Pregenerated sensors for METTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006732Ensembl transcript IDs: ENSMUST00000006915.14, ENSMUST00000120542.8, ENSMUST00000139486.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACACACATGGGTACGTGGGCACACACCCTGATCATCCCCAGGACTaGAAAGTAAACACAAGTGAAGGCAACCTGAGCCACACACAGCCT | + |
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Preference number: 1 (lower is better) Translates to: HTHGYVGTHPDHPQD*KVNTSEGNLSHTQP Trigger: AGGCTGTGTGTGGCTCAGGTTGCCTTCACTTGTGTTTACTTTGCAGTCCTGGGGATGATCAGGGTGTGTGCCCACGTACCCATGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR GCA 90 bp | TTCAGAGACTTCCACAGAGATAGCAGCAATAGAGGCAGCAGAGACTaGCTGGGTCAGACTGTAAGCAGGGAGAAGTTGGGAGGAGGTATT | + |
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Preference number: 1 (lower is better) Translates to: FRDFHRDSSNRGSRD*LGQTVSREKLGGGI Trigger: AATACCTCCTCCCAACTTCTCCCTGCTTACAGTCTGACCCAGGCAGTCTCTGCTGCCTCTATTGCTGCTATCTCTGTGGAAGTCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR TCA 90 bp | CCTTCCCTCCCTCTCCTCATGAGACACAACTATGCCAGTCAGGTCTaGAATTCTGGAATCAAGTTCAACATGGTAGAGACAAGGAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PSLPLLMRHNYASQV*NSGIKFNMVETRKA Trigger: AGCCTTCCTTGTCTCTACCATGTTGAACTTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGGGAGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CCA 90 bp | CCCTCTCCTCATGAGACACAACTATGCCAGTCAGGTCTGAAATTCTaGAATCAAGTTCAACATGGTAGAGACAAGGAAGGCTCTCTACCC | + |
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Preference number: 1 (lower is better) Translates to: PSPHETQLCQSGLKF*NQVQHGRDKEGSLP Trigger: GGGTAGAGAGCCTTCCTTGTCTCTACCATGTTGAACTTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCGACTGCCTCTGCCTCTaGCTCTGCCTCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LCSPGWPQTQKSDCLCLCDCLCL*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAGAGGCAGAGGCAGTC...GCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | CACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCAAATCCGACTGCCTCTaGCTCTGCCTCTGCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: HHRLLPNQLLGEVTAPQSKSDCL*LCLCLP Trigger: CGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTT...GGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCCTCTGCCTCTGCCTCTaGCTCCCGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: CVALAGLKLRNPTASASALCLCL*LPSAGI Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGAGGCAGAG...GGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR CAA 90 bp | GAGCGATGGGTAAAGAACACCACAGACTGCTCCCCAACCAACTTCTaGGAGAGGTCACGGCCCCACAGTCCCACCAGTCTGGGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ERWVKNTTDCSPTNF*ERSRPHSPTSLGRP Trigger: AGGCCTTCCCAGACTGGTGGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTCTTTACCCATCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | CACACACATGGGTACGTGGGCACACACCCTGATCATCCCCAGGACTGCAAAGTAGACTGCCTCTGCCTCTaGCTCTGCCTCCCGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HTHGYVGTHPDHPQDCKVDCLCL*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAGAGGCAGAGGCAGTC...TACTTTGCAGTCCTGGGGATGATCAGGGTGTGTGCCCACGTACCCATGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR GCA 90 bp | AGAACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAAAATCCGACTGCCTCTaGCTCTGCCTCTGCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: RTPQTAPQPTSWRGHGPTKSDCL*LCLCLP Trigger: CGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTT...TGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCAAATCCGACTGCCTCTaGCTCTGCCTCTGCCTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLKSDCL*LCLCLP Trigger: CGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTT...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTGTGTAGCCCTGGCTaGCCTCAAACTCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LCSPGWPQTQKSDCLCLCLCSPG*PQTQKS Trigger: GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG...GCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCCTGTGTAGCCCTGGCTaGCCTCAAACTCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: CSPGWPQTQKSDCLCLCLLCSPG*PQTQKS Trigger: GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG...GAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCCACCAGGGGTGTTCTTCAAAGTaGGTGCACATCCACTCATGC | + |
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Preference number: 2 (lower is better) Translates to: RLLPNQLLGEVTAPQSHQGCSSK*VHIHSC Trigger: GCATGAGTGGATGTGCACCCACTTTGAAGAACACCC...CTGGTGGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGACTCTGCCTCTGCCTCTaGCTCCCGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: WFFETGFLCVALAGLKLRLCLCL*LPSAGI Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGAGGCAGAG...TCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCACTCAGAAATCCGACTaGCTCTGCCTCTGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLTQKSD*LCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGT...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCACAGTGGGCATCACATaGTTCACCCGAGCTAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TPQTAPQPTSWRGHGPTVTVGIT*FTRARE Trigger: TTCTCTAGCTCGGGTGAAGCATGTGATGCCCACTGT...GACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR GCA 90 bp | TGCTCAATGAGAACAGAATATCCACAGCCCTCCAAATATCCCCTCTGGCCCACAGTGCACATCCACTCATaGAGCTCCGGCACGTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: CSMRTEYPQPSKYPLWPTVHIHS*SSGTSV Trigger: CACCGACGTGCCGGAGCTGCATGAGTGGATGTGCAC...TGTGGGCCAGAGGGGATATTTGGAGGGCTGTGGATATTCTGTTCTCATTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139486.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTTCGGAAGACGGCTaGGAAATTCTTTCCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: CVALAGLKLRNPTASASASSEDG*EILSPI Trigger: AATGGGGGAAAGAATTTCCCAGCCGTCTTCCGAAGA...GGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCACTCAGAAATCCGACTaGCTCTGCCTCTGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FRDRVSLCSPGWPQTQKSTQKSD*LCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGT...GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCACACAGCCTAGACAGTaGTACATCACATGTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TPQTAPQPTSWRGHGPTVTQPRQ*YITCFS Trigger: GGAGAAACATGTGATGTACCACTGTCTAGGCTGTGT...GACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CAA 90 bp | AGAGGCAGCAGAGACTGCCTGGGTCAGACTGTAAGCAGGGAGAAGTaGGGAGGAGGTATTTCATACATACCCCAGCCCTTCTTGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: RGSRDCLGQTVSREK*GGGISYIPQPFLGN Trigger: ATTTCCCAAGAAGGGCTGGGGTATGTATGAAATACCTCCTCCCAACTTCTCCCTGCTTACAGTCTGACCCAGGCAGTCTCTGCTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR GCA 90 bp | ATCACATGTTTCTCCACACACACAACTAAACAGTGGGCATCACATGCTTCACCCCTCTGCCTCTGCCTCTaGCTCCCGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: ITCFSTHTTKQWASHASPLCLCL*LPSAGI Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGAGGCAGAG...GGGTGAAGCATGTGATGCCCACTGTTTAGTTGTGTGTGTGGAGAAACATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR GCA 90 bp | AACCTGAGCCACACACAGCCTAGACAGTGGTACATCACATGTTTCTCCACACACACTCAGAAATCCGACTaGCTCTGCCTCTGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: NLSHTQPRQWYITCFSTHTQKSD*LCLCLC Trigger: GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGT...GTGTGTGGAGAAACATGTGATGTACCACTGTCTAGGCTGTGTGTGGCTCAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTCAATGAGAACAGAATATCCACAGCCCTCCAAATATCCCCTCTGGCCCTACCCCAGCCCTTCTTaGGAAATAGTGACATTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GCSMRTEYPQPSKYPLWPYPSPS*EIVTLA Trigger: TGCCAATGTCACTATTTCCCAAGAAGGGCTGGGGTA...GGGCCAGAGGGGATATTTGGAGGGCTGTGGATATTCTGTTCTCATTGAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCCTAGATGTTCCACAATaGGGTCTTCACTTAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLCSPGWPQTQKSDCLCLLDVPQ*GLHLAL Trigger: AAGAGCTAAGTGAAGACCCCATTGTGGAACATCTAG...GAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139486.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAACAGAATATCCACAGCCCTCCAAATATCCCCTCTGGCCCACAGTCCTTTGTCAGCCAGCTTCATCTaGTTTCTTCAGACAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ENRISTALQISPLAHSPLSASFI*FLQTVE Trigger: CTCCACTGTCTGAAGAAATCAGATGAAGCTGGCTGA...CAAAGGACTGTGGGCCAGAGGGGATATTTGGAGGGCTGTGGATATTCTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCAGGGAGAAGTTGGGAGGAGGTATTTCATACATACCCCAGCCCTTCTTGTCAGCCAGCTTCATCTaGTTTCTTCAGACAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VSREKLGGGISYIPQPFLSASFI*FLQTVE Trigger: CTCCACTGTCTGAAGAAATCAGATGAAGCTGGCTGA...CAAGAAGGGCTGGGGTATGTATGAAATACCTCCTCCCAACTTCTCCCTGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CAA 90 bp | GAGGTATTTCATACATACCCCAGCCCTTCTTGGGAAATAGTGACATaGGCACATGGGTATACACATGGGTACGTGGGCACACACACACAT | + |
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Preference number: 2 (lower is better) Translates to: EVFHTYPSPSWEIVT*AHGYTHGYVGTHTH Trigger: ATGTGTGTGTGTGCCCACGTACCCATGTGTATACCCATGTGCCAATGTCACTATTTCCCAAGAAGGGCTGGGGTATGTATGAAATACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR-3UTR CAA 90 bp | AGAACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACATCCCCAACCAACTTCTaGGAGAGGTCACGGCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RTPQTAPQPTSWRGHGPTSPTNF*ERSRPH Trigger: GTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGA...TGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR-3UTR CAA 90 bp | GAACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGCTGGCCCACAGTCCTTaGACCTTCTCAGCCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: EHHRLLPNQLLGEVTAPQLAHSP*TFSASF Trigger: GAAGCTGGCTGAGAAGGTCAAAGGACTGTGGGCCAG...CTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR GCA 72 bp | TGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: WPQTQKSDCLCL*LCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CAA 90 bp | ACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCCTCTTTCCTTCCTCAGTaGAACTGCCTAGATGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: TTDCSPTNFLERSRPHSPSFLPQ*NCLDVP Trigger: TGGAACATCTAGGCAGTTCAACTGAGGAAGGAAAGA...GGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139486.2 |
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| 3UTR CCA 72 bp | GTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTaGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VFRDRVSLCSPG*PQTQKSDCLCL Trigger: GAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTTTCCTTCCTCAGTaGAACTGCCTAGATGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: CVALAGLKLRNPTASASASFLPQ*NCLDVP Trigger: TGGAACATCTAGGCAGTTCAACTGAGGAAGGAAAGA...GGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR TCA 72 bp | CAGCCCTCCAAATATCCCCTCTGGCCCACAGTCCTTTaGCCTTCTCAGCCAGCTTCATCTGATTTCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QPSKYPLWPTVL*PSQPASSDFFR Trigger: TCTGAAGAAATCAGATGAAGCTGGCTGAGAAGGTCAAAGGACTGTGGGCCAGAGGGGATATTTGGAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR CCA 72 bp | TTGGGAAATAGTGACATTGGCACATGGGTATACACATaGGTACGTGGGCACACACACACATGGGTACGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LGNSDIGTWVYT*VRGHTHTWVRG Trigger: CCCACGTACCCATGTGTGTGTGTGCCCACGTACCCATGTGTATACCCATGTGCCAATGTCACTATTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR GCA 72 bp | TCCGCCTTCCCTCCCTCTCCTCATGAGACACAACTATaGCAGTCAGGTCTGAAATTCTGGAATCAAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SAFPPSPHETQL*QSGLKFWNQVQ Trigger: TTGAACTTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGGGAGGGAAGGCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR GCA 72 bp | CAACATGGTAGAGACAAGGAAGGCTCTCTACCCTCTTaGTCTTCAGAGACTTCCACAGAGATAGCAGCAATA | + |
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Preference number: 3 (lower is better) Translates to: QHGRDKEGSLPS*SSETSTEIAAI Trigger: TATTGCTGCTATCTCTGTGGAAGTCTCTGAAGAGCAAGAGGGTAGAGAGCCTTCCTTGTCTCTACCATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CCA 72 bp | AGTGAAGGCAACCTGAGCCACACACAGCCTAGACAGTaGTACATCACATGTTTCTCCACACACACAACTAAA | + |
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Preference number: 3 (lower is better) Translates to: SEGNLSHTQPRQ*YITCFSTHTTK Trigger: TTTAGTTGTGTGTGTGGAGAAACATGTGATGTACCACTGTCTAGGCTGTGTGTGGCTCAGGTTGCCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CCA 72 bp | CCTTCTCAGCCAGCTTCATCTGATTTCTTCAGACAGTaGAGGAACAAAAAGGCAGTAAGAGCGATGGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: PSQPASSDFFRQ*RNKKAVRAMGK Trigger: TTTACCCATCGCTCTTACTGCCTTTTTGTTCCTCCACTGTCTGAAGAAATCAGATGAAGCTGGCTGAGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| 3UTR TCA 72 bp | CCTCTCCTCATGAGACACAACTATGCCAGTCAGGTCTaGAATTCTGGAATCAAGTTCAACATGGTAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: PLLMRHNYASQV*NSGIKFNMVET Trigger: TGTCTCTACCATGTTGAACTTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CCA 72 bp | CATGAGACACAACTATGCCAGTCAGGTCTGAAATTCTaGAATCAAGTTCAACATGGTAGAGACAAGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: HETQLCQSGLKF*NQVQHGRDKEG Trigger: GCCTTCCTTGTCTCTACCATGTTGAACTTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR GCA 90 bp | AGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTGCGTGCACATCCACTCATaGAGCTCCGGCACGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPGWPQTQKSDCLCLCLCVHIHS*SSGTSV Trigger: CACCGACGTGCCGGAGCTGCATGAGTGGATGTGCAC...GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCAGACAGGCGATGTTCTaGAATCCGCCCCCGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LCSPGWPQTQKSDCLCLCRQAMF*NPPPGA Trigger: AGCTCCCGGGGGCGGATTCCAGAACATCGCCTGTCT...GCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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| CDS-3UTR CCA 90 bp | ACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCCGGGTGTTCTTCAAAGTaGGTGCACATCCACTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TTDCSPTNFLERSRPHSPGCSSK*VHIHSC Trigger: GCATGAGTGGATGTGCACCCACTTTGAAGAACACCC...GGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| 3UTR CAA 72 bp | GTAAAGAACACCACAGACTGCTCCCCAACCAACTTCTaGGAGAGGTCACGGCCCCACAGTCCCACCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKNTTDCSPTNF*ERSRPHSPTSL Trigger: CAGACTGGTGGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTCTTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| CDS-3UTR GCA 90 bp | AGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTGCACTTGGGCCCCAGAGTaGTTTTCTTTCTCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGWPQTQKSDCLCLCLCTWAPE*FSFSSF Trigger: AAAGGATGAGAAAGAAAAGCACTCTGGGGCCCAAGT...GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS-3UTR GCA 90 bp | AACCTGAGCCACACACAGCCTAGACAGTGGTACATCACATGTTTCTCCACACACGTGCACATCCACTCATaGAGCTCCGGCACGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSHTQPRQWYITCFSTHVHIHS*SSGTSV Trigger: CACCGACGTGCCGGAGCTGCATGAGTGGATGTGCAC...GTGTGTGGAGAAACATGTGATGTACCACTGTCTAGGCTGTGTGTGGCTCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CCA 90 bp | CATGTTTCTCCACACACACAACTAAACAGTGGGCATCACATGCTTCACCCGAGCAGACAGGCGATGTTCTaGAATCCGCCCCCGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HVSPHTQLNSGHHMLHPSRQAMF*NPPPGA Trigger: AGCTCCCGGGGGCGGATTCCAGAACATCGCCTGTCT...GCTCGGGTGAAGCATGTGATGCCCACTGTTTAGTTGTGTGTGTGGAGAAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CCA 90 bp | AGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTGCAACATCTTTGCCAGCTaGCCCTTGCGGAAGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SPGWPQTQKSDCLCLCLCNIFAS*PLRKKL Trigger: TAATTTCTTCCGCAAGGGCCAGCTGGCAAAGATGTT...GCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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| CDS-3UTR CCA 90 bp | GAACACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCTTCGGAAGACGGCTaGGAAATTCTTTCCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EHHRLLPNQLLGEVTAPQSSEDG*EILSPI Trigger: AATGGGGGAAAGAATTTCCCAGCCGTCTTCCGAAGA...CTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGTGTACACCAGGCCCTaGATGAGCGACAGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRDRVSLCSPGWPQTQKSVYTRP*MSDSVG Trigger: TCCAACACTGTCGCTCATCCAGGGCCTGGTGTACAC...GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120542.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCCTCATGGCTCTTATTTTaGATAAGCGGAGCAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTDCSPTNFLERSRPHSPSWLLF*ISGAKN Trigger: GTTCTTTGCTCCGCTTATTCAAAATAAGAGCCATGA...GGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| CDS-3UTR TCA 90 bp | AGACTGCTCCCCAACCAACTTCTTGGAGAGGTCACGGCCCCACAGTCCCACCAGTCATGGCTCTTATTTTaGATAAGCGGAGCAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPNQLLGEVTAPQSHQSWLLF*ISGAKN Trigger: GTTCTTTGCTCCGCTTATTCAAAATAAGAGCCATGA...CTGGTGGGACTGTGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCACTTGGGCCCCAGAGTaGTTTTCTTTCTCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLTWAPE*FSFSSF Trigger: AAAGGATGAGAAAGAAAAGCACTCTGGGGCCCAAGT...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| 3UTR CAA 72 bp | CATACATACCCCAGCCCTTCTTGGGAAATAGTGACATaGGCACATGGGTATACACATGGGTACGTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HTYPSPSWEIVT*AHGYTHGYVGT Trigger: TGTGCCCACGTACCCATGTGTATACCCATGTGCCAATGTCACTATTTCCCAAGAAGGGCTGGGGTATGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCAACATCTTTGCCAGCTaGCCCTTGCGGAAGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FRDRVSLCSPGWPQTQKSNIFAS*PLRKKL Trigger: TAATTTCTTCCGCAAGGGCCAGCTGGCAAAGATGTT...GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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| CDS-3UTR TCA 90 bp | TTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCTCATGGCTCTTATTTTaGATAAGCGGAGCAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRDRVSLCSPGWPQTQKSSWLLF*ISGAKN Trigger: GTTCTTTGCTCCGCTTATTCAAAATAAGAGCCATGA...GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGCCAGCTTCATCTGATTTCTTCAGACAGTGGAGGAACAAAAAGGCAGTAACTTGGGCCCCAGAGTaGTTTTCTTTCTCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQPASSDFFRQWRNKKAVTWAPE*FSFSSF Trigger: AAAGGATGAGAAAGAAAAGCACTCTGGGGCCCAAGT...TACTGCCTTTTTGTTCCTCCACTGTCTGAAGAAATCAGATGAAGCTGGCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| CDS-3UTR CCA 90 bp | CCCTCTCCTCATGAGACACAACTATGCCAGTCAGGTCTGAAATTCTGGAATCAACTAGATGTTCCACAATaGGGTCTTCACTTAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHETQLCQSGLKFWNQLDVPQ*GLHLAL Trigger: AAGAGCTAAGTGAAGACCCCATTGTGGAACATCTAG...TTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CAA 90 bp | TGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCTCTGGTCTGCCATGGGGTaGGAGTGGGCGCGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPGWPQTQKSDCLCLCLWSAMG*EWARCR Trigger: CCGGCAGCGCGCCCACTCCAACCCCATGGCAGACCA...GAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS CCA 90 bp | CACTCATGCAGCTCCGGCACGTCGGTGACGGTGTACACCAGGCCCTaGATGAGCGACAGTGTTGGAGACAGGGCCCGACTCTCAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HSCSSGTSVTVYTRP*MSDSVGDRARLSAR Trigger: ACGTGCTGAGAGTCGGGCCCTGTCTCCAACACTGTCGCTCATCCAGGGCCTGGTGTACACCGTCACCGACGTGCCGGAGCTGCATGAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120542.8 |
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| CDS-3UTR CAA 90 bp | GTGCTCAATGAGAACAGAATATCCACAGCCCTCCAAATATCCCCTCTGGCCCACTGGTCTGCCATGGGGTaGGAGTGGGCGCGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLNENRISTALQISPLAHWSAMG*EWARCR Trigger: CCGGCAGCGCGCCCACTCCAACCCCATGGCAGACCA...GTGGGCCAGAGGGGATATTTGGAGGGCTGTGGATATTCTGTTCTCATTGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000139486.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCGTCTGCAAACTCCACTaGGGCCCCAGAGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCSPGWPQTQKSDCLCLCVCKLH*GPRVLF Trigger: GAAAAGCACTCTGGGGCCCAAGTGGAGTTTGCAGAC...GCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTCCTCATGAGACACAACTATGCCAGTCAGGTCTGAAATTCTGGAATCAATGGTCTGCCATGGGGTaGGAGTGGGCGCGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPHETQLCQSGLKFWNQWSAMG*EWARCR Trigger: CCGGCAGCGCGCCCACTCCAACCCCATGGCAGACCA...TTGATTCCAGAATTTCAGACCTGACTGGCATAGTTGTGTCTCATGAGGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CAA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCGTCTGCAAACTCCACTaGGGCCCCAGAGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLVCKLH*GPRVLF Trigger: GAAAAGCACTCTGGGGCCCAAGTGGAGTTTGCAGAC...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTTTGCCAGCTGGCCCTaGCGGAAGAAATTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLFASWP*RKKLGR Trigger: CCTTCCTAATTTCTTCCGCAAGGGCCAGCTGGCAAA...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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| CDS-3UTR CAA 90 bp | TGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTGCCTCTGCCAGAGGAAGAACATCTTaGCCAGCTAACAAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CVALAGLKLRNPTASASARGRTS*PANKPP Trigger: TGGTGGCTTGTTAGCTGGCAAAGATGTTCTTCCTCT...GGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139486.2 |
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| CDS-3UTR CAA 90 bp | GTAAGCAGGGAGAAGTTGGGAGGAGGTATTTCATACATACCCCAGCCCTTCTTGGTCTGCAAACTCCACTaGGGCCCCAGAGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSREKLGGGISYIPQPFLVCKLH*GPRVLF Trigger: GAAAAGCACTCTGGGGCCCAAGTGGAGTTTGCAGAC...CAAGAAGGGCTGGGGTATGTATGAAATACCTCCTCCCAACTTCTCCCTGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CAA 90 bp | CAGCCTAGACAGTGGTACATCACATGTTTCTCCACACACACAACTAAACAGTGGTTTGCCAGCTGGCCCTaGCGGAAGAAATTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPRQWYITCFSTHTTKQWFASWP*RKKLGR Trigger: CCTTCCTAATTTCTTCCGCAAGGGCCAGCTGGCAAA...CCACTGTTTAGTTGTGTGTGTGGAGAAACATGTGATGTACCACTGTCTAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CAA 90 bp | TTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCTCTTTCCTTCCTCAGTaGAACTGCCTAGATGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRDRVSLCSPGWPQTQKSSFLPQ*NCLDVP Trigger: TGGAACATCTAGGCAGTTCAACTGAGGAAGGAAAGA...GGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS-3UTR CAA 90 bp | AGGGTTTCTCTGTGTAGCCCTGGCTGGCCTCAAACTCAGAAATCCGACTGCCTCTTTCTTTCTCATCCTTaGGATCATCATGGCTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSLCSPGWPQTQKSDCLFLSHP*DHHGSY Trigger: ATAAGAGCCATGATGATCCAAAGGATGAGAAAGAAA...GAGGCAGTCGGATTTCTGAGTTTGAGGCCAGCCAGGGCTACACAGAGAAACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 ENSMUST00000139486.2 |
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| CDS-3UTR CAA 90 bp | AACCTGAGCCACACACAGCCTAGACAGTGGTACATCACATGTTTCTCCACACACTTTCTTTCTCATCCTTaGGATCATCATGGCTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NLSHTQPRQWYITCFSTHFLSHP*DHHGSY Trigger: ATAAGAGCCATGATGATCCAAAGGATGAGAAAGAAA...GTGTGTGGAGAAACATGTGATGTACCACTGTCTAGGCTGTGTGTGGCTCAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006915.14 |
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| CDS CCA 72 bp | TGTTTCATGGCGTTACTTCGGAGACAGGCGATGTTCTaGAATCCGCCCCCGGGAGCTGCACGGAGGGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: CFMALLRRQAMF*NPPPGAARRAR Trigger: TCGGGCCCTCCGTGCAGCTCCCGGGGGCGGATTCCAGAACATCGCCTGTCTCCGAAGTAACGCCATGAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006915.14 ENSMUST00000120542.8 |
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