Pregenerated sensors for METRNL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039208Ensembl transcript IDs: ENSMUST00000036742.14, ENSMUST00000106089.8, ENSMUST00000125580.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTaGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: SLHFTAVPMGQGILG*DLRGQSSMYLPSSS Trigger: GCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTACCAGGCTGGGCCCATaGCACCAGTCTGCAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: GILGWDLRGQSSMYLPSSTRLGP*HQSAIS Trigger: AGAGATTGCAGACTGGTGGCATGGGCCCAGCCTGGT...AGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| 3UTR CCA 72 bp | AGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTaGGCCCATGCCACCAGTCTGCAATCTCTATCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RAACTFPVLAPG*AHATSLQSLSG Trigger: TCCTGATAGAGATTGCAGACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| 3UTR CCA 72 bp | TTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTaGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FTAVPMGQGILG*DLRGQSSMYLP Trigger: GGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTAGGTCGCTGGAGTACTaGGCGCTCGCGCCGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RAACTFPVLAPGWAHATSRSLEY*ALAPPS Trigger: GCTGGGCGGCGCGAGCGCTCAGTACTCCAGCGACCT...ACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS-3UTR GCA 90 bp | GGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCCACTCCACAGAGCCTaGGGAGCAGCGCAGGTACAC | + |
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Preference number: 4 (lower is better) Translates to: GWDLRGQSSMYLPSSSTRPLHRA*GAAQVH Trigger: GTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTGG...CCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS-3UTR GCA 90 bp | CTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCGGGGCAGACAGCACGTaGAGGTCCAGTCCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGWDLRGQSSMYLPSSSTGADST*RSSPLC Trigger: GCAGAGGGGACTGGACCTGCACGTGCTGTCTGCCCC...GGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGCTGTGGTCCTTCTGCTaGTGTCCTGTTGGGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSSMYLPSSSTRLGPCHQLWSFC*CPVGVS Trigger: CGACACCCCAACAGGACATCAGCAGAAGGACCACAG...CTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | GCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCCTGTGGTCCTTCTGCTaGTGTCCTGTTGGGGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: AVPMGQGILGWDLRGQSSLWSFC*CPVGVS Trigger: CGACACCCCAACAGGACATCAGCAGAAGGACCACAG...GCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | GGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCAGGTCCAGTCCCCTCTaGCCACTCATCAGCTCATAC | + |
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Preference number: 4 (lower is better) Translates to: GVRAACTFPVLAPGWAHARSSPL*PLISSY Trigger: GTATGAGCTGATGAGTGGGCAGAGGGGACTGGACCT...GGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | GGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCTGAAGCACTGCACTTaGCCAGGCTCACCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GQSSMYLPSSSTRLGPCHLKHCT*PGSPLM Trigger: CATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAG...GTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTCCTCAGGAGCTGGCTaGAAGACCCTGCTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPMGQGILGWDLRGQSSMSSGAG*KTLLFC Trigger: GCAGAAGAGCAGGGTCTTCCAGCCAGCTCCTGAGGA...CATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | TCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTATCCAGGCTGAAGCACTaGACTTGGCCAGGCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: SNGSGHPWLGPKGSEQHVSRLKH*TWPGSP Trigger: AGGTGAGCCTGGCCAAGTGCAGTGCTTCAGCCTGGA...TACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | GCGACTGAGCCCACAAAACATGGCTCATCTGAAGGACAACAGTACTGTGTCACCGGGGCAGACAGCACGTaGAGGTCCAGTCCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ATEPTKHGSSEGQQYCVTGADST*RSSPLC Trigger: GCAGAGGGGACTGGACCTGCACGTGCTGTCTGCCCC...GGTGACACAGTACTGTTGTCCTTCAGATGAGCCATGTTTTGTGGGCTCAGTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTCTGCAATCTCTATCTCCTCAGGAGCTGGCTaGAAGACCCTGCTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSSTRLGPCHQSAISISSGAG*KTLLFC Trigger: GCAGAAGAGCAGGGTCTTCCAGCCAGCTCCTGAGGA...GATAGAGATTGCAGACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCCCACAAAACATGGCTCATCTGAAGGACAACAGTACTGTGTCACCCTGCCTCCCTGCTCCAGGCTaGAGCACTGCACTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPQNMAHLKDNSTVSPCLPAPG*STALGQ Trigger: CTGGCCAAGTGCAGTGCTTCAGCCTGGAGCAGGGAG...GCAGGGTGACACAGTACTGTTGTCCTTCAGATGAGCCATGTTTTGTGGGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTAGTGCACATGTCCAGTaGAGAGGAATTCCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAACTFPVLAPGWAHATSSAHVQ*RGIPHA Trigger: GGCATGGGGAATTCCTCTTCACTGGACATGTGCACT...ACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | CTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCCTGAAGCACTGCACTTaGCCAGGCTCACCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGWDLRGQSSMYLPSSSTLKHCT*PGSPLM Trigger: CATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAG...GGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | TTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCGGCCAGGCTCACCTCTaGTGTCCCGCACCAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCILQQFQWVRASLAGTGQAHL*CPAPTV Trigger: GACTGTTGGTGCGGGACATCAGAGGTGAGCCTGGCC...GGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCCCACAAAACATGGCTCATCTGAAGGACAACAGTACTGTGTCACCCTGCACTGCAGCAGTGTTGTaGCATGGCCCAGCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPQNMAHLKDNSTVSPCTAAVL*HGPASG Trigger: GCCACTGGCTGGGCCATGTCACAACACTGCTGCAGT...GCAGGGTGACACAGTACTGTTGTCCTTCAGATGAGCCATGTTTTGTGGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | CTGAGCCCACAAAACATGGCTCATCTGAAGGACAACAGTACTGTGTCACCCTGCCAGCGCAGGTACACCTaGTCCACCTCCTTGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPQNMAHLKDNSTVSPCQRRYT*STSLLR Trigger: ACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTG...GCAGGGTGACACAGTACTGTTGTCCTTCAGATGAGCCATGTTTTGTGGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS-3UTR CCA 90 bp | CTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAATGAGCGCCCCAGTTaGGTACATCCACTCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LGWDLRGQSSMYLPSSSTNERPS*VHPLHR Trigger: TCTGTGGAGTGGATGTACCCAACTGGGGCGCTCATT...GGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS-3UTR CCA 90 bp | AGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTCTCATCAGCTCATACTaGAAGCCTGTGGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAACTFPVLAPGWAHATSLISSY*KPVVLL Trigger: CAGAAGGACCACAGGCTTCCAGTATGAGCTGATGAG...ACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | TTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCACTGCAGCAGTGTTGTaGCATGGCCCAGCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LVCILQQFQWVRASLAGTTAAVL*HGPASG Trigger: GCCACTGGCTGGGCCATGTCACAACACTGCTGCAGT...GGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | TCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACACACAGTCAAGTTCTaGGCAGGTGAGAAGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SNGSGHPWLGPKGSEQHVHTVKF*AGEKVL Trigger: CAACACCTTCTCACCTGCCCAGAACTTGACTGTGTG...TACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | ATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTCTGCAATCCACACAGTCAAGTTCTaGGCAGGTGAGAAGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MYLPSSSTRLGPCHQSAIHTVKF*AGEKVL Trigger: CAACACCTTCTCACCTGCCCAGAACTTGACTGTGTG...GATTGCAGACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | AGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCTATCCAGGCTGAAGCACTaGACTTGGCCAGGCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: SLHFTAVPMGQGILGWDLSRLKH*TWPGSP Trigger: AGGTGAGCCTGGCCAAGTGCAGTGCTTCAGCCTGGA...TAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | CTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCTTCCTGTACATCCTTTaGAAGTCACTAAAGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGWDLRGQSSMYLPSSSTFLYIL*KSLKRG Trigger: CCCACGCTTTAGTGACTTTCAAAGGATGTACAGGAA...GGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | GGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACTATGCCCATTTCTTCTaGTTTCCTGTACATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GQSSMYLPSSSTRLGPCHYAHFF*FPVHPL Trigger: CAAAGGATGTACAGGAAAGCAGAAGAAATGGGCATA...GTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR GCA 90 bp | CTTGGCTGGGACCTAAGGGGTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCTATGCCCATTTCTTCTaGTTTCCTGTACATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LGWDLRGQSSMYLPSSSTYAHFF*FPVHPL Trigger: CAAAGGATGTACAGGAAAGCAGAAGAAATGGGCATA...GGTGCTAGAACTGGGAAGGTACATGCTGCTCTGACCCCTTAGGTCCCAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | TATAATAACTTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGCTCCCTGCTCCAGGCTaGAGCACTGCACTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YNNLVCILQQFQWVRASLLPAPG*STALGQ Trigger: CTGGCCAAGTGCAGTGCTTCAGCCTGGAGCAGGGAG...CAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAAGTTATTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | AAATATAATAACTTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCGGCCAGGCTCACCTCTaGTGTCCCGCACCAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: KYNNLVCILQQFQWVRASGQAHL*CPAPTV Trigger: GACTGTTGGTGCGGGACATCAGAGGTGAGCCTGGCC...GGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAAGTTATTATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | AATAACTTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTAGTGCACATGTCCAGTaGAGAGGAATTCCCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: NNLVCILQQFQWVRASLASAHVQ*RGIPHA Trigger: GGCATGGGGAATTCCTCTTCACTGGACATGTGCACT...AGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAAGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR TCA 90 bp | AATAACTTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTTTCCTGTACATCCTTTaGAAGTCACTAAAGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NNLVCILQQFQWVRASLAFLYIL*KSLKRG Trigger: CCCACGCTTTAGTGACTTTCAAAGGATGTACAGGAA...AGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAAGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CCA 90 bp | TATAATAACTTAGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGCTCATCAGCTCATACTaGAAGCCTGTGGTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YNNLVCILQQFQWVRASLLISSY*KPVVLL Trigger: CAGAAGGACCACAGGCTTCCAGTATGAGCTGATGAG...CAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACTAAGTTATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 90 bp | CACCTCCTTGCTGCGTGCCTCTCGGGTGAGCCCACCCGCAAGCTCTaGCACTCGCTGCCGAGGGCTCCGGTCCAGGTCCAGGGAGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: HLLAACLSGEPTRKL*HSLPRAPVQVQGVH Trigger: GTGGACTCCCTGGACCTGGACCGGAGCCCTCGGCAGCGAGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS GCA 90 bp | GCCTGCGGAGCAGCGCAGGTACACCTGCTCCACCTCCTTGCTGCGTaGCTCTCGGGTGAGCCCACCCGCAAGCTCTGCCACTCGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: ACGAAQVHLLHLLAA*LSGEPTRKLCHSLP Trigger: CGGCAGCGAGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS TCA 90 bp | AGCGCAGGTACACCTGCTCCACCTCCTTGCTGCGTGCCTCTCGGGTaGGCCCACCCGCAAGCTCTGCCACTCGCTGCCGAGGGCTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: SAGTPAPPPCCVPLG*AHPQALPLAAEGSG Trigger: ACCGGAGCCCTCGGCAGCGAGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS GCA 90 bp | GGGTACATCCACTCCACAGAGCCTGCGGAGCAGCGCAGGTACACCTaGTCCACCTCCTTGCTGCGTGCCTCTCGGGTGAGCCCACTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GYIHSTEPAEQRRYT*STSLLRASRVSPLP Trigger: GGGGAGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTGGATGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS GCA 90 bp | GGGTACATCCACTCCACAGAGCCTGCGGAGCAGCGCAGGTACACCTaGTCCACCTCCTTGCTGCGTGCCTCTCGGGTGAGCCCACCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GYIHSTEPAEQRRYT*STSLLRASRVSPPA Trigger: TGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTGGATGTACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS CCA 90 bp | CCACTCGCTGCCGAGGGCTCCGGTCCAGGTCCAGGGAGTCCACGCTaGAATCACCCGCAAGACTCACCTCCCCTTCCAGCTGCACAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PLAAEGSGPGPGSPR*NHPQDSPPLPAAQV Trigger: GACCTGTGCAGCTGGAAGGGGAGGTGAGTCTTGCGGGTGATTCCAGCGTGGACTCCCTGGACCTGGACCGGAGCCCTCGGCAGCGAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAAGGGGTCAGAGCAGCACCTGCTCCACCTCCTaGCTGCGTGCCTCTCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: AVPMGQGILGWDLRGQSSTCSTS*LRASRV Trigger: CACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGT...GCTGCTCTGACCCCTTAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS GCA 90 bp | CAAGGCCGACAGGGGGCAGACAGCACGTGCAGGTCCAGTCCCCTCTaGCCACTCATCAGCTCATACTGGAAGCCTGTGGTCCTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGRQGADSTCRSSPL*PLISSYWKPVVLLL Trigger: CAGCAGAAGGACCACAGGCTTCCAGTATGAGCTGATGAGTGGGCAGAGGGGACTGGACCTGCACGTGCTGTCTGCCCCCTGTCGGCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS CCA 90 bp | TCCCCATGCCCTGGTCGTACTCCACACTGCAGCAGTGTTGTGACATaGCCCAGCCAGTGGCCACTGTCCTCAGGAGCTGGCTGGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: SPCPGRTPHCSSVVT*PSQWPLSSGAGWKT Trigger: GGTCTTCCAGCCAGCTCCTGAGGACAGTGGCCACTGGCTGGGCCATGTCACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 90 bp | GTTAACAATGAGCGCCCCAGTTGGGTACATCCACTCCACAGAGCCTaGGGAGCAGCGCAGGTACACCTGCTCCACCTCCTTGCTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VNNERPSWVHPLHRA*GAAQVHLLHLLAAC Trigger: GCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTGGATGTACCCAACTGGGGCGCTCATTGTTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000125580.2 |
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| CDS GCA 90 bp | AGGACCTCAGTGTCACTGCAAGGCCGACAGGGGGCAGACAGCACGTaGAGGTCCAGTCCCCTCTGCCCACTCATCAGCTCATACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RTSVSLQGRQGADST*RSSPLCPLISSYWK Trigger: CTTCCAGTATGAGCTGATGAGTGGGCAGAGGGGACTGGACCTGCACGTGCTGTCTGCCCCCTGTCGGCCTTGCAGTGACACTGAGGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS-3UTR CAA 90 bp | GTCAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCGCTGAAGCACTGCACTaGGCCAGGCTCACCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: VRAACTFPVLAPGWAHATAEALH*ARLTSD Trigger: ATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAGC...GGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 90 bp | GGTGTCGCCTCCACAAATAAGCCTCCCTGCTCCAGGCTGAAGCACTaGACTTGGCCAGGCTCACCTCTGATGTCCCGCACCAACAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GVASTNKPPCSRLKH*TWPGSPLMSRTNSL Trigger: AAGACTGTTGGTGCGGGACATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAGCCTGGAGCAGGGAGGCTTATTTGTGGAGGCGACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS GCA 90 bp | TGTCCAGTGAAGAGGAATTCCCCATGCCCTGGTCGTACTCCACACTaGAGCAGTGTTGTGACATGGCCCAGCCAGTGGCCACTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CPVKRNSPCPGRTPH*SSVVTWPSQWPLSS Trigger: TGAGGACAGTGGCCACTGGCTGGGCCATGTCACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 90 bp | TGTGCCTCCCCAAAGTGCACATGTCCAGTGAAGAGGAATTCCCCATaGCCTGGTCGTACTCCACACTGCAGCAGTGTTGTGACATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CASPKCTCPVKRNSP*PGRTPHCSSVVTWP Trigger: GGGCCATGTCACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACATGTGCACTTTGGGGAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CCA 90 bp | CTCCCCAAAGTGCACATGTCCAGTGAAGAGGAATTCCCCATGCCCTaGTCGTACTCCACACTGCAGCAGTGTTGTGACATGGCCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LPKVHMSSEEEFPMP*SYSTLQQCCDMAQP Trigger: TGGCTGGGCCATGTCACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACATGTGCACTTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGGAGTCCCTGAAAGGCTaGATGCACACAGTCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: QSSMYLPSSSTRLGPCHQESLKG*MHTVKF Trigger: GAACTTGACTGTGTGCATCAAGCCTTTCAGGGACTC...CTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CCA 90 bp | GCTCCAGAGGAGTCCCTGAAAGGCTTGATGCACACAGTCAAGTTCTaGGCAGGTGAGAAGGTGTTGGGCCGTAGGTTAACAATGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: APEESLKGLMHTVKF*AGEKVLGRRLTMSA Trigger: GGCGCTCATTGTTAACCTACGGCCCAACACCTTCTCACCTGCCCAGAACTTGACTGTGTGCATCAAGCCTTTCAGGGACTCCTCTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS CCA 90 bp | ATCAGCTCATACTGGAAGCCTGTGGTCCTTCTGCTGATGTCCTGTTaGGGTGTCGCCTCCACAAATAAGCCTCCCTGCTCCAGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ISSYWKPVVLLLMSC*GVASTNKPPCSRLK Trigger: CTTCAGCCTGGAGCAGGGAGGCTTATTTGTGGAGGCGACACCCCAACAGGACATCAGCAGAAGGACCACAGGCTTCCAGTATGAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS-3UTR CAA 90 bp | AGCATGTACCTTCCCAGTTCTAGCACCAGGCTGGGCCCATGCCACCAGTCTGCAGAGTCCCTGAAAGGCTaGATGCACACAGTCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SMYLPSSSTRLGPCHQSAESLKG*MHTVKF Trigger: GAACTTGACTGTGTGCATCAAGCCTTTCAGGGACTC...TGCAGACTGGTGGCATGGGCCCAGCCTGGTGCTAGAACTGGGAAGGTACATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS-3UTR CAA 90 bp | AGTTTGCATTTTACAGCAGTTCCAATGGGTCAGGGCATCCTTGGCTGGGACCTAGCTGAAGCACTGCACTaGGCCAGGCTCACCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: SLHFTAVPMGQGILGWDLAEALH*ARLTSD Trigger: ATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAGC...TAGGTCCCAGCCAAGGATGCCCTGACCCATTGGAACTGCTGTAAAATGCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CCA 90 bp | CATTTCTTCTGCTTTCCTGTACATCCTTTGAAAGTCACTAAAGCGTaGGGCACATCCAAGTTGTGCCTCCCCAAAGTGCACATGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: HFFCFPVHPLKVTKA*GTSKLCLPKVHMSS Trigger: ACTGGACATGTGCACTTTGGGGAGGCACAACTTGGATGTGCCCCACGCTTTAGTGACTTTCAAAGGATGTACAGGAAAGCAGAAGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 72 bp | TCTCGGGTGAGCCCACCCGCAAGCTCTGCCACTCGCTaGCGAGGGCTCCGGTCCAGGTCCAGGGAGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: SRVSPPASSATR*RGLRSRSREST Trigger: CGTGGACTCCCTGGACCTGGACCGGAGCCCTCGGCAGCGAGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS CAA 72 bp | CCTGCGGAGCAGCGCAGGTACACCTGCTCCACCTCCTaGCTGCGTGCCTCTCGGGTGAGCCCACCCGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PAEQRRYTCSTS*LRASRVSPPAS Trigger: GCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS TCA 72 bp | ACACCTGCTCCACCTCCTTGCTGCGTGCCTCTCGGGTaGGCCCACCCGCAAGCTCTGCCACTCGCTGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: TPAPPPCCVPLG*AHPQALPLAAE Trigger: CTCGGCAGCGAGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS GCA 72 bp | GCAGCGCAGGTACACCTGCTCCACCTCCTTGCTGCGTaGCTCTCGGGTGAGCCCACCCGCAAGCTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: AAQVHLLHLLAA*LSGEPTRKLCH Trigger: GTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS CAA 72 bp | CCTGCGGAGCAGCGCAGGTACACCTGCTCCACCTCCTaGCTGCGTGCCTCTCGGGTGAGCCCACTCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PAEQRRYTCSTS*LRASRVSPLPF Trigger: GAAGGGGAGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS CAA 90 bp | TCCACAGAGCCTGCGGAGCAGCGCAGGTACACCTGCTCCACCTCCTaGCTGCGTGCCTCTCGGGTGAGCCCACTCCCCTTCCAGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: STEPAEQRRYTCSTS*LRASRVSPLPFQLH Trigger: GTGCAGCTGGAAGGGGAGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036742.14 |
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| CDS CAA 90 bp | TCCACAGAGCCTGCGGAGCAGCGCAGGTACACCTGCTCCACCTCCTaGCTGCGTGCCTCTCGGGTGAGCCCACCCGCAAGCTCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: STEPAEQRRYTCSTS*LRASRVSPPASSAT Trigger: AGTGGCAGAGCTTGCGGGTGGGCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS GCA 72 bp | CACTCCACAGAGCCTGCGGAGCAGCGCAGGTACACCTaGTCCACCTCCTTGCTGCGTGCCTCTCGGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HSTEPAEQRRYT*STSLLRASRVS Trigger: GCTCACCCGAGAGGCACGCAGCAAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000125580.2 |
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| CDS CCA 72 bp | GCCGAGGGCTCCGGTCCAGGTCCAGGGAGTCCACGCTaGAATCACCCGCAAGACTCACCTCCCCTTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AEGSGPGPGSPR*NHPQDSPPLPA Trigger: AGCTGGAAGGGGAGGTGAGTCTTGCGGGTGATTCCAGCGTGGACTCCCTGGACCTGGACCGGAGCCCTCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125580.2 |
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| CDS GCA 72 bp | GAGCGCCCCAGTTGGGTACATCCACTCCACAGAGCCTaGGGAGCAGCGCAGGTACACCTGCTCCACCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ERPSWVHPLHRA*GAAQVHLLHLL Trigger: AAGGAGGTGGAGCAGGTGTACCTGCGCTGCTCCGCAGGCTCTGTGGAGTGGATGTACCCAACTGGGGCGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000125580.2 |
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| CDS GCA 72 bp | CAGGGGGCAGACAGCACGTGCAGGTCCAGTCCCCTCTaGCCACTCATCAGCTCATACTGGAAGCCTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QGADSTCRSSPL*PLISSYWKPVV Trigger: GACCACAGGCTTCCAGTATGAGCTGATGAGTGGGCAGAGGGGACTGGACCTGCACGTGCTGTCTGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS GCA 72 bp | AGTGGCCACTGTCCTCAGGAGCTGGCTGGAAGACCCTaGTCTTCTGCCTGTGAAGCCTGTTCACCCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SGHCPQELAGRP*SSACEACSPAG Trigger: ACCTGCGGGTGAACAGGCTTCACAGGCAGAAGAGCAGGGTCTTCCAGCCAGCTCCTGAGGACAGTGGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 72 bp | TCCACAAATAAGCCTCCCTGCTCCAGGCTGAAGCACTaGACTTGGCCAGGCTCACCTCTGATGTCCCGCACC | + |
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Preference number: 6 (lower is better) Translates to: STNKPPCSRLKH*TWPGSPLMSRT Trigger: GGTGCGGGACATCAGAGGTGAGCCTGGCCAAGTGCAGTGCTTCAGCCTGGAGCAGGGAGGCTTATTTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS GCA 72 bp | TCCTGTTGGGGTGTCGCCTCCACAAATAAGCCTCCCTaGTCCAGGCTGAAGCACTGCACTTGGCCAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCWGVASTNKPP*SRLKHCTWPGS Trigger: TGAGCCTGGCCAAGTGCAGTGCTTCAGCCTGGAGCAGGGAGGCTTATTTGTGGAGGCGACACCCCAACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS CAA 72 bp | ATGCACACAGTCAAGTTCTGGGCAGGTGAGAAGGTGTaGGGCCGTAGGTTAACAATGAGCGCCCCAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: MHTVKFWAGEKV*GRRLTMSAPVG Trigger: CCCAACTGGGGCGCTCATTGTTAACCTACGGCCCAACACCTTCTCACCTGCCCAGAACTTGACTGTGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS TCA 72 bp | ATCCAAGTTGTGCCTCCCCAAAGTGCACATGTCCAGTaGAGAGGAATTCCCCATGCCCTGGTCGTACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IQVVPPQSAHVQ*RGIPHALVVLH Trigger: GTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACATGTGCACTTTGGGGAGGCACAACTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 72 bp | CCAAAGTGCACATGTCCAGTGAAGAGGAATTCCCCATaGCCTGGTCGTACTCCACACTGCAGCAGTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: PKCTCPVKRNSP*PGRTPHCSSVV Trigger: CACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACATGTGCACTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CCA 72 bp | GTGCACATGTCCAGTGAAGAGGAATTCCCCATGCCCTaGTCGTACTCCACACTGCAGCAGTGTTGTGACATG | + |
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Preference number: 6 (lower is better) Translates to: VHMSSEEEFPMP*SYSTLQQCCDM Trigger: CATGTCACAACACTGCTGCAGTGTGGAGTACGACCAGGGCATGGGGAATTCCTCTTCACTGGACATGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CAA 90 bp | AAAGGCTTGATGCACACAGTCAAGTTCTGGGCAGGTGAGAAGGTGTaGGGCCGTAGGTTAACAATGAGCGCCCCAGTTGGGTACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: KGLMHTVKFWAGEKV*GRRLTMSAPVGYIH Trigger: GTGGATGTACCCAACTGGGGCGCTCATTGTTAACCTACGGCCCAACACCTTCTCACCTGCCCAGAACTTGACTGTGTGCATCAAGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000125580.2 |
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| CDS TCA 72 bp | TCATCAGCTCATACTGGAAGCCTGTGGTCCTTCTGCTaGTGTCCTGTTGGGGTGTCGCCTCCACAAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSAHTGSLWSFC*CPVGVSPPQIS Trigger: GCTTATTTGTGGAGGCGACACCCCAACAGGACATCAGCAGAAGGACCACAGGCTTCCAGTATGAGCTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS CCA 72 bp | GAGTCCCTGAAAGGCTTGATGCACACAGTCAAGTTCTaGGCAGGTGAGAAGGTGTTGGGCCGTAGGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: ESLKGLMHTVKF*AGEKVLGRRLT Trigger: TGTTAACCTACGGCCCAACACCTTCTCACCTGCCCAGAACTTGACTGTGTGCATCAAGCCTTTCAGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 ENSMUST00000125580.2 |
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| CDS GCA 72 bp | TTGAAAGTCACTAAAGCGTGGGGCACATCCAAGTTGTaGCTCCCCAAAGTGCACATGTCCAGTGAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LKVTKAWGTSKL*LPKVHMSSEEE Trigger: TTCCTCTTCACTGGACATGTGCACTTTGGGGAGGCACAACTTGGATGTGCCCCACGCTTTAGTGACTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS CAA 90 bp | TTCACAGGGGTTTATGCCCATTTCTTCTGCTTTCCTGTACATCCTTaGAAAGTCACTAAAGCGTGGGGCACATCCAAGTTGTGCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: FTGVYAHFFCFPVHP*KVTKAWGTSKLCLP Trigger: GGGGAGGCACAACTTGGATGTGCCCCACGCTTTAGTGACTTTCAAAGGATGTACAGGAAAGCAGAAGAAATGGGCATAAACCCCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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| CDS GCA 72 bp | CATATTGATTTCACAGGGGTTTATGCCCATTTCTTCTaGTTTCCTGTACATCCTTTGAAAGTCACTAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: HIDFTGVYAHFF*FPVHPLKVTKA Trigger: CGCTTTAGTGACTTTCAAAGGATGTACAGGAAAGCAGAAGAAATGGGCATAAACCCCTGTGAAATCAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036742.14 ENSMUST00000106089.8 |
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