Pregenerated sensors for METTL18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041396

Ensembl transcript IDs: ENSMUST00000045694.14, ENSMUST00000111490.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGGGGGTGGGCTGCCAGTGTCTTCAGAGGAAGCTGCATTTCCCAGTaGGGAGCATTTCCAAGAGTGATCCCGAGGCAAGCCCGGACGTTC	+
Preference number: 5 (lower is better) Translates to: RGWAASVFRGSCISQ*GAFPRVIPRQARTF Trigger: GAACGTCCGGGCTTGCCTCGGGATCACTCTTGGAAATGCTCCTCACTGGGAAATGCAGCTTCCTCTGAAGACACTGGCAGCCCACCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS TCA 90 bp	TCTTCAGAGGAAGCTGCATTTCCCAGTGAGGAGCATTTCCAAGAGTaGTCCCGAGGCAAGCCCGGACGTTCTGTAGATTGCCTTTTGTCC	+
Preference number: 5 (lower is better) Translates to: SSEEAAFPSEEHFQE*SRGKPGRSVDCLLS Trigger: GGACAAAAGGCAATCTACAGAACGTCCGGGCTTGCCTCGGGATCACTCTTGGAAATGCTCCTCACTGGGAAATGCAGCTTCCTCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS CCA 90 bp	ACATCTTTAGGCATCACATGTTCTTTAGCAGGTTTCCAGGAGGGCTaGTGTTTACAAGCTTCTGGGTCATCTGACCTGTCAGCAATAGGG	+
Preference number: 5 (lower is better) Translates to: TSLGITCSLAGFQEG*CLQASGSSDLSAIG Trigger: CCCTATTGCTGACAGGTCAGATGACCCAGAAGCTTGTAAACACCAGCCCTCCTGGAAACCTGCTAAAGAACATGTGATGCCTAAAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS TCA 90 bp	GTGCTTTGCTGGCCAGAAGCACCCGGCCACTCCTACTTAATAGCCTaGGGAATGTTTCATGCAAAGTGCTGTAATAATCCGGATTATAAA	+
Preference number: 5 (lower is better) Translates to: VLCWPEAPGHSYLIA*GMFHAKCCNNPDYK Trigger: TTTATAATCCGGATTATTACAGCACTTTGCATGAAACATTCCTCAGGCTATTAAGTAGGAGTGGCCGGGTGCTTCTGGCCAGCAAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS TCA 72 bp	CCAGGAGGGCTGGTGTTTACAAGCTTCTGGGTCATCTaGCCTGTCAGCAATAGGGGGTGGGCTGCCAGTGTC	+
Preference number: 6 (lower is better) Translates to: PGGLVFTSFWVI*PVSNRGWAASV Trigger: GACACTGGCAGCCCACCCCCTATTGCTGACAGGTCAGATGACCCAGAAGCTTGTAAACACCAGCCCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS TCA 72 bp	GCTGCCAGTGTCTTCAGAGGAAGCTGCATTTCCCAGTaGGGAGCATTTCCAAGAGTGATCCCGAGGCAAGCC	+
Preference number: 6 (lower is better) Translates to: AASVFRGSCISQ*GAFPRVIPRQA Trigger: GGCTTGCCTCGGGATCACTCTTGGAAATGCTCCTCACTGGGAAATGCAGCTTCCTCTGAAGACACTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS TCA 72 bp	GAAGCTGCATTTCCCAGTGAGGAGCATTTCCAAGAGTaGTCCCGAGGCAAGCCCGGACGTTCTGTAGATTGC	+
Preference number: 6 (lower is better) Translates to: EAAFPSEEHFQE*SRGKPGRSVDC Trigger: GCAATCTACAGAACGTCCGGGCTTGCCTCGGGATCACTCTTGGAAATGCTCCTCACTGGGAAATGCAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS CCA 72 bp	GAACGCCACCACCAACACCAAAATAATGTGCTTTGCTaGCCAGAAGCACCCGGCCACTCCTACTTAATAGCC	+
Preference number: 6 (lower is better) Translates to: ERHHQHQNNVLC*PEAPGHSYLIA Trigger: GGCTATTAAGTAGGAGTGGCCGGGTGCTTCTGGCCAGCAAAGCACATTATTTTGGTGTTGGTGGTGGCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS GCA 72 bp	GATGAACGCCACCACCAACACCAAAATAATGTGCTTTaGTGGCCAGAAGCACCCGGCCACTCCTACTTAATA	+
Preference number: 6 (lower is better) Translates to: DERHHQHQNNVL*WPEAPGHSYLI Trigger: TATTAAGTAGGAGTGGCCGGGTGCTTCTGGCCAGCAAAGCACATTATTTTGGTGTTGGTGGTGGCGTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS GCA 72 bp	AGGGAATTTCTCTTTCAAAGAGACGGTTTTCACTACTaGTGTGTTAGCATGCTGGGGACCTGGCAACATTTC	+
Preference number: 6 (lower is better) Translates to: REFLFQRDGFHY*CVSMLGTWQHF Trigger: GAAATGTTGCCAGGTCCCCAGCATGCTAACACAGCAGTAGTGAAAACCGTCTCTTTGAAAGAGAAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2
CDS CAA 90 bp	ACTTCTGACTTCCTTTGTCTTTTCCCATCTGGCTCATTTTTGCCATaGCTGTCATCTTGCAAAGGGACATTAGCAACTACATTAGGTAAG	+
Preference number: 6 (lower is better) Translates to: TSDFLCLFPSGSFLP*LSSCKGTLATTLGK Trigger: CTTACCTAATGTAGTTGCTAATGTCCCTTTGCAAGATGACAGCAATGGCAAAAATGAGCCAGATGGGAAAAGACAAAGGAAGTCAGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045694.14 ENSMUST00000111490.2

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