RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000010554

Ensembl transcript IDs: ENSMUST00000010698.13, ENSMUST00000092912.12, ENSMUST00000141755.8

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCCGTGGCCTCGGGAGTCTCCTCCTGGCACAGTAACTTCTGGCTaGGGCAATGGCCTCCATCAGCAGCAGCCTCGCCGCCCGGCACAT +
Preference number: 1 (lower is better)
Translates to: PPWPRESPPGTVTSG*GNGLHQQQPRRPAH
Trigger: ATGTGCCGGGCGGCGAGGCTGCTGCTGATGGAGGCCATTGCCTCAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGCCACGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 90 bp GCAGCCTCGCCGCCCGGCACATCAAGCCCACACAGGGCACTCTCTTaGGGGCTGTGGGCCACGTCTTGGCCACTACTCAGCTCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: AASPPGTSSPHRALS*GLWATSWPLLSSLG
Trigger: TCCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGTGGGCTTGATGTGCCGGGCGGCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 90 bp GCCTCGGGAGTCTCCTCCTGGCACAGTAACTTCTGGCTGAGGCAATaGCCTCCATCAGCAGCAGCCTCGCCGCCCGGCACATCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: ASGVSSWHSNFWLRQ*PPSAAASPPGTSSP
Trigger: TGGGCTTGATGTGCCGGGCGGCGAGGCTGCTGCTGATGGAGGCCATTGCCTCAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 90 bp CTGGTGCCCTATATAAGGAGTGGAACAGCACTGCTAACCCAGTGCTaGGAGGCTGCCAAGCTGCGCTCTCCCACTGCTCCCTGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: LVPYIRSGTALLTQC*EAAKLRSPTAPCPG
Trigger: CCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTGGCAGCCTCTCAGCACTGGGTTAGCAGTGCTGTTCCACTCCTTATATAGGGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp CTGCTGTTTCTGAAGTCCCCTGCTGTGTCTGAAGTCCCCTGCTGTTaGGTCCTCCCGCAGGCAGGGCGCTCTCACGTCTCACTCTCCAGA +
Preference number: 1 (lower is better)
Translates to: LLFLKSPAVSEVPCC*VLPQAGRSHVSLSR
Trigger: TCTGGAGAGTGAGACGTGAGAGCGCCCTGCCTGCGGGAGGACTCAACAGCAGGGGACTTCAGACACAGCAGGGGACTTCAGAAACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp ACCCACACCAGATGCCACCAGAGCCCCTCTGGCCTTTGGCTGCGATaGTCTGCTCCTCCTAGGTTTAGCTGCTGTGAAGAGGGCAAGGGT +
Preference number: 1 (lower is better)
Translates to: THTRCHQSPSGLWLR*SAPPRFSCCEEGKG
Trigger: ACCCTTGCCCTCTTCACAGCAGCTAAACCTAGGAGGAGCAGATCATCGCAGCCAAAGGCCAGAGGGGCTCTGGTGGCATCTGGTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp TACTCAGCTCTTTGGGAGTGGACTTTCTCTCTTCCAAGGCTAAGATaGCGTCCTCAGGAGCCCGAGGCACCTCCCGCAGCTGCCTCACTC +
Preference number: 1 (lower is better)
Translates to: YSALWEWTFSLPRLR*RPQEPEAPPAAASL
Trigger: GAGTGAGGCAGCTGCGGGAGGTGCCTCGGGCTCCTGAGGACGTCATCTTAGCCTTGGAAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 90 bp CTATATAAGGAGTGGAACAGCACTGCTAACCCAGTGCTGAGAGGCTaGCAAGCTGCGCTCTCCCACTGCTCCCTGCCCTGGGTGAACAGT +
Preference number: 1 (lower is better)
Translates to: LYKEWNSTANPVLRG*QAALSHCSLPWVNS
Trigger: ACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTGGCAGCCTCTCAGCACTGGGTTAGCAGTGCTGTTCCACTCCTTATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp TCAAGCCCACACAGGGCACTCTCTTGGGGGCTGTGGGCCACGTCTTaGCCACTACTCAGCTCTTTGGGAGTGGACTTTCTCTCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: SSPHRALSWGLWATS*PLLSSLGVDFLSSK
Trigger: CTTGGAAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGTGGGCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 90 bp CTTTCCTCATCCCTTTCATCCTCCGTGGCCTCGGGAGTCTCCTCCTaGCACAGTAACTTCTGGCTGAGGCAATGGCCTCCATCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: LSSSLSSSVASGVSS*HSNFWLRQWPPSAA
Trigger: TGCTGCTGATGGAGGCCATTGCCTCAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGCCACGGAGGATGAAAGGGATGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 90 bp CAAGCTGCGCTCTCCCACTGCTCCCTGCCCTGGGTGAACAGTACCTaGAGTACAAGCTTGCCCTCCTCTGAGCTTACTTCCAAGCCACTT +
Preference number: 1 (lower is better)
Translates to: QAALSHCSLPWVNST*STSLPSSELTSKPL
Trigger: AAGTGGCTTGGAAGTAAGCTCAGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CTCCAGAGGCCGAAGCCCAGTCAAACTGGTGCCCTATATAAGGAGTaGAACAGCACTGCTAACCCAGTGCTGAGAGGCTGCCAAGCTGCG +
Preference number: 1 (lower is better)
Translates to: LQRPKPSQTGALYKE*NSTANPVLRGCQAA
Trigger: CGCAGCTTGGCAGCCTCTCAGCACTGGGTTAGCAGTGCTGTTCCACTCCTTATATAGGGCACCAGTTTGACTGGGCTTCGGCCTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GGAGTCACACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTaGAGATGTGCTGAGATAGGGAAGGTCCTCTCAAGGCAGAGGGCT +
Preference number: 1 (lower is better)
Translates to: GVTQCDSRGSWITQG*RCAEIGKVLSRQRA
Trigger: AGCCCTCTGCCTTGAGAGGACCTTCCCTATCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GCATATAACGAGCAGGCTTTTTGCTGGGACAGAAGTGGCAGTGGCTaGCCTCGGGCAGGGTGGGTACTGGTCATTCTGATTTCCACAGCT +
Preference number: 1 (lower is better)
Translates to: AYNEQAFCWDRSGSG*PRAGWVLVILISTA
Trigger: AGCTGTGGAAATCAGAATGACCAGTACCCACCCTGCCCGAGGCCAGCCACTGCCACTTCTGTCCCAGCAAAAAGCCTGCTCGTTATATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp AGCCCAGAAACTGCGCAAGTGGTGGCAGGAGAACCAGGAGTTAAGTaGCTGCCTTGGCTACCTCAAAAGTTCGAGGCCAGCCTGAATGAA +
Preference number: 1 (lower is better)
Translates to: SPETAQVVAGEPGVK*LPWLPQKFEASLNE
Trigger: TTCATTCAGGCTGGCCTCGAACTTTTGAGGTAGCCAAGGCAGGCACTTAACTCCTGGTTCTCCTGCCACCACTTGCGCAGTTTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp GCTATGAAGACAGACAGCATCTCTCTCACACAACTCCCTCTGCCCTaGACTCACAATGGAGGCAAGAGCAACTCTGACCTCAGCCTGCCT +
Preference number: 1 (lower is better)
Translates to: AMKTDSISLTQLPLP*THNGGKSNSDLSLP
Trigger: AGGCAGGCTGAGGTCAGAGTTGCTCTTGCCTCCATTGTGAGTTCAGGGCAGAGGGAGTTGTGTGAGAGAGATGCTGTCTGTCTTCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp ATCTTGAAGGCAGCCATGAGCAGGACCTCCACTGGAGAACACTGTTaGCCTTGTCACCAAGCAACCCTTGGTGACAGACACTTTCTAGGC +
Preference number: 1 (lower is better)
Translates to: ILKAAMSRTSTGEHC*PCHQATLGDRHFLG
Trigger: GCCTAGAAAGTGTCTGTCACCAAGGGTTGCTTGGTGACAAGGGCAACAGTGTTCTCCAGTGGAGGTCCTGCTCATGGCTGCCTTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CAGGGCTTATCGGCCACAAGCTACCTTGAGGTTCCACTTCCAGGTTaGGAATGGGCAGGGGAGGGAGTCAAAGAATACAGTGTACATATC +
Preference number: 1 (lower is better)
Translates to: QGLSATSYLEVPLPG*EWAGEGVKEYSVHI
Trigger: GATATGTACACTGTATTCTTTGACTCCCTCCCCTGCCCATTCCCAACCTGGAAGTGGAACCTCAAGGTAGCTTGTGGCCGATAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp TATCTGTATGGGGTCCAGAGTCCCTGCAAGTCTCCCGGAAGTGAGTaGACAAGGAAAGAAAGCACACATGCGTACGCACACACCATTGCT +
Preference number: 1 (lower is better)
Translates to: YLYGVQSPCKSPGSE*TRKESTHAYAHTIA
Trigger: AGCAATGGTGTGTGCGTACGCATGTGTGCTTTCTTTCCTTGTCCACTCACTTCCGGGAGACTTGCAGGGACTCTGGACCCCATACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp AGGCTAGCTCCTTTCTGGGAACCAGCTCGCTCAATTCTGTTTCCTTaGGAAAGCAGATATCTTGAAGGCAGCCATGAGCAGGACCTCCAC +
Preference number: 1 (lower is better)
Translates to: RLAPFWEPARSILFP*ESRYLEGSHEQDLH
Trigger: GTGGAGGTCCTGCTCATGGCTGCCTTCAAGATATCTGCTTTCTCAAGGAAACAGAATTGAGCGAGCTGGTTCCCAGAAAGGAGCTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp AATAGCTCTCTGGGGCTGGAGAGATGGTGCAGAGAGAGCTACTTTTaGACAGGACTGAGTTTAGTTCCTAGCATGCATGTCCTGCAGCTC +
Preference number: 1 (lower is better)
Translates to: NSSLGLERWCRESYF*TGLSLVPSMHVLQL
Trigger: GAGCTGCAGGACATGCATGCTAGGAACTAAACTCAGTCCTGTGCAAAAGTAGCTCTCTCTGCACCATCTCTCCAGCCCCAGAGAGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp AGTGAAAGGCTGGAGATGTGGTGGCCAGTCTTGGAGGAAGTGTCTTaGAGGGGAAGGTTGCCTCTGCTTTGTTCTCTGAGGTATCATTGT +
Preference number: 1 (lower is better)
Translates to: SERLEMWWPVLEEVS*RGRLPLLCSLRYHC
Trigger: ACAATGATACCTCAGAGAACAAAGCAGAGGCAACCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GTGTACATATCTATCCCCTGCCTGTCCTGTGCCCGTCCCCACTGGTaGCTTTACATGGCACTTTATTGGCCATTTCTGAAGACACTCTGT +
Preference number: 1 (lower is better)
Translates to: VYISIPCLSCARPHW*LYMALYWPFLKTLC
Trigger: ACAGAGTGTCTTCAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGGCACAGGACAGGCAGGGGATAGATATGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp ACAGTGTACATATCTATCCCCTGCCTGTCCTGTGCCCGTCCCCACTaGTGGCTTTACATGGCACTTTATTGGCCATTTCTGAAGACACTC +
Preference number: 1 (lower is better)
Translates to: TVYISIPCLSCARPH*WLYMALYWPFLKTL
Trigger: GAGTGTCTTCAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGGCACAGGACAGGCAGGGGATAGATATGTACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp TACCTTGCTCTCCTGTTCACTTTCCCTGTTGCTAAGGAACACCCATaGTCTTCTATCTCCCAAGGAGAGCCTAGAGGCCCTGAGCTTTCT +
Preference number: 1 (lower is better)
Translates to: YLALLFTFPVAKEHP*SSISQGEPRGPELS
Trigger: AGAAAGCTCAGGGCCTCTAGGCTCTCCTTGGGAGATAGAAGATCATGGGTGTTCCTTAGCAACAGGGAAAGTGAACAGGAGAGCAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp TTATCGGCCACAAGCTACCTTGAGGTTCCACTTCCAGGTTGGGAATaGGCAGGGGAGGGAGTCAAAGAATACAGTGTACATATCTATCCC +
Preference number: 1 (lower is better)
Translates to: LSATSYLEVPLPGWE*AGEGVKEYSVHIYP
Trigger: GGGATAGATATGTACACTGTATTCTTTGACTCCCTCCCCTGCCCATTCCCAACCTGGAAGTGGAACCTCAAGGTAGCTTGTGGCCGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp CCCCGTGTGGTTCCAGAAGAAAAGTGCTGCAAGTTAAGAAAGCTATaGAGACAGACAGCATCTCTCTCACACAACTCCCTCTGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: PRVVPEEKCCKLRKL*RQTASLSHNSLCPE
Trigger: TTCAGGGCAGAGGGAGTTGTGTGAGAGAGATGCTGTCTGTCTTCATAGCTTTCTTAACTTGCAGCACTTTTCTTCTGGAACCACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp GCCTGGAACTTCAGCTCCAGGGGATCTGATGCCTCTGCAAGCACCTaGACTCACATACACATACTCCCAAATAGACATAATTACTGGATG +
Preference number: 1 (lower is better)
Translates to: AWNFSSRGSDASAST*THIHILPNRHNYWM
Trigger: CATCCAGTAATTATGTCTATTTGGGAGTATGTGTATGTGAGTGCAGGTGCTTGCAGAGGCATCAGATCCCCTGGAGCTGAAGTTCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp AGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTaGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAA +
Preference number: 1 (lower is better)
Translates to: SVCYPRPFPVGKVRG*NSLPWKLQANLTLK
Trigger: TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp CAGCAGCCACGCAGGGATACGACAACACCTAATAGGGTGACTACATaGGACAATCTCTATGGAAGATGTACTACCAATGGTCAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: QQPRRDTTTPNRVTT*DNLYGRCTTNGQFL
Trigger: CAGGAACTGACCATTGGTAGTACATCTTCCATAGAGATTGTCTCATGTAGTCACCCTATTAGGTGTTGTCGTATCCCTGCGTGGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp GTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAACCCAATaGATTTCAACCACGGCATCGCCAGCTTCCTTCTTAATGTTGACT +
Preference number: 1 (lower is better)
Translates to: VQSWFIKSLFWPSTQ*ISTTASPASFLMLT
Trigger: AGTCAACATTAAGAAGGAAGCTGGCGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 90 bp AAAGCAACAACAGGGGCTAGGGAGATGGCTAGTTGGCTAAGAGTATaGATTATTCTTGCAGAGACCCAAGTTTGGTTCCCAGCACCCATA +
Preference number: 1 (lower is better)
Translates to: KATTGAREMASWLRV*IILAETQVWFPAPI
Trigger: TATGGGTGCTGGGAACCAAACTTGGGTCTCTGCAAGAATAATTCATACTCTTAGCCAACTAGCCATCTCCCTAGCCCCTGTTGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp GTTGCTTTCAGCAGCCACGCAGGGATACGACAACACCTAATAGGGTaGCTACATGAGACAATCTCTATGGAAGATGTACTACCAATGGTC +
Preference number: 1 (lower is better)
Translates to: VAFSSHAGIRQHLIG*LHETISMEDVLPMV
Trigger: GACCATTGGTAGTACATCTTCCATAGAGATTGTCTCATGTAGTCACCCTATTAGGTGTTGTCGTATCCCTGCGTGGCTGCTGAAAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GCATGGGACTTTCACATCTTTCCACACCTGGCCAGTTACTCCTATTaGACCACAGCAGCTTTGATTTCCATCATGAAATGGAAGGGTTTG +
Preference number: 1 (lower is better)
Translates to: AWDFHIFPHLASYSY*TTAALISIMKWKGL
Trigger: CAAACCCTTCCATTTCATGATGGAAATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGCCAGGTGTGGAAAGATGTGAAAGTCCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CTCTATTGCTCTGAGTACCCTGAGCCAGGCATTTTAACACTACAGTaGTACCCACACAAGGCACATGGGATGATTAGCACCTTTCAAAAC +
Preference number: 1 (lower is better)
Translates to: LYCSEYPEPGILTLQ*YPHKAHGMISTFQN
Trigger: GTTTTGAAAGGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCCTGGCTCAGGGTACTCAGAGCAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp ACGTACTCAAGTCCTGTTGTGTCTTTTCTAGCTGCTGAGGATGTCTaGGTCAGGAGGGCAACAGGATCTTCTATCACTTTTTCATGCAGA +
Preference number: 1 (lower is better)
Translates to: TYSSPVVSFLAAEDV*VRRATGSSITFSCR
Trigger: TCTGCATGAAAAAGTGATAGAAGATCCTGTTGCCCTCCTGACCCAGACATCCTCAGCAGCTAGAAAAGACACAACAGGACTTGAGTACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp CTGCATTTCTTTCCCAGCATACAGCTATACCACCTGTTTTTGTTGTaGGGGAAACACAGGTTCTCCTGTGTCCTTCTAGGGATATCAGAC +
Preference number: 1 (lower is better)
Translates to: LHFFPSIQLYHLFLL*GKHRFSCVLLGISD
Trigger: GTCTGATATCCCTAGAAGGACACAGGAGAACCTGTGTTTCCCTCACAACAAAAACAGGTGGTATAGCTGTATGCTGGGAAAGAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 90 bp TATATGACCAGACCCTCAGATGTCCCTTTAAAATGTCTTCAATGTTaGCAGGTGGTGGCGGCACATACCTTTAATTCCAGCACTGAGATG +
Preference number: 1 (lower is better)
Translates to: YMTRPSDVPLKCLQC*QVVAAHTFNSSTEM
Trigger: CATCTCAGTGCTGGAATTAAAGGTATGTGCCGCCACCACCTGGCAACATTGAAGACATTTTAAAGGGACATCTGAGGGTCTGGTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp GATGTCTGGGTCAGGAGGGCAACAGGATCTTCTATCACTTTTTCATaGAGATTTCCAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAAT +
Preference number: 1 (lower is better)
Translates to: DVWVRRATGSSITFS*RFPTPSFCLVLFLN
Trigger: ATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTGGAAATCTGCATGAAAAAGTGATAGAAGATCCTGTTGCCCTCCTGACCCAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp AATCTTAAATATGAAAACTTGATAAGTGAAAGGCTGGAGATGTGGTaGCCAGTCTTGGAGGAAGTGTCTTGGAGGGGAAGGTTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: NLKYENLISERLEMW*PVLEEVSWRGRLPL
Trigger: CAGAGGCAACCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAAGTTTTCATATTTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CGTTTCCAAAACACACCAAACAACATCGAAGAAATGAAGTGTGTTTaGGGCTGGGCTACCCTGAACCCAAGTCTTAAAGGCATCAGGATA +
Preference number: 1 (lower is better)
Translates to: RFQNTPNNIEEMKCV*GWATLNPSLKGIRI
Trigger: TATCCTGATGCCTTTAAGACTTGGGTTCAGGGTAGCCCAGCCCCAAACACACTTCATTTCTTCGATGTTGTTTGGTGTGTTTTGGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GCTGTTTTAGTTTCCTGTTCCAATGGGTGGAGCCAGGGCATAAGTTaGCAAGCACATTCACTCAAGGGAAAGTCTAGTTTGATGTTTCAG +
Preference number: 1 (lower is better)
Translates to: AVLVSCSNGWSQGIS*QAHSLKGKSSLMFQ
Trigger: CTGAAACATCAAACTAGACTTTCCCTTGAGTGAATGTGCTTGCCAACTTATGCCCTGGCTCCACCCATTGGAACAGGAAACTAAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp GAAGATTCCAGTCTACACCACACCAATACCTGTTTTCTATTGTTCTaGGGATGGAACTCGGGGCCTACAAACATTGATGAACGTTCTACC +
Preference number: 1 (lower is better)
Translates to: EDSSLHHTNTCFLLF*GWNSGPTNIDERST
Trigger: GGTAGAACGTTCATCAATGTTTGTAGGCCCCGAGTTCCATCCTCAGAACAATAGAAAACAGGTATTGGTGTGGTGTAGACTGGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp CTATCACTTTTTCATGCAGATTTCCAACGCCTTCCTTCTGTCTTGTaGTATTCCTCAATGCCTACTGCTCATTCCATAGCAAGCCTTCCT +
Preference number: 1 (lower is better)
Translates to: LSLFHADFQRLPSVL*YSSMPTAHSIASLP
Trigger: AGGAAGGCTTGCTATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTGGAAATCTGCATGAAAAAGTGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp GATCTGCAGAACCCTGGCATTCCCATTAGAAATGTGTTTCACATATaGTTACTCTGGGCACAGTATTGTCCAATGTTAGCAGATGAGCAG +
Preference number: 1 (lower is better)
Translates to: DLQNPGIPIRNVFHI*LLWAQYCPMLADEQ
Trigger: CTGCTCATCTGCTAACATTGGACAATACTGTGCCCAGAGTAACCATATGTGAAACACATTTCTAATGGGAATGCCAGGGTTCTGCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CTAAATCTTAAATATGAAAACTTGATAAGTGAAAGGCTGGAGATGTaGTGGCCAGTCTTGGAGGAAGTGTCTTGGAGGGGAAGGTTGCCT +
Preference number: 1 (lower is better)
Translates to: LNLKYENLISERLEM*WPVLEEVSWRGRLP
Trigger: AGGCAACCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAAGTTTTCATATTTAAGATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp CAAAACACACCAAACAACATCGAAGAAATGAAGTGTGTTTGGGGCTaGGCTACCCTGAACCCAAGTCTTAAAGGCATCAGGATAATCGTA +
Preference number: 1 (lower is better)
Translates to: QNTPNNIEEMKCVWG*ATLNPSLKGIRIIV
Trigger: TACGATTATCCTGATGCCTTTAAGACTTGGGTTCAGGGTAGCCCAGCCCCAAACACACTTCATTTCTTCGATGTTGTTTGGTGTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp ATTTCTATATTTGGTGCTAGAGCCCAGCCTTTAGCTTCTTGGACCTaGGTTCAAATCCTGCTTCTGTGCCTTGGCTCAGTCAATAACATT +
Preference number: 1 (lower is better)
Translates to: ISIFGARAQPLASWT*VQILLLCLGSVNNI
Trigger: AATGTTATTGACTGAGCCAAGGCACAGAAGCAGGATTTGAACTCAGGTCCAAGAAGCTAAAGGCTGGGCTCTAGCACCAAATATAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp CCCGTCCCCACTGGTGGCTTTACATGGCACTTTATTGGCCATTTCTaGAGACACTCTGTGATAACTGCACTATTAAACAGATCCTTAAAA +
Preference number: 1 (lower is better)
Translates to: PVPTGGFTWHFIGHF*RHSVITALLNRSLK
Trigger: TTTTAAGGATCTGTTTAATAGTGCAGTTATCACAGAGTGTCTTCAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp GTTACAAAACAATGCTGTCGGTGGGTTGGTGGGTACACTTTATTGTaGCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: VTKQCCRWVGGYTLL*LSYISEFCLFNSGS
Trigger: AGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACCCACCAACCCACCGACAGCATTGTTTTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 90 bp TTGTACACTCACATCAGGAAGAATTCATTTTGTTGTTCTCCATATTaGATACAGCAAGAGACAATGCAACTACTCCAGGCACTGCAGGCT +
Preference number: 1 (lower is better)
Translates to: LYTHIRKNSFCCSPY*IQQETMQLLQALQA
Trigger: AGCCTGCAGTGCCTGGAGTAGTTGCATTGTCTCTTGCTGTATCCAATATGGAGAACAACAAAATGAATTCTTCCTGATGTGAGTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 90 bp AGGAAAAGGCTAACTTCTTCTCTTCCACAGGGAATTCGCTTATGTTaGACCTTCAGATCAGTCAGGATCTTTTCTATCCATGTTGTTACA +
Preference number: 1 (lower is better)
Translates to: RKRLTSSLPQGIRLC*TFRSVRIFSIHVVT
Trigger: TGTAACAACATGGATAGAAAAGATCCTGACTGATCTGAAGGTGCAACATAAGCGAATTCCCTGTGGAAGAGAAGAAGTTAGCCTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 90 bp GTTGGTGGGTACACTTTATTGTGCCTCAGCTACATCTCAGAGTTTTaGTTATTCAACTCTGGTTCTGAAATAGGCAATGTCAGAATAGTG +
Preference number: 1 (lower is better)
Translates to: VGGYTLLCLSYISEF*LFNSGSEIGNVRIV
Trigger: CACTATTCTGACATTGCCTATTTCAGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACCCACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp TTATTTATTAAATATCTGCCAGGTTCTCTGGCACTTAACTGCCACTaGGCTCAGAGATCCCAGGATTTCATTAAGGAAACTAGATTTGAC +
Preference number: 1 (lower is better)
Translates to: LFIKYLPGSLALNCH*AQRSQDFIKETRFD
Trigger: GTCAAATCTAGTTTCCTTAATGAAATCCTGGGATCTCTGAGCTCAGTGGCAGTTAAGTGCCAGAGAACCTGGCAGATATTTAATAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp AGGCAAAGGCCAATTGTTCTATTAATGAACATGACAAGACTTTACTaGGGAGATGGCCATTCAGCAAATGAAATCTTCAGAGCAACAAAC +
Preference number: 1 (lower is better)
Translates to: RQRPIVLLMNMTRLY*GDGHSANEIFRATN
Trigger: GTTTGTTGCTCTGAAGATTTCATTTGCTGAATGGCCATCTCCTCAGTAAAGTCTTGTCATGTTCATTAATAGAACAATTGGCCTTTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 90 bp AATGAACATGACAAGACTTTACTGAGGAGATGGCCATTCAGCAAATaGAATCTTCAGAGCAACAAACTCCCTAAAAACAATGTAAACACA +
Preference number: 1 (lower is better)
Translates to: NEHDKTLLRRWPFSK*NLQSNKLPKNNVNT
Trigger: TGTGTTTACATTGTTTTTAGGGAGTTTGTTGCTCTGAAGATTTCATTTGCTGAATGGCCATCTCCTCAGTAAAGTCTTGTCATGTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp AGCAGCCTCGCCGCCCGGCACATCAAGCCCACACAGGGCACTCTCTaGGGGGCTGTGGGCCACGTCTTGGCCACTACTCAGCTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: SSLAARHIKPTQGTL*GAVGHVLATTQLFG
Trigger: CCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGTGGGCTTGATGTGCCGGGCGGCGAGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR TCA 90 bp GGTGACAGACACTTTCTAGGCAGCCCTGACCCACACCAGATGCCACCAGAGCCCCTCATGGACCAGTGGTaGAATTCTGCTGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GDRHFLGSPDPHQMPPEPLMDQW*NSAGLP
Trigger: TGGGAGGCCAGCAGAATTTCACCACTGGTCCATGAG...GGGCTCTGGTGGCATCTGGTGTGGGTCAGGGCTGCCTAGAAAGTGTCTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGATTGCTGGGACAGAAGTaGCAGTGGCTGGCCTCGGGC +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRLLGQK*QWLASG
Trigger: GCCCGAGGCCAGCCACTGCCACTTCTGTCCCAGCAA...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAACTCTGACCTCAGCCTaGCTTCCACTCCCCACATGC +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRTLTSA*LPLPTC
Trigger: GCATGTGGGGAGTGGAAGGCAGGCTGAGGTCAGAGT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp CTCTCTTGGGGGCTGTGGGCCACGTCTTGGCCACTACTCAGCTCTTaGGGAGTGGACTTTCTCTCTTCCAAGGCTAAGATGACGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LSWGLWATSWPLLSS*GVDFLSSKAKMTSS
Trigger: TGAGGACGTCATCTTAGCCTTGGAAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR TCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACGGCCTTTGGCTGCGATaGTCTGCTCCTCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDGLWLR*SAPPRF
Trigger: AAACCTAGGAGGAGCAGATCATCGCAGCCAAAGGCC...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CACTGCTCCCTGCCCTGGGTGAACAGTACCTGGAGTACAAGCTTGCCCTCCTCTTGTTTTCTATTGTTCTaGGGATGGAACTCGGGGCCT +
Preference number: 2 (lower is better)
Translates to: HCSLPWVNSTWSTSLPSSCFLLF*GWNSGP
Trigger: AGGCCCCGAGTTCCATCCTCAGAACAATAGAAAACA...AGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp GTAAGGGGGTGGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAAGAGAGGCTGCCAAGCTaGGCTCTCCCACTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VRGWNSLPWKLQANLTLKERLPS*ALPLLP
Trigger: AGGGAGCAGTGGGAGAGCGCAGCTTGGCAGCCTCTC...TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACATCCCAGCAACCACATaGTGGCTCACAGCCATCCGT +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDIPATT*WLTAIR
Trigger: ACGGATGGCTGTGAGCCACCATGTGGTTGCTGGGAT...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp TCTGTAGCACAGGCTGCCCTTACACCCATAGCCATCTTCCTGCCTTaGCCTCCAAGTAGTGGGGTTACAAGTGCCACAGAGCACATCCAA +
Preference number: 2 (lower is better)
Translates to: SVAQAALTPIAIFLP*PPSSGVTSATEHIQ
Trigger: TTGGATGTGCTCTGTGGCACTTGTAACCCCACTACTTGGAGGCAAAGGCAGGAAGATGGCTATGGGTGTAAGGGCAGCCTGTGCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAAGTTCGAGGCCAGCCTaGATGAATGAGACCCTGTTT +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRSSRPA*MNETLF
Trigger: AAACAGGGTCTCATTCATTCAGGCTGGCCTCGAACT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGAAGCTTGCCCTCCTCTaGGCTTACTTCCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWKLALL*AYFQAT
Trigger: AGTGGCTTGGAAGTAAGCTCAGAGGAGGGCAAGCTT...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGCGCTGGGTTGGAGAATaGTCCCAGAGCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGERWVGE*SQSQPS
Trigger: AGATGGCTGGCTCTGGGATCATTCTCCAACCCAGCG...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGCAGGTAGCTCACAGTTaGCTGGAACTTCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWQVAHS*LELQLQ
Trigger: CTGGAGCTGAAGTTCCAGGCAACTGTGAGCTACCTG...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CACTGCTCCCTGCCCTGGGTGAACAGTACCTGGAGTACAAGCTTGCCCTCCTCTCTATCTTACCAGTCCTaGAGCATTGAGCTTTTGACC +
Preference number: 2 (lower is better)
Translates to: HCSLPWVNSTWSTSLPSSLSYQS*SIELLT
Trigger: GGTCAAAAGCTCAATGCTCCAGGACTGGTAAGATAG...AGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACCTGGGGCTGGAGAGATaGTGCAGAGAGAGCTACTTT +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDLGLER*CRESYF
Trigger: AAAGTAGCTCTCTCTGCACCATCTCTCCAGCCCCAG...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGCTGTCTTCTCTGGAGTaGAAGCTGTGGGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGELSSLE*KLWVPG
Trigger: CCCTGGCACCCACAGCTTCCACTCCAGAGAAGACAG...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGCCTCTGGCCTTTGGCTaGGATGATCTGCTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEPLAFG*DDLLLL
Trigger: TAGGAGGAGCAGATCATCGCAGCCAAAGGCCAGAGG...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGACTGGAGAACACTGTTaGCCTTGTCACCAAGCAACC +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWTGEHC*PCHQAT
Trigger: GGTTGCTTGGTGACAAGGGCAACAGTGTTCTCCAGT...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGCTTCCAAGCCACTTCTaGCAAGTGCAGCTGAACTTC +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWLPSHF*QVQLNF
Trigger: GAAGTTCAGCTGCACTTGGCAGAAGTGGCTTGGAAG...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGGAGCAGGACCTCCACTaGAGAACACTGTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEEQDLH*RTLLPL
Trigger: CAAGGGCAACAGTGTTCTCCAGTGGAGGTCCTGCTC...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACCAGGGGGAAGGGTTGTaGGAAGAAAACATGCTCCTA +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDQGEGL*EENMLL
Trigger: TAGGAGCATGTTTTCTTCCCACAACCCTTCCCCCTG...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACCAAAGAGTTTCTCCTTaGGCCTACAACCATACAGGG +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDQRVSP*AYNHTG
Trigger: CCCTGTATGGTTGTAGGCTCAAGGAGAAACTCTTTG...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGGAATTCAGGGCCCTGTaGATGCTAGGCAAATGTTCT +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWEFRAL*MLGKCS
Trigger: AGAACATTTGCCTAGCATGCACAGGGCCCTGAATTC...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACTCTAACCTACTTCCCTaGACTTCCTCACTGCATGTC +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDSNLLP*TSSLHV
Trigger: GACATGCAGTGAGGAAGTGCAGGGAAGTAGGTTAGA...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CAGCATACAGCTATACCACCTGTTTTTGTTGTGAGGGAAACACAGGTTCTCCTGCAGACCAGGAGCTCATaGGTGGGGACAGTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: QHTAIPPVFVVRETQVLLQTRSS*VGTVLV
Trigger: CACAAGGACTGTCCCCACCCATGAGCTCCTGGTCTG...CAGGAGAACCTGTGTTTCCCTCACAACAAAAACAGGTGGTATAGCTGTATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp GTAAGGGGGTGGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAAGCCAAGTCCCCCAGCTaGGAATACCTGGCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: VRGWNSLPWKLQANLTLKAKSPS*EYLAFL
Trigger: AAGGAAAGCCAGGTATTCCCAGCTGGGGGACTTGGC...TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp TCTTCTATCTCCCAAGGAGAGCCTAGAGGCCCTGAGCTTTCTTGCTaGGACTCAGACAGCCAGATAGCCTATATCCCAAAGACATACGAG +
Preference number: 2 (lower is better)
Translates to: SSISQGEPRGPELSC*DSDSQIAYIPKTYE
Trigger: CTCGTATGTCTTTGGGATATAGGCTATCTGGCTGTCTGAGTCCAAGCAAGAAAGCTCAGGGCCTCTAGGCTCTCCTTGGGAGATAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGTTAGCTTCTTGGACCTaGGTTCAAATCCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWLASWT*VQILLL
Trigger: CAGAAGCAGGATTTGAACTCAGGTCCAAGAAGCTAA...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGTGTTGTGTCTACACCTaGTCTTTCTGCATCATCAGG +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWCCVYT*SFCIIR
Trigger: CCTGATGATGCAGAAAGAGCAGGTGTAGACACAACA...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CCCGAGGCACCTCCCGCAGCTGCCTCACTCGCTCTCTTCTCTTCCGCCTTAAATAGCTGTAAACTGTCATaGATGATCCTTTTGACAAAT +
Preference number: 2 (lower is better)
Translates to: PEAPPAAASLALFSSALNSCKLS*MILLTN
Trigger: ATTTGTCAAAAGGATCATCCATGACAGTTTACAGCT...ATTTAAGGCGGAAGAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCCTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGATCAGAGTTGCCAACTTaGTCTCAAAGTACAGCAAAG +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRSELPT*SQSTAK
Trigger: CTTTGCTGTACTTTGAGACCAAGTTGGCAACTCTGA...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAACACTAACAAAGGCATaGGTTAAATCCCCAGAACCA +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRTLTKA*VKSPEP
Trigger: TGGTTCTGGGGATTTAACCCATGCCTTTGTTAGTGT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp GTAAGGGGGTGGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAAGAAAGGCTGGAGATGTaGTGGCCAGTCTTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: VRGWNSLPWKLQANLTLKERLEM*WPVLEE
Trigger: TTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTC...TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TGGCCCTCAACCCAATGCATTTCAACCACGGCATCGCCAGCTTCCTTCTTAATGGAGGTGACGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 2 (lower is better)
Translates to: WPSTQCISTTASPASFLMEVTVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCGTCACCTC...CATTAAGAAGGAAGCTGGCGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR TCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAACTGTTTTAGTCATTTaGGTGAGTCACAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRTVLVI*VSHSRS
Trigger: AGATCTGCTGTGACTCACTCAAATGACTAAAACAGT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAAAATACAAGGCTCTGTaGAGATTTGGTGGCATAAGT +
Preference number: 2 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRKYKAL*RFGGIS
Trigger: ACTTATGCCACCAAATCTTCACAGAGCCTTGTATTT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGTTTAGAATAGCTCTCTaGGGCTGGAGAGATGGTGCA +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEFRIAL*GWRDGA
Trigger: TGCACCATCTCTCCAGCCCCAGAGAGCTATTCTAAA...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCACTGGAGTGGAAGCTGTaGGTGCCAGGGGGTGAAAGA +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSLEWKL*VPGGER
Trigger: TCTTTCACCCCCTGGCACCCACAGCTTCCACTCCAG...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp TGTCCGACCCTGACAAAACTCTGTGAAGGTGACTTTAGGAACCCCTaGGATTCTAAGCTCTTCCTTCAGTGGAGCCAGACTGCATTTCTT +
Preference number: 2 (lower is better)
Translates to: CPTLTKLCEGDFRNP*DSKLFLQWSQTAFL
Trigger: AAGAAATGCAGTCTGGCTCCACTGAAGGAAGAGCTTAGAATCCAAGGGGTTCCTAAAGTCACCTTCACAGAGTTTTGTCAGGGTCGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CAA 90 bp TATGAAAACTTGATAAGTGAAAGGCTGGAGATGTGGTGGCCAGTCTaGGAGGAAGTGTCTTGGAGGGGAAGGTTGCCTCTGCTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: YENLISERLEMWWPV*EEVSWRGRLPLLCS
Trigger: AGAACAAAGCAGAGGCAACCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAAGTTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACAAGTATAGCCACCTCTaGAAATGGAGCTTAACTACT +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDKYSHL*KWSLTT
Trigger: AGTAGTTAAGCTCCATTTTCAGAGGTGGCTATACTT...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGAAGTTAAGAAAGCTATaGAGACAGACAGCATCTCTC +
Preference number: 2 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWKLRKL*RQTASL
Trigger: GAGAGATGCTGTCTGTCTTCATAGCTTTCTTAACTT...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGACAAGGCACATGGGATaGTTAGCACCTTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGETRHMG*LAPFKT
Trigger: GGTTTTGAAAGGTGCTAATCATCCCATGTGCCTTGT...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp TTCATCAAATCCCTATTCTGGCCCTCAACCCAATGCATTTCAACCACGGCATCGTCAGTGGAGCCAGACTaGATTTCTTTCCCAGCATAC +
Preference number: 2 (lower is better)
Translates to: FIKSLFWPSTQCISTTASSVEPD*ISFPAY
Trigger: GTATGCTGGGAAAGAAATGCAGTCTGGCTCCACTGA...CGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR GCA 90 bp GGCATTTTAACACTACAGTGGTACCCACACAAGGCACATGGGATGATTAGCACCAAAATGGCCTTGGGCTaGCTTTGCATGGGACTTTCA +
Preference number: 2 (lower is better)
Translates to: GILTLQWYPHKAHGMISTKMALG*LCMGLS
Trigger: TGAAAGTCCCATGCAAAGGCAGCCCAAGGCCATTTT...GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp GGCATTTTAACACTACAGTGGTACCCACACAAGGCACATGGGATGATTAGCACCGTTAAGTGCCTGCCTTaGCTACCTCAAAAGTTCGAG +
Preference number: 2 (lower is better)
Translates to: GILTLQWYPHKAHGMISTVKCLP*LPQKFE
Trigger: CTCGAACTTTTGAGGTAGCCAAGGCAGGCACTTAAC...GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACGGAAGAAATCACAAGTaGAAGGAATCCTTGCAAAAG +
Preference number: 2 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDGRNHK*KESLQK
Trigger: CTTTTGCAAGGATTCCTTCCACTTGTGATTTCTTCC...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp GCTTATGTTGCACCTTCAGATCAGTCAGGATCTTTTCTATCCATGTaGTTACAACCACTATGCCTTCCGCTGTCTCGGAGCCCAAAGATG +
Preference number: 2 (lower is better)
Translates to: AYVAPSDQSGSFLSM*LQPLCLPLSRSPKM
Trigger: CATCTTTGGGCTCCGAGACAGCGGAAGGCATAGTGGTTGTAACAACATGGATAGAAAAGATCCTGACTGATCTGAAGGTGCAACATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CAA 90 bp TGGTCAGTTCCTGATCATTTCATGACACACAAGGTGGCTTTGCTCTaGGTCCATAAGCAGTACTCTACAGCTGCCTACCTACCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: WSVPDHFMTHKVALL*VHKQYSTAAYLPLK
Trigger: CTTTAAGGGTAGGTAGGCAGCTGTAGAGTACTGCTTATGGACCAAGAGCAAAGCCACCTTGTGTGTCATGAAATGATCAGGAACTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCAAGTCCCTGCTGTTTCTaGAGTCCCCTGCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSSPCCF*SPLLFL
Trigger: CAGAAACAGCAGGGGACTTCAGAAACAGCAGGGACT...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp ACGTACGTAAGTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAACCCAGTTTACAGAACTAGGTaGAGGTCTTCGAGAATTCCG +
Preference number: 2 (lower is better)
Translates to: TYVSAKLVHQIPILALNPVYRTR*RSSRIP
Trigger: CGGAATTCTCGAAGACCTCCACCTAGTTCTGTAAAC...TGGGTTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCACTTACGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp CTACTCAGCTCTTTGGGAGTGGACTTTCTCTCTTCCAAGGCTAAGATGACGTCCTGGGGACAGTCCTTGTaGCTTCTGCACTTTAAATTT +
Preference number: 2 (lower is better)
Translates to: LLSSLGVDFLSSKAKMTSWGQSL*LLHFKF
Trigger: AAATTTAAAGTGCAGAAGCCACAAGGACTGTCCCCA...GGACGTCATCTTAGCCTTGGAAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp TTCATCAAATCCCTATTCTGGCCCTCAACCCAATGCATTTCAACCACGGCATCGAAGCTCTTCCTTCAGTaGAGCCAGACTGCATTTCTT +
Preference number: 2 (lower is better)
Translates to: FIKSLFWPSTQCISTTASKLFLQ*SQTAFL
Trigger: AAGAAATGCAGTCTGGCTCCACTGAAGGAAGAGCTT...CGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp TTCATCAAATCCCTATTCTGGCCCTCAACCCAATGCATTTCAACCACGGCATCGCACTACTCAGCTCTTTaGGAGTGGACTTTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: FIKSLFWPSTQCISTTASHYSAL*EWTFSL
Trigger: AAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTG...CGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp GACCATAGCGATACTGCTCTTGTCAAACGTTTTCAAATTCTAGGAACATTATCTCCACCAGAGCCCCTCTaGCCTTTGGCTGCGATGATC +
Preference number: 2 (lower is better)
Translates to: DHSDTALVKRFQILGTLSPPEPL*PLAAMI
Trigger: GATCATCGCAGCCAAAGGCCAGAGGGGCTCTGGTGG...AGATAATGTTCCTAGAATTTGAAAACGTTTGACAAGAGCAGTATCGCTATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp GGCATTTTAACACTACAGTGGTACCCACACAAGGCACATGGGATGATTAGCACCGCCAGTTACTCCTATTaGACCACAGCAGCTTTGATT +
Preference number: 2 (lower is better)
Translates to: GILTLQWYPHKAHGMISTASYSY*TTAALI
Trigger: AATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGC...GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATACAAGTACTATCTGTATaGGGTCCAGAGTCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSIQVLSV*GPESLQ
Trigger: TTGCAGGGACTCTGGACCCCATACAGATAGTACTTG...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp TGCATGGGACTTTCACATCTTTCCACACCTGGCCAGTTACTCCTATaGGACCACAGCAGCTTTGATTTCCATCATGAAATGGAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: CMGLSHLSTPGQLLL*DHSSFDFHHEMEGF
Trigger: AAACCCTTCCATTTCATGATGGAAATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGCCAGGTGTGGAAAGATGTGAAAGTCCCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGTGGCCATTCAGCAAATaGAATCTTCAGAGCAACAAA +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEWPFSK*NLQSNK
Trigger: TTTGTTGCTCTGAAGATTTCATTTGCTGAATGGCCA...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATAGGAGAGGACACAAGTTaGAATGTCATCGTGTCTGAA +
Preference number: 2 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSIGEDTS*NVIVSE
Trigger: TTCAGACACGATGACATTTCAACTTGTGTCCTCTCC...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCAGTTGGGAGAACATTTaGCTAGCACACAGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTSWENI*LAHRSP
Trigger: GGGACTTCTGTGTGCTAGGCAAATGTTCTCCCAACT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCAGGCTGTACAGGACTTaGCCTACACTAACAAAGGCA +
Preference number: 2 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTRLYRT*PTLTKA
Trigger: TGCCTTTGTTAGTGTAGGGCAAGTCCTGTACAGCCT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp GGCAGCATTAGTTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCCTGTCGGTGGGTTGGTaGGTACACTTTATTGTGCCT +
Preference number: 2 (lower is better)
Translates to: GSISCSNQQLKKRTTVLVLSVGW*VHFIVP
Trigger: AGGCACAATAAAGTGTACCCACCAACCCACCGACAG...GACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAACTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp GGCAGCATTAGTTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCATCTGCCAGGTTCTCTaGCACTTAACTGCCACTGAG +
Preference number: 2 (lower is better)
Translates to: GSISCSNQQLKKRTTVLVICQVL*HLTATE
Trigger: CTCAGTGGCAGTTAAGTGCCAGAGAACCTGGCAGAT...GACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAACTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGTCTACTCCAGAGCAATaGAGGATTCTACTCACAAAA +
Preference number: 2 (lower is better)
Translates to: FLINQGFWKFRSGQWGGESTPEQ*RILLTK
Trigger: TTTTGTGAGTAGAATCCTCCATTGCTCTGGAGTAGA...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCATTCCCCTTCCCAAACTaGTACAGCTTACGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSFPFPN*YSLRPP
Trigger: AGGAGGACGTAAGCTGTACCAGTTTGGGAAGGGGAA...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp CTAAAGTTTGTAAACAGCATGCAAGGGTCACTGCTGACCCTGACCTaGTACCATAAAGAGACAAAGAGTTTCTCCTTGAGCCTACAACCA +
Preference number: 2 (lower is better)
Translates to: LKFVNSMQGSLLTLT*YHKETKSFSLSLQP
Trigger: TGGTTGTAGGCTCAAGGAGAAACTCTTTGTCTCTTTATGGTACAAGGTCAGGGTCAGCAGTGACCCTTGCATGCTGTTTACAAACTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TTCATCAAATCCCTATTCTGGCCCTCAACCCAATGCATTTCAACCACGGCATCGAAATTTCCCACTCTTTaGAAGTCAGTACTCGTAACC +
Preference number: 2 (lower is better)
Translates to: FIKSLFWPSTQCISTTASKFPTL*KSVLVT
Trigger: GGTTACGAGTACTGACTTTCAAAGAGTGGGAAATTT...CGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR GCA 90 bp GGTTACGTACGTAAGTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAAAGTCCTTGTGGCTTCTaGACTTTAAATTTCCCACTC +
Preference number: 2 (lower is better)
Translates to: GYVRKCKAGSSNPYSGPQSPCGF*TLNFPL
Trigger: GAGTGGGAAATTTAAAGTGCAGAAGCCACAAGGACT...TTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCACTTACGTACGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR GCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCATTCTCCAAAGAGATCTaGAGAACCCTGGCATTCCCA +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSFSKEI*RTLAFP
Trigger: TGGGAATGCCAGGGTTCTGCAGATCTCTTTGGAGAA...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCAATGTTGCCAGGTGGTaGCGGCACATACCTTTAATT +
Preference number: 2 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTNVARW*RHIPLI
Trigger: AATTAAAGGTATGTGCCGCCACCACCTGGCAACATT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTCAGAAACTGCGCAAGTaGTGGCAGGAGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSQKLRK*WQENQE
Trigger: CTCCTGGTTCTCCTGCCACCACTTGCGCAGTTTCTG...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp CTTGTACACTCACATCAGGAAGAATTCATTTTGTTGTTCTCCATATaGGATACAGCAAGAGACAATGCAACTACTCCAGGCACTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LVHSHQEEFILLFSI*DTARDNATTPGTAG
Trigger: GCCTGCAGTGCCTGGAGTAGTTGCATTGTCTCTTGCTGTATCCAATATGGAGAACAACAAAATGAATTCTTCCTGATGTGAGTGTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTCCAAGCAACCCTTGGTaGCAGACACTTTCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSPSNPW*QTLSRQ
Trigger: CTGCCTAGAAAGTGTCTGTCACCAAGGGTTGCTTGG...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCACAACAGACTGTTTCTaGGACACAGAAGAACAAAGC +
Preference number: 2 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTTTDCF*DTEEQS
Trigger: GCTTTGTTCTTCTGTGTCTCAGAAACAGTCTGTTGT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCAATGTGTAAGCTCTATTaGTCTGAGTACCCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSMCKLY*SEYPEP
Trigger: TGGCTCAGGGTACTCAGAGCAATAGAGCTTACACAT...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCACCAGCTTTTGAGGCCTaGTTGGACTACAAAATGAGA +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSPAFEA*LDYKMR
Trigger: TCTCATTTTGTAGTCCAAGCAGGCCTCAAAAGCTGG...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp GGCAGCATTAGTTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCACAGAAGAACAAAGCTaGGACTTCTCCAAAGAGATC +
Preference number: 2 (lower is better)
Translates to: GSISCSNQQLKKRTTVLVTEEQS*DFSKEI
Trigger: GATCTCTTTGGAGAAGTCTCAGCTTTGTTCTTCTGT...GACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAACTAATGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTTGCAGTGCTAAGGATTaGATTCAGGGCCCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSCSAKD*IQGPVH
Trigger: ATGCACAGGGCCCTGAATTCAATCCTTAGCACTGCA...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTTTCTCTGATAAGGGATaGGGCTCAGGCTGTACAGGA +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSFSDKG*GSGCTG
Trigger: TCCTGTACAGCCTGAGCCTCATCCCTTATCAGAGAA...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTCCAGTCCTGGAGCATTaGGCTTTTGACCAGTTACTA +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSPVLEH*AFDQLL
Trigger: TAGTAACTGGTCAAAAGCTCAATGCTCCAGGACTGG...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATACAAAAGTCAATACTGTaGTGGAAGGGCATTTTAAAT +
Preference number: 2 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSIQKSIL*WKGILN
Trigger: ATTTAAAATGCCCTTCCAGCACAGTATTGACTTTTG...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTATGCTGTCGGTGGGTTaGTGGGTACACTTTATTGTG +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSMLSVG*WVHFIV
Trigger: CACAATAAAGTGTACCCACCAACCCACCGACAGCAT...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 90 bp TTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCATTaGAGTGAGTCACAGCAGATCTTTCCAGAACAGAACAGGATCTTA +
Preference number: 2 (lower is better)
Translates to: LLQPAIKETNHCFSH*SESQQIFPEQNRIL
Trigger: TAAGATCCTGTTCTGTTCTGGAAAGATCTGCTGTGACTCACTCAAATGACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AGACTTCTCCAAAGAGATCTGCAGAACCCTGGCATTCCCATTAGAAATGTGTTTATTCAACTCTGGTTCTaGAATAGGCAATGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: RLLQRDLQNPGIPIRNVFIQLWF*NRQCQN
Trigger: ATTCTGACATTGCCTATTTCAGAACCAGAGTTGAAT...AAACACATTTCTAATGGGAATGCCAGGGTTCTGCAGATCTCTTTGGAGAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCAGAAATTTCACTTGAGTaGTGGAATTGTAGCTTACTC +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSEISLE*WNCSLL
Trigger: GAGTAAGCTACAATTCCATCACTCAAGTGAAATTTC...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCTACATCTCAGAGTTTTaGTTATTCAACTCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTYISEF*LFNSGS
Trigger: AGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTA...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCAATGTTCTACTACAATTaGACCTCTAGCCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSMFYYN*TSSHFC
Trigger: ACAGAAATGGCTAGAGGTGCAATTGTAGTAGAACAT...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTACTTTAGGAACCCCTTaGATTCTAAGCTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: HCIISLAPYITFLTEEEITLGTP*ILSSSF
Trigger: GAAGGAAGAGCTTAGAATCCAAGGGGTTCCTAAAGT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CCA 90 bp GACCATAGCGATACTGCTCTTGTCAAACGTTTTCAAATTCTAGGAACATTATCTACATGGTGTCACTCATaGACCAGTGGTGAAATTCTG +
Preference number: 2 (lower is better)
Translates to: DHSDTALVKRFQILGTLSTWCHS*TSGEIL
Trigger: CAGAATTTCACCACTGGTCCATGAGTGACACCATGT...AGATAATGTTCCTAGAATTTGAAAACGTTTGACAAGAGCAGTATCGCTATGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR TCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTAGTTGGCTAAGAGTATaGATTATTCTTGCAGAGACC +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSSWLRV*IILAET
Trigger: GGTCTCTGCAAGAATAATTCATACTCTTAGCCAACT...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR GCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTAGCTTTCAACCCCACTaGACTATTTACATTTCCTTA +
Preference number: 2 (lower is better)
Translates to: NKITLRARWKLISLGDLSSFQPH*TIYISL
Trigger: TAAGGAAATGTAAATAGTGCAGTGGGGTTGAAAGCT...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GGCTGCCAAGCTGCGCTCTCCCACTGCTCCCTGCCCTaGGTGAACAGTACCTGGAGTACAAGCTTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: GCQAALSHCSLP*VNSTWSTSLPS
Trigger: GGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GCCAAGCTGCGCTCTCCCACTGCTCCCTGCCCTGGGTaGACAGTACCTGGAGTACAAGCTTGCCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: AKLRSPTAPCPG*TVPGVQACPPL
Trigger: CAGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CCAGTGCTGAGAGGCTGCCAAGCTGCGCTCTCCCACTaGTCCCTGCCCTGGGTGAACAGTACCTGGAGTACA +
Preference number: 3 (lower is better)
Translates to: PVLRGCQAALSH*SLPWVNSTWST
Trigger: TGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAGCGCAGCTTGGCAGCCTCTCAGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GTGGCCTCGGGAGTCTCCTCCTGGCACAGTAACTTCTaGCTGAGGCAATGGCCTCCATCAGCAGCAGCCTCG +
Preference number: 3 (lower is better)
Translates to: VASGVSSWHSNF*LRQWPPSAAAS
Trigger: CGAGGCTGCTGCTGATGGAGGCCATTGCCTCAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CAA 90 bp CCTCCATCAGCAGCAGCCTCGCCGCCCGGCACATCAAGCCCACACAGGGCACTCCTAAGGCCCATCTCATaGTCCGACCCTGACAAAACT +
Preference number: 3 (lower is better)
Translates to: PPSAAASPPGTSSPHRALLRPIS*SDPDKT
Trigger: AGTTTTGTCAGGGTCGGACAATGAGATGGGCCTTAG...GAGTGCCCTGTGTGGGCTTGATGTGCCGGGCGGCGAGGCTGCTGCTGATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 72 bp ACATCAAGCCCACACAGGGCACTCTCTTGGGGGCTGTaGGCCACGTCTTGGCCACTACTCAGCTCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: TSSPHRALSWGL*ATSWPLLSSLG
Trigger: TCCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGTGGGCTTGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 72 bp TCCCTTTCATCCTCCGTGGCCTCGGGAGTCTCCTCCTaGCACAGTAACTTCTGGCTGAGGCAATGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: SLSSSVASGVSS*HSNFWLRQWPP
Trigger: TGGAGGCCATTGCCTCAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGCCACGGAGGATGAAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 72 bp CACATCCCCTTCTCCCCTTCCTCAGGGCACTCCCGATaGTGCCCAAGACGCCTCCATACTCAAGGAGCAGTA +
Preference number: 3 (lower is better)
Translates to: HIPFSPSSGHSR*CPRRLHTQGAV
Trigger: TACTGCTCCTTGAGTATGGAGGCGTCTTGGGCACCATCGGGAGTGCCCTGAGGAAGGGGAGAAGGGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp CTTTGGGAGTGGACTTTCTCTCTTCCAAGGCTAAGATaGCGTCCTCAGGAGCCCGAGGCACCTCCCGCAGCT +
Preference number: 3 (lower is better)
Translates to: LWEWTFSLPRLR*RPQEPEAPPAA
Trigger: AGCTGCGGGAGGTGCCTCGGGCTCCTGAGGACGTCATCTTAGCCTTGGAAGAGAGAAAGTCCACTCCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 72 bp CGCCACTCTTCAGGGCTTATCGGCCACAAGCTACCTTaGGGTTCCACTTCCAGGTTGGGAATGGGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: RHSSGLIGHKLP*GSTSRLGMGRG
Trigger: TCCCCTGCCCATTCCCAACCTGGAAGTGGAACCTCAAGGTAGCTTGTGGCCGATAAGCCCTGAAGAGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CCCCCTTCTCAGAAGCCTCTCCGTCCTGGGCTCCATTaGTGGAGCCTTTACAACTTTCCATGGCCTCCATCC +
Preference number: 3 (lower is better)
Translates to: PPSQKPLRPGLH*WSLYNFPWPPS
Trigger: GGATGGAGGCCATGGAAAGTTGTAAAGGCTCCAGCAATGGAGCCCAGGACGGAGAGGCTTCTGAGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 72 bp ACACCAGATGCCACCAGAGCCCCTCTGGCCTTTGGCTaGGATGATCTGCTCCTCCTAGGTTTAGCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: TPDATRAPLAFG*DDLLLLGLAAV
Trigger: CACAGCAGCTAAACCTAGGAGGAGCAGATCATCGCAGCCAAAGGCCAGAGGGGCTCTGGTGGCATCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp ATCCCCTTCTCCCCTTCCTCAGGGCACTCCCGATGGTaGCCAAGACGCCTCCATACTCAAGGAGCAGTAACT +
Preference number: 3 (lower is better)
Translates to: IPFSPSSGHSRW*PRRLHTQGAVT
Trigger: AGTTACTGCTCCTTGAGTATGGAGGCGTCTTGGGCACCATCGGGAGTGCCCTGAGGAAGGGGAGAAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp TACCTAACAGGCAATAGAACAGCCTCCCGTGGGCAGTaGTGGCGCCACTCTTCAGGGCTTATCGGCCACAAG +
Preference number: 3 (lower is better)
Translates to: YLTGNRTASRGQ*WRHSSGLIGHK
Trigger: CTTGTGGCCGATAAGCCCTGAAGAGTGGCGCCAGCACTGCCCACGGGAGGCTGTTCTATTGCCTGTTAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp CTCTCCCACTGCTCCCTGCCCTGGGTGAACAGTACCTaGAGTACAAGCTTGCCCTCCTCTGAGCTTACTTCC +
Preference number: 3 (lower is better)
Translates to: LSHCSLPWVNST*STSLPSSELTS
Trigger: GGAAGTAAGCTCAGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGAGCAGTGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp CTAACAGGCAATAGAACAGCCTCCCGTGGGCAGTGCTaGCGCCACTCTTCAGGGCTTATCGGCCACAAGCTA +
Preference number: 3 (lower is better)
Translates to: LTGNRTASRGQC*RHSSGLIGHKL
Trigger: TAGCTTGTGGCCGATAAGCCCTGAAGAGTGGCGCCAGCACTGCCCACGGGAGGCTGTTCTATTGCCTGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp AGATGCCACCAGAGCCCCTCTGGCCTTTGGCTGCGATaGTCTGCTCCTCCTAGGTTTAGCTGCTGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: RCHQSPSGLWLR*SAPPRFSCCEE
Trigger: CTCTTCACAGCAGCTAAACCTAGGAGGAGCAGATCATCGCAGCCAAAGGCCAGAGGGGCTCTGGTGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp TATATAAGGAGTGGAACAGCACTGCTAACCCAGTGCTaGGAGGCTGCCAAGCTGCGCTCTCCCACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: YIRSGTALLTQC*EAAKLRSPTAP
Trigger: GGGAGCAGTGGGAGAGCGCAGCTTGGCAGCCTCTCAGCACTGGGTTAGCAGTGCTGTTCCACTCCTTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp GCAGCCATGAGCAGGACCTCCACTGGAGAACACTGTTaGCCTTGTCACCAAGCAACCCTTGGTGACAGACAC +
Preference number: 3 (lower is better)
Translates to: AAMSRTSTGEHC*PCHQATLGDRH
Trigger: GTGTCTGTCACCAAGGGTTGCTTGGTGACAAGGGCAACAGTGTTCTCCAGTGGAGGTCCTGCTCATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TGGGACAGAAGTGGCAGTGGCTGGCCTCGGGCAGGGTaGGTACTGGTCATTCTGATTTCCACAGCTTTCCTA +
Preference number: 3 (lower is better)
Translates to: WDRSGSGWPRAG*VLVILISTAFL
Trigger: TAGGAAAGCTGTGGAAATCAGAATGACCAGTACCCACCCTGCCCGAGGCCAGCCACTGCCACTTCTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AAACACACTGGAGCATATAACGAGCAGGCTTTTTGCTaGGACAGAAGTGGCAGTGGCTGGCCTCGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KHTGAYNEQAFC*DRSGSGWPRAG
Trigger: CCCTGCCCGAGGCCAGCCACTGCCACTTCTGTCCCAGCAAAAAGCCTGCTCGTTATATGCTCCAGTGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GGGGTCCAGAGTCCCTGCAAGTCTCCCGGAAGTGAGTaGACAAGGAAAGAAAGCACACATGCGTACGCACAC +
Preference number: 3 (lower is better)
Translates to: GVQSPCKSPGSE*TRKESTHAYAH
Trigger: GTGTGCGTACGCATGTGTGCTTTCTTTCCTTGTCCACTCACTTCCGGGAGACTTGCAGGGACTCTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAGTGGGAAAACCGTGTTaGTTCTGGCTTCCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRVGKPC*FWLPCA
Trigger: GGCACAGGGAAGCCAGAACAAACACGGTTTTCCCAC...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GTATGGGGTCCAGAGTCCCTGCAAGTCTCCCGGAAGTaGGTGGACAAGGAAAGAAAGCACACATGCGTACGC +
Preference number: 3 (lower is better)
Translates to: VWGPESLQVSRK*VDKERKHTCVR
Trigger: GCGTACGCATGTGTGCTTTCTTTCCTTGTCCACTCACTTCCGGGAGACTTGCAGGGACTCTGGACCCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp ACCTGGGCTCACGCAGAGGGATGGCTTCCCAGCTTTTaGGGCCTGCTTGGACTACAAAATGAGACCGTTTCC +
Preference number: 3 (lower is better)
Translates to: TWAHAEGWLPSF*GLLGLQNETVS
Trigger: GGAAACGGTCTCATTTTGTAGTCCAAGCAGGCCTCAAAAGCTGGGAAGCCATCCCTCTGCGTGAGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp GCTTGCCCTCCTCTGAGCTTACTTCCAAGCCACTTCTaGCAAGTGCAGCTGAACTTCAGCCCTGTACCTTGC +
Preference number: 3 (lower is better)
Translates to: ACPPLSLLPSHF*QVQLNFSPVPC
Trigger: GCAAGGTACAGGGCTGAAGTTCAGCTGCACTTGGCAGAAGTGGCTTGGAAGTAAGCTCAGAGGAGGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp ACAGCTTACGTCCTCCTCCTGTCTAACCTACTTCCCTaGACTTCCTCACTGCATGTCACCGCTGGAAGAGCG +
Preference number: 3 (lower is better)
Translates to: TAYVLLLSNLLP*TSSLHVTAGRA
Trigger: CGCTCTTCCAGCGGTGACATGCAGTGAGGAAGTGCAGGGAAGTAGGTTAGACAGGAGGAGGACGTAAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GGTGAACAGTACCTGGAGTACAAGCTTGCCCTCCTCTaGGCTTACTTCCAAGCCACTTCTGCCAAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: GEQYLEYKLALL*AYFQATSAKCS
Trigger: GCTGCACTTGGCAGAAGTGGCTTGGAAGTAAGCTCAGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GAGCTTTATCCAGGCACCCATCCTGGGTATGAGTACTaGGTAATACAGAGACGGAGCTCAGGCTCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: ELYPGTHPGYEY*VIQRRSSGSRP
Trigger: TGGCCTGGAGCCTGAGCTCCGTCTCTGTATTACTCAGTACTCATACCCAGGATGGGTGCCTGGATAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GTGGTGGCAGGAGAACCAGGAGTTAAGTGCCTGCCTTaGCTACCTCAAAAGTTCGAGGCCAGCCTGAATGAA +
Preference number: 3 (lower is better)
Translates to: VVAGEPGVKCLP*LPQKFEASLNE
Trigger: TTCATTCAGGCTGGCCTCGAACTTTTGAGGTAGCCAAGGCAGGCACTTAACTCCTGGTTCTCCTGCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TCTATCCCCTGCCTGTCCTGTGCCCGTCCCCACTGGTaGCTTTACATGGCACTTTATTGGCCATTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: SIPCLSCARPHW*LYMALYWPFLK
Trigger: CTTCAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGGCACAGGACAGGCAGGGGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp ACAGACAGCATCTCTCTCACACAACTCCCTCTGCCCTaGACTCACAATGGAGGCAAGAGCAACTCTGACCTC +
Preference number: 3 (lower is better)
Translates to: TDSISLTQLPLP*THNGGKSNSDL
Trigger: GAGGTCAGAGTTGCTCTTGCCTCCATTGTGAGTTCAGGGCAGAGGGAGTTGTGTGAGAGAGATGCTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp AGGGAGTCAAAGAATACAGTGTACATATCTATCCCCTaGCTGTCCTGTGCCCGTCCCCACTGGTGGCTTTAC +
Preference number: 3 (lower is better)
Translates to: RESKNTVYISIP*LSCARPHWWLY
Trigger: GTAAAGCCACCAGTGGGGACGGGCACAGGACAGGCAGGGGATAGATATGTACACTGTATTCTTTGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp ATATCTATCCCCTGCCTGTCCTGTGCCCGTCCCCACTaGTGGCTTTACATGGCACTTTATTGGCCATTTCTG +
Preference number: 3 (lower is better)
Translates to: ISIPCLSCARPH*WLYMALYWPFL
Trigger: CAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGGCACAGGACAGGCAGGGGATAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp ATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTaGGGAGGTGAGACACCTAGAGGGAGGCACAGAAGA +
Preference number: 3 (lower is better)
Translates to: INQGFWKFRSGQ*GGETPRGRHRR
Trigger: TCTTCTGTGCCTCCCTCTAGGTGTCTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CCCGAGGCACCTCCCGCAGCTGCCTCACTCGCTCTCTTCTCTTCCGCCTTAAATTCATGGATGATCCTTTaGACAAATTCTAGCTCACCT +
Preference number: 3 (lower is better)
Translates to: PEAPPAAASLALFSSALNSWMIL*TNSSSP
Trigger: AGGTGAGCTAGAATTTGTCAAAAGGATCATCCATGA...ATTTAAGGCGGAAGAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCCTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CAA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGAAAATGTCTTCAATGTaGCCAGGTGGTGGCGGCACA +
Preference number: 3 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWKMSSM*PGGGGT
Trigger: TGTGCCGCCACCACCTGGCAACATTGAAGACATTTT...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp TTTGGTGCTAGAGCCCAGCCTTTAGCTTCTTGGACCTaGGTTCAAATCCTGCTTCTGTGCCTTGGCTCAGTC +
Preference number: 3 (lower is better)
Translates to: FGARAQPLASWT*VQILLLCLGSV
Trigger: GACTGAGCCAAGGCACAGAAGCAGGATTTGAACTCAGGTCCAAGAAGCTAAAGGCTGGGCTCTAGCACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CTGGGGCTGGAGAGATGGTGCAGAGAGAGCTACTTTTaGACAGGACTGAGTTTAGTTCCTAGCATGCATGTC +
Preference number: 3 (lower is better)
Translates to: LGLERWCRESYF*TGLSLVPSMHV
Trigger: GACATGCATGCTAGGAACTAAACTCAGTCCTGTGCAAAAGTAGCTCTCTCTGCACCATCTCTCCAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATAGCCATCTTCCTGCCTTaGCCTCCAAGTAGTGGGGTT +
Preference number: 3 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSIAIFLP*PPSSGV
Trigger: AACCCCACTACTTGGAGGCAAAGGCAGGAAGATGGC...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp GGCATTTTAACACTACAGTGGTACCCACACAAGGCACATGGGATGATTAGCACCGAGGATGCAGCTCAGTaGGGAGAACATTTGCCTAGC +
Preference number: 3 (lower is better)
Translates to: GILTLQWYPHKAHGMISTEDAAQ*GEHLPS
Trigger: GCTAGGCAAATGTTCTCCCAACTGAGCTGCATCCTC...GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACTGTTCACTTTCCCTGTaGCTAAGGAACACCCATGAT +
Preference number: 3 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDCSLSL*LRNTHD
Trigger: ATCATGGGTGTTCCTTAGCAACAGGGAAAGTGAACA...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGTCCTGCTTCTGTGCCTaGGCTCAGTCAATAACATTA +
Preference number: 3 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWSCFCA*AQSITL
Trigger: TAATGTTATTGACTGAGCCAAGGCACAGAAGCAGGA...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TCTGAGTACCCTGAGCCAGGCATTTTAACACTACAGTaGTACCCACACAAGGCACATGGGATGATTAGCACC +
Preference number: 3 (lower is better)
Translates to: SEYPEPGILTLQ*YPHKAHGMIST
Trigger: GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCCTGGCTCAGGGTACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GCCCGTCCCCACTGGTGGCTTTACATGGCACTTTATTaGCCATTTCTGAAGACACTCTGTGATAACTGCACT +
Preference number: 3 (lower is better)
Translates to: ARPHWWLYMALY*PFLKTLCDNCT
Trigger: AGTGCAGTTATCACAGAGTGTCTTCAGAAATGGCCAATAAAGTGCCATGTAAAGCCACCAGTGGGGACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp GTTACGTACGTAAGTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAACGGGTGGGGACAGTCCTaGTGGCTTCTGCACTTTAAA +
Preference number: 3 (lower is better)
Translates to: VTYVSAKLVHQIPILALNGWGQS*WLLHFK
Trigger: TTTAAAGTGCAGAAGCCACAAGGACTGTCCCCACCC...GTTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCACTTACGTACGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR-3UTR CAA 90 bp GTAAGGGGGTGGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAAGAGAAAGCAGATATCTaGAAGGCAGCCATGAGCAGG +
Preference number: 3 (lower is better)
Translates to: VRGWNSLPWKLQANLTLKEKADI*KAAMSR
Trigger: CCTGCTCATGGCTGCCTTCAAGATATCTGCTTTCTC...TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGCACTGTTTTAGTCATTaGAGTGAGTCACAGCAGATC +
Preference number: 3 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWHCFSH*SESQQI
Trigger: GATCTGCTGTGACTCACTCAAATGACTAAAACAGTG...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp AAACTCCAAGCTAAGGCCCATCTCATTGTCCGACCCTaGCAAAACTCTGTGAAGGTGACTTTAGGAACCCCT +
Preference number: 3 (lower is better)
Translates to: KLQAKAHLIVRP*QNSVKVTLGTP
Trigger: AGGGGTTCCTAAAGTCACCTTCACAGAGTTTTGTCAGGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 72 bp CCTTTCTGGGAACCAGCTCGCTCAATTCTGTTTCCTTaGGAAAGCAGATATCTTGAAGGCAGCCATGAGCAG +
Preference number: 3 (lower is better)
Translates to: PFWEPARSILFP*ESRYLEGSHEQ
Trigger: CTGCTCATGGCTGCCTTCAAGATATCTGCTTTCTCAAGGAAACAGAATTGAGCGAGCTGGTTCCCAGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GCCTGCCTTGGCTACCTCAAAAGTTCGAGGCCAGCCTaGATGAATGAGACCCTGTTTCAAAACCCAAACAAA +
Preference number: 3 (lower is better)
Translates to: ACLGYLKSSRPA*MNETLFQNPNK
Trigger: TTTGTTTGGGTTTTGAAACAGGGTCTCATTCATTCAGGCTGGCCTCGAACTTTTGAGGTAGCCAAGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp TGGTTCATCAAATCCCTATTCTGGCCCTCAACCCAATaGATTTCAACCACGGCATCGCCAGCTTCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: WFIKSLFWPSTQ*ISTTASPASFL
Trigger: TAAGAAGGAAGCTGGCGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 72 bp CCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTaGTCATTCCATAGCAAGCCTTCCTCCCTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: PSFCLVLFLNAY*SFHSKPSSLVC
Trigger: ACAGACAAGGGAGGAAGGCTTGCTATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AATCTCTGTGATGCCCCCGGTGTTTACAGAACTAGGTaGAGGTCTTCGAGAATTCCGGGAATTTACACCCTT +
Preference number: 3 (lower is better)
Translates to: NLCDAPGVYRTR*RSSRIPGIYTL
Trigger: AAGGGTGTAAATTCCCGGAATTCTCGAAGACCTCCACCTAGTTCTGTAAACACCGGGGGCATCACAGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 72 bp TGTCCTTCTAGGGATATCAGACCAGGAGCTCATGGGTaGGGACAGTCCTTGTGGCTTCTGCACTTTAAATTT +
Preference number: 3 (lower is better)
Translates to: CPSRDIRPGAHG*GQSLWLLHFKF
Trigger: AAATTTAAAGTGCAGAAGCCACAAGGACTGTCCCCACCCATGAGCTCCTGGTCTGATATCCCTAGAAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CCA 72 bp CAGCAAAGCTCTAATGTAGGAACAACTGAGCACAGATaGGGTGAAGGAACCACACTGACAAAACCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: QQSSNVGTTEHR*GEGTTLTKPSR
Trigger: TCTGCTGGGTTTTGTCAGTGTGGTTCCTTCACCCCATCTGTGCTCAGTTGTTCCTACATTAGAGCTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TATGAAAACTTGATAAGTGAAAGGCTGGAGATGTGGTaGCCAGTCTTGGAGGAAGTGTCTTGGAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: YENLISERLEMW*PVLEEVSWRGR
Trigger: CCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAAGTTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GCTGAAACAATGTCAGTGCTCTCGAAAGGCCTACTATaGGGTTCATACCTAACAGGCAATAGAACAGCCTCC +
Preference number: 3 (lower is better)
Translates to: AETMSVLSKGLL*GSYLTGNRTAS
Trigger: GGAGGCTGTTCTATTGCCTGTTAGGTATGAACCCCATAGTAGGCCTTTCGAGAGCACTGACATTGTTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GCTCTAGGAAATGACTTCCCTGACCACAATGGGATGTaGGAACGGGTGTGGAGCTCAATACACACATATTCA +
Preference number: 3 (lower is better)
Translates to: ALGNDFPDHNGM*ERVWSSIHTYS
Trigger: TGAATATGTGTGTATTGAGCTCCACACCCGTTCCCACATCCCATTGTGGTCAGGGAAGTCATTTCCTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAGCCGTGAATTCAATCTaGGAACAGTTTATGATATTG +
Preference number: 3 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRAVNSI*EQFMIL
Trigger: CAATATCATAAACTGTTCCAAGATTGAATTCACGGC...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp TTTCCCAGCATACAGCTATACCACCTGTTTTTGTTGTaGGGGAAACACAGGTTCTCCTGTGTCCTTCTAGGG +
Preference number: 3 (lower is better)
Translates to: FPSIQLYHLFLL*GKHRFSCVLLG
Trigger: CCCTAGAAGGACACAGGAGAACCTGTGTTTCCCTCACAACAAAAACAGGTGGTATAGCTGTATGCTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 72 bp ACAGGGGCTAGGGAGATGGCTAGTTGGCTAAGAGTATaGATTATTCTTGCAGAGACCCAAGTTTGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: TGAREMASWLRV*IILAETQVWFP
Trigger: TGGGAACCAAACTTGGGTCTCTGCAAGAATAATTCATACTCTTAGCCAACTAGCCATCTCCCTAGCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp CTTAGTGTCGTTCCATATGCAGGTTTAGTCTGTGAATaGTTTGCCTTGGAAGAAGCTCTGACTGAGCCTGAC +
Preference number: 3 (lower is better)
Translates to: LSVVPYAGLVCE*FALEEALTEPD
Trigger: GTCAGGCTCAGTCAGAGCTTCTTCCAAGGCAAACCATTCACAGACTAAACCTGCATATGGAACGACACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp GACTTCCCTGACCACAATGGGATGTGGGAACGGGTGTaGAGCTCAATACACACATATTCACACTATTCATAC +
Preference number: 3 (lower is better)
Translates to: DFPDHNGMWERV*SSIHTYSHYSY
Trigger: GTATGAATAGTGTGAATATGTGTGTATTGAGCTCCACACCCGTTCCCACATCCCATTGTGGTCAGGGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AGTCCTGTTGTGTCTTTTCTAGCTGCTGAGGATGTCTaGGTCAGGAGGGCAACAGGATCTTCTATCACTTTT +
Preference number: 3 (lower is better)
Translates to: SPVVSFLAAEDV*VRRATGSSITF
Trigger: AAAAGTGATAGAAGATCCTGTTGCCCTCCTGACCCAGACATCCTCAGCAGCTAGAAAAGACACAACAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp GGCAGCATTAGTTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCGGCCAGTTACTCCTATaGGACCACAGCAGCTTTGAT +
Preference number: 3 (lower is better)
Translates to: GSISCSNQQLKKRTTVLVGQLLL*DHSSFD
Trigger: ATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGCC...GACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAACTAATGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp GTAAGGGGGTGGAACTCTCTGCCTTGGAAACTCCAGGCAAATTTAACCCTCAAAATAGCATTTCTATATTaGGTGCTAGAGCCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: VRGWNSLPWKLQANLTLKIAFLY*VLEPSL
Trigger: AAGGCTGGGCTCTAGCACCAAATATAGAAATGCTAT...TTTGAGGGTTAAATTTGCCTGGAGTTTCCAAGGCAGAGAGTTCCACCCCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATAACTTCAGACTTGCCTTaGAAGGAAAAAGGATGTGGC +
Preference number: 3 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSITSDLP*KEKGCG
Trigger: GCCACATCCTTTTTCCTTCAAAGGCAAGTCTGAAGT...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp AGCAGCCACGCAGGGATACGACAACACCTAATAGGGTaGCTACATGAGACAATCTCTATGGAAGATGTACTA +
Preference number: 3 (lower is better)
Translates to: SSHAGIRQHLIG*LHETISMEDVL
Trigger: TAGTACATCTTCCATAGAGATTGTCTCATGTAGTCACCCTATTAGGTGTTGTCGTATCCCTGCGTGGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CAATGCTGTCGGTGGGTTGGTGGGTACACTTTATTGTaGCTCAGCTACATCTCAGAGTTTTGCTTATTCAAC +
Preference number: 3 (lower is better)
Translates to: QCCRWVGGYTLL*LSYISEFCLFN
Trigger: GTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACCCACCAACCCACCGACAGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CCCATACAGGTTCTCTTGTTGTGTTGTGTCTACACCTaGTCTTTCTGCATCATCAGGAAACTACCATCCCTA +
Preference number: 3 (lower is better)
Translates to: PIQVLLLCCVYT*SFCIIRKLPSL
Trigger: TAGGGATGGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGAACCTGTATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AAATATGAAAACTTGATAAGTGAAAGGCTGGAGATGTaGTGGCCAGTCTTGGAGGAAGTGTCTTGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: KYENLISERLEM*WPVLEEVSWRG
Trigger: TCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAAGTTTTCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp TTCATCAAATCCCTATTCTGGCCCTCAACCCAATGCATTTCAACCACGGCATCGCCCAAAGATGAAGCTTaGAGAGACAATTCTTTCATC +
Preference number: 3 (lower is better)
Translates to: FIKSLFWPSTQCISTTASPKDEA*RDNSFI
Trigger: GATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGGG...CGATGCCGTGGTTGAAATGCATTGGGTTGAGGGCCAGAATAGGGATTTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR TCA 72 bp AAATATCTGCCAGGTTCTCTGGCACTTAACTGCCACTaGGCTCAGAGATCCCAGGATTTCATTAAGGAAACT +
Preference number: 3 (lower is better)
Translates to: KYLPGSLALNCH*AQRSQDFIKET
Trigger: AGTTTCCTTAATGAAATCCTGGGATCTCTGAGCTCAGTGGCAGTTAAGTGCCAGAGAACCTGGCAGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GTTCCAGAAGAAAAGTGCTGCAAGTTAAGAAAGCTATaGAGACAGACAGCATCTCTCTCACACAACTCCCTC +
Preference number: 3 (lower is better)
Translates to: VPEEKCCKLRKL*RQTASLSHNSL
Trigger: GAGGGAGTTGTGTGAGAGAGATGCTGTCTGTCTTCATAGCTTTCTTAACTTGCAGCACTTTTCTTCTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp AGATGTACTACCAATGGTCAGTTCCTGATCATTTCATaGCACACAAGGTGGCTTTGCTCTTGGTCCATAAGC +
Preference number: 3 (lower is better)
Translates to: RCTTNGQFLIIS*HTRWLCSWSIS
Trigger: GCTTATGGACCAAGAGCAAAGCCACCTTGTGTGTCATGAAATGATCAGGAACTGACCATTGGTAGTACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp CGCAGGGATACGACAACACCTAATAGGGTGACTACATaGGACAATCTCTATGGAAGATGTACTACCAATGGT +
Preference number: 3 (lower is better)
Translates to: RRDTTTPNRVTT*DNLYGRCTTNG
Trigger: ACCATTGGTAGTACATCTTCCATAGAGATTGTCTCATGTAGTCACCCTATTAGGTGTTGTCGTATCCCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp GTTGGCAAGCACATTCACTCAAGGGAAAGTCTAGTTTaGTGTTTCAGCAAAAGCTTCGCTGGGTTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: VGKHIHSRESLV*CFSKSFAGLEN
Trigger: ATTCTCCAACCCAGCGAAGCTTTTGCTGAAACATCAAACTAGACTTTCCCTTGAGTGAATGTGCTTGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp GAACAGAACAGGATCTTAGGCATGTGTAAGCTCTATTaGTCTGAGTACCCTGAGCCAGGCATTTTAACACTA +
Preference number: 3 (lower is better)
Translates to: EQNRILGMCKLY*SEYPEPGILTL
Trigger: TAGTGTTAAAATGCCTGGCTCAGGGTACTCAGAGCAATAGAGCTTACACATGCCTAAGATCCTGTTCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp TTTCATGCAGATTTCCAACGCCTTCCTTCTGTCTTGTaGTATTCCTCAATGCCTACTGCTCATTCCATAGCA +
Preference number: 3 (lower is better)
Translates to: FHADFQRLPSVL*YSSMPTAHSIA
Trigger: TGCTATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTGGAAATCTGCATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AAAGGCAGTACAATTGTTACAAAACAATGCTGTCGGTaGGTTGGTGGGTACACTTTATTGTGCCTCAGCTAC +
Preference number: 3 (lower is better)
Translates to: KGSTIVTKQCCR*VGGYTLLCLSY
Trigger: GTAGCTGAGGCACAATAAAGTGTACCCACCAACCCACCGACAGCATTGTTTTGTAACAATTGTACTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TTTCACATCTTTCCACACCTGGCCAGTTACTCCTATTaGACCACAGCAGCTTTGATTTCCATCATGAAATGG +
Preference number: 3 (lower is better)
Translates to: FHIFPHLASYSY*TTAALISIMKW
Trigger: CCATTTCATGATGGAAATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGCCAGGTGTGGAAAGATGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp AGTCTACACCACACCAATACCTGTTTTCTATTGTTCTaGGGATGGAACTCGGGGCCTACAAACATTGATGAA +
Preference number: 3 (lower is better)
Translates to: SLHHTNTCFLLF*GWNSGPTNIDE
Trigger: TTCATCAATGTTTGTAGGCCCCGAGTTCCATCCTCAGAACAATAGAAAACAGGTATTGGTGTGGTGTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp GACCATAGCGATACTGCTCTTGTCAAACGTTTTCAAATTCTAGGAACATTATCTCAGTTGGGAGAACATTaGCCTAGCACACAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: DHSDTALVKRFQILGTLSQLGEH*PSTQKS
Trigger: GGACTTCTGTGTGCTAGGCAAATGTTCTCCCAACTG...AGATAATGTTCCTAGAATTTGAAAACGTTTGACAAGAGCAGTATCGCTATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp ATCTCTATGGAAGATGTACTACCAATGGTCAGTTCCTaGTCATTTCATGACACACAAGGTGGCTTTGCTCTT +
Preference number: 3 (lower is better)
Translates to: ISMEDVLPMVSS*SFHDTQGGFAL
Trigger: AAGAGCAAAGCCACCTTGTGTGTCATGAAATGATCAGGAACTGACCATTGGTAGTACATCTTCCATAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp CTAACTTCTTCTCTTCCACAGGGAATTCGCTTATGTTaGACCTTCAGATCAGTCAGGATCTTTTCTATCCAT +
Preference number: 3 (lower is better)
Translates to: LTSSLPQGIRLC*TFRSVRIFSIH
Trigger: ATGGATAGAAAAGATCCTGACTGATCTGAAGGTGCAACATAAGCGAATTCCCTGTGGAAGAGAAGAAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR GCA 72 bp GGCCCTGTGCATGCTAGGCAAATGTTCTACTACAATTaGACCTCTAGCCATTTCTGTTTCAAAATCATTGAA +
Preference number: 3 (lower is better)
Translates to: GPVHARQMFYYN*TSSHFCFKIIE
Trigger: TTCAATGATTTTGAAACAGAAATGGCTAGAGGTGCAATTGTAGTAGAACATTTGCCTAGCATGCACAGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR-3UTR CAA 90 bp AGGCCTGTTATTGCCTTTAGGAGCCTAAAAATGGCCACCAGATTTTTCTCATCAATCACTTATTTCACATaGATTCTGGTCCAACGTGCT +
Preference number: 3 (lower is better)
Translates to: RPVIAFRSLKMATRFFSSITYFT*ILVQRA
Trigger: AGCACGTTGGACCAGAATCAATGTGAAATAAGTGAT...TGATGAGAAAAATCTGGTGGCCATTTTTAGGCTCCTAAAGGCAATAACAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp ATTCCCATTAGAAATGTGTTTCACATATGGTTACTCTaGGCACAGTATTGTCCAATGTTAGCAGATGAGCAG +
Preference number: 3 (lower is better)
Translates to: IPIRNVFHIWLL*AQYCPMLADEQ
Trigger: CTGCTCATCTGCTAACATTGGACAATACTGTGCCCAGAGTAACCATATGTGAAACACATTTCTAATGGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TACATGAGACAATCTCTATGGAAGATGTACTACCAATaGTCAGTTCCTGATCATTTCATGACACACAAGGTG +
Preference number: 3 (lower is better)
Translates to: YMRQSLWKMYYQ*SVPDHFMTHKV
Trigger: CACCTTGTGTGTCATGAAATGATCAGGAACTGACCATTGGTAGTACATCTTCCATAGAGATTGTCTCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR TCA 72 bp TTTCCTTATACCTTTGCCAAAAAGTATAGCCACCTCTaGAAATGGAGCTTAACTACTTTATGGATGCCGAAG +
Preference number: 3 (lower is better)
Translates to: FPYTFAKKYSHL*KWSLTTLWMPK
Trigger: CTTCGGCATCCATAAAGTAGTTAAGCTCCATTTTCAGAGGTGGCTATACTTTTTGGCAAAGGTATAAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp TACACTTTATTGTGCCTCAGCTACATCTCAGAGTTTTaGTTATTCAACTCTGGTTCTGAAATAGGCAATGTC +
Preference number: 3 (lower is better)
Translates to: YTLLCLSYISEF*LFNSGSEIGNV
Trigger: GACATTGCCTATTTCAGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR GCA 72 bp ATGGCTAAAATGTTCTTTCCCAGCTTTCAACCCCACTaGACTATTTACATTTCCTTATACCTTTGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: MAKMFFPSFQPH*TIYISLYLCQK
Trigger: TTTTTGGCAAAGGTATAAGGAAATGTAAATAGTGCAGTGGGGTTGAAAGCTGGGAAAGAACATTTTAGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AAGAACTTGATGATCTTGTGTCAATCCTACCTTCAATaGCAAGCTTACAAAGCATATGTATGGGTTTTGTGT +
Preference number: 3 (lower is better)
Translates to: KNLMILCQSYLQ*QAYKAYVWVLC
Trigger: ACACAAAACCCATACATATGCTTTGTAAGCTTGCCATTGAAGGTAGGATTGACACAAGATCATCAAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp TCCTACCTTCAATGGCAAGCTTACAAAGCATATGTATaGGTTTTGTGTAGCTCCATAGTAAAATATTTGGAA +
Preference number: 3 (lower is better)
Translates to: SYLQWQAYKAYV*VLCSSIVKYLE
Trigger: TTCCAAATATTTTACTATGGAGCTACACAAAACCCATACATATGCTTTGTAAGCTTGCCATTGAAGGTAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CCA 72 bp AAATTAAAAATCAGCATCCTATCACTATCAAAGGTATaGCAAAACCAGCCAATCGTTCATGGAAGTGTATGT +
Preference number: 3 (lower is better)
Translates to: KLKISILSLSKV*QNQPIVHGSVC
Trigger: ACATACACTTCCATGAACGATTGGCTGGTTTTGCCATACCTTTGATAGTGATAGGATGCTGATTTTTAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp GGTGACAGACACTTTCTAGGCAGCCCTGACCCACACCAGATGCCACCAGAGCCCCTCTCTTGGGGGCTGTaGGCCACGTCTTGGCCACTA +
Preference number: 4 (lower is better)
Translates to: GDRHFLGSPDPHQMPPEPLSWGL*ATSWPL
Trigger: TAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAG...GGGCTCTGGTGGCATCTGGTGTGGGTCAGGGCTGCCTAGAAAGTGTCTGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp GCGCCACTCTTCAGGGCTTATCGGCCACAAGCTACCTaGAGGTTCCACTTCCAGGTTGGGAATGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APLFRAYRPQAT*RFHFQVGNGQG
Trigger: CCCCTGCCCATTCCCAACCTGGAAGTGGAACCTCAAGGTAGCTTGTGGCCGATAAGCCCTGAAGAGTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CCCGAGGCACCTCCCGCAGCTGCCTCACTCGCTCTCTTCTCTTCCGCCTTAAATGTCTCAAGGGGACTGTaGGAATTAGTCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PEAPPAAASLALFSSALNVSRGL*ELVSPK
Trigger: CTTTGGAGAGACTAATTCCCACAGTCCCCTTGAGAC...ATTTAAGGCGGAAGAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGCACAGGGCACTCTCTTaGGGGCTGTGGGCCACGTCT +
Preference number: 4 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEHRALS*GLWATS
Trigger: AGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTG...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp GGGCTGTGGGCCACGTCTTGGCCACTACTCAGCTCTTaGGGAGTGGACTTTCTCTCTTCCAAGGCTAAGATG +
Preference number: 4 (lower is better)
Translates to: GLWATSWPLLSS*GVDFLSSKAKM
Trigger: CATCTTAGCCTTGGAAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTGGCCAAGACGTGGCCCACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CAA 72 bp GTTTGGTTCCCAGCACCCATACCAGGTAGCTCACAGTaGCCTGGAACTTCAGCTCCAGGGGATCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: VWFPAPIPGSSQ*PGTSAPGDLMP
Trigger: AGGCATCAGATCCCCTGGAGCTGAAGTTCCAGGCAACTGTGAGCTACCTGGTATGGGTGCTGGGAACCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp TCCCTGCCCTGGGTGAACAGTACCTGGAGTACAAGCTaGCCCTCCTCTGAGCTTACTTCCAAGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPWVNSTWSTS*PSSELTSKPLL
Trigger: CAGAAGTGGCTTGGAAGTAAGCTCAGAGGAGGGCAAGCTTGTACTCCAGGTACTGTTCACCCAGGGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp TTGACGACTGAGGATGCAGCTCAGTTGGGAGAACATTaGCCTAGCACACAGAAGTCCCAGGTTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: LTTEDAAQLGEH*PSTQKSQVHWS
Trigger: GCTCCAGTGAACCTGGGACTTCTGTGTGCTAGGCAAATGTTCTCCCAACTGAGCTGCATCCTCAGTCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp TCCCAAGGAGAGCCTAGAGGCCCTGAGCTTTCTTGCTaGGACTCAGACAGCCAGATAGCCTATATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQGEPRGPELSC*DSDSQIAYIPK
Trigger: CTTTGGGATATAGGCTATCTGGCTGTCTGAGTCCAAGCAAGAAAGCTCAGGGCCTCTAGGCTCTCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp TTGATAAGTGAAAGGCTGGAGATGTGGTGGCCAGTCTaGGAGGAAGTGTCTTGGAGGGGAAGGTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LISERLEMWWPV*EEVSWRGRLPL
Trigger: CAGAGGCAACCTTCCCCTCCAAGACACTTCCTCCAAGACTGGCCACCACATCTCCAGCCTTTCACTTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp GTGGACTTTCTCTCTTCCAAGGCTAAGATGACGTCCTCAGGAGCCCGAGGCACCTTGTCCGAATCCTGGTaGCCAATCAAATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: VDFLSSKAKMTSSGARGTLSESW*PIKSST
Trigger: GGTAGAAGATTTGATTGGTCACCAGGATTCGGACAA...GGTGCCTCGGGCTCCTGAGGACGTCATCTTAGCCTTGGAAGAGAGAAAGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp TCCCTTTCATCCTCCGTGGCCTCGGGAGTCTCCTCCTGGCACAGTAACTTCTGGATCTGGATATTTAGATaGCAGATATGCGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLSSSVASGVSSWHSNFWIWIFR*QICEVR
Trigger: CCTGACTTCGCATATCTGGCATCTAAATATCCAGAT...CCAGAAGTTACTGTGCCAGGAGGAGACTCCCGAGGCCACGGAGGATGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CCA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAAAGCTCTTCCTTCAGTaGAGCCAGACTGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRKLFLQ*SQTAFL
Trigger: AAGAAATGCAGTCTGGCTCCACTGAAGGAAGAGCTT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp GGAGATCTATCTTACCAGTCCTGGAGCATTGAGCTTTaGACCAGTTACTACCACCCCTTCCCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: GDLSYQSWSIEL*TSYYHPFPRIL
Trigger: GAGGATCCTGGGGAAGGGGTGGTAGTAACTGGTCAAAAGCTCAATGCTCCAGGACTGGTAAGATAGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp GAAACACAGGTTCTCCTGTGTCCTTCTAGGGATATCAGACCAGGAGCTCATGGGGGGATAGATGCAGGATaGCCCAGTACCTATGTCAAT +
Preference number: 4 (lower is better)
Translates to: ETQVLLCPSRDIRPGAHGGIDAG*PSTYVN
Trigger: ATTGACATAGGTACTGGGGCATCCTGCATCTATCCC...CCCATGAGCTCCTGGTCTGATATCCCTAGAAGGACACAGGAGAACCTGTGTTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp GGTACACTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGGGCACCTCCCGCAGCTaGCTCACTCGCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GTLYCASATSQSFAYSTLGTSRS*LTRSLL
Trigger: GAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCC...CAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp ATGCCTACTGCTCATTCCATAGCAAGCCTTCCTCCCTaGTCTGTGCTGAGTTCCTGTCCTCGTACCATTCAT +
Preference number: 4 (lower is better)
Translates to: MPTAHSIASLPP*SVLSSCPRTIH
Trigger: ATGAATGGTACGAGGACAGGAACTCAGCACAGACAAGGGAGGAAGGCTTGCTATGGAATGAGCAGTAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CCTGTCTCAAAAGCAACAACAGGGGCTAGGGAGATGGCTAGTTGGCTAAGAGTATCAGTGGAGCCAGACTaGATTTCTTTCCCAGCATAC +
Preference number: 4 (lower is better)
Translates to: PVSKATTGAREMASWLRVSVEPD*ISFPAY
Trigger: GTATGCTGGGAAAGAAATGCAGTCTGGCTCCACTGA...TACTCTTAGCCAACTAGCCATCTCCCTAGCCCCTGTTGTTGCTTTTGAGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGGCACCTCCCGCAGCTaGCTCACTCGCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIGTSRS*LTRSLL
Trigger: GAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCACAGGGCACTCTCTTaGGGGCTGTGGGCCACGTCT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIHRALS*GLWATS
Trigger: AGACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp GGCAGCATTAGTTGCTCCAACCAGCAATTAAAGAAACGAACCACTGTTTTAGTCTTCTGGCTGAGGCAATaGCCTCCATCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSISCSNQQLKKRTTVLVFWLRQ*PPSAAA
Trigger: GGCTGCTGCTGATGGAGGCCATTGCCTCAGCCAGAA...GACTAAAACAGTGGTTCGTTTCTTTAATTGCTGGTTGGAGCAACTAATGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp GCACCTTCAGATCAGTCAGGATCTTTTCTATCCATGTaGTTACAACCACTATGCCTTCCGCTGTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: APSDQSGSFLSM*LQPLCLPLSRS
Trigger: GCTCCGAGACAGCGGAAGGCATAGTGGTTGTAACAACATGGATAGAAAAGATCCTGACTGATCTGAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CAA 72 bp CTCGCTCAATTCTGTTTCCTTGAGAAAGCAGATATCTaGAAGGCAGCCATGAGCAGGACCTCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LAQFCFLEKADI*KAAMSRTSTGE
Trigger: TTCTCCAGTGGAGGTCCTGCTCATGGCTGCCTTCAAGATATCTGCTTTCTCAAGGAAACAGAATTGAGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGTTGTCCGAATCCTGGTaGCCAATCAAATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: FLINQGFWKFRSGQWGGELSESW*PIKSST
Trigger: GGTAGAAGATTTGATTGGTCACCAGGATTCGGACAA...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGGAGGTGACGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: FLINQGFWKFRSGQWGGEEVTVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCGTCACCTC...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp GGCATTTTAACACTACAGTGGTACCCACACAAGGCACATGGGATGATTAGCACCGGGATAGATGCAGGATaGCCCAGTACCTATGTCAAT +
Preference number: 4 (lower is better)
Translates to: GILTLQWYPHKAHGMISTGIDAG*PSTYVN
Trigger: ATTGACATAGGTACTGGGGCATCCTGCATCTATCCC...GGTGCTAATCATCCCATGTGCCTTGTGTGGGTACCACTGTAGTGTTAAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCTCTCTTGGGGGCTGTaGGCCACGTCTTGGCCACTA +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEILSWGL*ATSWPL
Trigger: TAGTGGCCAAGACGTGGCCCACAGCCCCCAAGAGAG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGCCAAAGATGAAGCTTTaGGAGACAATTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWPKMKL*ETILSS
Trigger: TGATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGG...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CCTGTCTCAAAAGCAACAACAGGGGCTAGGGAGATGGCTAGTTGGCTAAGAGTAACTTTAGGAACCCCTTaGATTCTAAGCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVSKATTGAREMASWLRVTLGTP*ILSSSF
Trigger: GAAGGAAGAGCTTAGAATCCAAGGGGTTCCTAAAGT...TACTCTTAGCCAACTAGCCATCTCCCTAGCCCCTGTTGTTGCTTTTGAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTTCTGGCTGAGGCAATaGCCTCCATCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIFWLRQ*PPSAAA
Trigger: GGCTGCTGCTGATGGAGGCCATTGCCTCAGCCAGAA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
3UTR CAA 72 bp CTGACAAAACTCTGTGAAGGTGACTTTAGGAACCCCTaGGATTCTAAGCTCTTCCTTCAGTGGAGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LTKLCEGDFRNP*DSKLFLQWSQT
Trigger: AGTCTGGCTCCACTGAAGGAAGAGCTTAGAATCCAAGGGGTTCCTAAAGTCACCTTCACAGAGTTTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
3UTR CAA 72 bp GTAAACAGCATGCAAGGGTCACTGCTGACCCTGACCTaGTACCATAAAGAGACAAAGAGTTTCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VNSMQGSLLTLT*YHKETKSFSLS
Trigger: GCTCAAGGAGAAACTCTTTGTCTCTTTATGGTACAAGGTCAGGGTCAGCAGTGACCCTTGCATGCTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp CCTGATCATTTCATGACACACAAGGTGGCTTTGCTCTaGGTCCATAAGCAGTACTCTACAGCTGCCTACCTA +
Preference number: 4 (lower is better)
Translates to: PDHFMTHKVALL*VHKQYSTAAYL
Trigger: TAGGTAGGCAGCTGTAGAGTACTGCTTATGGACCAAGAGCAAAGCCACCTTGTGTGTCATGAAATGATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp TCAGTTCCTGATCATTTCATGACACACAAGGTGGCTTaGCTCTTGGTCCATAAGCAGTACTCTACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVPDHFMTHKVA*LLVHKQYSTAA
Trigger: GGCAGCTGTAGAGTACTGCTTATGGACCAAGAGCAAAGCCACCTTGTGTGTCATGAAATGATCAGGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGTATCTATTTCTTGCATaGATTGATTTGCTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWYLFLA*IDLLRA
Trigger: GGCTCTAAGCAAATCAATGCATGCAAGAAATAGATA...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp ACGTACGTAAGTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAACCCAAGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: TYVSAKLVHQIPILALNPSQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACT...TGGGTTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCACTTACGTACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp TTGGTTTCTGATCACAATGTCATAGATCAGATCTCCAGGGGGAAGGGTTGTGGGAGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: LVSDHNVIDQISRGKGCGSQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACT...CCCACAACCCTTCCCCCTGGAGATCTGATCTATGACATTGTGATCAGAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCGGGAGTCTCCTCCTaGCACAGTAACTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEISGVSS*HSNFWL
Trigger: CAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp GTTACGTACGTAAGTGCAAAGCTGGTTCATCAAATCCCTATTCTGGCCCTCAACATGGCCAGGAAATCTTaGCTTCCAATTGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VTYVSAKLVHQIPILALNMARKS*LPIGWQ
Trigger: TTGCCAACCAATTGGAAGCCAAGATTTCCTGGCCAT...GTTGAGGGCCAGAATAGGGATTTGATGAACCAGCTTTGCACTTACGTACGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCATCAGGAGTGTCTTCTaGGGCACTTTCACCACTTTA +
Preference number: 4 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTIRSVF*GTFTTL
Trigger: TAAAGTGGTGAAAGTGCCGCAGAAGACACTCCTGAT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTTCGGGAGTCTCCTCCTaGCACAGTAACTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NKITLRARWKLISLGDLSSGVSS*HSNFWL
Trigger: CAGCCAGAAGTTACTGTGCCAGGAGGAGACTCCCGA...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp AAACAATGCTGTCGGTGGGTTGGTGGGTACACTTTATaGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTC +
Preference number: 4 (lower is better)
Translates to: KQCCRWVGGYTL*CLSYISEFCLF
Trigger: GAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACCCACCAACCCACCGACAGCATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp GCAGTACAATTGTTACAAAACAATGCTGTCGGTGGGTaGGTGGGTACACTTTATTGTGCCTCAGCTACATCT +
Preference number: 4 (lower is better)
Translates to: AVQLLQNNAVGG*VGTLYCASATS
Trigger: AGATGTAGCTGAGGCACAATAAAGTGTACCCACCAACCCACCGACAGCATTGTTTTGTAACAATTGTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp CTCAGAGATCCCAGGATTTCATTAAGGAAACTAGATTaGACGACTGAGGATGCAGCTCAGTTGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: LRDPRISLRKLD*TTEDAAQLGEH
Trigger: ATGTTCTCCCAACTGAGCTGCATCCTCAGTCGTCAAATCTAGTTTCCTTAATGAAATCCTGGGATCTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp CTTTCACATCTTTCCACACCTGGCCAGTTACTCCTATaGGACCACAGCAGCTTTGATTTCCATCATGAAATG +
Preference number: 4 (lower is better)
Translates to: LSHLSTPGQLLL*DHSSFDFHHEM
Trigger: CATTTCATGATGGAAATCAAAGCTGCTGTGGTCCAATAGGAGTAACTGGCCAGGTGTGGAAAGATGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp AGTTGGCAAGCACATTCACTCAAGGGAAAGTCTAGTTaGATGTTTCAGCAAAAGCTTCGCTGGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SWQAHSLKGKSS*MFQQKLRWVGE
Trigger: TTCTCCAACCCAGCGAAGCTTTTGCTGAAACATCAAACTAGACTTTCCCTTGAGTGAATGTGCTTGCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATAATCTCTGTGATGCCCCCGGTGTTTACAGAACTAGGTGGAGGTCTTCGAGATCAGATAGGTTATTCTaGTCTACATTTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HNLCDAPGVYRTRWRSSRSDRLF*STFFLA
Trigger: TGCCAAGAAAAATGTAGAGCAGAATAACCTATCTGA...TCTCGAAGACCTCCACCTAGTTCTGTAAACACCGGGGGCATCACAGAGATTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp TTTCTCATCAACCAAGGTTTCTGGAAGTTCAGGAGTGGACAGTGGGGAGGTGAGTCAGATAGGTTATTCTaGTCTACATTTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLINQGFWKFRSGQWGGESDRLF*STFFLA
Trigger: TGCCAAGAAAAATGTAGAGCAGAATAACCTATCTGA...CTCACCTCCCCACTGTCCACTCCTGAACTTCCAGAAACCTTGGTTGATGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp GAGCCCAAAGATGAAGCTTTGAGAGACAATTCTTTCATCACAGACTCCAACACTATCAGGAGTGTCTTCTaGGGCACTTTCACCACTTTA +
Preference number: 4 (lower is better)
Translates to: EPKDEALRDNSFITDSNTIRSVF*GTFTTL
Trigger: TAAAGTGGTGAAAGTGCCGCAGAAGACACTCCTGAT...AGTGTTGGAGTCTGTGATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCGTCCTGGGCTCCATTaGTGGAGCCTTTACAACTTT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIRPGLH*WSLYNF
Trigger: AAAGTTGTAAAGGCTCCAGCAATGGAGCCCAGGACG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp ATGCCTTCCGCTGTCTCGGAGCCCAAAGATGAAGCTTTGAGAGACAATTCTTTCATATGCGAAGTCAGGTaGTTTGTCCTTGTATCTATT +
Preference number: 4 (lower is better)
Translates to: MPSAVSEPKDEALRDNSFICEVR*FVLVSI
Trigger: AATAGATACAAGGACAAACCACCTGACTTCGCATAT...GAAAGAATTGTCTCTCAAAGCTTCATCTTTGGGCTCCGAGACAGCGGAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CCA 90 bp TTGGTTTCTGATCACAATGTCATAGATCAGATCTCCAGGGGGAAGGGTTGTGGGATATGCGAAGTCAGGTaGTTTGTCCTTGTATCTATT +
Preference number: 4 (lower is better)
Translates to: LVSDHNVIDQISRGKGCGICEVR*FVLVSI
Trigger: AATAGATACAAGGACAAACCACCTGACTTCGCATAT...CCCACAACCCTTCCCCCTGGAGATCTGATCTATGACATTGTGATCAGAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGGTTCTGCTTTACAACTTTCCATaGCCTCCATCCCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LYCASATSQSFAYSTLVLLYNFP*PPSLPF
Trigger: AAAGGGGAGGGATGGAGGCCATGGAAAGTTGTAAAG...CAGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp TCTCTTGTTGTGTTGTGTCTACACCTGCTCTTTCTGCATCATCAGGAAACTACCATCAAATCCCTATTCTaGCCCTCAACCCAATGCATT +
Preference number: 4 (lower is better)
Translates to: SLVVLCLHLLFLHHQETTIKSLF*PSTQCI
Trigger: AATGCATTGGGTTGAGGGCCAGAATAGGGATTTGAT...GGTAGTTTCCTGATGATGCAGAAAGAGCAGGTGTAGACACAACACAACAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
3UTR CAA 72 bp CTTTTTCATGCAGATTTCCAACGCCTTCCTTCTGTCTaGTGCTATTCCTCAATGCCTACTGCTCATTCCATA +
Preference number: 4 (lower is better)
Translates to: LFHADFQRLPSV*CYSSMPTAHSI
Trigger: TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTGGAAATCTGCATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGGGATAGATGCAGGATaGCCCAGTACCTATGTCAAT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIGIDAG*PSTYVN
Trigger: ATTGACATAGGTACTGGGGCATCCTGCATCTATCCC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCAGTGGAGCCAGACTaGATTTCTTTCCCAGCATAC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEISVEPD*ISFPAY
Trigger: GTATGCTGGGAAAGAAATGCAGTCTGGCTCCACTGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp GACCATAGCGATACTGCTCTTGTCAAACGTTTTCAAATTCTAGGAACATTATCTCGTCCTGGGCTCCATTaGTGGAGCCTTTACAACTTT +
Preference number: 4 (lower is better)
Translates to: DHSDTALVKRFQILGTLSRPGLH*WSLYNF
Trigger: AAAGTTGTAAAGGCTCCAGCAATGGAGCCCAGGACG...AGATAATGTTCCTAGAATTTGAAAACGTTTGACAAGAGCAGTATCGCTATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGTCTCAAGGGGACTGTaGGAATTAGTCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIVSRGL*ELVSPK
Trigger: CTTTGGAGAGACTAATTCCCACAGTCCCCTTGAGAC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGGTTCTGGGGAATTTACACCCTTaGCTTCCAATTGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LYCASATSQSFAYSTLVLGNLHP*LPIGWQ
Trigger: TTGCCAACCAATTGGAAGCCAAGGGTGTAAATTCCC...CAGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTAAGGAGTGGACAGCATaGCAACTGCCTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIKEWTA*QLPLLL
Trigger: CAACAAAAGAGGCAGTTGCCATGCTGTCCACTCCTT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000010698.13
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCTTTACAACTTTCCATaGCCTCCATCCCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEILYNFP*PPSLPF
Trigger: AAAGGGGAGGGATGGAGGCCATGGAAAGTTGTAAAG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTTGTCCGAATCCTGGTaGCCAATCAAATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEILSESW*PIKSST
Trigger: GGTAGAAGATTTGATTGGTCACCAGGATTCGGACAA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGAGGTGACGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIEVTVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCGTCACCTC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CAGCATACAGCTATACCACCTGTTTTTGTTGTGAGGGAAACACAGGTTCTCCTGTATCTATTTCTTGCATaGATTGATTTGCTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QHTAIPPVFVVRETQVLLYLFLA*IDLLRA
Trigger: GGCTCTAAGCAAATCAATGCATGCAAGAAATAGATA...CAGGAGAACCTGTGTTTCCCTCACAACAAAAACAGGTGGTATAGCTGTATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTATCAGGAGTGTCTTCTaGGGCACTTTCACCACTTTA +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIIRSVF*GTFTTL
Trigger: TAAAGTGGTGAAAGTGCCGCAGAAGACACTCCTGAT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGGGAATTTACACCCTTaGCTTCCAATTGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIGNLHP*LPIGWQ
Trigger: TTGCCAACCAATTGGAAGCCAAGGGTGTAAATTCCC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGTTTACAGAACTAGGTaGAGGTCTTCGAGAATTCCG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIVYRTR*RSSRIP
Trigger: CGGAATTCTCGAAGACCTCCACCTAGTTCTGTAAAC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CAACGCCTTCCTTCTGTCTTGTGCTATTCCTCAATGCCTACTGCTCATTCCATAAGCTGTAAACTGTCATaGATGATCCTTTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: QRLPSVLCYSSMPTAHSISCKLS*MILLTN
Trigger: ATTTGTCAAAAGGATCATCCATGACAGTTTACAGCT...TATGGAATGAGCAGTAGGCATTGAGGAATAGCACAAGACAGAAGGAAGGCGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTAAGCTCTTCCTTCAGTaGAGCCAGACTGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIKLFLQ*SQTAFL
Trigger: AAGAAATGCAGTCTGGCTCCACTGAAGGAAGAGCTT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCACTACTCAGCTCTTTaGGAGTGGACTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIHYSAL*EWTFSL
Trigger: AAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp GGTACACTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGCTCTTCCGCCTTAAATaGATCCAAGAGTTTTCTATG +
Preference number: 4 (lower is better)
Translates to: GTLYCASATSQSFAYSTLLFRLK*IQEFSM
Trigger: CATAGAAAACTCTTGGATTCATTTAAGGCGGAAGAG...CAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTAGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEISQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTCACTACTCAGCTCTTTaGGAGTGGACTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NKITLRARWKLISLGDLSHYSAL*EWTFSL
Trigger: AAGAGAGAAAGTCCACTCCCAAAGAGCTGAGTAGTG...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTATCAAATCCCTATTCTaGCCCTCAACCCAATGCATT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIIKSLF*PSTQCI
Trigger: AATGCATTGGGTTGAGGGCCAGAATAGGGATTTGAT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR TCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCTCTTCCGCCTTAAATaGATCCAAGAGTTTTCTATG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEILFRLK*IQEFSM
Trigger: CATAGAAAACTCTTGGATTCATTTAAGGCGGAAGAG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTATCTGGATATTTAGATaGCAGATATGCGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIIWIFR*QICEVR
Trigger: CCTGACTTCGCATATCTGGCATCTAAATATCCAGAT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGGTTACGTACGTAAGTaGAAAGCTGGTTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIGYVRK*KAGSSN
Trigger: ATTTGATGAACCAGCTTTGCACTTACGTACGTAACC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp GAGCCCAAAGATGAAGCTTTGAGAGACAATTCTTTCATCACAGACTCCAACACTTATAGCCCAATCTGTTaGTTTTCCTTTATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPKDEALRDNSFITDSNTYSPIC*FSFMLS
Trigger: AGAAAGCATAAAGGAAAAGCAACAGATTGGGCTATA...AGTGTTGGAGTCTGTGATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR TCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCCAAAGATGAAGCTTTaGGAGACAATTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIPKMKL*ETILSS
Trigger: TGATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTGGTTACGTACGTAAGTaGAAAGCTGGTTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: NKITLRARWKLISLGDLSGYVRK*KAGSSN
Trigger: ATTTGATGAACCAGCTTTGCACTTACGTACGTAACC...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTATATGCGAAGTCAGGTaGTTTGTCCTTGTATCTATT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIICEVR*FVLVSI
Trigger: AATAGATACAAGGACAAACCACCTGACTTCGCATAT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
3UTR CAA 72 bp GTTTCAGGAGAGTCAAGGCTACAGAGAAAGCTTGTCTaGAGAAATGAAACAAAACAATGTCATCTCATTAGA +
Preference number: 4 (lower is better)
Translates to: VSGESRLQRKLV*RNETKQCHLIR
Trigger: TCTAATGAGATGACATTGTTTTGTTTCATTTCTCAAGACAAGCTTTCTCTGTAGCCTTGACTCTCCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTATCTATTTCTTGCATaGATTGATTTGCTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEIYLFLA*IDLLRA
Trigger: GGCTCTAAGCAAATCAATGCATGCAAGAAATAGATA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR GCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCAGATAGGTTATTCTaGTCTACATTTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEISDRLF*STFFLA
Trigger: TGCCAAGAAAAATGTAGAGCAGAATAACCTATCTGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CCA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTAGCTGTAAACTGTCATaGATGATCCTTTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: HCIISLAPYITFLTEEEISCKLS*MILLTN
Trigger: ATTTGTCAAAAGGATCATCCATGACAGTTTACAGCT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp ACATCCCCTTCTCCCCTTCCTCAGGGCACTCCCGATGGTGCCCAAGACGCCTCCCCGTCCTGGGCTCCATaGCTGGAGCCTTTACAACTT +
Preference number: 5 (lower is better)
Translates to: TSPSPLPQGTPDGAQDASPSWAP*LEPLQL
Trigger: AAGTTGTAAAGGCTCCAGCAATGGAGCCCAGGACGG...GGAGGCGTCTTGGGCACCATCGGGAGTGCCCTGAGGAAGGGGAGAAGGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CACAGTGTGACTCAAGAGGCAGCTGGATCACTCAGGGGTGGAGATGTGCTGAGAACACAGGGCACTCTCTaGGGGGCTGTGGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: HSVTQEAAGSLRGGDVLRTQGTL*GAVGHV
Trigger: GACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGT...TCTCAGCACATCTCCACCCCTGAGTGATCCAGCTGCCTCTTGAGTCACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CCTCCATCAGCAGCAGCCTCGCCGCCCGGCACATCAAGCCCACACAGGGCACTCTCAGGTGGTTTGTCCTaGTATCTATTTCTTGCATGC +
Preference number: 5 (lower is better)
Translates to: PPSAAASPPGTSSPHRALSGGLS*YLFLAC
Trigger: GCATGCAAGAAATAGATACAAGGACAAACCACCTGA...GAGTGCCCTGTGTGGGCTTGATGTGCCGGGCGGCGAGGCTGCTGCTGATGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CAA 90 bp CCCGAGGCACCTCCCGCAGCTGCCTCACTCGCTCTCTTCTCTTCCGCCTTAAATCATGGCCAGGAAATCTaGGCTTCCAATTGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PEAPPAAASLALFSSALNHGQEI*ASNWLA
Trigger: TGCCAACCAATTGGAAGCCAAGATTTCCTGGCCATG...ATTTAAGGCGGAAGAGAAGAGAGCGAGTGAGGCAGCTGCGGGAGGTGCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CAA 90 bp CATGGAAGTGTATGTTACCCCAGACCCTTTCCAGTGGGCAAAGTAAGGGGGTGGCTAAGGCCCATCTCATaGTCCGACCCTGACAAAACT +
Preference number: 5 (lower is better)
Translates to: HGSVCYPRPFPVGKVRGWLRPIS*SDPDKT
Trigger: AGTTTTGTCAGGGTCGGACAATGAGATGGGCCTTAG...CCACCCCCTTACTTTGCCCACTGGAAAGGGTCTGGGGTAACATACACTTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp GGTGACAGACACTTTCTAGGCAGCCCTGACCCACACCAGATGCCACCAGAGCCCTCTTTTCTATCCATGTaGTTACAACCACTATGCCTT +
Preference number: 5 (lower is better)
Translates to: GDRHFLGSPDPHQMPPEPSFLSM*LQPLCL
Trigger: AAGGCATAGTGGTTGTAACAACATGGATAGAAAAGA...GGGCTCTGGTGGCATCTGGTGTGGGTCAGGGCTGCCTAGAAAGTGTCTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp TGTGTCCTTCTAGGGATATCAGACCAGGAGCTCATGGGTGGGGACAGTCCTTGTACCAGCCATTTAAGGTaGCTCCAAGTAAGGGATAGA +
Preference number: 5 (lower is better)
Translates to: CVLLGISDQELMGGDSPCTSHLR*LQVRDR
Trigger: TCTATCCCTTACTTGGAGCAACCTTAAATGGCTGGT...ACAAGGACTGTCCCCACCCATGAGCTCCTGGTCTGATATCCCTAGAAGGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTACACAGGGCACTCTCTaGGGGGCTGTGGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEITQGTL*GAVGHV
Trigger: GACGTGGCCCACAGCCCCCAAGAGAGTGCCCTGTGT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS CCA 90 bp TTCTGCCATAATCTCTGTGATGCCCCCGGTGTTTACAGAACTAGGTaGAGGTCTTCGAGAATTCCGGGAATTTACACCCTTGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: FCHNLCDAPGVYRTR*RSSRIPGIYTLGFQ
Trigger: TTGGAAGCCAAGGGTGTAAATTCCCGGAATTCTCGAAGACCTCCACCTAGTTCTGTAAACACCGGGGGCATCACAGAGATTATGGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp TCTGTGATGCCCCCGGTGTTTACAGAACTAGGTGGAGGTCTTCGAGAATTCCGGGCGAAGTCAGGTGGTTaGTCCTTGTATCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: SVMPPVFTELGGGLREFRAKSGG*SLYLFL
Trigger: AAGAAATAGATACAAGGACAAACCACCTGACTTCGC...CCGGAATTCTCGAAGACCTCCACCTAGTTCTGTAAACACCGGGGGCATCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS-3UTR CAA 90 bp CCGACAGAGCCACACACTTACAGCTCCAGTGCTCTAGGAAATGACTTCCCTGACTCATGGATGATCCTTTaGACAAATTCTAGCTCACCT +
Preference number: 5 (lower is better)
Translates to: PTEPHTYSSSALGNDFPDSWMIL*TNSSSP
Trigger: AGGTGAGCTAGAATTTGTCAAAAGGATCATCCATGA...GTCAGGGAAGTCATTTCCTAGAGCACTGGAGCTGTAAGTGTGTGGCTCTGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp AGACTTCTCCAAAGAGATCTGCAGAACCCTGGCATTCCCATTAGAAATGTGTTTCGGGAATTTACACCCTaGGCTTCCAATTGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RLLQRDLQNPGIPIRNVFREFTP*ASNWLA
Trigger: TGCCAACCAATTGGAAGCCAAGGGTGTAAATTCCCG...AAACACATTTCTAATGGGAATGCCAGGGTTCTGCAGATCTCTTTGGAGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCCGTCCTGGGCTCCATaGCTGGAGCCTTTACAACTT +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEIPSWAP*LEPLQL
Trigger: AAGTTGTAAAGGCTCCAGCAATGGAGCCCAGGACGG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CCTGTCTCAAAAGCAACAACAGGGGCTAGGGAGATGGCTAGTTGGCTAAGAGTAGCTTCCTTCTTAATGTaGACTAAACACTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: PVSKATTGAREMASWLRVASFLM*TKHLNR
Trigger: CCTGTTTAAGTGTTTAGTCAACATTAAGAAGGAAGC...TACTCTTAGCCAACTAGCCATCTCCCTAGCCCCTGTTGTTGCTTTTGAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS GCA 90 bp AAGTCCAAAGTCCTCTCTCAGGAGAGTACAAGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATTAAGACTTACTCTCCCATTCAGATT +
Preference number: 5 (lower is better)
Translates to: KSKVLSQESTSQSSD*FGVFKIKTYSPIQI
Trigger: AATCTGAATGGGAGAGTAAGTCTTAATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACTTGTACTCTCCTGAGAGAGGACTTTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCGGGAATTTACACCCTaGGCTTCCAATTGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEIREFTP*ASNWLA
Trigger: TGCCAACCAATTGGAAGCCAAGGGTGTAAATTCCCG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCTAAGGCCCATCTCATaGTCCGACCCTGACAAAACT +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEILRPIS*SDPDKT
Trigger: AGTTTTGTCAGGGTCGGACAATGAGATGGGCCTTAG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CAGCATACAGCTATACCACCTGTTTTTGTTGTGAGGGAAACACAGGTTCTCCTGTTTATGCTTTCTGTCTaGATACCATGGCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: QHTAIPPVFVVRETQVLLFMLSV*IPWPGN
Trigger: ATTTCCTGGCCATGGTATCAAGACAGAAAGCATAAA...CAGGAGAACCTGTGTTTCCCTCACAACAAAAACAGGTGGTATAGCTGTATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12
CDS CCA 90 bp GAAATACAGAAAGGATATAAGACTGCACTTCAGCCAATAAAGGAGTaGACAGCATGGCAACTGCCTCTTTTGTTGAAAGTGACGAAACTC +
Preference number: 5 (lower is better)
Translates to: EIQKGYKTALQPIKE*TAWQLPLLLKVTKL
Trigger: GAGTTTCGTCACTTTCAACAAAAGAGGCAGTTGCCATGCTGTCCACTCCTTTATTGGCTGAAGTGCAGTCTTATATCCTTTCTGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010698.13
CDS-3UTR CAA 90 bp CTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGGTTCTGTCAGGTGGTTTGTCCTaGTATCTATTTCTTGCATGC +
Preference number: 5 (lower is better)
Translates to: LYCASATSQSFAYSTLVLSGGLS*YLFLAC
Trigger: GCATGCAAGAAATAGATACAAGGACAAACCACCTGA...CAGAACCAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTACCAGCCATTTAAGGTaGCTCCAAGTAAGGGATAGA +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEITSHLR*LQVRDR
Trigger: TCTATCCCTTACTTGGAGCAACCTTAAATGGCTGGT...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCAGGTGGTTTGTCCTaGTATCTATTTCTTGCATGC +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEISGGLS*YLFLAC
Trigger: GCATGCAAGAAATAGATACAAGGACAAACCACCTGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGCGAAGTCAGGTGGTTaGTCCTTGTATCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEIAKSGG*SLYLFL
Trigger: AAGAAATAGATACAAGGACAAACCACCTGACTTCGC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp AATAAGATCACACTCAGAGCAAGATGGAAACTCATTTCTCTAGGAGATCTATCTACCAGCCATTTAAGGTaGCTCCAAGTAAGGGATAGA +
Preference number: 5 (lower is better)
Translates to: NKITLRARWKLISLGDLSTSHLR*LQVRDR
Trigger: TCTATCCCTTACTTGGAGCAACCTTAAATGGCTGGT...AGATAGATCTCCTAGAGAAATGAGTTTCCATCTTGCTCTGAGTGTGATCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp GGTACACTTTATTGTGCCTCAGCTACATCTCAGAGTTTTGCTTATTCAACTCTGCCCAAAGATGAAGCTTaGAGAGACAATTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: GTLYCASATSQSFAYSTLPKDEA*RDNSFI
Trigger: GATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGGG...CAGAGTTGAATAAGCAAAACTCTGAGATGTAGCTGAGGCACAATAAAGTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCATGGATGATCCTTTaGACAAATTCTAGCTCACCT +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEISWMIL*TNSSSP
Trigger: AGGTGAGCTAGAATTTGTCAAAAGGATCATCCATGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTCCCAAAGATGAAGCTTaGAGAGACAATTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEIPKDEA*RDNSFI
Trigger: GATGAAAGAATTGTCTCTCAAAGCTTCATCTTTGGG...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTTCTTTTCTATCCATGTaGTTACAACCACTATGCCTT +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEISFLSM*LQPLCL
Trigger: AAGGCATAGTGGTTGTAACAACATGGATAGAAAAGA...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS-3UTR CAA 90 bp CATTGCATCATATCCCTAGCCCCATACATCACTTTTCTAACTGAGGAAGAAATTGCTTCCTTCTTAATGTaGACTAAACACTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: HCIISLAPYITFLTEEEIASFLM*TKHLNR
Trigger: CCTGTTTAAGTGTTTAGTCAACATTAAGAAGGAAGC...AATTTCTTCCTCAGTTAGAAAAGTGATGTATGGGGCTAGGGATATGATGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000010698.13
ENSMUST00000141755.8
CDS GCA 72 bp GTCCTCTCTCAGGAGAGTACAAGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATTAAGACTTACTCTCCC +
Preference number: 6 (lower is better)
Translates to: VLSQESTSQSSD*FGVFKIKTYSP
Trigger: GGGAGAGTAAGTCTTAATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACTTGTACTCTCCTGAGAGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS GCA 72 bp ACCAGCCATTTAAGGTTGCTCCAAGTAAGGGATAGATaGAGGATGCCCCAGTACCTATGTCAATTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TSHLRLLQVRDR*RMPQYLCQFLF
Trigger: GAAGAGGAATTGACATAGGTACTGGGGCATCCTGCATCTATCCCTTACTTGGAGCAACCTTAAATGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS GCA 72 bp GACTCTTCCTTAAGCGCATCCATCAGGAGTGTCTTCTaGGGCACTTTCACCACTTTAATGAGATCAGATAGG +
Preference number: 6 (lower is better)
Translates to: DSSLSASIRSVF*GTFTTLMRSDR
Trigger: CCTATCTGATCTCATTAAAGTGGTGAAAGTGCCGCAGAAGACACTCCTGATGGATGCGCTTAAGGAAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000010698.13
ENSMUST00000092912.12
ENSMUST00000141755.8
CDS CCA 72 bp AAGACTGCACTTCAGCCAATAAAGGAGTGGACAGCATaGCAACTGCCTCTTTTGTTGAAAGTGACGAAACTC +
Preference number: 6 (lower is better)
Translates to: KTALQPIKEWTA*QLPLLLKVTKL
Trigger: GAGTTTCGTCACTTTCAACAAAAGAGGCAGTTGCCATGCTGTCCACTCCTTTATTGGCTGAAGTGCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010698.13
CDS TCA 72 bp GCCCAATCTGTTGCTTTTCCTTTATGCTTTCTGTCTTaGTACCATGGCCAGGAAATCTTGGCTTCCAATTGG +
Preference number: 6 (lower is better)
Translates to: AQSVAFPLCFLS*YHGQEILASNW
Trigger: CCAATTGGAAGCCAAGATTTCCTGGCCATGGTATCAAGACAGAAAGCATAAAGGAAAAGCAACAGATTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092912.12