Pregenerated sensors for METTL21A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025956Ensembl transcript IDs: ENSMUST00000053469.2, ENSMUST00000114079.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGAGCTGTAGACCAAGTGGGTGATTATAGGTACAATACAGACTaGACCATGGGAGCTGACCTTTGTGAAGAAATGAGATTGAACTCT | + |
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Preference number: 1 (lower is better) Translates to: PGAVDQVGDYRYNTD*TMGADLCEEMRLNS Trigger: AGAGTTCAATCTCATTTCTTCACAAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGTCTACAGCTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR CCA 90 bp | AGCAGCTCTAAGCGGACTGACTTGCAGTCAGCCACGTCATTAACATaGCTAAGAGTTCTAGCTGTAAGACCTTACCTGGTACATTCAATT | + |
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Preference number: 1 (lower is better) Translates to: SSSKRTDLQSATSLT*LRVLAVRPYLVHSI Trigger: AATTGAATGTACCAGGTAAGGTCTTACAGCTAGAACTCTTAGCCATGTTAATGACGTGGCTGACTGCAAGTCAGTCCGCTTAGAGCTGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR TCA 90 bp | ATTTCATTGCTTATATACTTGCTCCTGAAATCTGGTAAAAAGGTATaGCATGAGACCCAGAGAACTCATCTTCATCTCAAGGGGCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: ISLLIYLLLKSGKKV*HETQRTHLHLKGLK Trigger: CTTAAGCCCCTTGAGATGAAGATGAGTTCTCTGGGTCTCATGTCATACCTTTTTACCAGATTTCAGGAGCAAGTATATAAGCAATGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGTGGGTGATTATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTGAGGTCAGCCTGGCCTaGGGTTTCAGACCAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TKWVIIGTIQTAPWELTFEVSLA*GFRPAH Trigger: GTGGGCTGGTCTGAAACCGCAGGCCAGGCTGACCTC...AAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR GCA 90 bp | AGACCCAGAGAACTCATCTTCATCTCAAGGGGCTTAAGAACTAAACAGTCAGCCGAGGTCAGCCTGGCCTaGGGTTTCAGACCAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RPRELIFISRGLRTKQSAEVSLA*GFRPAH Trigger: GTGGGCTGGTCTGAAACCGCAGGCCAGGCTGACCTC...GGCTGACTGTTTAGTTCTTAAGCCCCTTGAGATGAAGATGAGTTCTCTGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR GCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAGGCCTCCCCGCAGCTTaGAGCCCACCAGGAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EILLDYLVFTGPWVSKATGLPAA*SPPGAV Trigger: TACAGCTCCTGGTGGGCTGCAAGCTGCGGGGAGGCC...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACACAGTCACTGCAAGCTTaGGGTCAGCCTGGCCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: EILLDYLVFTGPWVSKATQSLQA*GQPGLR Trigger: CCGCAGGCCAGGCTGACCTCAAGCTTGCAGTGACTG...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGTGGGTGATTATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTGTCCACTTGCAGAAGTaGGCCAATCTGGCTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: TKWVIIGTIQTAPWELTFVHLQK*ANLADS Trigger: ACTGTCAGCCAGATTGGCTCACTTCTGCAAGTGGAC...AAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGAGAACTCATCTTCATCTCAAGGGGCTTAAGAACTAAACAGTCAGCCGTCCACTTGCAGAAGTaGGCCAATCTGGCTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: RPRELIFISRGLRTKQSAVHLQK*ANLADS Trigger: ACTGTCAGCCAGATTGGCTCACTTCTGCAAGTGGAC...GGCTGACTGTTTAGTTCTTAAGCCCCTTGAGATGAAGATGAGTTCTCTGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAGAGAACTCATCTTCATCTCAAGGGGCTTAAGAACTAAACAGTCAGCCTGTAATCCCAGCAGTTaGCGGCAGAGGGAAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: RPRELIFISRGLRTKQSACNPSS*RQREDS Trigger: ACTGTCTTCCCTCTGCCGCCAACTGCTGGGATTACA...GGCTGACTGTTTAGTTCTTAAGCCCCTTGAGATGAAGATGAGTTCTCTGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | TCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTACCCAGAATGTCTGACTaGCTCTCCAGGTCACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: STNFYHPLPLCSYNSYALPRMSD*LSRSPV Trigger: GACTGGTGACCTGGAGAGTCAGTCAGACATTCTGGG...TAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | TCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTACCATCCCAGAATGTCTaGCTGACTCTCCAGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: STNFYHPLPLCSYNSYALPSQNV*LTLQVT Trigger: GGTGACCTGGAGAGTCAGTCAGACATTCTGGGATGG...TAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR CAA 90 bp | ACCACGAAACATCAATTACCTATAACTGAAATTCTCCTTGACTACTaGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAAGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TTKHQLPITEILLDY*VFTGPWVSKATRPP Trigger: GGGAGGCCTTGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTCAGTTATAGGTAATTGATGTTTCGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | CCAACAGTACACACATTTCAGGGAATATATGTAATAAATCTGTTTACACTCAGCCCCAGAATGTCTGACTaGCTCTCCAGGTCACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PTVHTFQGIYVINLFTLSPRMSD*LSRSPV Trigger: GACTGGTGACCTGGAGAGTCAGTCAGACATTCTGGG...GCTGAGTGTAAACAGATTTATTACATATATTCCCTGAAATGTGTGTACTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCTGTAAAACCCTGGTTTTGATCCTTAACACCACGAAACATCAATTACCTTTCTCCTTGACTACTTaGTTTTTACTGGACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVCKTLVLILNTTKHQLPFSLTT*FLLDPG Trigger: CCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAA...AGGTAATTGATGTTTCGTGGTGTTAAGGATCAAAACCAGGGTTTTACAGACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CCA 90 bp | TCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTATTCTCCTTGACTACTTaGTTTTTACTGGACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: STNFYHPLPLCSYNSYALFSLTT*FLLDPG Trigger: CCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAA...TAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCGTAAAACCCTGGTTTTaGTCCTTAACACCACGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: IQQISITHCHCAVIIAMLVKPWF*SLTPRN Trigger: GTTTCGTGGTGTTAAGGATCAAAACCAGGGTTTTAC...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCGAGAAACAGCAAAGTTaGAACAAACAAAAGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: IQQISITHCHCAVIIAMLEKQQS*NKQKHG Trigger: ACCATGCTTTTGTTTGTTTCAACTTTGCTGTTTCTC...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CCA 90 bp | CCAACAGTACACACATTTCAGGGAATATATGTAATAAATCTGTTTACACTCAGCGCCACGTCATTAACATaGCTAAGAGTTCTAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PTVHTFQGIYVINLFTLSATSLT*LRVLAV Trigger: TACAGCTAGAACTCTTAGCCATGTTAATGACGTGGC...GCTGAGTGTAAACAGATTTATTACATATATTCCCTGAAATGTGTGTACTGTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR CCA 72 bp | AGAGGGAAGACAGTCACTGCAAGCTTGAGGTCAGCCTaGCCTGCGGTTTCAGACCAGCCCACGGCCGACACA | + |
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Preference number: 3 (lower is better) Translates to: RGKTVTASLRSA*PAVSDQPTADT Trigger: TGTGTCGGCCGTGGGCTGGTCTGAAACCGCAGGCCAGGCTGACCTCAAGCTTGCAGTGACTGTCTTCCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CAA 90 bp | AGACCCAGAGAACTCATCTTCATCTCAAGGGGCTTAAGAACTAAACAGTCAGCCACAGTCACTGCAAGCTaGAGGTCAGCCTGGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: RPRELIFISRGLRTKQSATVTAS*RSAWPA Trigger: CGCAGGCCAGGCTGACCTCAAGCTTGCAGTGACTGT...GGCTGACTGTTTAGTTCTTAAGCCCCTTGAGATGAAGATGAGTTCTCTGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR-3UTR CAA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAACAGTCACTGCAAGCTaGAGGTCAGCCTGGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: EILLDYLVFTGPWVSKATTVTAS*RSAWPA Trigger: CGCAGGCCAGGCTGACCTCAAGCTTGCAGTGACTGT...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR GCA 72 bp | AAGAACGAAACACCAGCCAGACCTCACAAGTCCACTTaGAGAAGTGAGCCAATCTGGCTGACAGTTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: KNETPARPHKST*RSEPIWLTVTA Trigger: AGCTGTAACTGTCAGCCAGATTGGCTCACTTCTGCAAGTGGACTTGTGAGGTCTGGCTGGTGTTTCGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR CCA 72 bp | AAGCGGACTGACTTGCAGTCAGCCACGTCATTAACATaGCTAAGAGTTCTAGCTGTAAGACCTTACCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: KRTDLQSATSLT*LRVLAVRPYLV Trigger: TACCAGGTAAGGTCTTACAGCTAGAACTCTTAGCCATGTTAATGACGTGGCTGACTGCAAGTCAGTCCGCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR GCA 72 bp | GTAGACCAAGTGGGTGATTATAGGTACAATACAGACTaGACCATGGGAGCTGACCTTTGTGAAGAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: VDQVGDYRYNTD*TMGADLCEEMR Trigger: TCTCATTTCTTCACAAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| 3UTR GCA 72 bp | GTCTATTCAACAAATTTCTATCACCCACTGCCACTGTaGAGTTATAATAGCTATGCTCTAAACTGCTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: VYSTNFYHPLPL*SYNSYALNCLS Trigger: GCTTAAGCAGTTTAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | ACCAAGTGGGTGATTATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTCAGCAGAGCAGCCCCTaGGCTCCACAGCACCCATCT | + |
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Preference number: 4 (lower is better) Translates to: TKWVIIGTIQTAPWELTFQQSSP*APQHPS Trigger: AGATGGGTGCTGTGGAGCTCAGGGGCTGCTCTGCTG...AAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | ACCAAGTGGGTGATTATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTAGTTGCCTCCAGTCCTaGCGGATCTGGATGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TKWVIIGTIQTAPWELTFSCLQS*RIWMVW Trigger: CCACACCATCCAGATCCGTCAGGACTGGAGGCAACT...AAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAAGTTGCCTCCAGTCCTaGCGGATCTGGATGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EILLDYLVFTGPWVSKATSCLQS*RIWMVW Trigger: CCACACCATCCAGATCCGTCAGGACTGGAGGCAACT...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | TCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTACAGCAGAGCAGCCCCTaGGCTCCACAGCACCCATCT | + |
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Preference number: 4 (lower is better) Translates to: STNFYHPLPLCSYNSYALQQSSP*APQHPS Trigger: AGATGGGTGCTGTGGAGCTCAGGGGCTGCTCTGCTG...TAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAGCCTTAGGTTGGATATaGGGAGGTAAGTTGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EILLDYLVFTGPWVSKATALGWI*GGKLAS Trigger: TGAAGCCAACTTACCTCCCCATATCCAACCTAAGGC...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | TATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTGTGAAGAAATGAGAAGATGTCCCAGTGTTTaGAGAAGGTCTGTGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: YRYNTDCTMGADLCEEMRRCPSV*RRSVKV Trigger: TACCTTCACAGACCTTCTTCAAACACTGGGACATCT...TCTCATTTCTTCACAAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACATCGCAAAAGAGAAGGTaGCGAGAGGCTTATGGAATT | + |
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Preference number: 4 (lower is better) Translates to: EILLDYLVFTGPWVSKATSQKRR*REAYGI Trigger: AATTCCATAAGCCTCTCGCCACCTTCTCTTTTGCGA...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | TCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTACGGATCTGGATGGTGTaGTTCGCAAAAGAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: STNFYHPLPLCSYNSYALRIWMV*FAKEKV Trigger: CACCTTCTCTTTTGCGAACCACACCATCCAGATCCG...TAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCCGGATCTGGATGGTGTaGTTCGCAAAAGAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IQQISITHCHCAVIIAMLRIWMV*FAKEKV Trigger: CACCTTCTCTTTTGCGAACCACACCATCCAGATCCG...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCCCTGACGGATCTGGATaGTGTGGTTCGCAAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IQQISITHCHCAVIIAMLPDGSG*CGSQKR Trigger: TCTCTTTTGCGAACCACACCATCCAGATCCGTCAGG...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | AAATCTGTTTACACTCAGCAGACAAGGAAACTGAGACAAAATCCATCCCAGAATCCTGACGGATCTGGATaGTGTGGTTCGCAAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KSVYTQQTRKLRQNPSQNPDGSG*CGSQKR Trigger: TCTCTTTTGCGAACCACACCATCCAGATCCGTCAGG...ATTCTGGGATGGATTTTGTCTCAGTTTCCTTGTCTGCTGAGTGTAAACAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | GAAATTCTCCTTGACTACTTGGTTTTTACTGGACCCTGGGTAAGCAAAGCTACAACAACAGCCTTAGGTTaGATATGGGGAGGTAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: EILLDYLVFTGPWVSKATTTALG*IWGGKL Trigger: CAACTTACCTCCCCATATCCAACCTAAGGCTGTTGT...TGTAGCTTTGCTTACCCAGGGTCCAGTAAAAACCAAGTAGTCAAGGAGAATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | AGGGTCTGTAAAACCCTGGTTTTGATCCTTAACACCACGAAACATCAATTACCTAGATGTCCCAGTGTTTaGAGAAGGTCTGTGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: RVCKTLVLILNTTKHQLPRCPSV*RRSVKV Trigger: TACCTTCACAGACCTTCTTCAAACACTGGGACATCT...AGGTAATTGATGTTTCGTGGTGTTAAGGATCAAAACCAGGGTTTTACAGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCGAACCTTACTCACAGTaGATTGCCTCTCCAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: IQQISITHCHCAVIIAMLEPYSQ*IASPAL Trigger: CAATGCTGGAGAGGCAATTCACTGTGAGTAAGGTTC...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR TCA 90 bp | AAATCTGTTTACACTCAGCAGACAAGGAAACTGAGACAAAATCCATCCCAGAATCATCAGCTCCAAGTATaGGATCAAATTCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KSVYTQQTRKLRQNPSQNHQLQV*DQILQV Trigger: CACCTGGAGAATTTGATCTCATACTTGGAGCTGATG...ATTCTGGGATGGATTTTGTCTCAGTTTCCTTGTCTGCTGAGTGTAAACAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR GCA 90 bp | AGGGTCTGTAAAACCCTGGTTTTGATCCTTAACACCACGAAACATCAATTACCTGAATCACAGAATTGTTaGTACAGAGATGTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RVCKTLVLILNTTKHQLPESQNC*YRDVPV Trigger: CACTGGGACATCTCTGTAGCAACAATTCTGTGATTC...AGGTAATTGATGTTTCGTGGTGTTAAGGATCAAAACCAGGGTTTTACAGACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCACAACAGCCTTAGGTTaGATATGGGGAGGTAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: IQQISITHCHCAVIIAMLTTALG*IWGGKL Trigger: CAACTTACCTCCCCATATCCAACCTAAGGCTGTTGT...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR GCA 90 bp | AAATCTGTTTACACTCAGCAGACAAGGAAACTGAGACAAAATCCATCCCAGAATGAATCACAGAATTGTTaGTACAGAGATGTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KSVYTQQTRKLRQNPSQNESQNC*YRDVPV Trigger: CACTGGGACATCTCTGTAGCAACAATTCTGTGATTC...ATTCTGGGATGGATTTTGTCTCAGTTTCCTTGTCTGCTGAGTGTAAACAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR GCA 90 bp | AGGGTCTGTAAAACCCTGGTTTTGATCCTTAACACCACGAAACATCAATTACCTTTACTCACAGTGAATTaGCTCTCCAGCATTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: RVCKTLVLILNTTKHQLPLLTVN*LSSIVK Trigger: CTTAACAATGCTGGAGAGGCAATTCACTGTGAGTAA...AGGTAATTGATGTTTCGTGGTGTTAAGGATCAAAACCAGGGTTTTACAGACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CCA 90 bp | CCAACAGTACACACATTTCAGGGAATATATGTAATAAATCTGTTTACACTCAGCGCCTTAGGTTGGATATaGGGAGGTAAGTTGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PTVHTFQGIYVINLFTLSALGWI*GGKLAS Trigger: TGAAGCCAACTTACCTCCCCATATCCAACCTAAGGC...GCTGAGTGTAAACAGATTTATTACATATATTCCCTGAAATGTGTGTACTGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR GCA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTTACTCACAGTGAATTaGCTCTCCAGCATTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: IQQISITHCHCAVIIAMLLLTVN*LSSIVK Trigger: CTTAACAATGCTGGAGAGGCAATTCACTGTGAGTAA...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS TCA 90 bp | GCCGCATCCCACACCACTGCAGCAACTCCCAGTTGCCTCCAGTCCTaGCGGATCTGGATGGTGTGGTTCGCAAAAGAGAAGGTGGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: AASHTTAATPSCLQS*RIWMVWFAKEKVAR Trigger: TCTCGCCACCTTCTCTTTTGCGAACCACACCATCCAGATCCGTCAGGACTGGAGGCAACTGGGAGTTGCTGCAGTGGTGTGGGATGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CAA 90 bp | AAATCTGTTTACACTCAGCAGACAAGGAAACTGAGACAAAATCCATCCCAGAATTGCAGCAACTCCCAGTaGCCTCCAGTCCTGACGGAT | + |
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Preference number: 5 (lower is better) Translates to: KSVYTQQTRKLRQNPSQNCSNSQ*PPVLTD Trigger: ATCCGTCAGGACTGGAGGCAACTGGGAGTTGCTGCA...ATTCTGGGATGGATTTTGTCTCAGTTTCCTTGTCTGCTGAGTGTAAACAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CAA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCTGCAGCAACTCCCAGTaGCCTCCAGTCCTGACGGAT | + |
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Preference number: 5 (lower is better) Translates to: IQQISITHCHCAVIIAMLCSNSQ*PPVLTD Trigger: ATCCGTCAGGACTGGAGGCAACTGGGAGTTGCTGCA...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CAA 90 bp | TATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTGTGAAGAAATGAGAGAGATGTCCCAGTGTTaGAAGAAGGTCTGTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: YRYNTDCTMGADLCEEMREMSQC*KKVCEG Trigger: ACCTTCACAGACCTTCTTCAAACACTGGGACATCTC...TCTCATTTCTTCACAAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CAA 90 bp | ACCAAGTGGGTGATTATAGGTACAATACAGACTGCACCATGGGAGCTGACCTTTAAAACTTTCCAAATTTaGTCCCCAAGTCAGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TKWVIIGTIQTAPWELTFKTFQI*SPSQLL Trigger: AAGGAGCTGACTTGGGGACAAAATTTGGAAAGTTTT...AAAGGTCAGCTCCCATGGTGCAGTCTGTATTGTACCTATAATCACCCACTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS-3UTR CAA 90 bp | ATTCAACAAATTTCTATCACCCACTGCCACTGTGCAGTTATAATAGCTATGCTCAAAACTTTCCAAATTTaGTCCCCAAGTCAGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: IQQISITHCHCAVIIAMLKTFQI*SPSQLL Trigger: AAGGAGCTGACTTGGGGACAAAATTTGGAAAGTTTT...GAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGAAATTTGTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS CAA 90 bp | GGAAAGGACGACAGCCGCATCCCACACCACTGCAGCAACTCCCAGTaGCCTCCAGTCCTGACGGATCTGGATGGTGTGGTTCGCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GKDDSRIPHHCSNSQ*PPVLTDLDGVVRKR Trigger: TCTTTTGCGAACCACACCATCCAGATCCGTCAGGACTGGAGGCAACTGGGAGTTGCTGCAGTGGTGTGGGATGCGGCTGTCGTCCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS CCA 72 bp | CAACTCCCAGTTGCCTCCAGTCCTGACGGATCTGGATaGTGTGGTTCGCAAAAGAGAAGGTGGCGAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QLPVASSPDGSG*CGSQKRRWREA Trigger: AGCCTCTCGCCACCTTCTCTTTTGCGAACCACACCATCCAGATCCGTCAGGACTGGAGGCAACTGGGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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| CDS CAA 72 bp | TTAACAACAGCCTTAGGTTGGATATGGGGAGGTAAGTaGGCTTCAACGTTTGACTTAAGAAACTCTAATGCT | + |
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Preference number: 6 (lower is better) Translates to: LTTALGWIWGGK*ASTFDLRNSNA Trigger: AGCATTAGAGTTTCTTAAGTCAAACGTTGAAGCCAACTTACCTCCCCATATCCAACCTAAGGCTGTTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053469.2 ENSMUST00000114079.9 |
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