Pregenerated sensors for METTL21E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046828Ensembl transcript IDs: ENSMUST00000054801.4
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCTCAAATTCACAAAGATCCACCTCTGCCTCTGCCTCTGCCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SLKFTKIHLCLCLCL*LCLCLCLCLCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | CATGCTAGCCTCAAATTCACAAAGATCCACCTCTGCCTCTGCCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HASLKFTKIHLCLCL*LCLCLCLCLCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAGGCTAGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | GTAGGCCATGCTAGCCTCAAATTCACAAAGATCCACCTCTGCCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VGHASLKFTKIHLCL*LCLCLCLCLCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAGGCTAGCATGGCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTaGCTCTGCCTCCCAAGTTATGAGATTAAAAGCATGCTCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: LCLCLCLCLCLCLCL*LCLPSYEIKSMLHQ Trigger: CTGGTGGAGCATGCTTTTAATCTCATAACTTGGGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTaGCTCTGCCTCTGCCTCCCAAGTTATGAGATTAAAAGCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: LCLCLCLCLCLCLCL*LCLCLPSYEIKSML Trigger: GAGCATGCTTTTAATCTCATAACTTGGGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTaGCTCCCAAGTTATGAGATTAAAAGCATGCTCCACCAGAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: LCLCLCLCLCLCLCL*LPSYEIKSMLHQSP Trigger: TGGACTCTGGTGGAGCATGCTTTTAATCTCATAACTTGGGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | TGTTTTGTAGGCCATGCTAGCCTCAAATTCACAAAGATCCACCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: CFVGHASLKFTKIHL*LCLCLCLCLCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAGGCTAGCATGGCCTACAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | AAAGCAGGCCATTCAAGGTCTAGCAATGAATGGGTCAGCAGAAACTaGCCTTTGTTATTTTCTTCAATTCTCCATCACAACTGCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: KAGHSRSSNEWVSRN*PLLFSSILHHNCTA Trigger: GGCTGTGCAGTTGTGATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCCATTCATTGCTAGACCTTGAATGGCCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | CTACAGCCTCTCTTCAGACCTCATCAATATCTCTGTCTCCCCCTTTaGCACACTATTTTGATGTTTATTCAAGTAGATAAGCATGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: LQPLFRPHQYLCLPL*HTILMFIQVDKHAF Trigger: AAAGGCATGCTTATCTACTTGAATAAACATCAAAATAGTGTGGCAAAGGGGGAGACAGAGATATTGATGAGGTCTGAAGAGAGGCTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CCA 90 bp | ACCAAAATTATCTCCAAAGCAGGCCATTCAAGGTCTAGCAATGAATaGGTCAGCAGAAACTGCCCTTTGTTATTTTCTTCAATTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: TKIISKAGHSRSSNE*VSRNCPLLFSSILH Trigger: ATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCCATTCATTGCTAGACCTTGAATGGCCTGCTTTGGAGATAATTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR TCA 90 bp | TTTATCTGTGAAGTGAGAATAATCATGTCACTGTCCTGTGCAGGCTaGACACTACATAAATGTGAGACCAAATATCCATTCAAGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: FICEVRIIMSLSCAG*TLHKCETKYPFKQI Trigger: TATCTGCTTGAATGGATATTTGGTCTCACATTTATGTAGTGTTCAGCCTGCACAGGACAGTGACATGATTATTCTCACTTCACAGATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | TGTTATAAAGGCCTAACTCCTTACTCTTTCCACATTGACTTATCTTaGATTAAACCTAATTCTAATCCAAAGGGCCACATAAAGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: CYKGLTPYSFHIDLS*IKPNSNPKGHIKKP Trigger: AGGCTTCTTTATGTGGCCCTTTGGATTAGAATTAGGTTTAATGCAAGATAAGTCAATGTGGAAAGAGTAAGGAGTTAGGCCTTTATAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 90 bp | TCTGTGCTTATCAGAAGAGCCTTAAACCTTAAAACAAGCCATGATTaGTTATTGGAGATTAGGAACTTCAATCTTTTTATGCACTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: SVLIRRALNLKTSHD*LLEIRNFNLFMHFQ Trigger: TTGGAAGTGCATAAAAAGATTGAAGTTCCTAATCTCCAATAAGCAATCATGGCTTGTTTTAAGGTTTAAGGCTCTTCTGATAAGCACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGGCATTATAAAGGAAGACACTGTGCTCAAACCTGGGCTTGACTGTCCTCCTAGCAGAGGACACTaGAGTGTTGCCAACCAACAC | + |
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Preference number: 2 (lower is better) Translates to: HKGIIKEDTVLKPGLDCPPSRGH*SVANQH Trigger: GTGTTGGTTGGCAACACTTCAGTGTCCTCTGCTAGG...AGGACAGTCAAGCCCAGGTTTGAGCACAGTGTCTTCCTTTATAATGCCTTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 90 bp | GTGTCACCAAGTGCACATGATAGCCTAGCAGAGGACACTGAAGTGTaGCCAACCAACACAATCCAGACAGTAGCATGTTATAAAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VSPSAHDSLAEDTEV*PTNTIQTVACYKGL Trigger: TAGGCCTTTATAACATGCTACTGTCTGGATTGTGTTGGTTGGCAACACTTCAGTGTCCTCTGCTAGGCTATCATGTGCACTTGGTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | GACACTGAAGTGTTGCCAACCAACACAATCCAGACAGTAGCATGTTATAAAGGCCTCTGCCTCTGCCTCTaGCTCCCAAGTTATGAGATT | + |
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Preference number: 2 (lower is better) Translates to: DTEVLPTNTIQTVACYKGLCLCL*LPSYEI Trigger: AATCTCATAACTTGGGAGGCAGAGGCAGAGGCAGAG...GCCTTTATAACATGCTACTGTCTGGATTGTGTTGGTTGGCAACACTTCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGGCATTATAAAGGAAGACACTGTGCTCAAACCTGGGCTTGACTGTCCTGAGTCCAGTTTCATCTaGGGTATTCTTGGGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: HKGIIKEDTVLKPGLDCPESSFI*GILGLC Trigger: ACAGAGCCCAAGAATACCTCAGATGAAACTGGACTC...AGGACAGTCAAGCCCAGGTTTGAGCACAGTGTCTTCCTTTATAATGCCTTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CCA 90 bp | CATAAAGGCATTATAAAGGAAGACACTGTGCTCAAACCTGGGCTTGACTGTCCTACTGCTAAACAGATATaGCAGCCCACCTCTAAACTT | + |
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Preference number: 2 (lower is better) Translates to: HKGIIKEDTVLKPGLDCPTAKQI*QPTSKL Trigger: AAGTTTAGAGGTGGGCTGCCATATCTGTTTAGCAGT...AGGACAGTCAAGCCCAGGTTTGAGCACAGTGTCTTCCTTTATAATGCCTTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTCAGCAGAAACTGCCCTTTGTTATTTTCTTCAATTCTCCATCACAACTGCACATCTGAGGTATTCTTaGGCTCTGTACATCCACATT | + |
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Preference number: 2 (lower is better) Translates to: GSAETALCYFLQFSITTAHLRYS*ALYIHI Trigger: AATGTGGATGTACAGAGCCCAAGAATACCTCAGATG...TGCAGTTGTGATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR TCA 90 bp | GGCATTATAAAGGAAGACACTGTGCTCAAACCTGGGCTTGACTGTCCTAAATTTTTGCTGAATGTAATTTaGGGGCTGAACAGACAGATT | + |
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Preference number: 2 (lower is better) Translates to: GIIKEDTVLKPGLDCPKFLLNVI*GLNRQI Trigger: AATCTGTCTGTTCAGCCCTCAAATTACATTCAGCAA...AAATTTAGGACAGTCAAGCCCAGGTTTGAGCACAGTGTCTTCCTTTATAATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 90 bp | CACTACATAAATGTGAGACCAAATATCCATTCAAGCAGATACCTGTaGAGACATGTTCCTAAGAAACTCCATGTACTAAGAGCAGCGTAT | + |
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Preference number: 2 (lower is better) Translates to: HYINVRPNIHSSRYL*RHVPKKLHVLRAAY Trigger: ATACGCTGCTCTTAGTACATGGAGTTTCTTAGGAACATGTCTCAACAGGTATCTGCTTGAATGGATATTTGGTCTCACATTTATGTAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTAGGACACTGAAGTGTTaGCAACCAACACAATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HLMHPIPPIVPYVCTENSRTLKC*QPTQSR Trigger: TCTGGATTGTGTTGGTTGGCAACACTTCAGTGTCCT...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | ATCAGAAGAGCCTTAAACCTTAAAACAAGCCATGATTGCTTATTGGAGATTAGGATGAGATTAAAAGCATaGTCCACCAGAGTCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IRRALNLKTSHDCLLEIRMRLKA*STRVQF Trigger: AAACTGGACTCTGGTGGAGCATGCTTTTAATCTCAT...CCTAATCTCCAATAAGCAATCATGGCTTGTTTTAAGGTTTAAGGCTCTTCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCACATTGACTTATCTTGCATTAAACCTAATTCTAATCCAAAGGGCCACAGCCATGATTGCTTATTaGAGATTAGGAACTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: LSTLTYLALNLILIQRATAMIAY*RLGTSI Trigger: GATTGAAGTTCCTAATCTCCAATAAGCAATCATGGC...TGTGGCCCTTTGGATTAGAATTAGGTTTAATGCAAGATAAGTCAATGTGGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | TATCTAGGTATATCTGTGCTTATCAGAAGAGCCTTAAACCTTAAAACAAGCCATGAAAATTTCCATCTTTaGAATGAGAATAGTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: YLGISVLIRRALNLKTSHENFHL*NENSVV Trigger: CACCACACTATTCTCATTGCAAAGATGGAAATTTTC...ATGGCTTGTTTTAAGGTTTAAGGCTCTTCTGATAAGCACAGATATACCTAGATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTACTTCAATCTTTTTATaGACTTCCAACCCAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: HLMHPIPPIVPYVCTENSTSIFL*TSNPKF Trigger: GAACTTTGGGTTGGAAGTGCATAAAAAGATTGAAGT...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR GCA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTAAAACAAGCCATGATTaGTTATTGGAGATTAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: HLMHPIPPIVPYVCTENSKTSHD*LLEIRN Trigger: GTTCCTAATCTCCAATAAGCAATCATGGCTTGTTTT...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 72 bp | CTCAAATTCACAAAGATCCACCTCTGCCTCTGCCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LKFTKIHLCLCL*LCLCLCLCLCL Trigger: GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 72 bp | GCTAGCCTCAAATTCACAAAGATCCACCTCTGCCTCTaGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ASLKFTKIHLCL*LCLCLCLCLCL Trigger: GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGTGGATCTTTGTGAATTTGAGGCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 72 bp | TGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTaGCTCCCAAGTTATGAGATTAAAAGCATGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: CLCLCLCLCLCL*LPSYEIKSMLH Trigger: GTGGAGCATGCTTTTAATCTCATAACTTGGGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR TCA 72 bp | GATTTGGGAACCCTAGCCCATAGAACAGGGCTTCCATaGTCTACTTCCTACAGCCTCTCTTCAGACCTCATC | + |
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Preference number: 3 (lower is better) Translates to: DLGTLAHRTGLP*STSYSLSSDLI Trigger: GATGAGGTCTGAAGAGAGGCTGTAGGAAGTAGATCATGGAAGCCCTGTTCTATGGGCTAGGGTTCCCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CCA 72 bp | ATCTCCAAAGCAGGCCATTCAAGGTCTAGCAATGAATaGGTCAGCAGAAACTGCCCTTTGTTATTTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: ISKAGHSRSSNE*VSRNCPLLFSS Trigger: TGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCCATTCATTGCTAGACCTTGAATGGCCTGCTTTGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CAA 90 bp | GACACTGAAGTGTTGCCAACCAACACAATCCAGACAGTAGCATGTTATAAAGGCAGCCATGATTGCTTATaGGAGATTAGGAACTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: DTEVLPTNTIQTVACYKGSHDCL*EIRNFN Trigger: ATTGAAGTTCCTAATCTCCAATAAGCAATCATGGCT...GCCTTTATAACATGCTACTGTCTGGATTGTGTTGGTTGGCAACACTTCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR GCA 72 bp | CATTCAAGGTCTAGCAATGAATGGGTCAGCAGAAACTaGCCTTTGTTATTTTCTTCAATTCTCCATCACAAC | + |
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Preference number: 3 (lower is better) Translates to: HSRSSNEWVSRN*PLLFSSILHHN Trigger: GTTGTGATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCCATTCATTGCTAGACCTTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CAA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTTGTTTGACCATGATGTaGTTCAGCCAAGAGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: HLMHPIPPIVPYVCTENSCLTMM*FSQEDR Trigger: TCTGTCCTCTTGGCTGAACAACATCATGGTCAAACA...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR-3UTR CAA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTGTTGCTGAATGTAATTaGAGGGCTGAACAGACAGAT | + |
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Preference number: 3 (lower is better) Translates to: HLMHPIPPIVPYVCTENSVAECN*RAEQTD Trigger: ATCTGTCTGTTCAGCCCTCAAATTACATTCAGCAAC...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CCA 72 bp | AATCATTTAAACCTACATTTAAGAGGATTAACAACTTaGATGGGTGTGGTAGTACACACCTGTAGTACTAAC | + |
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Preference number: 3 (lower is better) Translates to: NHLNLHLRGLTT*MGVVVHTCSTN Trigger: GTTAGTACTACAGGTGTGTACTACCACACCCATCCAAGTTGTTAATCCTCTTAAATGTAGGTTTAAATGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR TCA 90 bp | GACACTGAAGTGTTGCCAACCAACACAATCCAGACAGTAGCATGTTATAAAGGCCCCAGGATAGTTCTTTaGCCTGAGGCAGATGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: DTEVLPTNTIQTVACYKGPRIVL*PEADAC Trigger: GCAAGCATCTGCCTCAGGTCAAAGAACTATCCTGGG...GCCTTTATAACATGCTACTGTCTGGATTGTGTTGGTTGGCAACACTTCAGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | GCCTTTGCCTGTAGATTCCATCATGGCTGTTCCTCCTaGATAAACACAACTCTCATCCCTTCTAGTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: AFACRFHHGCSS*INTTLIPSSAP Trigger: AGGTGCACTAGAAGGGATGAGAGTTGTGTTTATCAAGGAGGAACAGCCATGATGGAATCTACAGGCAAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR TCA 90 bp | TGCTCAAACCTGGGCTTGACTGTCCTAAATTTCACTGTGCAGCTGTGTAACCTAGATAGTTCTTTGACCTaGGGCAGATGCTTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: CSNLGLTVLNFTVQLCNLDSSLT*GRCLHF Trigger: GAAATGCAAGCATCTGCCTCAGGTCAAAGAACTATC...TAGGTTACACAGCTGCACAGTGAAATTTAGGACAGTCAAGCCCAGGTTTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR GCA 90 bp | TGCTCAAACCTGGGCTTGACTGTCCTAAATTTCACTGTGCAGCTGTGTAACCTAGGCATAGACAACATCTaGTGCCAGGATGTAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSNLGLTVLNFTVQLCNLGIDNI*CQDVVK Trigger: TTTGACTACATCCTGGCAGCAGATGTTGTCTATGCC...TAGGTTACACAGCTGCACAGTGAAATTTAGGACAGTCAAGCCCAGGTTTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | AGTGCACATGATAGCCTAGCAGAGGACACTGAAGTGTaGCCAACCAACACAATCCAGACAGTAGCATGTTAT | + |
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Preference number: 4 (lower is better) Translates to: SAHDSLAEDTEV*PTNTIQTVACY Trigger: ATAACATGCTACTGTCTGGATTGTGTTGGTTGGCAACACTTCAGTGTCCTCTGCTAGGCTATCATGTGCACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR CCA 90 bp | AGCATGCTCCACCAGAGTCCAGTTTCATCTGAGGTATTCTTGGGCTCTGTACATAGTTATTGGAAGACCTaGGGAAATTCCTGTCTAATG | + |
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Preference number: 4 (lower is better) Translates to: SMLHQSPVSSEVFLGSVHSYWKT*GNSCLM Trigger: CATTAGACAGGAATTTCCCCAGGTCTTCCAATAACT...ATGTACAGAGCCCAAGAATACCTCAGATGAAACTGGACTCTGGTGGAGCATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTGATGTCTCCTACCATGAGTAGAAAGTCTGGAGATAGTGTTAAGAGATGGGATAAAACTTCTTaGCATGATCTCTGCGACCAC | + |
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Preference number: 4 (lower is better) Translates to: PSLMSPTMSRKSGDSVKRWDKTS*HDLCDH Trigger: GTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCA...TCTCTTAACACTATCTCCAGACTTTCTACTCATGGTAGGAGACATCAGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR GCA 90 bp | GGGTCAGCAGAAACTGCCCTTTGTTATTTTCTTCAATTCTCCATCACAACTGCACCTGAGGCAGATGCTTaGATTTCATTTTGGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GSAETALCYFLQFSITTAPEADA*ISFWCF Trigger: GAAACACCAAAATGAAATGCAAGCATCTGCCTCAGG...TGCAGTTGTGATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR CCA 90 bp | ATAGAACAGGGCTTCCATGATCTACTTCCTACAGCCTCTCTTCAGACCTCATCAAGTCGTTATCAGAGTTaGGATAAAACTTCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IEQGFHDLLPTASLQTSSSRYQS*DKTSCH Trigger: ATGGCAAGAAGTTTTATCCCAACTCTGATAACGACT...TGATGAGGTCTGAAGAGAGGCTGTAGGAAGTAGATCATGGAAGCCCTGTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | AGGTCTAGCAATGAATGGGTCAGCAGAAACTGCCCTTaGTTATTTTCTTCAATTCTCCATCACAACTGCACA | + |
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Preference number: 4 (lower is better) Translates to: RSSNEWVSRNCP*LFSSILHHNCT Trigger: TGTGCAGTTGTGATGGAGAATTGAAGAAAATAACAAAGGGCAGTTTCTGCTGACCCATTCATTGCTAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | CATCAATATCTCTGTCTCCCCCTTTGCCACACTATTTaGATGTTTATTCAAGTAGATAAGCATGCCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HQYLCLPLCHTI*MFIQVDKHAFA Trigger: GGCAAAGGCATGCTTATCTACTTGAATAAACATCAAAATAGTGTGGCAAAGGGGGAGACAGAGATATTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | AATGTGAGACCAAATATCCATTCAAGCAGATACCTGTaGAGACATGTTCCTAAGAAACTCCATGTACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NVRPNIHSSRYL*RHVPKKLHVLR Trigger: TCTTAGTACATGGAGTTTCTTAGGAACATGTCTCAACAGGTATCTGCTTGAATGGATATTTGGTCTCACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| 3UTR CAA 72 bp | AGAGCCTTAAACCTTAAAACAAGCCATGATTGCTTATaGGAGATTAGGAACTTCAATCTTTTTATGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: RALNLKTSHDCL*EIRNFNLFMHF Trigger: GAAGTGCATAAAAAGATTGAAGTTCCTAATCTCCAATAAGCAATCATGGCTTGTTTTAAGGTTTAAGGCTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS GCA 90 bp | GCCTTCCCAAGGAATAGTCGTTATCAGAGTTGGGATAAAACTTCTTaGCATGATCTCTGCGACCACCTGCTTGTCATCATCATCGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: AFPRNSRYQSWDKTS*HDLCDHLLVIIIVS Trigger: AGAGACGATGATGATGACAAGCAGGTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCAACTCTGATAACGACTATTCCTTGGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS CCA 90 bp | ACCAGCAAAGTGAAAGCCTTCCCAAGGAATAGTCGTTATCAGAGTTaGGATAAAACTTCTTGCCATGATCTCTGCGACCACCTGCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: TSKVKAFPRNSRYQS*DKTSCHDLCDHLLV Trigger: GACAAGCAGGTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCAACTCTGATAACGACTATTCCTTGGGAAGGCTTTCACTTTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR CAA 90 bp | CTTTCCACATTGACTTATCTTGCATTAAACCTAATTCTAATCCAAAGGGCCACATCTGCGACCACCTGCTaGTCATCATCATCGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LSTLTYLALNLILIQRATSATTC*SSSSSL Trigger: CAGAGACGATGATGATGACAAGCAGGTGGTCGCAGA...TGTGGCCCTTTGGATTAGAATTAGGTTTAATGCAAGATAAGTCAATGTGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR CAA 90 bp | CATTTAATGCACCCTATCCCACCAATAGTACCATATGTTTGTACAGAAAATTCTGAGCACCAAGTAAGCTaGCCACAATGGAGACAAGCC | + |
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Preference number: 5 (lower is better) Translates to: HLMHPIPPIVPYVCTENSEHQVS*PQWRQA Trigger: GGCTTGTCTCCATTGTGGCAAGCTTACTTGGTGCTC...AGAATTTTCTGTACAAACATATGGTACTATTGGTGGGATAGGGTGCATTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS TCA 90 bp | GGGAAATTCCTGTCTAATGCTACTCCCCAGGATAGTTCTTTGACCTaGGGCAGATGCTTGCATTTCATTTTGGTGTTTCTGGAAATATTA | + |
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Preference number: 5 (lower is better) Translates to: GKFLSNATPQDSSLT*GRCLHFILVFLEIL Trigger: TAATATTTCCAGAAACACCAAAATGAAATGCAAGCATCTGCCTCAGGTCAAAGAACTATCCTGGGGAGTAGCATTAGACAGGAATTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS-3UTR CAA 90 bp | GAGGATGTCAAATATCTAGGTATATCTGTGCTTATCAGAAGAGCCTTAAACCTTATCAACCATGTTATATaGCTTGGCATGTGTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: EDVKYLGISVLIRRALNLINHVI*LGMCFQ Trigger: CTGGAAACACATGCCAAGCAATATAACATGGTTGAT...AAGGTTTAAGGCTCTTCTGATAAGCACAGATATACCTAGATATTTGACATCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS CAA 90 bp | TTCTCCAGCCTGAATCTCATAGCCCAGAGTATAATGGTAGTTTCTTaGCAGAGATGGTCAAAGGTCATGAGAAGCTCCTCCAGGAACGGA | + |
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Preference number: 6 (lower is better) Translates to: FSSLNLIAQSIMVVS*QRWSKVMRSSSRNG Trigger: TCCGTTCCTGGAGGAGCTTCTCATGACCTTTGACCATCTCTGCAAAGAAACTACCATTATACTCTGGGCTATGAGATTCAGGCTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS CCA 72 bp | GTGAAAGCCTTCCCAAGGAATAGTCGTTATCAGAGTTaGGATAAAACTTCTTGCCATGATCTCTGCGACCAC | + |
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Preference number: 6 (lower is better) Translates to: VKAFPRNSRYQS*DKTSCHDLCDH Trigger: GTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCAACTCTGATAACGACTATTCCTTGGGAAGGCTTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS TCA 72 bp | CTGTCTAATGCTACTCCCCAGGATAGTTCTTTGACCTaGGGCAGATGCTTGCATTTCATTTTGGTGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSNATPQDSSLT*GRCLHFILVFL Trigger: CAGAAACACCAAAATGAAATGCAAGCATCTGCCTCAGGTCAAAGAACTATCCTGGGGAGTAGCATTAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS GCA 72 bp | AGGAATAGTCGTTATCAGAGTTGGGATAAAACTTCTTaGCATGATCTCTGCGACCACCTGCTTGTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: RNSRYQSWDKTS*HDLCDHLLVII Trigger: GATGATGACAAGCAGGTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCAACTCTGATAACGACTATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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| CDS TCA 72 bp | AATTCCTGTCTAATGCTACTCCCCAGGATAGTTCTTTaGCCTGAGGCAGATGCTTGCATTTCATTTTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: NSCLMLLPRIVL*PEADACISFWC Trigger: ACACCAAAATGAAATGCAAGCATCTGCCTCAGGTCAAAGAACTATCCTGGGGAGTAGCATTAGACAGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054801.4 |
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