Pregenerated sensors for METTL11B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040113Ensembl transcript IDs: ENSMUST00000159679.8, ENSMUST00000160495.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTGCCTGTCACTGTGCAGTGCAAACATCCACACCGGAACACACTaGTCTGGGAAACCCTCTTGTTTCTCCTGGCCCAGAACCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: ECLSLCSANIHTGTH*SGKPSCFSWPRTTS Trigger: ACTGGTGGTTCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTGGATGTTTGCACTGCACAGTGACAGGCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 90 bp | CCTGTCACTGTGCAGTGCAAACATCCACACCGGAACACACTGCTCTaGGAAACCCTCTTGTTTCTCCTGGCCCAGAACCACCAGTCCACT | + |
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Preference number: 1 (lower is better) Translates to: PVTVQCKHPHRNTLL*ETLLFLLAQNHQST Trigger: AGTGGACTGGTGGTTCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTGGATGTTTGCACTGCACAGTGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 90 bp | ATCCACACCGGAACACACTGCTCTGGGAAACCCTCTTGTTTCTCCTaGCCCAGAACCACCAGTCCACTCTTCCTAATAAGGCTTCGAAGG | + |
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Preference number: 1 (lower is better) Translates to: IHTGTHCSGKPSCFS*PRTTSPLFLIRLRR Trigger: CCTTCGAAGCCTTATTAGGAAGAGTGGACTGGTGGTTCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR GCA 90 bp | CCGAGTCACACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCGTaGCACATTGTCCTTCAGTATGATAACACCATTTTCTTTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: PSHTAVRQVEDTALP*HIVLQYDNTIFFQA Trigger: GGCCTGAAAGAAAATGGTGTTATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGACAGCAGTGTGACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 90 bp | ATTGTATCCCTTCTTTCCATATCTGTCTCCATCACACAGGGTGCCTaGGAGATACGCCCAATTCCGAAGCACCATCGTTCAGTCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: IVSLLSISVSITQGA*EIRPIPKHHRSVWW Trigger: CCACCAGACTGAACGATGGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATATGGAAAGAAGGGATACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR CCA 90 bp | ATTCAACACTGCCCAACAAATTTCCTAAGAAATTCACGAGAGGCTTaGATATCTGGGTTGGATAATTCAATAAAATTTCCCATCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: IQHCPTNFLRNSREA*ISGLDNSIKFPIMP Trigger: AGGCATGATGGGAAATTTTATTGAATTATCCAACCCAGATATCCAAGCCTCTCGTGAATTTCTTAGGAAATTTGTTGGGCAGTGTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCGAGTCACACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCGTGCCACATCATGCCTTCTTCTGTaGCTGGTACTTCTTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SRVTLLSDRSKIQPSRATSCLLL*LVLLGR Trigger: TCTACCAAGAAGTACCAGCCACAGAAGAAGGCATGA...TGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGACAGCAGTGTGACTCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGAGTCACACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCGTGCCACATCTTGGTAGAAAAGTTTaGCTCTGGCATAGAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: PESHCCQTGRRYSPPVPHLGRKV*LWHRTA Trigger: TGCAGTTCTATGCCAGAGCCAAACTTTTCTACCAAG...ATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGACAGCAGTGTGACTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CAA 90 bp | ACACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCGTGCCACATaGTCCTTCAGTATGATAACACCATTTTCTTTCAGGCCATCTCGA | + |
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Preference number: 2 (lower is better) Translates to: TLLSDRSKIQPSRAT*SFSMITPFSFRPSR Trigger: TCGAGATGGCCTGAAAGAAAATGGTGTTATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGACAGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR TCA 90 bp | TTCGAAGGATGTCCATGTCCCGAGTCACACTGCTGTCAGACAGGTCGAAGATACTACCCTGAGACCCACTaGATCCAGATGACATCATAT | + |
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Preference number: 2 (lower is better) Translates to: FEGCPCPESHCCQTGRRYYPETH*IQMTSY Trigger: ATATGATGTCATCTGGATTCAGTGGGTCTCAGGGTA...GTATCTTCGACCTGTCTGACAGCAGTGTGACTCGGGACATGGACATCCTTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCATGTCCCGAGTCACACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCCACCAATTCAACACTaGCCAACAAATTTCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: MSMSRVTLLSDRSKIQPSPPIQH*PTNFLR Trigger: TCTTAGGAAATTTGTTGGGCAGTGTTGAATTGGTGG...GGAGGGCTGTATCTTCGACCTGTCTGACAGCAGTGTGACTCGGGACATGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGTCGAAGATACAGCCCTCCCGTGCCACATTGTCCTTCAGTATGATAACACCCACTGAATCCAGATaGCATCATATCTCCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: DRSKIQPSRATLSFSMITPTESR*HHISLS Trigger: ACTTAGGGAGATATGATGTCATCTGGATTCAGTGGG...TGTTATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CAA 90 bp | GCAAGAGCTCGTACATACTACGTCATCAATCATTCTAGACATGCATaGTATCCCTTCTTTCCATATCTGTCTCCATCACACAGGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ARARTYYVINHSRHA*YPFFPYLSPSHRVP Trigger: AGGCACCCTGTGTGATGGAGACAGATATGGAAAGAAGGGATACAATGCATGTCTAGAATGATTGATGACGTAGTATGTACGAGCTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACATTGTCCTTCAGTATGATAACACCATTTTCTTTCAGGCCATCTCGACACGCCTTCTTCTGTGGCTaGTACTTCTTGGTAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ATLSFSMITPFSFRPSRHAFFCG*YFLVEK Trigger: CTTTTCTACCAAGAAGTACCAGCCACAGAAGAAGGC...GTGTCGAGATGGCCTGAAAGAAAATGGTGTTATCATACTGAAGGACAATGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCAAGAAGGTCCTTATCAGTCAGGTACCCTGAGACCCACTGAATCCAGAAATTCACGAGAGGCTTaGATATCTGGGTTGGATAAT | + |
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Preference number: 2 (lower is better) Translates to: EMQEGPYQSGTLRPTESRNSREA*ISGLDN Trigger: ATTATCCAACCCAGATATCCAAGCCTCTCGTGAATT...TCTGGATTCAGTGGGTCTCAGGGTACCTGACTGATAAGGACCTTCTTGCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTATGATAACACCATTTTCTTTCAGGCCATCTCGACACCGGGAAAGAAATGCGCATCTCACCATCAATaGCTTGGCTTGTTAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QYDNTIFFQAISTPGKKCASHHQ*LGLLKH Trigger: ATGCTTTAACAAGCCAAGTCATTGATGGTGAGATGC...GCATTTCTTTCCCGGTGTCGAGATGGCCTGAAAGAAAATGGTGTTATCATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTATGATAACACCATTTTCTTTCAGGCCATCTCGACACCGGGAAAGAAATGCAGAAAAGTTTGGCTCTaGCATAGAACTGCATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: QYDNTIFFQAISTPGKKCRKVWL*HRTASH Trigger: GTGAGATGCAGTTCTATGCCAGAGCCAAACTTTTCT...GCATTTCTTTCCCGGTGTCGAGATGGCCTGAAAGAAAATGGTGTTATCATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CAA 90 bp | TTCAATAAAATTTCCCATCATGCCTTCTTCTGTGGCTGGTACTTCTaGGTAGAAAAGTTTGGCTCTGGCATAGAACTGCATCTCACCATC | + |
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Preference number: 2 (lower is better) Translates to: FNKISHHAFFCGWYF*VEKFGSGIELHLTI Trigger: GATGGTGAGATGCAGTTCTATGCCAGAGCCAAACTTTTCTACCAAGAAGTACCAGCCACAGAAGAAGGCATGATGGGAAATTTTATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CAA 90 bp | AACGAGCTAAAGACAAAATTAATAGACTTGTATTCATGGGGTTATTaGACCAGTCCCTTCTTAGTTAGGTCAAGATGTTTCTTCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NELKTKLIDLYSWGY*TSPFLVRSRCFFKR Trigger: TCTCTTGAAGAAACATCTTGACCTAACTAAGAAGGGACTGGTCAAATAACCCCATGAATACAAGTCTATTAATTTTGTCTTTAGCTCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR CCA 72 bp | GTGCAGTGCAAACATCCACACCGGAACACACTGCTCTaGGAAACCCTCTTGTTTCTCCTGGCCCAGAACCAC | + |
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Preference number: 3 (lower is better) Translates to: VQCKHPHRNTLL*ETLLFLLAQNH Trigger: GTGGTTCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTGGATGTTTGCACTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR GCA 72 bp | TCACTGTGCAGTGCAAACATCCACACCGGAACACACTaGTCTGGGAAACCCTCTTGTTTCTCCTGGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SLCSANIHTGTH*SGKPSCFSWPR Trigger: TCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTGGATGTTTGCACTGCACAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR GCA 72 bp | CTCATTCCCACTGCTGATCAAGAGTGCCTGTCACTGTaGAGTGCAAACATCCACACCGGAACACACTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LIPTADQECLSL*SANIHTGTHCS Trigger: AGAGCAGTGTGTTCCGGTGTGGATGTTTGCACTGCACAGTGACAGGCACTCTTGATCAGCAGTGGGAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 72 bp | GGAACACACTGCTCTGGGAAACCCTCTTGTTTCTCCTaGCCCAGAACCACCAGTCCACTCTTCCTAATAAGG | + |
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Preference number: 3 (lower is better) Translates to: GTHCSGKPSCFS*PRTTSPLFLIR Trigger: CCTTATTAGGAAGAGTGGACTGGTGGTTCTGGGCCAGGAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 72 bp | CTTCTTTCCATATCTGTCTCCATCACACAGGGTGCCTaGGAGATACGCCCAATTCCGAAGCACCATCGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LLSISVSITQGA*EIRPIPKHHRS Trigger: TGAACGATGGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATATGGAAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR GCA 72 bp | ACTGCTGTCAGACAGGTCGAAGATACAGCCCTCCCGTaGCACATTGTCCTTCAGTATGATAACACCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: TAVRQVEDTALP*HIVLQYDNTIF Trigger: GAAAATGGTGTTATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGACAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGCAGTGGTAACTTTCAACTTTGTCCTCGTTAACCTGCAAGTAGCTCTGGGCAGCATACAATTTTACTaGGTGAAGAGTGTTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: VAVVTFNFVLVNLQVALGSIQFY*VKSVIW Trigger: CCAGATAACACTCTTCACCAAGTAAAATTGTATGCT...GCCCAGAGCTACTTGCAGGTTAACGAGGACAAAGTTGAAAGTTACCACTGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCATCATGTCCACCAATTCAACACTGCCCAACAAATTTCCTAAGAAATTCATGTGGCTGGTACTTCTaGGTAGAAAAGTTTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: IPSCPPIQHCPTNFLRNSCGWYF*VEKFGS Trigger: AGAGCCAAACTTTTCTACCAAGAAGTACCAGCCACA...TGAATTTCTTAGGAAATTTGTTGGGCAGTGTTGAATTGGTGGACATGATGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 72 bp | TGCCCAACAAATTTCCTAAGAAATTCACGAGAGGCTTaGATATCTGGGTTGGATAATTCAATAAAATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: CPTNFLRNSREA*ISGLDNSIKFP Trigger: GGGAAATTTTATTGAATTATCCAACCCAGATATCCAAGCCTCTCGTGAATTTCTTAGGAAATTTGTTGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| 3UTR CCA 72 bp | AACGAGCTAAAGACAAAATTAATAGACTTGTATTCATaGGGTTATTTGACCAGTCCCTTCTTAGTTAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: NELKTKLIDLYS*GYLTSPFLVRS Trigger: TGACCTAACTAAGAAGGGACTGGTCAAATAACCCCATGAATACAAGTCTATTAATTTTGTCTTTAGCTCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | TATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGAAGCACCTGTCCCGAGTCACACTaGTGTCAGACAGGTCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: YLSPSHRVPGRYAQFRSTCPESH*CQTGRR Trigger: TCTTCGACCTGTCTGACAGCAGTGTGACTCGGGACA...GGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | TACGCCCAATTCCGAAGCACCATCGTTCAGTCTGGTGGCTCATTCCCACTGCTGGAGTGCCTGTCACTGTaGAGTGCAAACATCCACACC | + |
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Preference number: 4 (lower is better) Translates to: YAQFRSTIVQSGGSFPLLECLSL*SANIHT Trigger: GGTGTGGATGTTTGCACTGCACAGTGACAGGCACTC...CAGCAGTGGGAATGAGCCACCAGACTGAACGATGGTGCTTCGGAATTGGGCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | TATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGAAGCACCGATACAGCCCTCCCGTaGCACATTGTCCTTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: YLSPSHRVPGRYAQFRSTDTALP*HIVLQY Trigger: ATACTGAAGGACAATGTGGCACGGGAGGGCTGTATC...GGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | GTCAGACAGGTCGAAGATACAGCCCTCCCGTGCCACATTGTCCTTCAGTATGATTCGTCGTCGGTCTTCTaGCAACGGGATCTAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VRQVEDTALPCHIVLQYDSSSVF*QRDLKA Trigger: TGCCTTTAGATCCCGTTGGCAGAAGACCGACGACGA...ATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| CDS-3UTR TCA 90 bp | TATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGAAGCACCTACCCTGAGACCCACTaGATCCAGATGACATCATAT | + |
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Preference number: 4 (lower is better) Translates to: YLSPSHRVPGRYAQFRSTYPETH*IQMTSY Trigger: ATATGATGTCATCTGGATTCAGTGGGTCTCAGGGTA...GGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | TTTCCATATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGACGGAACACACTGCTCTaGGAAACCCTCTTGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPYLSPSHRVPGRYAQFRRNTLL*ETLLFL Trigger: GAGAAACAAGAGGGTTTCCCAGAGCAGTGTGTTCCG...TCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATATGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR TCA 90 bp | TACGCCCAATTCCGAAGCACCATCGTTCAGTCTGGTGGCTCATTCCCACTGCTGGCATCTCACCATCAATaGCTTGGCTTGTTAAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: YAQFRSTIVQSGGSFPLLASHHQ*LGLLKH Trigger: ATGCTTTAACAAGCCAAGTCATTGATGGTGAGATGC...CAGCAGTGGGAATGAGCCACCAGACTGAACGATGGTGCTTCGGAATTGGGCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | TATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGAAGCACCAGAAAAGTTTGGCTCTaGCATAGAACTGCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: YLSPSHRVPGRYAQFRSTRKVWL*HRTASH Trigger: GTGAGATGCAGTTCTATGCCAGAGCCAAACTTTTCT...GGTGCTTCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | TTTCCATATCTGTCTCCATCACACAGGGTGCCTGGGAGATACGCCCAATTCCGATCATGCCTTCTTCTGTaGCTGGTACTTCTTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: FPYLSPSHRVPGRYAQFRSCLLL*LVLLGR Trigger: TCTACCAAGAAGTACCAGCCACAGAAGAAGGCATGA...TCGGAATTGGGCGTATCTCCCAGGCACCCTGTGTGATGGAGACAGATATGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR TCA 90 bp | ACCACCAGTCCACTCTTCCTAATAAGGCTTCGAAGGATGTCCATGTCCCGAGTCTTGCGAATGGCTTTGTaGAGGATAAAGGACATGCTA | + |
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Preference number: 4 (lower is better) Translates to: TTSPLFLIRLRRMSMSRVLRMAL*RIKDML Trigger: TAGCATGTCCTTTATCCTTCACAAAGCCATTCGCAA...GACTCGGGACATGGACATCCTTCGAAGCCTTATTAGGAAGAGTGGACTGGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| CDS-3UTR GCA 90 bp | TTCTCAGGTCTTCATATACACACTTGTGCAGTGAAGGCGTGTGTAAACATGCACTCGTCGTCGGTCTTCTaGCAACGGGATCTAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSGLHIHTCAVKACVNMHSSSVF*QRDLKA Trigger: TGCCTTTAGATCCCGTTGGCAGAAGACCGACGACGA...GTGCATGTTTACACACGCCTTCACTGCACAAGTGTGTATATGAAGACCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | CTGATAGAGGAACAGAAAGAGTGGTCTAGACTTTCCACTCTGTTCTGTGATAGACACACCGGAACACACTaGTCTGGGAAACCCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LIEEQKEWSRLSTLFCDRHTGTH*SGKPSC Trigger: ACAAGAGGGTTTCCCAGAGCAGTGTGTTCCGGTGTG...TCTATCACAGAACAGAGTGGAAAGTCTAGACCACTCTTTCTGTTCCTCTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR CAA 72 bp | TCAGACAGGTCGAAGATACAGCCCTCCCGTGCCACATaGTCCTTCAGTATGATAACACCATTTTCTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SDRSKIQPSRAT*SFSMITPFSFR Trigger: CCTGAAAGAAAATGGTGTTATCATACTGAAGGACAATGTGGCACGGGAGGGCTGTATCTTCGACCTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| CDS-3UTR GCA 90 bp | GGTTATTTGACCAGTCCCTTCTTAGTTAGGTCAAGATGTTTCTTCAAGAGACACCCTGTCACTGTGCAGTaGAAACATCCACACCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GYLTSPFLVRSRCFFKRHPVTVQ*KHPHRN Trigger: GTTCCGGTGTGGATGTTTGCACTGCACAGTGACAGG...GTGTCTCTTGAAGAAACATCTTGACCTAACTAAGAAGGGACTGGTCAAATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR GCA 90 bp | CTGATAGAGGAACAGAAAGAGTGGTCTAGACTTTCCACTCTGTTCTGTGATAGAACAGGCAACAAGACGTaGTTGCTGACCCTTCCTATT | + |
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Preference number: 4 (lower is better) Translates to: LIEEQKEWSRLSTLFCDRTGNKT*LLTLPI Trigger: AATAGGAAGGGTCAGCAAGCACGTCTTGTTGCCTGT...TCTATCACAGAACAGAGTGGAAAGTCTAGACCACTCTTTCTGTTCCTCTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCTTCATATACACACTTGTGCAGTGAAGGCGTGTGTAAACATGCACCTTGCCTTCTTCTGTGGCTaGTACTTCTTGGTAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SGLHIHTCAVKACVNMHLAFFCG*YFLVEK Trigger: CTTTTCTACCAAGAAGTACCAGCCACAGAAGAAGGC...AAGGTGCATGTTTACACACGCCTTCACTGCACAAGTGTGTATATGAAGACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR CAA 72 bp | ATTTCCCATCATGCCTTCTTCTGTGGCTGGTACTTCTaGGTAGAAAAGTTTGGCTCTGGCATAGAACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISHHAFFCGWYF*VEKFGSGIELH Trigger: ATGCAGTTCTATGCCAGAGCCAAACTTTTCTACCAAGAAGTACCAGCCACAGAAGAAGGCATGATGGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160495.2 |
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| CDS-3UTR TCA 90 bp | CTGATAGAGGAACAGAAAGAGTGGTCTAGACTTTCCACTCTGTTCTGTGATAGATTGCGAATGGCTTTGTaGAGGATAAAGGACATGCTA | + |
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Preference number: 4 (lower is better) Translates to: LIEEQKEWSRLSTLFCDRLRMAL*RIKDML Trigger: TAGCATGTCCTTTATCCTTCACAAAGCCATTCGCAA...TCTATCACAGAACAGAGTGGAAAGTCTAGACCACTCTTTCTGTTCCTCTATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCTTAGTTAGGTCAAGATGTTTCTTCAAGAGACACTGTAACAGCAAAGAGCCAATTCAACACTGCTaGAAACAGGCAACAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: PFLVRSRCFFKRHCNSKEPIQHC*KQATRR Trigger: ACGTCTTGTTGCCTGTTTTCAGCAGTGTTGAATTGG...CTCTTTGCTGTTACAGTGTCTCTTGAAGAAACATCTTGACCTAACTAAGAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCTTAGTTAGGTCAAGATGTTTCTTCAAGAGACACTGTAACAGCAAAGAGCCCACTGAATCCAGATaGCATCATATCTCCCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PFLVRSRCFFKRHCNSKEPTESR*HHISLS Trigger: ACTTAGGGAGATATGATGTCATCTGGATTCAGTGGG...CTCTTTGCTGTTACAGTGTCTCTTGAAGAAACATCTTGACCTAACTAAGAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | CTGATAGAGGAACAGAAAGAGTGGTCTAGACTTTCCACTCTGTTCTGTGATAGACTTGGTAGAAAAGTTTaGCTCTGGCATAGAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LIEEQKEWSRLSTLFCDRLGRKV*LWHRTA Trigger: TGCAGTTCTATGCCAGAGCCAAACTTTTCTACCAAG...TCTATCACAGAACAGAGTGGAAAGTCTAGACCACTCTTTCTGTTCCTCTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| 3UTR CAA 72 bp | AAGCATCATTTCTTTCTCAGGTCTTCATATACACACTaGTGCAGTGAAGGCGTGTGTAAACATGCACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: KHHFFLRSSYTH*CSEGVCKHAPY Trigger: ATAAGGTGCATGTTTACACACGCCTTCACTGCACAAGTGTGTATATGAAGACCTGAGAAAGAAATGATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CCA 90 bp | ATTTGTAAGCATCATTTCTTTCTCAGGTCTTCATATACACACTTGTGCAGTGAAAATTCACGAGAGGCTTaGATATCTGGGTTGGATAAT | + |
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Preference number: 4 (lower is better) Translates to: ICKHHFFLRSSYTHLCSENSREA*ISGLDN Trigger: ATTATCCAACCCAGATATCCAAGCCTCTCGTGAATT...TTCACTGCACAAGTGTGTATATGAAGACCTGAGAAAGAAATGATGCTTACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS GCA 90 bp | ATCATGTCCACCAATTCAACACTGCTGAAAACAGGCAACAAGACGTaGTTGCTGACCCTTCCTATTCCAGAACCGCAGTCCAAGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: IMSTNSTLLKTGNKT*LLTLPIPEPQSKAQ Trigger: CTGCGCCTTGGACTGCGGTTCTGGAATAGGAAGGGTCAGCAAGCACGTCTTGTTGCCTGTTTTCAGCAGTGTTGAATTGGTGGACATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CAA 90 bp | TCAGGTCTTCATATACACACTTGTGCAGTGAAGGCGTGTGTAAACATGCACCTTTGTGGCTGGTACTTCTaGGTAGAAAAGTTTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGLHIHTCAVKACVNMHLCGWYF*VEKFGS Trigger: AGAGCCAAACTTTTCTACCAAGAAGTACCAGCCACA...AAGGTGCATGTTTACACACGCCTTCACTGCACAAGTGTGTATATGAAGACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS-3UTR CAA 90 bp | CCCTTCTTAGTTAGGTCAAGATGTTTCTTCAAGAGACACTGTAACAGCAAAGAGCCCTCCCGTGCCACATaGTCCTTCAGTATGATAACA | + |
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Preference number: 5 (lower is better) Translates to: PFLVRSRCFFKRHCNSKEPSRAT*SFSMIT Trigger: TGTTATCATACTGAAGGACAATGTGGCACGGGAGGG...CTCTTTGCTGTTACAGTGTCTCTTGAAGAAACATCTTGACCTAACTAAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS CAA 90 bp | ATGTCCACCAATTCAACACTGCTGAAAACAGGCAACAAGACGTGCTaGCTGACCCTTCCTATTCCAGAACCGCAGTCCAAGGCGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: MSTNSTLLKTGNKTC*LTLPIPEPQSKAQP Trigger: TGGCTGCGCCTTGGACTGCGGTTCTGGAATAGGAAGGGTCAGCAAGCACGTCTTGTTGCCTGTTTTCAGCAGTGTTGAATTGGTGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS GCA 72 bp | ACCAATTCAACACTGCTGAAAACAGGCAACAAGACGTaGTTGCTGACCCTTCCTATTCCAGAACCGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TNSTLLKTGNKT*LLTLPIPEPQS Trigger: GGACTGCGGTTCTGGAATAGGAAGGGTCAGCAAGCACGTCTTGTTGCCTGTTTTCAGCAGTGTTGAATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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| CDS CCA 72 bp | CCCCCAACAAATTTCCTAAGAAATTCACGAGAGGCTTaGATATCTGGGTTGGATAATTCAATAAAATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPTNFLRNSREA*ISGLDNSIKFP Trigger: GGGAAATTTTATTGAATTATCCAACCCAGATATCCAAGCCTCTCGTGAATTTCTTAGGAAATTTGTTGGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159679.8 |
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