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | AAGACTGGCTGCCCCATGCCATTCAGCCGCACCATGAGGTGCCTCTaGTTGGGGGTGTACAGGTGGACATCTGACAGCACAGTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KTGCPMPFSRTMRCL*LGVYRWTSDSTVSL Trigger: AAGTGACACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | AGCCATGGCCCTGCCAGGGAAGCACACCGTGGACATAAACAGTGCAGAGAGGCGCGACTCCACAAGAGCTaGAACTGGGACAGGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SHGPAREAHRGHKQCREARLHKS*NWDRKT Trigger: AGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCG...CGCCTCTCTGCACTGTTTATGTCCACGGTGTGCTTCCCTGGCAGGGCCATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | CCATTCAGCCGCACCATGAGGTGCCTCTGGTTGGGGGTGTACAGGTaGACATCTGACAGCACAGTGTCACTTTTGAAGGTGACCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFSRTMRCLWLGVYR*TSDSTVSLLKVTSS Trigger: GGACGAGGTCACCTTCAAAAGTGACACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | ACATGCTGGGTGAGCAGCCAGTCCTCTGAGCAGAGGGAGTATGAAAGTGAAGGCGCAGTCAGGTGGCTGTaGAGGGCAACGTTTCGTTGG | + |
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Preference number: 5 (lower is better) Translates to: TCWVSSQSSEQREYESEGAVRWL*RATFRW Trigger: CCAACGAAACGTTGCCCTCAACAGCCACCTGACTGC...GCCTTCACTTTCATACTCCCTCTGCTCAGAGGACTGGCTGCTCACCCAGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 90 bp | GTGTGCTCTATTTTGATGATGCTGTGGGGGCAGCTCTCGTACTCCTaGTCTCCCACGAGGTCATCTTCCTCCTGTGCTAGAATCGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCSILMMLWGQLSYS*SPTRSSSSCARIVG Trigger: CCCCACGATTCTAGCACAGGAGGAAGATGACCTCGTGGGAGACCAGGAGTACGAGAGCTGCCCCCACAGCATCATCAAAATAGAGCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS TCA 90 bp | CAGTGGTGTGGTCATACAGGTCAGCGATTTCTTCTTCTGACCAGCTaGAGGGGGCTTTGGGATCTGTGCAGAGGTTGTCCTTCAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QWCGHTGQRFLLLTS*RGLWDLCRGCPSAS Trigger: ACTGGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGACCTGTATGACCACACCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS TCA 90 bp | AAGCAGCACAGTGGTGTGGTCATACAGGTCAGCGATTTCTTCTTCTaGCCAGCTGAAGGGGGCTTTGGGATCTGTGCAGAGGTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQHSGVVIQVSDFFF*PAEGGFGICAEVVL Trigger: AAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGACCTGTATGACCACACCACTGTGCTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGAGCGGGCTCTGCCGGGTaGGGATCAGAAGCAGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VCLYSKCVKILVKRSQRRAGSAG*GSEAAR Trigger: ACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGC...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGACCCCGCCACACCTGCTaGCCTACATCCTCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCLYSKCVKILVKRSQRRPRHTC*PTSSRG Trigger: GCCCCTGGAGGATGTAGGCAAGCAGGTGTGGCGGGG...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGTCACAGAGGCGAGGATCTGTGCAGAGGTaGTCCTTCAGCCAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCLYSKCVKILVKRSQRRGSVQR*SFSQSS Trigger: GCTGGACTGGCTGAAGGACAACCTCTGCACAGATCC...TCGCCTCTGTGACCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGCAGCTGAAGGGGGCTTaGGGATCTGTGCAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWLRVCLYSKCVKILVKRQLKGA*GSVQRL Trigger: CAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTG...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS-3UTR CAA 90 bp | AGATGGCTGAGGGTTTGTCTTTATTCGAAATGCGTTAAAATATTAGTCAAGAGGAGCACAGTGTCACTTTaGAAGGTGACCTCGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RWLRVCLYSKCVKILVKRSTVSL*KVTSSM Trigger: CATGGACGAGGTCACCTTCAAAAGTGACACTGTGCT...CCTCTTGACTAATATTTTAACGCATTTCGAATAAAGACAAACCCTCAGCCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 72 bp | GGCCACTTCCTGACCCAGCAGGGGGCATCTCCTCTGTaGAGACGTCTGTGGGACCACTGTCCTCAGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GHFLTQQGASPL*RRLWDHCPQPP Trigger: CGGGGGCTGAGGACAGTGGTCCCACAGACGTCTCCACAGAGGAGATGCCCCCTGCTGGGTCAGGAAGTGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS TCA 72 bp | GCAGCTGCGGGAAGGAGGCCTCCACAGGCTCCACCATaGAGCGCAGCCTGCCATCGGCCAGCTTCTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: AAAGRRPPQAPP*SAACHRPASPM Trigger: CATTGGAGAAGCTGGCCGATGGCAGGCTGCGCTTCATGGTGGAGCCTGTGGAGGCCTCCTTCCCGCAGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 72 bp | TGCGGGCTCTGCCGGGTTGGGATCAGAAGCAGCCCGTaGCCTTCGTACCACATCCAGGTCCCCATCCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CGLCRVGIRSSP*PSYHIQVPILV Trigger: GACGAGGATGGGGACCTGGATGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | ACCCAGCAGGGGGCATCTCCTCTGTGGAGACGTCTGTaGGACCACTGTCCTCAGCCCCCGAGTCTGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TQQGASPLWRRL*DHCPQPPSLSK Trigger: CTTGGACAGACTCGGGGGCTGAGGACAGTGGTCCCACAGACGTCTCCACAGAGGAGATGCCCCCTGCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | AATAAACGGTGTGTGCCATCGTGGCTGCCACGATGCTaGCAAGCCCTGTGCCTGCCCCAAGCTCCAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: NKRCVPSWLPRC*QALCLPQAPAR Trigger: CCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | GTGGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGTaGGGATCAGAAGCAGCCCGTGGCCTTCGTACCACA | + |
|
Preference number: 6 (lower is better) Translates to: VGCTLSLAGSAG*GSEAARGLRTT Trigger: TGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 90 bp | TCCTCAGCCCCCGAGTCTGTCCAAGAGTCCCGACTCCACAAGAGCTaGAACTGGGACAGGAAGACTGGCTGCCCCATGCCATTCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAPESVQESRLHKS*NWDRKTGCPMPFSR Trigger: GCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCGGGACTCTTGGACAGACTCGGGGGCTGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CAA 90 bp | GCTAGAATCGTGGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGTaGGGATCAGAAGCAGCCCGTGGCCTTCGTACCACATCCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARIVGCTLSLAGSAG*GSEAARGLRTTSRS Trigger: GGACCTGGATGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS GCA 72 bp | ACTGGCTGCCCCATGCCATTCAGCCGCACCATGAGGTaGCTCTGGTTGGGGGTGTACAGGTGGACATCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGCPMPFSRTMR*LWLGVYRWTSD Trigger: GTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 72 bp | TGGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGTTaGGATCAGAAGCAGCCCGTGGCCTTCGTACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: WGVPCLLRALPG*DQKQPVAFVPH Trigger: ATGTGGTACGAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | CCTCCTGTGCTAGAATCGTGGGGTGTACCTTGTCTCTaGCGGGCTCTGCCGGGTTGGGATCAGAAGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPVLESWGVPCL*RALPGWDQKQP Trigger: GGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 90 bp | GGTCATCTTCCTCCTGTGCTAGAATCGTGGGGTGTACCTTGTCTCTaGCGGGCTCTGCCGGGTTGGGATCAGAAGCAGCCCGTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GHLPPVLESWGVPCL*RALPGWDQKQPVAF Trigger: GAAGGCCACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGGAAGATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 90 bp | CCCACGAGGTCATCTTCCTCCTGTGCTAGAATCGTGGGGTGTACCTaGTCTCTTGCGGGCTCTGCCGGGTTGGGATCAGAAGCAGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PTRSSSSCARIVGCT*SLAGSAGLGSEAAR Trigger: ACGGGCTGCTTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGGAAGATGACCTCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 90 bp | TCCTTGACCTTAACCACGCCACCTCCAGTGGCAGTCAGGTGGCTGTaGAGGGCAACGTTTCGTTGGCACATGGCCAGGAGGTCTGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLTLTTPPPVAVRWL*RATFRWHMARRSVP Trigger: CGGCACAGACCTCCTGGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACTGGAGGTGGCGTGGTTAAGGTCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS GCA 72 bp | CTCCACAAGAGCTTGAACTGGGACAGGAAGACTGGCTaGCCCATGCCATTCAGCCGCACCATGAGGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHKSLNWDRKTG*PMPFSRTMRCL Trigger: GAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 72 bp | TGGCAAGCCCTGTGCCTGCCCCAAGCTCCAGCACGGTaGATCCCTGGAAGAGGTCTCTTCGGAACAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: WQALCLPQAPAR*IPGRGLFGTGY Trigger: ATATCCTGTTCCGAAGAGACCTCTTCCAGGGATGCACCGTGCTGGAGCTTGGGGCAGGCACAGGGCTTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | TGCCCCATGCCATTCAGCCGCACCATGAGGTGCCTCTaGTTGGGGGTGTACAGGTGGACATCTGACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: CPMPFSRTMRCL*LGVYRWTSDST Trigger: TGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCGGCTGAATGGCATGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 72 bp | CCGACTCCACAAGAGCTTGAACTGGGACAGGAAGACTaGCTGCCCCATGCCATTCAGCCGCACCATGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PTPQELELGQED*LPHAIQPHHEV Trigger: CACCTCATGGTGCGGCTGAATGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CCA 72 bp | CTCCCACGAGGTCATCTTCCTCCTGTGCTAGAATCGTaGGGTGTACCTTGTCTCTTGCGGGCTCTGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPRGHLPPVLES*GVPCLLRALPG Trigger: ACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGGAAGATGACCTCGTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | GGCGTGGCCATGGTGTGCTCTATTTTGATGATGCTGTaGGGGCAGCTCTCGTACTCCTGGTCTCCCACGAGG | + |
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Preference number: 6 (lower is better) Translates to: GVAMVCSILMML*GQLSYSWSPTR Trigger: CCTCGTGGGAGACCAGGAGTACGAGAGCTGCCCCCACAGCATCATCAAAATAGAGCACACCATGGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | TGCCGACATCTGTACAATAAACGGTGTGTGCCATCGTaGCTGCCACGATGCTGGCAAGCCCTGTGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: CRHLYNKRCVPS*LPRCWQALCLP Trigger: GGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | CCCGAGTCTGTCCAAGAGTCCCGACTCCACAAGAGCTaGAACTGGGACAGGAAGACTGGCTGCCCCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: PESVQESRLHKS*NWDRKTGCPMP Trigger: TGGCATGGGGCAGCCAGTCTTCCTGTCCCAGTTCAAGCTCTTGTGGAGTCGGGACTCTTGGACAGACTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CAA 72 bp | TTAACCACGCCACCTCCAGTGGCAGTCAGGTGGCTGTaGAGGGCAACGTTTCGTTGGCACATGGCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LTTPPPVAVRWL*RATFRWHMARR Trigger: CCTCCTGGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACTGGAGGTGGCGTGGTTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CAA 90 bp | TGCTTGCCTACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTTaGATGATGCTGTGGGGGCAGCTCTCGTACTCCTGGTCTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: CLPTSSRGVAMVCSI*MMLWGQLSYSWSPT Trigger: CGTGGGAGACCAGGAGTACGAGAGCTGCCCCCACAGCATCATCAAAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTAGGCAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS GCA 72 bp | GACATCTGTACAATAAACGGTGTGTGCCATCGTGGCTaGCACGATGCTGGCAAGCCCTGTGCCTGCCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: DICTINGVCHRG*HDAGKPCACPK Trigger: CTTGGGGCAGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | TTGACCTTAACCACGCCACCTCCAGTGGCAGTCAGGTaGCTGTTGAGGGCAACGTTTCGTTGGCACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LTLTTPPPVAVR*LLRATFRWHMA Trigger: GGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACTGGAGGTGGCGTGGTTAAGGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CAA 72 bp | ACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTTaGATGATGCTGTGGGGGCAGCTCTCGTACTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TSSRGVAMVCSI*MMLWGQLSYSW Trigger: CCAGGAGTACGAGAGCTGCCCCCACAGCATCATCAAAATAGAGCACACCATGGCCACGCCCCTGGAGGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | AGTGGCAGTCAGGTGGCTGTTGAGGGCAACGTTTCGTaGGCACATGGCCAGGAGGTCTGTGCCGACATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGSQVAVEGNVS*AHGQEVCADIC Trigger: ACAGATGTCGGCACAGACCTCCTGGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 ENSMUST00000150790.2 |
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| CDS CAA 72 bp | TCTGTGCAGAGGTTGTCCTTCAGCCAGTCCAGCTCCTaGACCTTAACCACGCCACCTCCAGTGGCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVQRLSFSQSSS*TLTTPPPVAVR Trigger: CCTGACTGCCACTGGAGGTGGCGTGGTTAAGGTCAAGGAGCTGGACTGGCTGAAGGACAACCTCTGCACAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CAA 90 bp | GCCACCTCCAGTGGCAGTCAGGTGGCTGTTGAGGGCAACGTTTCGTaGGCACATGGCCAGGAGGTCTGTGCCGACATCTGTACAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: ATSSGSQVAVEGNVS*AHGQEVCADICTIN Trigger: GTTTATTGTACAGATGTCGGCACAGACCTCCTGGCCATGTGCCAACGAAACGTTGCCCTCAACAGCCACCTGACTGCCACTGGAGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS GCA 72 bp | GAGGTCTGTGCCGACATCTGTACAATAAACGGTGTGTaGCATCGTGGCTGCCACGATGCTGGCAAGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: EVCADICTINGV*HRGCHDAGKPC Trigger: ACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTTATTGTACAGATGTCGGCACAGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | GACCAGCTGAAGGGGGCTTTGGGATCTGTGCAGAGGTaGTCCTTCAGCCAGTCCAGCTCCTTGACCTTAACC | + |
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Preference number: 6 (lower is better) Translates to: DQLKGALGSVQR*SFSQSSSLTLT Trigger: GGTTAAGGTCAAGGAGCTGGACTGGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CAA 90 bp | TCTTCTTCTGACCAGCTGAAGGGGGCTTTGGGATCTGTGCAGAGGTaGTCCTTCAGCCAGTCCAGCTCCTTGACCTTAACCACGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SSSDQLKGALGSVQR*SFSQSSSLTLTTPP Trigger: AGGTGGCGTGGTTAAGGTCAAGGAGCTGGACTGGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS TCA 72 bp | GAGGTGCCTCTGGTTGGGGGTGTACAGGTGGACATCTaGCAGCACAGTGTCACTTTTGAAGGTGACCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: EVPLVGGVQVDI*QHSVTFEGDLV Trigger: GACGAGGTCACCTTCAAAAGTGACACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS GCA 72 bp | GGGCAACGTTTCGTTGGCACATGGCCAGGAGGTCTGTaGCGACATCTGTACAATAAACGGTGTGTGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: GQRFVGTWPGGL*RHLYNKRCVPS Trigger: CGATGGCACACACCGTTTATTGTACAGATGTCGGCACAGACCTCCTGGCCATGTGCCAACGAAACGTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | CGCACCATGAGGTGCCTCTGGTTGGGGGTGTACAGGTaGACATCTGACAGCACAGTGTCACTTTTGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTMRCLWLGVYR*TSDSTVSLLKV Trigger: CACCTTCAAAAGTGACACTGTGCTGTCAGATGTCCACCTGTACACCCCCAACCAGAGGCACCTCATGGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046470.16 |
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| CDS CAA 72 bp | TCATCTTCCTCCTGTGCTAGAATCGTGGGGTGTACCTaGTCTCTTGCGGGCTCTGCCGGGTTGGGATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSSCARIVGCT*SLAGSAGLGSE Trigger: TTCTGATCCCAACCCGGCAGAGCCCGCAAGAGACAAGGTACACCCCACGATTCTAGCACAGGAGGAAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CCA 72 bp | ATTTTGATGATGCTGTGGGGGCAGCTCTCGTACTCCTaGTCTCCCACGAGGTCATCTTCCTCCTGTGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: ILMMLWGQLSYS*SPTRSSSSCAR Trigger: TCTAGCACAGGAGGAAGATGACCTCGTGGGAGACCAGGAGTACGAGAGCTGCCCCCACAGCATCATCAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000142899.2 |
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| CDS CAA 72 bp | TCAGCGATTTCTTCTTCTGACCAGCTGAAGGGGGCTTaGGGATCTGTGCAGAGGTTGTCCTTCAGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SAISSSDQLKGA*GSVQRLSFSQS Trigger: GGACTGGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CAA 90 bp | TCATACAGGTCAGCGATTTCTTCTTCTGACCAGCTGAAGGGGGCTTaGGGATCTGTGCAGAGGTTGTCCTTCAGCCAGTCCAGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SYRSAISSSDQLKGA*GSVQRLSFSQSSSL Trigger: CAAGGAGCTGGACTGGCTGAAGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGACCTGTATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS TCA 72 bp | GGTCATACAGGTCAGCGATTTCTTCTTCTGACCAGCTaGAGGGGGCTTTGGGATCTGTGCAGAGGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GHTGQRFLLLTS*RGLWDLCRGCP Trigger: AGGACAACCTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGACCTGTATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS TCA 72 bp | AGTGGTGTGGTCATACAGGTCAGCGATTTCTTCTTCTaGCCAGCTGAAGGGGGCTTTGGGATCTGTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGVVIQVSDFFF*PAEGGFGICAE Trigger: CTCTGCACAGATCCCAAAGCCCCCTTCAGCTGGTCAGAAGAAGAAATCGCTGACCTGTATGACCACACCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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| CDS CCA 72 bp | CATCATCGTAGAACACTTCGGCTGCAAGCAGCACAGTaGTGTGGTCATACAGGTCAGCGATTTCTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HHRRTLRLQAAQ*CGHTGQRFLLL Trigger: CAGAAGAAGAAATCGCTGACCTGTATGACCACACCACTGTGCTGCTTGCAGCCGAAGTGTTCTACGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046470.16 ENSMUST00000150790.2 |
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