Pregenerated sensors for METRN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002274Ensembl transcript IDs: ENSMUST00000002344.7, ENSMUST00000165838.9, ENSMUST00000235925.2, ENSMUST00000236963.2, ENSMUST00000238040.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAGCACAGCCCAGCCAAGCTTCGCCAAATCGGCTCCAGCCCATaGAGAGGAAGGAGCCTGGGCCAGGACGCACACCACAGCGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GEHSPAKLRQIGSSP*RGRSLGQDAHHSAA Trigger: TGCTGCGCTGTGGTGTGCGTCCTGGCCCAGGCTCCTTCCTCTTCATGGGCTGGAGCCGATTTGGCGAAGCTTGGCTGGGCTGTGCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CCA 90 bp | GGACGCACACCACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTTaGCCCTCCGAGCTCCCTTCCTTGAACAGTGGCAGTGTCTGGCGG | + |
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Preference number: 1 (lower is better) Translates to: GRTPQRSKVRMEARP*PSELPSLNSGSVWR Trigger: CCGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGGTGTGCGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR GCA 90 bp | ACAAGCAGGATCCTGCAGAGGAGACCCCACACCCTGCAGGCTCTCTaGCATGTCTGGATGCTCAGCACGTCTCAGGGGCCTCCGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: TSRILQRRPHTLQAL*HVWMLSTSQGPPDR Trigger: TCTGTCCGGAGGCCCCTGAGACGTGCTGAGCATCCAGACATGGCAGAGAGCCTGCAGGGTGTGGGGTCTCCTCTGCAGGATCCTGCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | GCCGGAAACGAACAAGCAGGATCCTGCAGAGGAGACCCCACACCCTaGAGGCTCTCTGCCATGTCTGGATGCTCAGCACGTCTCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: AGNEQAGSCRGDPTP*RLSAMSGCSARLRG Trigger: GCCCCTGAGACGTGCTGAGCATCCAGACATGGCAGAGAGCCTGCAGGGTGTGGGGTCTCCTCTGCAGGATCCTGCTTGTTCGTTTCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | CCAAGCTTCGCCAAATCGGCTCCAGCCCATGAAGAGGAAGGAGCCTaGGCCAGGACGCACACCACAGCGCAGCAAGGTACGAATGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PSFAKSAPAHEEEGA*ARTHTTAQQGTNGG Trigger: GCCTCCATTCGTACCTTGCTGCGCTGTGGTGTGCGTCCTGGCCCAGGCTCCTTCCTCTTCATGGGCTGGAGCCGATTTGGCGAAGCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CCA 90 bp | AATGGAGGCCCGGCCTTGGCCCTCCGAGCTCCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGACACGAGCAACCACCACAGTGATGAC | + |
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Preference number: 1 (lower is better) Translates to: NGGPALALRAPFLEQ*QCLADDTSNHHSDD Trigger: GTCATCACTGTGGTGGTTGCTCGTGTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR GCA 90 bp | CCCAGGAAGCCCTGGCAACTTGACCTGACATTGGCACCCACACTCTaGTCCTCAGCTGCCAGGGCTCTACTTGGAGGTGTCTCTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PRKPWQLDLTLAPTL*SSAARALLGGVSAP Trigger: AGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR TCA 90 bp | TGGCAGTACTCTAAGACCAAGAGCACCCAGGAAGCCCTGGCAACTTaGCCTGACATTGGCACCCACACTCTGCTCCTCAGCTGCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: WQYSKTKSTQEALAT*PDIGTHTLLLSCQG Trigger: GCCCTGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGGTGCTCTTGGTCTTAGAGTACTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | CGGCCTTGGCCCTCCGAGCTCCCTTCCTTGAACAGTGGCAGTGTCTaGCGGATGACACGAGCAACCACCACAGTGATGACTGATTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RPWPSELPSLNSGSV*RMTRATTTVMTDSC Trigger: GCAAGAATCAGTCATCACTGTGGTGGTTGCTCGTGTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR TCA 90 bp | TGGCAGTGTCTGGCGGATGACACGAGCAACCACCACAGTGATGACTaGTTCTTGCAGCTCTGTGTCATGGGCGACCCCATGGATGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: WQCLADDTSNHHSDD*FLQLCVMGDPMDGP Trigger: GGGACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATCAGTCATCACTGTGGTGGTTGCTCGTGTCATCCGCCAGACACTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR TCA 90 bp | GTCCAGTGCCATCTCACATGGGTTGAGATGGGTCGTGAGAGCAGCTaGATAGACACGGCTGAACTCTTGGAAGCGGGGAGCACAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VQCHLTWVEMGRESS*IDTAELLEAGSTAQ Trigger: CTGGGCTGTGCTCCCCGCTTCCAAGAGTTCAGCCGTGTCTATTCAGCTGCTCTCACGACCCATCTCAACCCATGTGAGATGGCACTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CCA 90 bp | GCTGCTCCTGGCAGTACTCTAAGACCAAGAGCACCCAGGAAGCCCTaGCAACTTGACCTGACATTGGCACCCACACTCTGCTCCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: AAPGSTLRPRAPRKP*QLDLTLAPTLCSSA Trigger: AGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGGTGCTCTTGGTCTTAGAGTACTGCCAGGAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | AGGGCAGCAGACTGGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTaGGTATGCTGCCTGCCACAGAAGACCATGACTACAGTGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RAADWRVDKVRQAQS*VCCLPQKTMTTVAG Trigger: ACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTCTGCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | GACTGGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTGGGTATGCTaGCTGCCACAGAAGACCATGACTACAGTGGCTGGTATGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: DWRVDKVRQAQSWVC*LPQKTMTTVAGMVQ Trigger: CTGGACCATACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | GCAGACTGGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTGGGTATaGTGCCTGCCACAGAAGACCATGACTACAGTGGCTGGTATGGTC | + |
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Preference number: 1 (lower is better) Translates to: ADWRVDKVRQAQSWV*CLPQKTMTTVAGMV Trigger: GACCATACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | AGCTCACTGGTCAGCAGGCTAAGAAGGGTTAGAAGGGCAGCAGACTaGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTGGGTATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SSLVSRLRRVRRAAD*RVDKVRQAQSWVCC Trigger: GCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTCTGCTGCCCTTCTAACCCTTCTTAGCCTGCTGACCAGTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR TCA 90 bp | ATTCCGGGGGCCTATGTAGGGTGTGGCACCACCATTGTCATAGTCTaGGGCAAGGAACCATATGTCTGGTCTCTGCACAGCCTTGTCACT | + |
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Preference number: 1 (lower is better) Translates to: IPGAYVGCGTTIVIV*GKEPYVWSLHSLVT Trigger: AGTGACAAGGCTGTGCAGAGACCAGACATATGGTTCCTTGCCTCAGACTATGACAATGGTGGTGCCACACCCTACATAGGCCCCCGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR TCA 90 bp | TCTCTACTGTTTGGAGTCTTCACCACCTGTTCCCTAGAGCAGACTTaGGGCCACTGGACCAGCCTTCCCCTACCAGATGGAAAGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLLFGVFTTCSLEQT*GHWTSLPLPDGKTR Trigger: CCTTGTCTTTCCATCTGGTAGGGGAAGGCTGGTCCAGTGGCCTCAAGTCTGCTCTAGGGAACAGGTGGTGAAGACTCCAAACAGTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | GTAGTAGCAAGGGGCCGATTCAGAGGCAGATATGGAGGGAGAAAATaGAATGGCCTACTCTTCAGGAGTGATCTCGGACTCTCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: VVARGRFRGRYGGRK*NGLLFRSDLGLSVP Trigger: GGGCACTGAGAGTCCGAGATCACTCCTGAAGAGTAGGCCATTGCATTTTCTCCCTCCATATCTGCCTCTGAATCGGCCCCTTGCTACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | AGGACAGGTGTCGCAAGACAGCATGTATTCTGTGTACATGTATTCTaGAGAGAGGCTCTGCTCCATCCAGCTCAGAACCTGGCCACCGGA | + |
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Preference number: 1 (lower is better) Translates to: RTGVARQHVFCVHVF*REALLHPAQNLATG Trigger: TCCGGTGGCCAGGTTCTGAGCTGGATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGACACCTGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | TGTCTCTGCTCCTCGCAAGGCTTTCCCAGGCTAGCTCCTGTGATTTaGGTCCTGCTTATACACACCATCCTCCTTGCTGTCTCTGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: CLCSSQGFPRLAPVI*VLLIHTILLAVSVS Trigger: AGAGACAGAGACAGCAAGGAGGATGGTGTGTATAAGCAGGACCCAAATCACAGGAGCTAGCCTGGGAAAGCCTTGCGAGGAGCAGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | GTGATCTCGGACTCTCAGTGCCCTTCCCTCTCCAGAAGCAGTCTATaGAAAAGGAGCATGCTCTCTGTCCACCCTCAGATTACACAGATG | + |
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Preference number: 1 (lower is better) Translates to: VISDSQCPSLSRSSL*KRSMLSVHPQITQM Trigger: CATCTGTGTAATCTGAGGGTGGACAGAGAGCATGCTCCTTTTCCATAGACTGCTTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR TCA 90 bp | AGGCAGATATGGAGGGAGAAAATGCAATGGCCTACTCTTCAGGAGTaGTCTCGGACTCTCAGTGCCCTTCCCTCTCCAGAAGCAGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: RQIWREKMQWPTLQE*SRTLSALPSPEAVY Trigger: ATAGACTGCTTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGATCACTCCTGAAGAGTAGGCCATTGCATTTTCTCCCTCCATATCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | GAAAATGCAATGGCCTACTCTTCAGGAGTGATCTCGGACTCTCAGTaGCCTTCCCTCTCCAGAAGCAGTCTATGGAAAAGGAGCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: ENAMAYSSGVISDSQ*PSLSRSSLWKRSML Trigger: GAGCATGCTCCTTTTCCATAGACTGCTTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGATCACTCCTGAAGAGTAGGCCATTGCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | GAGCTGGGTATGCTGCCTGCCACAGAAGACCATGACTACAGTGGCTaGTATGGTCCAGATTACTTAGTATTCTACCAGCTCACTGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: ELGMLPATEDHDYSG*YGPDYLVFYQLTVG Trigger: ACCCACAGTGAGCTGGTAGAATACTAAGTAATCTGGACCATACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 90 bp | CTGCTTATACACACCATCCTCCTTGCTGTCTCTGTCTCTACTGTTTaGAGTCTTCACCACCTGTTCCCTAGAGCAGACTTGAGGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: LLIHTILLAVSVSTV*SLHHLFPRADLRPL Trigger: CAGTGGCCTCAAGTCTGCTCTAGGGAACAGGTGGTGAAGACTCCAAACAGTAGAGACAGAGACAGCAAGGAGGATGGTGTGTATAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | CTTTCAAGCCACAGGCTTTGTCTGCTCAGGGTCTCACTAGCCTTTTaGGAAATAATGAGGCCCAGGAGAAAGGCAGGCATAGCAACAATG | + |
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Preference number: 1 (lower is better) Translates to: LSSHRLCLLRVSLAF*EIMRPRRKAGIATM Trigger: CATTGTTGCTATGCCTGCCTTTCTCCTGGGCCTCATTATTTCGCAAAAGGCTAGTGAGACCCTGAGCAGACAAAGCCTGTGGCTTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | AGATTTATACCAGAGCCCTCCCACACACTGAATTCTAGACAGGGTTaGTTGGACATAGCTATTCCTGTCTGCTGCTCCTGGCAGTACTCT | + |
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Preference number: 1 (lower is better) Translates to: RFIPEPSHTLNSRQG*LDIAIPVCCSWQYS Trigger: AGAGTACTGCCAGGAGCAGCAGACAGGAATAGCTATGTCCAAGCAACCCTGTCTAGAATTCAGTGTGTGGGAGGGCTCTGGTATAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR GCA 90 bp | CAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTaGTCCATCCAGCTCAGAACCTGGCCACCGGAAGATTTATACCAG | + |
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Preference number: 1 (lower is better) Translates to: QDSMYSVYMYSAERL*SIQLRTWPPEDLYQ Trigger: CTGGTATAAATCTTCCGGTGGCCAGGTTCTGAGCTGGATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR TCA 90 bp | TGGAAAAGGAGCATGCTCTCTGTCCACCCTCAGATTACACAGATGTaGTTTAAGTTATCTGGTTATAAATATCCCAAAGAAGCCATTCCG | + |
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Preference number: 1 (lower is better) Translates to: WKRSMLSVHPQITQM*FKLSGYKYPKEAIP Trigger: CGGAATGGCTTCTTTGGGATATTTATAACCAGATAACTTAAATCACATCTGTGTAATCTGAGGGTGGACAGAGAGCATGCTCCTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 90 bp | AGGACGCACACCACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTaGGCCCTCCGAGCTCCCTTCCTTGAACAGTGGCAGTGTCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: RTHTTAQQGTNGGPA*ALRAPFLEQWQCLA Trigger: CGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGGTGTGCGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CAA 90 bp | AAGGTACGAATGGAGGCCCGGCCTTGGCCCTCCGAGCTCCCTTCCTaGAACAGTGGCAGTGTCTGGCGGATGACACGAGCAACCACCACA | + |
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Preference number: 2 (lower is better) Translates to: KVRMEARPWPSELPS*NSGSVWRMTRATTT Trigger: TGTGGTGGTTGCTCGTGTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCGGGGAGCACAGCCCAGCCAAGCTTCGCCAAATCGGCTCCAGCCCATGAATGCAGCTCTGTGTCATaGGCGACCCCATGGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: EAGSTAQPSFAKSAPAHECSSVS*ATPWMV Trigger: GACCATCCATGGGGTCGCCCATGACACAGAGCTGCA...TTCATGGGCTGGAGCCGATTTGGCGAAGCTTGGCTGGGCTGTGCTCCCCGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCGGGGAGCACAGCCCAGCCAAGCTTCGCCAAATCGGCTCCAGCCCATGAACCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: EAGSTAQPSFAKSAPAHEPFLEQ*QCLADD Trigger: GTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGG...TTCATGGGCTGGAGCCGATTTGGCGAAGCTTGGCTGGGCTGTGCTCCCCGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCAGGGCTCTACTTGGAGGTGTCTCTGCTCCTCGCAAGGCTTTCCCAGGAAACTACGGCACGGTTaGTCTGAACCCCAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SCQGSTWRCLCSSQGFPRKLRHG*SEPQQH Trigger: GTGCTGCTGGGGTTCAGAGCAACCGTGCCGTAGTTT...CCTGGGAAAGCCTTGCGAGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 90 bp | CTAAGACCAAGAGCACCCAGGAAGCCCTGGCAACTTGACCTGACATaGGCACCCACACTCTGCTCCTCAGCTGCCAGGGCTCTACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LRPRAPRKPWQLDLT*APTLCSSAARALLG Trigger: TCCAAGTAGAGCCCTGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGGTGCTCTTGGTCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 90 bp | AGCAACAATGGGGCCAGTGGCGGGAAACAGTCTTTAGAGACCCCATaGTCCATTTCTCCCGCCGGAAACGAACAAGCAGGATCCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SNNGASGGKQSLETP*SISPAGNEQAGSCR Trigger: TCTGCAGGATCCTGCTTGTTCGTTTCCGGCGGGAGAAATGGACAATGGGGTCTCTAAAGACTGTTTCCCGCCACTGGCCCCATTGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 90 bp | GTGTCTCTGCTCCTCGCAAGGCTTTCCCAGGCTAGCTCCTGTGATTaGGGTCCTGCTTATACACACCATCCTCCTTGCTGTCTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VSLLLARLSQASSCD*GPAYTHHPPCCLCL Trigger: GAGACAGAGACAGCAAGGAGGATGGTGTGTATAAGCAGGACCCAAATCACAGGAGCTAGCCTGGGAAAGCCTTGCGAGGAGCAGAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCCAGGGCTCTACTTGGAGGTGTCTCTGCTCCTCGCAAGGCTTTCCCAGGTCCAGAAGCAGTCTATaGAAAAGGAGCATGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SCQGSTWRCLCSSQGFPRSRSSL*KRSMLS Trigger: AGAGAGCATGCTCCTTTTCCATAGACTGCTTCTGGA...CCTGGGAAAGCCTTGCGAGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR-3UTR GCA 90 bp | TCGCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCATCTCGGACTCTCAGTaGCCTTCCCTCTCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SQDSMYSVYMYSAERLCSISDSQ*PSLSRS Trigger: GCTTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGAT...GGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCATTCCGGGGGCCTATGTAGGGTGTGGCACCACCATTGTCATAGTCTGCATGACTACAGTGGCTaGTATGGTCCAGATTACTTA | + |
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Preference number: 2 (lower is better) Translates to: RSHSGGLCRVWHHHCHSLHDYSG*YGPDYL Trigger: TAAGTAATCTGGACCATACCAGCCACTGTAGTCATG...CAGACTATGACAATGGTGGTGCCACACCCTACATAGGCCCCCGGAATGGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCTCACTCAAGGTCTTTCAAGCCACAGGCTTTGTCTGCTCAGGGTCTCACTCCAAGGATGACTGTATaGCTCACAAGGACCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPHSRSFKPQALSAQGLTPRMTV*LTRTME Trigger: TTCCATGGTCCTTGTGAGCCATACAGTCATCCTTGG...AGTGAGACCCTGAGCAGACAAAGCCTGTGGCTTGAAAGACCTTGAGTGAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 90 bp | TCTTTCAAGCCACAGGCTTTGTCTGCTCAGGGTCTCACTAGCCTTTaGCGAAATAATGAGGCCCAGGAGAAAGGCAGGCATAGCAACAAT | + |
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Preference number: 2 (lower is better) Translates to: SFKPQALSAQGLTSL*RNNEAQEKGRHSNN Trigger: ATTGTTGCTATGCCTGCCTTTCTCCTGGGCCTCATTATTTCGCAAAAGGCTAGTGAGACCCTGAGCAGACAAAGCCTGTGGCTTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR-3UTR GCA 90 bp | GCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCATTATGGAGGGAGAAAATaGAATGGCCTACTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ARQHVFCVHVFCREALLHYGGRK*NGLLFR Trigger: CCTGAAGAGTAGGCCATTGCATTTTCTCCCTCCATA...ATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CCA 72 bp | GGCCAGGACGCACACCACAGCGCAGCAAGGTACGAATaGAGGCCCGGCCTTGGCCCTCCGAGCTCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GQDAHHSAARYE*RPGLGPPSSLP Trigger: AGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGGTGTGCGTCCTGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CCA 72 bp | CCGGCCTTGGCCCTCCGAGCTCCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGACACGAGCAACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: PALALRAPFLEQ*QCLADDTSNHH Trigger: GTGGTGGTTGCTCGTGTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| 3UTR CCA 72 bp | CCACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTTaGCCCTCCGAGCTCCCTTCCTTGAACAGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PQRSKVRMEARP*PSELPSLNSGS Trigger: ACTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| 3UTR CCA 72 bp | GCCAAATCGGCTCCAGCCCATGAAGAGGAAGGAGCCTaGGCCAGGACGCACACCACAGCGCAGCAAGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: AKSAPAHEEEGA*ARTHTTAQQGT Trigger: CGTACCTTGCTGCGCTGTGGTGTGCGTCCTGGCCCAGGCTCCTTCCTCTTCATGGGCTGGAGCCGATTTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| 3UTR CCA 72 bp | ACCCACACTCTGCTCCTCAGCTGCCAGGGCTCTACTTaGAGGTGTCTCTGCTCCTCGCAAGGCTTTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: THTLLLSCQGST*RCLCSSQGFPR Trigger: CCTGGGAAAGCCTTGCGAGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCTGAGGAGCAGAGTGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | GACCAAGAGCACCCAGGAAGCCCTGGCAACTTGACCTaGCATTGGCACCCACACTCTGCTCCTCAGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQEHPGSPGNLT*HWHPHSAPQLP Trigger: TGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGGTGCTCTTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | GAACAAGCAGGATCCTGCAGAGGAGACCCCACACCCTaGAGGCTCTCTGCCATGTCTGGATGCTCAGCACGT | + |
|
Preference number: 3 (lower is better) Translates to: EQAGSCRGDPTP*RLSAMSGCSAR Trigger: ACGTGCTGAGCATCCAGACATGGCAGAGAGCCTGCAGGGTGTGGGGTCTCCTCTGCAGGATCCTGCTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | CCCTGGCAACTTGACCTGACATTGGCACCCACACTCTaGTCCTCAGCTGCCAGGGCTCTACTTGGAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PWQLDLTLAPTL*SSAARALLGGV Trigger: GACACCTCCAAGTAGAGCCCTGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CCA 72 bp | TCTGCAGAGAGGCTCTGCTCCATCCAGCTCAGAACCTaGCCACCGGAAGATTTATACCAGAGCCCTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SAERLCSIQLRT*PPEDLYQSPPT Trigger: TGTGGGAGGGCTCTGGTATAAATCTTCCGGTGGCCAGGTTCTGAGCTGGATGGAGCAGAGCCTCTCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | CACAGCACGGGAGCTGAAGCTGTTTCCCAGGAGCCATaGGGTAGAGGCAGAAGAAATCTGACGGACGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HSTGAEAVSQEP*GRGRRNLTDVL Trigger: TAGGACGTCCGTCAGATTTCTTCTGCCTCTACCTCATGGCTCCTGGGAAACAGCTTCAGCTCCCGTGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | CATCTCACATGGGTTGAGATGGGTCGTGAGAGCAGCTaGATAGACACGGCTGAACTCTTGGAAGCGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLTWVEMGRESS*IDTAELLEAGS Trigger: GCTCCCCGCTTCCAAGAGTTCAGCCGTGTCTATTCAGCTGCTCTCACGACCCATCTCAACCCATGTGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| 3UTR GCA 72 bp | GTAGACAAAGTGAGGCAGGCACAGAGCTGGGTATGCTaGCTGCCACAGAAGACCATGACTACAGTGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VDKVRQAQSWVC*LPQKTMTTVAG Trigger: ACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | AACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTaGTCCCAGGTCTCTCAGTCCAGTGCCATCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: NTPSPEEGPSRA*SQVSQSSAISH Trigger: ATGTGAGATGGCACTGGACTGAGAGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| 3UTR CCA 72 bp | GTCAGCAGGCTAAGAAGGGTTAGAAGGGCAGCAGACTaGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSRLRRVRRAAD*RVDKVRQAQSW Trigger: CCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTCTGCTGCCCTTCTAACCCTTCTTAGCCTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | AGAGTAGACAAAGTGAGGCAGGCACAGAGCTGGGTATaGTGCCTGCCACAGAAGACCATGACTACAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVDKVRQAQSWV*CLPQKTMTTVA Trigger: AGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | CCAGAGCCCTCCCACACACTGAATTCTAGACAGGGTTaGTTGGACATAGCTATTCCTGTCTGCTGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PEPSHTLNSRQG*LDIAIPVCCSW Trigger: CCAGGAGCAGCAGACAGGAATAGCTATGTCCAAGCAACCCTGTCTAGAATTCAGTGTGTGGGAGGGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | ATGACACGAGCAACCACCACAGTGATGACTGATTCTTaGAGCTCTGTGTCATGGGCGACCCCATGGATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MTRATTTVMTDS*SSVSWATPWMV Trigger: GACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATCAGTCATCACTGTGGTGGTTGCTCGTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| 3UTR CCA 72 bp | GACTGGAGAGTAGACAAAGTGAGGCAGGCACAGAGCTaGGTATGCTGCCTGCCACAGAAGACCATGACTACA | + |
|
Preference number: 3 (lower is better) Translates to: DWRVDKVRQAQS*VCCLPQKTMTT Trigger: TGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTCTACTCTCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CCA 72 bp | TCCTCGCAAGGCTTTCCCAGGCTAGCTCCTGTGATTTaGGTCCTGCTTATACACACCATCCTCCTTGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSQGFPRLAPVI*VLLIHTILLAV Trigger: GACAGCAAGGAGGATGGTGTGTATAAGCAGGACCCAAATCACAGGAGCTAGCCTGGGAAAGCCTTGCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | GCCTATGTAGGGTGTGGCACCACCATTGTCATAGTCTaGGGCAAGGAACCATATGTCTGGTCTCTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AYVGCGTTIVIV*GKEPYVWSLHS Trigger: GCTGTGCAGAGACCAGACATATGGTTCCTTGCCTCAGACTATGACAATGGTGGTGCCACACCCTACATAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | TGGAGGGAGAAAATGCAATGGCCTACTCTTCAGGAGTaGTCTCGGACTCTCAGTGCCCTTCCCTCTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WREKMQWPTLQE*SRTLSALPSPE Trigger: TTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGATCACTCCTGAAGAGTAGGCCATTGCATTTTCTCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | ATGGCCTACTCTTCAGGAGTGATCTCGGACTCTCAGTaGCCTTCCCTCTCCAGAAGCAGTCTATGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MAYSSGVISDSQ*PSLSRSSLWKR Trigger: CCTTTTCCATAGACTGCTTCTGGAGAGGGAAGGGCACTGAGAGTCCGAGATCACTCCTGAAGAGTAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | CACAGAGCTGGGTATGCTGCCTGCCACAGAAGACCATaGCTACAGTGGCTGGTATGGTCCAGATTACTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HRAGYAACHRRP*LQWLVWSRLLS Trigger: ACTAAGTAATCTGGACCATACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | TTAGCTCAAGTCTTCCAAACTACGGCACGGTTGCTCTaGACCCCAGCAGCACCCTGGAATTCGAGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LAQVFQTTARLL*TPAAPWNSRKT Trigger: TGTTTTCCTCGAATTCCAGGGTGCTGCTGGGGTTCAGAGCAACCGTGCCGTAGTTTGGAAGACTTGAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | GTCTGGTCTCTGCACAGCCTTGTCACTCTCCCAGTCTaGATGAATAGTCTGTTGGGACTGATGATGGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VWSLHSLVTLPV*MNSLLGLMMGE Trigger: TTCACCCATCATCAGTCCCAACAGACTATTCATTCAGACTGGGAGAGTGACAAGGCTGTGCAGAGACCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | GTCGCAAGACAGCATGTATTCTGTGTACATGTATTCTaGAGAGAGGCTCTGCTCCATCCAGCTCAGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: VARQHVFCVHVF*REALLHPAQNL Trigger: CAGGTTCTGAGCTGGATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CCA 72 bp | AGAAGTAGTAGCAAGGGGCCGATTCAGAGGCAGATATaGAGGGAGAAAATGCAATGGCCTACTCTTCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSSKGPIQRQI*REKMQWPTLQE Trigger: CTCCTGAAGAGTAGGCCATTGCATTTTCTCCCTCCATATCTGCCTCTGAATCGGCCCCTTGCTACTACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | CTTCCCTCTCCAGAAGCAGTCTATGGAAAAGGAGCATaGTCTCTGTCCACCCTCAGATTACACAGATGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPSPEAVYGKGA*SLSTLRLHRCD Trigger: ATCACATCTGTGTAATCTGAGGGTGGACAGAGAGCATGCTCCTTTTCCATAGACTGCTTCTGGAGAGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CCA 72 bp | ATGCTGCCTGCCACAGAAGACCATGACTACAGTGGCTaGTATGGTCCAGATTACTTAGTATTCTACCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: MLPATEDHDYSG*YGPDYLVFYQL Trigger: GAGCTGGTAGAATACTAAGTAATCTGGACCATACCAGCCACTGTAGTCATGGTCTTCTGTGGCAGGCAGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCATAGCACTCCATGGAGCTaGGGGAGAAGAGAAGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ARQHVFCVHVFCREALLHSTPWS*GRREVV Trigger: TACTACTTCTCTTCTCCCCAAGCTCCATGGAGTGCT...ATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR GCA 72 bp | TGTGATTTGGGTCCTGCTTATACACACCATCCTCCTTaGTGTCTCTGTCTCTACTGTTTGGAGTCTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: CDLGPAYTHHPP*CLCLYCLESSP Trigger: TGGTGAAGACTCCAAACAGTAGAGACAGAGACAGCAAGGAGGATGGTGTGTATAAGCAGGACCCAAATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR TCA 72 bp | AGCATGCTCTCTGTCCACCCTCAGATTACACAGATGTaGTTTAAGTTATCTGGTTATAAATATCCCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SMLSVHPQITQM*FKLSGYKYPKE Trigger: TTCTTTGGGATATTTATAACCAGATAACTTAAATCACATCTGTGTAATCTGAGGGTGGACAGAGAGCATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR GCA 90 bp | CCACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTTGGCCCTCCGAGCTCCCTCGGTGTGGTGTGGCCTaGCCCTCCAGCTGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRSKVRMEARPWPSELPRCGVA*PSSCSG Trigger: ACCGCTGCAGCTGGAGGGGCAGGCCACACCACACCG...AGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCCAGTCCAGGGTCAGCTaGCCCACGCTGCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWVPGCHPSHTLLTHPPQSRVS*PTLPGS Trigger: GGAGCCTGGCAGCGTGGGGCAGCTGACCCTGGACTG...GGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACAGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR GCA 90 bp | CACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTTGGCCCTCCGAGCTCCCTTGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAARYEWRPGLGPPSSLGARHH*RACRHH Trigger: ATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCC...AAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCCGCTGCCCCTCCAGCTaGAGCGGTCTTCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWVPGCHPSHTLLTHPPRCPSS*SGLPSS Trigger: GCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGCG...GGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGCGGGGAGCACAGCCCAGCCAAGCTTCGCCAAATCGGCTCCAGCCCATGCCTGCCCCTCCAGCTaGAGCGGTCTTCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAGSTAQPSFAKSAPAHACPSS*SGLPSS Trigger: GCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGGC...ATGGGCTGGAGCCGATTTGGCGAAGCTTGGCTGGGCTGTGCTCCCCGCTTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCACGGTGTGGTGTGGCCTaGCCCTCCAGCTGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPPQHPISRRRSIQGLLPRCGVA*PSSCSG Trigger: ACCGCTGCAGCTGGAGGGGCAGGCCACACCACACCG...TGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
||
| 3UTR CAA 72 bp | ACCACAGCGCAGCAAGGTACGAATGGAGGCCCGGCCTaGGCCCTCCGAGCTCCCTTCCTTGAACAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTAQQGTNGGPA*ALRAPFLEQWQ Trigger: CTGCCACTGTTCAAGGAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATTCGTACCTTGCTGCGCTGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCCTGGGTCAAACCGCTaGCCCTCCAGCTGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQHPISRRRSIQGLLPGPGSNR*PSSCSG Trigger: ACCGCTGCAGCTGGAGGGGCAGCGGTTTGACCCAGG...ACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | TCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCGCGCAGCGCCCCAGCTaGGTACAGCCACTCGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPTPHLQKKVHPGLAPAQRPS*VQPLDS Trigger: GCTATCGAGTGGCTGTACCCAGCTGGGGCGCTGCGC...GGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCATCAGCGAAGGGCCGCTCTaGGCGCAGACAGACGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVPGCHPSHTLLTHPPISEGPL*AQTDDA Trigger: AGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCT...GATGGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCATCACGTTCAGCGAAGACCTaGGCACCAGCGAAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CGYQDAIRATPFSPTLPSRSAKT*APAKGR Trigger: GCGGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACG...TGATGGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR GCA 90 bp | TCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSPTPHLQKKVHPGLAPGARHH*RACRHH Trigger: ATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCC...GGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPQHPISRRRSIQGLLPGGARHH*RACRHH Trigger: ATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCC...ACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTGCCTGCCCCTCCAGCTaGAGCGGTCTTCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTPHLQKKVHPGLAPRSACPSS*SGLPSS Trigger: GCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGGC...AGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCTGTCGCGGTGTGGTGTaGCCTGCAGGAAAAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLWVPGCHPSHTLLTHPPCRGVV*PAGKGL Trigger: GAGCCCTTTTCCTGCAGGCCACACCACACCGCGACA...GGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCGAAGAGGAAGGAGCCTaGGCCAGGACGCACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLWVPGCHPSHTLLTHPPEEEGA*ARTHTT Trigger: TGTGGTGTGCGTCCTGGCCCAGGCTCCTTCCTCTTC...GGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGGCTGATGTCGCGGTGTaGTGTGGCCTGCAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPTPHLQKKVHPGLAPRADVAV*CGLQEK Trigger: CTTTTCCTGCAGGCCACACCACACCGCGACATCAGC...CCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGAAGAGGAAGGAGCCTaGGCCAGGACGCACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQEEEGA*ARTHTT Trigger: TGTGGTGTGCGTCCTGGCCCAGGCTCCTTCCTCTTC...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTACGCTGCCAGGCTCCTaGGTCAAACCGCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SPTPHLQKKVHPGLAPRSTLPGS*VKPLGT Trigger: TGTCCCCAGCGGTTTGACCCAGGAGCCTGGCAGCGT...AGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGCATGGTGGCCAGTGGTaGGCACGTGGGAATGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQHGGQW*ARGNVR Trigger: CCTCACATTCCCACGTGCCCACCACTGGCCACCATG...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGTACGAGGAGACATGGTaGCCAGTGGTGGGCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQYEETW*PVVGTW Trigger: CCACGTGCCCACCACTGGCCACCATGTCTCCTCGTA...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCGGGCGACCCCATGGATaGTCCCGTGGATCACTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LPNTPSPEEGPSRACSQVGRPHG*SRGSLR Trigger: TCGTAGTGATCCACGGGACCATCCATGGGGTCGCCC...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| 3UTR CAA 72 bp | CACCCACACTCTGCTCCTCAGCTGCCAGGGCTCTACTaGGAGGTGTCTCTGCTCCTCGCAAGGCTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPHSAPQLPGLY*EVSLLLARLSQ Trigger: CTGGGAAAGCCTTGCGAGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCTGAGGAGCAGAGTGTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CAA 72 bp | AGAGCACCCAGGAAGCCCTGGCAACTTGACCTGACATaGGCACCCACACTCTGCTCCTCAGCTGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAPRKPWQLDLT*APTLCSSAARA Trigger: AGCCCTGGCAGCTGAGGAGCAGAGTGTGGGTGCCAATGTCAGGTCAAGTTGCCAGGGCTTCCTGGGTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| CDS-3UTR GCA 90 bp | AGCTGCCAGGGCTCTACTTGGAGGTGTCTCTGCTCCTCGCAAGGCTTTCCCAGGCATCACTGCAGGGCCTaGAGGCACCATCCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCQGSTWRCLCSSQGFPRHHCRA*RHHPHQ Trigger: TTGGTGTGGATGGTGCCTGCAGGCCCTGCAGTGATG...CCTGGGAAAGCCTTGCGAGGAGCAGAGACACCTCCAAGTAGAGCCCTGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAGCAGCACCCTGGAATTCGAGGAAAACATGAGCTCACTGGTCAGCAGGCGCAGCGCCCCAGCTaGGTACAGCCACTCGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPQQHPGIRGKHELTGQQAQRPS*VQPLDS Trigger: GCTATCGAGTGGCTGTACCCAGCTGGGGCGCTGCGC...CTGCTGACCAGTGAGCTCATGTTTTCCTCGAATTCCAGGGTGCTGCTGGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCTGTCGCGGTGTGGTGTaGCCTGCAGGAAAAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITLPNTPSPEEGPSRACSCRGVV*PAGKGL Trigger: GAGCCCTTTTCCTGCAGGCCACACCACACCGCGACA...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTGCAGCTCTGTGTCATaGGCGACCCCATGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPNTPSPEEGPSRACSQVCSSVS*ATPWMV Trigger: GACCATCCATGGGGTCGCCCATGACACAGAGCTGCA...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CCA 90 bp | TCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCTGCAGCTCTGTGTCATaGGCGACCCCATGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPTPHLQKKVHPGLAPCSSVS*ATPWMV Trigger: GACCATCCATGGGGTCGCCCATGACACAGAGCTGCA...GGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGCCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPTPHLQKKVHPGLAPRPFLEQ*QCLADD Trigger: GTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGG...CCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCCTGGGTCAAACCGCTaGGGACAGGACGGTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPNTPSPEEGPSRACSPGSNR*GQDGGS Trigger: AGAACCACCGTCCTGTCCCCAGCGGTTTGACCCAGG...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236963.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCCAGTGGTGGGCACGTaGGAATGTGAGGCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPNTPSPEEGPSRACSPVVGT*ECEADP Trigger: AGGGTCTGCCTCACATTCCCACGTGCCCACCACTGG...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCACTACGAGGAGACATaGTGGCCAGTGGTGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPNTPSPEEGPSRACSHYEET*WPVVGT Trigger: CGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTG...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATTCCGGGGGCCTATGTAGGGTGTGGCACCACCATTGTCATAGTCTGGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHSGGLCRVWHHHCHSLGARHH*RACRHH Trigger: ATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCC...CAGACTATGACAATGGTGGTGCCACACCCTACATAGGCCCCCGGAATGGCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | CACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCACCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPPQHPISRRRSIQGLLPPFLEQ*QCLADD Trigger: GTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGG...TGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGTCCACACCAAGACCTTaGGCCTGGGGAGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQSTPRP*AWGDIS Trigger: AGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGA...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTTCCACACCAAGACCTTaGGCCTGGGGAGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQHPISRRRSIQGLLPGSTPRP*AWGDIS Trigger: AGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGA...ACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTCCACACCAAGACCTTaGGCCTGGGGAGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPNTPSPEEGPSRACSQVSTPRP*AWGDIS Trigger: AGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGA...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR GCA 90 bp | CCCATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCCACCAAAATCACTGGTaGATGCAGCCAGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PITLPNTPSPEEGPSRACHQNHW*MQPGGA Trigger: AGCTCCTCCTGGCTGCATGCACCAGTGATTTTGGTG...GCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTTCCACACCAAGACCTTaGGCCTGGGGAGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPTPHLQKKVHPGLAPRSSTPRP*AWGDIS Trigger: AGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGA...AGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR GCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGTCACAAAATCACTGGTaGATGCAGCCAGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQSQNHW*MQPGGA Trigger: AGCTCCTCCTGGCTGCATGCACCAGTGATTTTGTGA...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 |
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| CDS-3UTR GCA 90 bp | CACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCATCACAAAATCACTGGTaGATGCAGCCAGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPPQHPISRRRSIQGLLPSQNHW*MQPGGA Trigger: AGCTCCTCCTGGCTGCATGCACCAGTGATTTTGTGA...TGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCGTGATGACTGATTCTTaGAGCTCTGTGTCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPNTPSPEEGPSRACSQVVMTDS*SSVSWA Trigger: CGCCCATGACACAGAGCTGCAAGAATCAGTCATCAC...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR GCA 90 bp | ACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTGATGACTGATTCTTaGAGCTCTGTGTCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLPNTPSPEEGPSRACSQVMTDS*SSVSWA Trigger: CGCCCATGACACAGAGCTGCAAGAATCAGTCATCAC...CTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CCA 90 bp | ACACCTCACTCAAGGTCTTTCAAGCCACAGGCTTTGTCTGCTCAGGGTCTCACTAGCGAAGGGCCGCTCTaGGCGCAGACAGACGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPHSRSFKPQALSAQGLTSEGPL*AQTDDA Trigger: AGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCT...AGTGAGACCCTGAGCAGACAAAGCCTGTGGCTTGAAAGACCTTGAGTGAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| CDS-3UTR CCA 90 bp | GACAAAGTGAGGCAGGCACAGAGCTGGGTATGCTGCCTGCCACAGAAGACCATGCCCTTCCTTGAACAGTaGCAGTGTCTGGCGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DKVRQAQSWVCCLPQKTMPFLEQ*QCLADD Trigger: GTCATCCGCCAGACACTGCCACTGTTCAAGGAAGGG...CATGGTCTTCTGTGGCAGGCAGCATACCCAGCTCTGTGCCTGCCTCACTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTTCACATGGGTTGAGATaGGTCGTGAGAGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPQHPISRRRSIQGLLPGSHGLR*VVRAAE Trigger: TTCAGCTGCTCTCACGACCCATCTCAACCCATGTGA...ACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CCA 90 bp | TCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCTCACATGGGTTGAGATaGGTCGTGAGAGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSPTPHLQKKVHPGLAPSHGLR*VVRAAE Trigger: TTCAGCTGCTCTCACGACCCATCTCAACCCATGTGA...GGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| 3UTR CAA 72 bp | GGGGCCAGTGGCGGGAAACAGTCTTTAGAGACCCCATaGTCCATTTCTCCCGCCGGAAACGAACAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GASGGKQSLETP*SISPAGNEQAG Trigger: TCCTGCTTGTTCGTTTCCGGCGGGAGAAATGGACAATGGGGTCTCTAAAGACTGTTTCCCGCCACTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| 3UTR CAA 72 bp | CAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTaGCTCCCAGGTCTCTCAGTCCAGTGCCATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QHPISRRRSIQG*LPGLSVQCHLT Trigger: TGTGAGATGGCACTGGACTGAGAGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235925.2 |
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| CDS-3UTR GCA 90 bp | GCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCATCAGTCCAGGGTCAGCTaGCCCACGCTGCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARQHVFCVHVFCREALLHQSRVS*PTLPGS Trigger: GGAGCCTGGCAGCGTGGGGCAGCTGACCCTGGACTG...ATGGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCTCACATGGGTTGAGATaGGTCGTGAGAGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITLPNTPSPEEGPSRACSSHGLR*VVRAAE Trigger: TTCAGCTGCTCTCACGACCCATCTCAACCCATGTGA...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCTACTCACCAAAATCACTaGTGCATGCAGCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTPHLQKKVHPGLAPRSTHQNH*CMQPGG Trigger: TCCTCCTGGCTGCATGCACCAGTGATTTTGGTGAGT...AGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
||
| 3UTR CAA 72 bp | GAGCCCTCCCACACACTGAATTCTAGACAGGGTTGCTaGGACATAGCTATTCCTGTCTGCTGCTCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSHTLNSRQGC*DIAIPVCCSWQ Trigger: CTGCCAGGAGCAGCAGACAGGAATAGCTATGTCCAAGCAACCCTGTCTAGAATTCAGTGTGTGGGAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAGCAGCACCCTGGAATTCGAGGAAAACATGAGCTCACTGGTCAGCAGTCACAAAATCACTGGTaGATGCAGCCAGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQQHPGIRGKHELTGQQSQNHW*MQPGGA Trigger: AGCTCCTCCTGGCTGCATGCACCAGTGATTTTGTGA...CTGCTGACCAGTGAGCTCATGTTTTCCTCGAATTCCAGGGTGCTGCTGGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| 3UTR CAA 72 bp | CCACAGGCTTTGTCTGCTCAGGGTCTCACTAGCCTTTaGCGAAATAATGAGGCCCAGGAGAAAGGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQALSAQGLTSL*RNNEAQEKGRH Trigger: ATGCCTGCCTTTCTCCTGGGCCTCATTATTTCGCAAAAGGCTAGTGAGACCCTGAGCAGACAAAGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | TCGCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCTGCAGCTCTGTGTCATaGGCGACCCCATGGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQDSMYSVYMYSAERLCSCSSVS*ATPWMV Trigger: GACCATCCATGGGGTCGCCCATGACACAGAGCTGCA...GGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGGTTATAAATATCCCAAAGAAGCCATTCCGGGGGCCTATGTAGGGTGTGCTGATGTCGCGGTGTaGTGTGGCCTGCAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGYKYPKEAIPGAYVGCADVAV*CGLQEK Trigger: CTTTTCCTGCAGGCCACACCACACCGCGACATCAGC...ACACCCTACATAGGCCCCCGGAATGGCTTCTTTGGGATATTTATAACCAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS-3UTR GCA 90 bp | TCGCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCGTGATGACTGATTCTTaGAGCTCTGTGTCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQDSMYSVYMYSAERLCSVMTDS*SSVSWA Trigger: CGCCCATGACACAGAGCTGCAAGAATCAGTCATCAC...GGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
||
| CDS GCA 90 bp | CAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATGCTGGGCCGTGTaGCCGGATCGGGGCCGCCCAGGGTCAGGCGCAGCGCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRRAALGADRRCWAV*PDRGRPGSGAAPQL Trigger: CAGCTGGGGCGCTGCGCCTGACCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS CCA 90 bp | CCTGGGCACCAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATGCTaGGCCGTGTGCCCGGATCGGGGCCGCCCAGGGTCAGGCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGHQRRAALGADRRC*AVCPDRGRPGSGAA Trigger: CGCTGCGCCTGACCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS GCA 90 bp | AGACCTGGGCACCAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATaGTGGGCCGTGTGCCCGGATCGGGGCCGCCCAGGGTCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPGHQRRAALGADRR*WAVCPDRGRPGSGA Trigger: TGCGCCTGACCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGGTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS CCA 90 bp | TGTGCCCGGATCGGGGCCGCCCAGGGTCAGGCGCAGCGCCCCAGCTaGGTACAGCCACTCGATAGCGCCCTCAGTACAGTCCAGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CARIGAAQGQAQRPS*VQPLDSALSTVQGQ Trigger: CTGACCCTGGACTGTACTGAGGGCGCTATCGAGTGGCTGTACCCAGCTGGGGCGCTGCGCCTGACCCTGGGCGGCCCCGATCCGGGCACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
||
| CDS CCA 90 bp | GGTCATACGTTCAGCGAAGACCTGGGCACCAGCGAAGGGCCGCTCTaGGCGCAGACAGACGATGCTGGGCCGTGTGCCCGGATCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHTFSEDLGTSEGPL*AQTDDAGPCARIGA Trigger: GGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACGTATGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 90 bp | GGGTACAGCCACTCGATAGCGCCCTCAGTACAGTCCAGGGTCAGCTaGCCCACGCTGCCAGGCTCCTGGGTCAAACCGCTGCCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYSHSIAPSVQSRVS*PTLPGSWVKPLPLQ Trigger: CTGGAGGGGCAGCGGTTTGACCCAGGAGCCTGGCAGCGTGGGGCAGCTGACCCTGGACTGTACTGAGGGCGCTATCGAGTGGCTGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 |
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| CDS GCA 90 bp | GGCCCCCAGCCAGGTCCGGGCCCTCGGCCAGTAGCAACTCTAGATTaGCGGTCATACGTTCAGCGAAGACCTGGGCACCAGCGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQPGPGPRPVATLD*RSYVQRRPGHQRRA Trigger: GGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTTGCTACTGGCCGAGGGCCCGGACCTGGCTGGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS TCA 90 bp | TCCTGGGTCAAACCGCTGGGGACAGGACGGTGGTTCTCAGGTGGGTaGCCCTCGTTCCCTAGCCCGCTCATCCCTTTTCCCGCGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: SWVKPLGTGRWFSGG*PSFPSPLIPFPAAT Trigger: GGTAGCCGCGGGAAAAGGGATGAGCGGGCTAGGGAACGAGGGTCACCCACCTGAGAACCACCGTCCTGTCCCCAGCGGTTTGACCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236963.2 |
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| CDS TCA 90 bp | GTTGGTCCTCGTGCAGTTCAAAACGGAAGGCAGCAACTCTGCGGCTaGTGTCGCGGTGTGGTGTGGCCTGCCCCTCCAGCTGCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGPRAVQNGRQQLCG*CRGVVWPAPPAAAV Trigger: GACCGCTGCAGCTGGAGGGGCAGGCCACACCACACCGCGACATCAGCCGCAGAGTTGCTGCCTTCCGTTTTGAACTGCACGAGGACCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCAATGGAGGCCCGGCCTaGGCCCTCCGAGCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITLPNTPSPEEGPSRACSNGGPA*ALRAPF Trigger: GAAGGGAGCTCGGAGGGCCAAGGCCGGGCCTCCATT...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS CCA 90 bp | GGCGACCCCATGGATGGTCCCGTGGATCACTACGAGGAGACATGGTaGCCAGTGGTGGGCACGTGGGAATGTGAGGCAGACCCTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDPMDGPVDHYEETW*PVVGTWECEADPKL Trigger: GAGCTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGGGTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | CCCATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCGACACGGCTGAACTCTaGGAAGCGGGGAGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PITLPNTPSPEEGPSRACDTAEL*EAGSTA Trigger: GGCTGTGCTCCCCGCTTCCAAGAGTTCAGCCGTGTC...GCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCGACACGGCTGAACTCTaGGAAGCGGGGAGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPNTPSPEEGPSRACSQVDTAEL*EAGSTA Trigger: GGCTGTGCTCCCCGCTTCCAAGAGTTCAGCCGTGTC...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS TCA 90 bp | GTTGGTCCTCGTGCAGTTCAAAACGGAAGGCAGCAACTCTGCGGCTaGTGTCGCGGTGTGGTGTGGCCTGCAGGAAAAGGGCTCGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPRAVQNGRQQLCG*CRGVVWPAGKGLGA Trigger: AGCGCCGAGCCCTTTTCCTGCAGGCCACACCACACCGCGACATCAGCCGCAGAGTTGCTGCCTTCCGTTTTGAACTGCACGAGGACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 90 bp | CACCAAAATCACTGGTGCATGCAGCCAGGAGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCATCCACACCAAGACCTTGAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQNHWCMQPGGARHH*RACRHHPHQDLEPG Trigger: CCCAGGCTCAAGGTCTTGGTGTGGATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCCTCCTGGCTGCATGCACCAGTGATTTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 90 bp | GCCAGTAGCAACTCTAGATTGCCGGTCATACGTTCAGCGAAGACCTaGGCACCAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSNSRLPVIRSAKT*APAKGRSGRRQTML Trigger: CAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTTGCTACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 90 bp | ATGGGCGACCCCATGGATGGTCCCGTGGATCACTACGAGGAGACATaGTGGCCAGTGGTGGGCACGTGGGAATGTGAGGCAGACCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: MGDPMDGPVDHYEET*WPVVGTWECEADPK Trigger: CTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGGGTCGCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 90 bp | GATTCTTGCAGCTCTGTGTCATGGGCGACCCCATGGATGGTCCCGTaGATCACTACGAGGAGACATGGTGGCCAGTGGTGGGCACGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSCSSVSWATPWMVP*ITTRRHGGQWWARG Trigger: CCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS GCA 90 bp | TCACAAAATCACTGGTGCATGCAGCCAGGAGGAGCTCGGCATCACTaGAGGGCCTGCAGGCACCATCCACACCAAGACCTTGAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQNHWCMQPGGARHH*RACRHHPHQDLEPG Trigger: CCCAGGCTCAAGGTCTTGGTGTGGATGGTGCCTGCAGGCCCTGCAGTGATGCCGAGCTCCTCCTGGCTGCATGCACCAGTGATTTTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 |
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| CDS CCA 90 bp | TGGATGGTCCCGTGGATCACTACGAGGAGACATGGTGGCCAGTGGTaGGCACGTGGGAATGTGAGGCAGACCCTAAGCTCTCCCGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: WMVPWITTRRHGGQW*ARGNVRQTLSSPAT Trigger: TGTTGCGGGAGAGCTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 90 bp | CCCGTGGATCACTACGAGGAGACATGGTGGCCAGTGGTGGGCACGTaGGAATGTGAGGCAGACCCTAAGCTCTCCCGCAACAGAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: PVDHYEETWWPVVGT*ECEADPKLSRNRNT Trigger: AGTGTTTCTGTTGCGGGAGAGCTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTCGCCATCTCACATGGGTaGAGATGGGTCGTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPNTPSPEEGPSRACSQVAISHG*RWVVRA Trigger: TGCTCTCACGACCCATCTCAACCCATGTGAGATGGC...GACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGTACCAGGATGCCATCCGAGCCACACCCTTCTCACCCACCCTCCCATCAGCCATCTCACATGGGTaGAGATGGGTCGTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGYQDAIRATPFSPTLPSAISHG*RWVVRA Trigger: TGCTCTCACGACCCATCTCAACCCATGTGAGATGGC...TGATGGGAGGGTGGGTGAGAAGGGTGTGGCTCGGATGGCATCCTGGTACCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 90 bp | GTCTGGCGGATGACACGAGCAACCACCACAGTGATGACTGATTCTTaGAGCTCTGTGTCATGGGCGACCCCATGGATGGTCCCGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VWRMTRATTTVMTDS*SSVSWATPWMVPWI Trigger: GATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATCAGTCATCACTGTGGTGGTTGCTCGTGTCATCCGCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | CCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCAGGTATCCACACCAAGACCTaGAGCCTGGGGAGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPQHPISRRRSIQGLLPGIHTKT*SLGRHF Trigger: GAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGAT...ACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | CCCATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCATCCACACCAAGACCTaGAGCCTGGGGAGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PITLPNTPSPEEGPSRACIHTKT*SLGRHF Trigger: GAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGAT...GCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | TCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCCATCCACACCAAGACCTaGAGCCTGGGGAGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSPTPHLQKKVHPGLAPIHTKT*SLGRHF Trigger: GAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGAT...GGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS-3UTR CAA 90 bp | ATCACCCTCCCCAACACCCCATCTCCAGAAGAAGGTCCATCCAGGGCTTGCTCCGCCATCTCACATGGGTaGAGATGGGTCGTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITLPNTPSPEEGPSRACSAISHG*RWVVRA Trigger: TGCTCTCACGACCCATCTCAACCCATGTGAGATGGC...GGAGCAAGCCCTGGATGGACCTTCTTCTGGAGATGGGGTGTTGGGGAGGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165838.9 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS CCA 90 bp | ACAGTGATGACTGATTCTTGCAGCTCTGTGTCATGGGCGACCCCATaGATGGTCCCGTGGATCACTACGAGGAGACATGGTGGCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVMTDSCSSVSWATP*MVPWITTRRHGGQW Trigger: CCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATCAGTCATCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS GCA 90 bp | GCAGGCACCATCCACACCAAGACCTTGAGCCTGGGGAGACATTTCTaGACGTTGGTCCTCGTGCAGTTCAAAACGGAAGGCAGCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTIHTKTLSLGRHF*TLVLVQFKTEGSNS Trigger: AGAGTTGCTGCCTTCCGTTTTGAACTGCACGAGGACCAACGTGCAGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGATGGTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS CCA 90 bp | ACAGTGATGACTGATTCTTGCAGCTCTGTGTCATGGGCGACCCCATaGATGGTCCCGTGGATCACAAAATCACTGGTGCATGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVMTDSCSSVSWATP*MVPWITKSLVHAAR Trigger: CCTGGCTGCATGCACCAGTGATTTTGTGATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCTGCAAGAATCAGTCATCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGTTATAAATATCCCAAAGAAGCCATTCCGGGGGCCTATGTAGGGTGTGACACGGCTGAACTCTaGGAAGCGGGGAGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGYKYPKEAIPGAYVGCDTAEL*EAGSTA Trigger: GGCTGTGCTCCCCGCTTCCAAGAGTTCAGCCGTGTC...ACACCCTACATAGGCCCCCGGAATGGCTTCTTTGGGATATTTATAACCAGATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| CDS-3UTR CAA 90 bp | TCGCAAGACAGCATGTATTCTGTGTACATGTATTCTGCAGAGAGGCTCTGCTCCATCCACACCAAGACCTaGAGCCTGGGGAGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQDSMYSVYMYSAERLCSIHTKT*SLGRHF Trigger: GAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGAT...GGAGCAGAGCCTCTCTGCAGAATACATGTACACAGAATACATGCTGTCTTGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165838.9 |
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| CDS GCA 72 bp | GCCGCTCTGGGCGCAGACAGACGATGCTGGGCCGTGTaGCCGGATCGGGGCCGCCCAGGGTCAGGCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: AALGADRRCWAV*PDRGRPGSGAA Trigger: CGCTGCGCCTGACCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 72 bp | CACCAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATaGTGGGCCGTGTGCCCGGATCGGGGCCGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HQRRAALGADRR*WAVCPDRGRPG Trigger: CCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 72 bp | CAGCGAAGGGCCGCTCTGGGCGCAGACAGACGATGCTaGGCCGTGTGCCCGGATCGGGGCCGCCCAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRRAALGADRRC*AVCPDRGRPGS Trigger: TGACCCTGGGCGGCCCCGATCCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 72 bp | ATCGGGGCCGCCCAGGGTCAGGCGCAGCGCCCCAGCTaGGTACAGCCACTCGATAGCGCCCTCAGTACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IGAAQGQAQRPS*VQPLDSALSTV Trigger: GACTGTACTGAGGGCGCTATCGAGTGGCTGTACCCAGCTGGGGCGCTGCGCCTGACCCTGGGCGGCCCCGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 72 bp | TTCAGCGAAGACCTGGGCACCAGCGAAGGGCCGCTCTaGGCGCAGACAGACGATGCTGGGCCGTGTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: FSEDLGTSEGPL*AQTDDAGPCAR Trigger: CCGGGCACACGGCCCAGCATCGTCTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 72 bp | TGCCAGGCTCCTGGGTCAAACCGCTGCCCCTCCAGCTaGAGCGGTCTTCCGAGTAGCCAGCGTGAGCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: CQAPGSNRCPSS*SGLPSSQRERT Trigger: CGTCCGCTCACGCTGGCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGCGGTTTGACCCAGGAGCCTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 |
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| CDS GCA 72 bp | CTGATGTCGCGGTGTGGTGTGGCCTGCCCCTCCAGCTaGAGCGGTCTTCCGAGTAGCCAGCGTGAGCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LMSRCGVACPSS*SGLPSSQRERT Trigger: CGTCCGCTCACGCTGGCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGGCCACACCACACCGCGACATCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
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| CDS CCA 72 bp | GCTGCCCCACGCTGCCAGGCTCCTGGGTCAAACCGCTaGGGACAGGACGGTGGTTCTCAGGTGGGTGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAPRCQAPGSNR*GQDGGSQVGDP Trigger: AGGGTCACCCACCTGAGAACCACCGTCCTGTCCCCAGCGGTTTGACCCAGGAGCCTGGCAGCGTGGGGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236963.2 |
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| CDS CAA 90 bp | CGGCCCCCAGCCAGGTCCGGGCCCTCGGCCAGTAGCAACTCTAGATaGCCGGTCATACGTTCAGCGAAGACCTGGGCACCAGCGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPARSGPSASSNSR*PVIRSAKTWAPAKG Trigger: GCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTTGCTACTGGCCGAGGGCCCGGACCTGGCTGGGGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 72 bp | GCAACTCTGCGGCTGATGTCGCGGTGTGGTGTGGCCTaGCCCTCCAGCTGCAGCGGTCTTCCGAGTAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATLRLMSRCGVA*PSSCSGLPSSQ Trigger: CTGGCTACTCGGAAGACCGCTGCAGCTGGAGGGGCAGGCCACACCACACCGCGACATCAGCCGCAGAGTTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
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| CDS CCA 72 bp | ACGGAAGGCAGCAACTCTGCGGCTGATGTCGCGGTGTaGTGTGGCCTGCAGGAAAAGGGCTCGGCGCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TEGSNSAADVAV*CGLQEKGSALA Trigger: CGCGAGCGCCGAGCCCTTTTCCTGCAGGCCACACCACACCGCGACATCAGCCGCAGAGTTGCTGCCTTCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS GCA 72 bp | CACTCGATAGCGCCCTCAGTACAGTCCAGGGTCAGCTaGCCCACGCTGCCAGGCTCCTGGGTCAAACCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSIAPSVQSRVS*PTLPGSWVKPL Trigger: CAGCGGTTTGACCCAGGAGCCTGGCAGCGTGGGGCAGCTGACCCTGGACTGTACTGAGGGCGCTATCGAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS TCA 72 bp | CGTGCAGTTCAAAACGGAAGGCAGCAACTCTGCGGCTaGTGTCGCGGTGTGGTGTGGCCTGCCCCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAVQNGRQQLCG*CRGVVWPAPPA Trigger: AGCTGGAGGGGCAGGCCACACCACACCGCGACATCAGCCGCAGAGTTGCTGCCTTCCGTTTTGAACTGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235925.2 ENSMUST00000238040.2 |
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| CDS TCA 72 bp | AAACCGCTGGGGACAGGACGGTGGTTCTCAGGTGGGTaGCCCTCGTTCCCTAGCCCGCTCATCCCTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KPLGTGRWFSGG*PSFPSPLIPFP Trigger: GGGAAAAGGGATGAGCGGGCTAGGGAACGAGGGTCACCCACCTGAGAACCACCGTCCTGTCCCCAGCGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236963.2 |
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| CDS GCA 72 bp | CCAGGTCCGGGCCCTCGGCCAGTAGCAACTCTAGATTaGCGGTCATACGTTCAGCGAAGACCTGGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGPGPRPVATLD*RSYVQRRPGHQ Trigger: CTGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTTGCTACTGGCCGAGGGCCCGGACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CAA 72 bp | GCCAGGTCCGGGCCCTCGGCCAGTAGCAACTCTAGATaGCCGGTCATACGTTCAGCGAAGACCTGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ARSGPSASSNSR*PVIRSAKTWAP Trigger: TGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTTGCTACTGGCCGAGGGCCCGGACCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS TCA 72 bp | CTGCAGGGCCTGCAGGCACCATCCACACCAAGACCTTaGGCCTGGGGAGACATTTCTGCACGTTGGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LQGLQAPSTPRP*AWGDISARWSS Trigger: CGAGGACCAACGTGCAGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGATGGTGCCTGCAGGCCCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS CCA 72 bp | AACTCTAGATTGCCGGTCATACGTTCAGCGAAGACCTaGGCACCAGCGAAGGGCCGCTCTGGGCGCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: NSRLPVIRSAKT*APAKGRSGRRQ Trigger: CTGTCTGCGCCCAGAGCGGCCCTTCGCTGGTGCCCAGGTCTTCGCTGAACGTATGACCGGCAATCTAGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 72 bp | CACTACGAGGAGACATGGTGGCCAGTGGTGGGCACGTaGGAATGTGAGGCAGACCCTAAGCTCTCCCGCAAC | + |
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Preference number: 6 (lower is better) Translates to: HYEETWWPVVGT*ECEADPKLSRN Trigger: GTTGCGGGAGAGCTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 72 bp | CCCATGGATGGTCCCGTGGATCACTACGAGGAGACATaGTGGCCAGTGGTGGGCACGTGGGAATGTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PMDGPVDHYEET*WPVVGTWECEA Trigger: TGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 72 bp | AGCTCTGTGTCATGGGCGACCCCATGGATGGTCCCGTaGATCACTACGAGGAGACATGGTGGCCAGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSVSWATPWMVP*ITTRRHGGQWW Trigger: CCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 72 bp | CGACCCCATGGATGGTCCCGTGGATCACAAAATCACTaGTGCATGCAGCCAGGAGGAGCTCGGCATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: RPHGWSRGSQNH*CMQPGGARHHC Trigger: GCAGTGATGCCGAGCTCCTCCTGGCTGCATGCACCAGTGATTTTGTGATCCACGGGACCATCCATGGGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CCA 72 bp | CCGTGGATCACTACGAGGAGACATGGTGGCCAGTGGTaGGCACGTGGGAATGTGAGGCAGACCCTAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PWITTRRHGGQW*ARGNVRQTLSS Trigger: AGAGCTTAGGGTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 72 bp | ATGGATGGTCCCGTGGATCACTACGAGGAGACATGGTaGCCAGTGGTGGGCACGTGGGAATGTGAGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: MDGPVDHYEETW*PVVGTWECEAD Trigger: GTCTGCCTCACATTCCCACGTGCCCACCACTGGCCACCATGTCTCCTCGTAGTGATCCACGGGACCATCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CCA 72 bp | AGCTCTGTGTCATGGGCGACCCCATGGATGGTCCCGTaGATCACAAAATCACTGGTGCATGCAGCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSVSWATPWMVP*ITKSLVHAARR Trigger: CCTCCTGGCTGCATGCACCAGTGATTTTGTGATCCACGGGACCATCCATGGGGTCGCCCATGACACAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000236963.2 |
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| CDS CAA 90 bp | ACCATCCACACCAAGACCTTGAGCCTGGGGAGACATTTCTGCACGTaGGTCCTCGTGCAGTTCAAAACGGAAGGCAGCAACTCTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: TIHTKTLSLGRHFCT*VLVQFKTEGSNSAA Trigger: AGCCGCAGAGTTGCTGCCTTCCGTTTTGAACTGCACGAGGACCAACGTGCAGAAATGTCTCCCCAGGCTCAAGGTCTTGGTGTGGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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| CDS CCA 72 bp | AAGCTCTCCCGCAACAGAAACACTCACCAAAATCACTaGTGCATGCAGCCAGGAGGAGCTCGGCATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: KLSRNRNTHQNH*CMQPGGARHHC Trigger: GCAGTGATGCCGAGCTCCTCCTGGCTGCATGCACCAGTGATTTTGGTGAGTGTTTCTGTTGCGGGAGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238040.2 |
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| CDS CAA 72 bp | ACCAAGACCTTGAGCCTGGGGAGACATTTCTGCACGTaGGTCCTCGTGCAGTTCAAAACGGAAGGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TKTLSLGRHFCT*VLVQFKTEGSN Trigger: GTTGCTGCCTTCCGTTTTGAACTGCACGAGGACCAACGTGCAGAAATGTCTCCCCAGGCTCAAGGTCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000002344.7 ENSMUST00000165838.9 ENSMUST00000235925.2 ENSMUST00000236963.2 ENSMUST00000238040.2 |
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