Pregenerated sensors for METAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036112Ensembl transcript IDs: ENSMUST00000047910.15, ENSMUST00000180375.8, ENSMUST00000180392.8, ENSMUST00000180688.2, ENSMUST00000180840.8, ENSMUST00000181091.8, ENSMUST00000181217.8, ENSMUST00000181470.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTaGTGCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: RCVLKKAFQVLWMEL*CCHGHGHGHRHPTC Trigger: GCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 90 bp | CTGCTCAAAAACCAAGACCATGAATGCAGAACCCAAGGAGGCAGCTaGAGGGCCTGTGAGTGTGTGAGTTCACGTGGAGCCCCTCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LLKNQDHECRTQGGS*RACECVSSRGAPQH Trigger: GTGCTGAGGGGCTCCACGTGAACTCACACACTCACAGGCCCTCCAGCTGCCTCCTTGGGTTCTGCATTCATGGTCTTGGTTTTTGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR GCA 90 bp | TGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTaGTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CVLKKAFQVLWMELC*CHGHGHGHRHPTCS Trigger: TGAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 90 bp | AGAGATTCCTTTCGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATaGATGGAGCTCTGCTGCTGCCATGGCCATGGCCATGGCCACCGC | + |
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Preference number: 1 (lower is better) Translates to: RDSFRCVLKKAFQVL*MELCCCHGHGHGHR Trigger: GCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCGAAAGGAATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 90 bp | TCCTTGAGTAACCTGATGCTGGGATCTCTAACTTACTGGAGGCCGTaGTGTTCAGTGCTTGGCTCAGGAAGGAAAAAGCCCAATCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SLSNLMLGSLTYWRP*CSVLGSGRKKPNPK Trigger: CTTGGGATTGGGCTTTTTCCTTCCTGAGCCAAGCACTGAACATCACGGCCTCCAGTAAGTTAGAGATCCCAGCATCAGGTTACTCAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 90 bp | GATGCTGGGATCTCTAACTTACTGGAGGCCGTGATGTTCAGTGCTTaGCTCAGGAAGGAAAAAGCCCAATCCCAAGATAATTGTTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: DAGISNLLEAVMFSA*LRKEKAQSQDNCSN Trigger: ATTAGAACAATTATCTTGGGATTGGGCTTTTTCCTTCCTGAGCCAAGCACTGAACATCACGGCCTCCAGTAAGTTAGAGATCCCAGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 90 bp | CCTAAAGTCGAATGTGTCTTTATGTTCAAATTAACACACAGTTTATaGAAGGTCTCGAACCTCATCTCCTTGAGTAACCTGATGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PKVECVFMFKLTHSL*KVSNLISLSNLMLG Trigger: TCCCAGCATCAGGTTACTCAAGGAGATGAGGTTCGAGACCTTTCATAAACTGTGTGTTAATTTGAACATAAAGACACATTCGACTTTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR GCA 90 bp | AACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTaGCAAAAATACAGCTGGAGTAATATTTGGAGTGATATTAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: NKPQQKHINRRQNPM*QKYSWSNIWSDIRS Trigger: TGACCTAATATCACTCCAAATATTACTCCAGCTGTATTTTTGGCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 90 bp | CAAATTAAGGCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATaGACCATTTCTAGCAAATCATACAAAGATTTTAAGCAGCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: QIKALPGQGTNLELR*TISSKSYKDFKQLN Trigger: ATTTAGCTGCTTAAAATCTTTGTATGATTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGCCTTAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCAGAAATGGGGCATACTCCTTTCTGCCTaGTTCACACACATGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AAMAMAMATATQPAQKWGILLSA*FTHMKS Trigger: GCTCTTCATGTGTGTGAAGCAGGCAGAAAGGAGTAT...GCCCCATTTCTGAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCACACCGCCACCCAACCTaGTCAGAAATGGGGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LCSKESFPGLMDGALLLPHRHPT*SEMGLH Trigger: GTGGAGCCCCATTTCTGAGCAGGTTGGGTGGCGGTG...TGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGATTCCTTTCGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGCTCTGCTGCTGCCATaGCCATGGCCATGGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: KRDSFRCVLKKAFQVLWMALLLP*PWPWPP Trigger: CGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGC...CATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCGAAAGGAATCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCATTTAGCACAGACTTCTaGAAGGAGTGTCGCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LCSKESFPGLMDGALLLPFSTDF*KECRLG Trigger: CCCCAGGCGACACTCCTTTCAGAAGTCTGTGCTAAA...TGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGATTCCTTTCGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGACCCAAGGAGGCAGCTaGAGGGCCTGTGAGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KRDSFRCVLKKAFQVLWMTQGGS*RACECV Trigger: CACACACTCACAGGCCCTCCAGCTGCCTCCTTGGGT...CATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCGAAAGGAATCTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCAGTGATGTTCAGTGCTTaGCTCAGGAAGGAAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LCSKESFPGLMDGALLLPVMFSA*LRKEKA Trigger: GGCTTTTTCCTTCCTGAGCCAAGCACTGAACATCAC...TGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCGTGTGTGAGTTCACGTaGAGCCCCTCAGCACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LINKPQQKHINRRQNPMCVCEFT*SPSAPG Trigger: TCCTGGTGCTGAGGGGCTCCACGTGAACTCACACAC...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTGGCCGTGATGTTCAGTaGTTGGCTCAGGAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GQLINKPQQKHINRRQNPGRDVQ*LAQEGK Trigger: TTTTCCTTCCTGAGCCAAGCACTGAACATCACGGCC...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCACTTCAAGCAGCCCGTaGTCCAGGGCCCTAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LINKPQQKHINRRQNPMCTSSSP*SRALSL Trigger: TAGACTTAGGGCCCTGGACCACGGGCTGCTTGAAGT...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATGGACCATTTCTAGCAAAGTAAATATGAACCCTTaGGGGACATTTACTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALPGQGTNLELRWTISSKVNMNP*GTFTTA Trigger: TGCTGTAGTAAATGTCCCTCAAGGGTTCATATTTAC...TTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTCCAACAGTAGTACTCTaGGATAAGTTTGGACCTTAC | + |
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Preference number: 2 (lower is better) Translates to: GQLINKPQQKHINRRQNPPTVVL*DKFGPY Trigger: GTAAGGTCCAAACTTATCTCAGAGTACTACTGTTGG...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGCAAAAACCAAGACCATaGATGCAGAACCCAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLPKESDLIYSLYLSQEEQKPRP*MQNPRR Trigger: CCTCCTTGGGTTCTGCATTCATGGTCTTGGTTTTTG...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGGGCCCTAAGTCTACCTTTCCTTCAGAGACAATGTCAAGCAAAATAAAAACTTTTGCCTCTTTCTaGTTAGAATTACAACCATAC | + |
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Preference number: 2 (lower is better) Translates to: VQGPKSTFPSETMSSKIKTFASF*LELQPY Trigger: GTATGGTTGTAATTCTAAGCAGAAAGAGGCAAAAGT...TTTTATTTTGCTTGACATTGTCTCTGAAGGAAAGGTAGACTTAGGGCCCTGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCAACTATACTCCTTTCTaGCTGCTTCACACACATGAA | + |
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Preference number: 2 (lower is better) Translates to: LINKPQQKHINRRQNPMCNYTPF*LLHTHE Trigger: TTCATGTGTGTGAAGCAGGCAGAAAGGAGTATAGTT...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR GCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCTACAAAGAGGGAGACTaGAGGAAAGGTCTTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LINKPQQKHINRRQNPMCYKEGD*RKGLRK Trigger: TTTTCTAAGACCTTTCCTGCAGTCTCCCTCTTTGTA...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGAGCTGGAGTAATATTTaGAGTGATATTAGGTCACTT | + |
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Preference number: 2 (lower is better) Translates to: LLPKESDLIYSLYLSQEESWSNI*SDIRSL Trigger: AAGTGACCTAATATCACTCCAAATATTACTCCAGCT...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTCTGCTGCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCCGTGATGTTCAGTGCTaGGCTCAGGAAGGAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GALLLPWPWPWPPPPNLLRDVQC*AQEGKS Trigger: GCTTTTTCCTTCCTGAGCCAAGCACTGAACATCACG...GAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 72 bp | GAACCCAAGGAGGCAGCTGGAGGGCCTGTGAGTGTGTaGGTTCACGTGGAGCCCCTCAGCACCAGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: EPKEAAGGPVSV*VHVEPLSTRKT Trigger: TGTCTTCCTGGTGCTGAGGGGCTCCACGTGAACTCACACACTCACAGGCCCTCCAGCTGCCTCCTTGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | ATGGCCATGGCCACCGCCACCCAACCTGCTCAGAAATaGGGCTCCACCAACCCACAGATCCCAAGGAACCTG | + |
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Preference number: 3 (lower is better) Translates to: MAMATATQPAQK*GSTNPQIPRNL Trigger: CAGGTTCCTTGGGATCTGTGGGTTGGTGGAGCCCCATTTCTGAGCAGGTTGGGTGGCGGTGGCCATGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | TTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCATaGCCATGGCCATGGCCACCGCCACCCAACCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: FPGLMDGALLLP*PWPWPPPPNLL Trigger: GAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR GCA 72 bp | AAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTaGTGCCATGGCCATGGCCATGGCCACCGCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: KKAFQVLWMELC*CHGHGHGHRHP Trigger: TGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR GCA 72 bp | CTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTaGTGCTGCCATGGCCATGGCCATGGCCACCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LKKAFQVLWMEL*CCHGHGHGHRH Trigger: GTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | AACCAAGACCATGAATGCAGAACCCAAGGAGGCAGCTaGAGGGCCTGTGAGTGTGTGAGTTCACGTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: NQDHECRTQGGS*RACECVSSRGA Trigger: GGCTCCACGTGAACTCACACACTCACAGGCCCTCCAGCTGCCTCCTTGGGTTCTGCATTCATGGTCTTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 72 bp | GGGCTTAGAGGTCAAGCTGCTCAAAAACCAAGACCATaGATGCAGAACCCAAGGAGGCAGCTGGAGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GLRGQAAQKPRP*MQNPRRQLEGL Trigger: CAGGCCCTCCAGCTGCCTCCTTGGGTTCTGCATTCATGGTCTTGGTTTTTGAGCAGCTTGACCTCTAAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 72 bp | AACCTGATGCTGGGATCTCTAACTTACTGGAGGCCGTaGTGTTCAGTGCTTGGCTCAGGAAGGAAAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: NLMLGSLTYWRP*CSVLGSGRKKP Trigger: GGGCTTTTTCCTTCCTGAGCCAAGCACTGAACATCACGGCCTCCAGTAAGTTAGAGATCCCAGCATCAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | TTTCGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATaGATGGAGCTCTGCTGCTGCCATGGCCATGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: FRCVLKKAFQVL*MELCCCHGHGH Trigger: ATGGCCATGGCCATGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 72 bp | CCTCAACTATACTCCTTTCTGCCTGCTTCACACACATaGAGAGCTTGTAGCCACCATGAAGAGAATCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: PQLYSFLPASHT*RACSHHEENLR Trigger: CCTCAGATTCTCTTCATGGTGGCTACAAGCTCTTCATGTGTGTGAAGCAGGCAGAAAGGAGTATAGTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCATGGCTTTGTGTTGTTTaGGCTTTCCTTTATAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LCSKESFPGLMDGALLLPWLCVV*AFLYKA Trigger: GGCCTTATAAAGGAAAGCCAAAACAACACAAAGCCA...TGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | ATCTCTAACTTACTGGAGGCCGTGATGTTCAGTGCTTaGCTCAGGAAGGAAAAAGCCCAATCCCAAGATAAT | + |
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Preference number: 3 (lower is better) Translates to: ISNLLEAVMFSA*LRKEKAQSQDN Trigger: ATTATCTTGGGATTGGGCTTTTTCCTTCCTGAGCCAAGCACTGAACATCACGGCCTCCAGTAAGTTAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR TCA 72 bp | TCTAAGCCAGGAAGAGTTATCTTTAGCACAGACTTCTaGAAGGAGTGTCGCCTGGGGCAGCTTATTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: SKPGRVIFSTDF*KECRLGQLINK Trigger: TTTGTTAATAAGCTGCCCCAGGCGACACTCCTTTCAGAAGTCTGTGCTAAAGATAACTCTTCCTGGCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | TTTAAGGCAGAGAGAAGACAGTTCGAGCATGGCACCTaGGCTGTTACATCTAAGATCTTGTTTTTCTCGAAG | + |
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Preference number: 3 (lower is better) Translates to: FKAERRQFEHGT*AVTSKILFFSK Trigger: CTTCGAGAAAAACAAGATCTTAGATGTAACAGCCCAGGTGCCATGCTCGAACTGTCTTCTCTCTGCCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTGCACACAGCAGACTGTaGTACTTCCCACTAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: GQLINKPQQKHINRRQNPAHSRL*YFPLDF Trigger: AAAATCTAGTGGGAAGTACAACAGTCTGCTGTGTGC...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR CCA 72 bp | TTATCTTTAGCACAGACTTCTGAAAGGAGTGTCGCCTaGGGCAGCTTATTAACAAACCGCAACAAAAACACA | + |
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Preference number: 3 (lower is better) Translates to: LSLAQTSERSVA*GSLLTNRNKNT Trigger: TGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCCCAGGCGACACTCCTTTCAGAAGTCTGTGCTAAAGATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | AAGAGAGATTCCTTTCGCTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGTGTTGGTTTTGGCTTaGTGTTGTTTTGGCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KRDSFRCVLKKAFQVLWMVLVLA*CCFGFP Trigger: AGGAAAGCCAAAACAACACAAAGCCAAAACCAACAC...CATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAGCGAAAGGAATCTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGGGGCAAGGGACGAATTaGGAACTAAGATGGACCATT | + |
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Preference number: 3 (lower is better) Translates to: LLPKESDLIYSLYLSQEEGQGTN*ELRWTI Trigger: AATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCC...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR-3UTR CAA 90 bp | GCTGTACTACAGAAACCAAATAACTCACTGATAAGACTGAAGACCCTGACATTTAGGCTTGCTATATTCTaGCCTCAGAAGAAATGCTCA | + |
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Preference number: 3 (lower is better) Translates to: AVLQKPNNSLIRLKTLTFRLAIF*PQKKCS Trigger: TGAGCATTTCTTCTGAGGCAAGAATATAGCAAGCCT...AAATGTCAGGGTCTTCAGTCTTATCAGTGAGTTATTTGGTTTCTGTAGTACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
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| 3UTR-3UTR CAA 90 bp | GCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCCAAAAATACAGCTGAGATTGAAACTTCTTTaGCTTGTGGCTTTACTGTTG | + |
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Preference number: 3 (lower is better) Translates to: ATKTHQPKTESYVPKIQLRLKLL*LVALLL Trigger: CAACAGTAAAGCCACAAGCAAAAGAAGTTTCAATCT...CAGCTGTATTTTTGGCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| 3UTR GCA 72 bp | TTACAAATATGCCACCTGATAGGCTTGCTATATTCTTaGCTCAGAAGAAATGCTCATGAGTTATCAAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LQICHLIGLLYS*LRRNAHELSSL Trigger: GAGACTTGATAACTCATGAGCATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAGGTGGCATATTTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
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| 3UTR CCA 72 bp | GCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATaGACCATTTCTAGCAAATCATACAAAGATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPGQGTNLELR*TISSKSYKDFK Trigger: CTTAAAATCTTTGTATGATTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| 3UTR CCA 72 bp | AACCGAAGACAGAATCCTATGTGCCAAAAATACAGCTaGAGTAATATTTGGAGTGATATTAGGTCACTTACC | + |
|
Preference number: 3 (lower is better) Translates to: NRRQNPMCQKYS*SNIWSDIRSLT Trigger: GGTAAGTGACCTAATATCACTCCAAATATTACTCCAGCTGTATTTTTGGCACATAGGATTCTGTCTTCGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| 3UTR CCA 72 bp | AATCCTATGTGCCAAAAATACAGCTGGAGTAATATTTaGAGTGATATTAGGTCACTTACCCAAAGCGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: NPMCQKYSWSNI*SDIRSLTQSVY Trigger: GTATACGCTTTGGGTAAGTGACCTAATATCACTCCAAATATTACTCCAGCTGTATTTTTGGCACATAGGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGTTACATGTAGACAGTTaGCCTTTGATCAAACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPKESDLIYSLYLSQEELHVDS*PLIKLL Trigger: AAGGAGTTTGATCAAAGGCAAACTGTCTACATGTAA...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGGGTTTTGGCTTTGTGTaGTTTTGGCTTTCCTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LLPKESDLIYSLYLSQEEGFGFV*FWLSFI Trigger: TATAAAGGAAAGCCAAAACAACACAAAGCCAAAACC...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | GCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCAGAAATGGGGCCTCTTCCCTGTCGTCTaGATCCAGGTCGCCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAMAMAMATATQPAQKWGLFPVV*IQVAIQ Trigger: CTGAATGGCGACCTGGATCCAGACGACAGGGAAGAG...GCCCCATTTCTGAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCTGCTGCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCGAGGGAGGGTCTGTTTaGACTTTTGGTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALLLPWPWPWPPPPNLLEGGSV*TFGPLF Trigger: GAAGAGAGGACCAAAAGTTCAAACAGACCCTCCCTC...GAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCTGCTGCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCGCTCTCCAGCTGTTTTaGTACTTCATCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GALLLPWPWPWPPPPNLLALQLF*YFIHQG Trigger: GCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGC...GAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | TCATGTAGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCCTAACTTGCCGATGTaGCTCCGCAGCTTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCSVNIPCRHEPRPSPCSPNLPM*LRSFSE Trigger: TTCCGAGAAGCTGCGGAGGCACATCGGCAAGTTAGG...GGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACTACATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAAGGTCCAGATCTCCTCACTaGCCTGGTCTAGGGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVNIPCRHEPRPSPCSQRSRSPH*PGLGPF Trigger: AAAAGGCCCTAGACCAGGCCAGTGAGGAGATCTGGA...CCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAAGGGATTCCATAACTTCTTaGATGGCCTCACCGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: SVNIPCRHEPRPSPCSQRDSITS*MASPTS Trigger: CGATGTCGGTGAGGCCATTCAAGAAGTTATGGAATC...CCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAAGGCAGATGTCATCATACTaGAAGACTGTCGTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVNIPCRHEPRPSPCSQRQMSSY*KTVVSP Trigger: TGGTGACACGACAGTCTTGCAGTATGATGACATCTG...CCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCAGGTCGCCATTCAGGTaGCCCCCGAAGGACGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LINKPQQKHINRRQNPMCRSPFR*PPKDAA Trigger: GGCAGCGTCCTTCGGGGGCCACCTGAATGGCGACCT...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCAGGTCGCCATTCAGGTaGCCCCCGAAGGACGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVRSPFR*PPKDAA Trigger: GGCAGCGTCCTTCGGGGGCCACCTGAATGGCGACCT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGCCCTAAGTCTACCTTTCCTTCAGAGACAATGTCAAGCAAAATAAAATCCGTCTTTTCTTCTTaGCGGCTTCCTCGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQGPKSTFPSETMSSKIKSVFSS*RLPRPC Trigger: GCACGGCCGAGGAAGCCGCCAAGAAGAAAAGACGGA...TTTTATTTTGCTTGACATTGTCTCTGAAGGAAAGGTAGACTTAGGGCCCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAACACCTCTCCTTCCTTaGTATGTCTTCCCATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: CSVNIPCRHEPRPSPCSQTPLLP*YVFPSI Trigger: AATAGATGGGAAGACATACCAAGGAAGGAGAGGTGT...TTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCAAGACCATGAATGCAGAACCCAAGGAGGCAGCTGGAGGGCCTGTGAGATTTTTCATGTAGTGTaGACATTCCATGTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KNQDHECRTQGGSWRACEIFHVV*TFHVVM Trigger: CATGACGACATGGAATGTTCACACTACATGAAAAAT...CTCACAGGCCCTCCAGCTGCCTCCTTGGGTTCTGCATTCATGGTCTTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTCTCCTTCTCCTCCAGTaGTTGGCTCTCCAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLINKPQQKHINRRQNPLLLLQ*LALQLF Trigger: AAACAGCTGGAGAGCCAAGCACTGGAGGAGAAGGAG...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| 3UTR CAA 72 bp | TTCGAGCATGGCACCTGGGCTGTTACATCTAAGATCTaGTTTTTCTCGAAGTACCCTAAGCCTGACTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FEHGTWAVTSKI*FFSKYPKPDSC Trigger: GCAAGAGTCAGGCTTAGGGTACTTCGAGAAAAACAAGATCTTAGATGTAACAGCCCAGGTGCCATGCTCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | GCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATGGACCATTTCTAGCAAACTTCTTCTTCCCAGTTaGACCATCAGCATCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: ALPGQGTNLELRWTISSKLLLPS*TISITI Trigger: GATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAG...TTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCCCTAACTTGCCGATGTaGCTCCGCAGCTTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LINKPQQKHINRRQNPMCPNLPM*LRSFSE Trigger: TTCCGAGAAGCTGCGGAGGCACATCGGCAAGTTAGG...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCCTAACTTGCCGATGTaGCTCCGCAGCTTCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVPNLPM*LRSFSE Trigger: TTCCGAGAAGCTGCGGAGGCACATCGGCAAGTTAGG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCTCTTCCCTGTCGTCTaGATCCAGGTCGCCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVLFPVV*IQVAIQ Trigger: CTGAATGGCGACCTGGATCCAGACGACAGGGAAGAG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| 3UTR CAA 72 bp | GCAAACAACAAGTGTTGGTTTTGGCTTTGTGTTGTTTaGGCTTTCCTTTATAAGGCCATACTCCTTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANNKCWFWLCVV*AFLYKAILLPA Trigger: GGCCGGAAGGAGTATGGCCTTATAAAGGAAAGCCAAAACAACACAAAGCCAAAACCAACACTTGTTGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCTGACACAGCCCCTTTaGCCTTCTTCTTCTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVLTQPL*PSSSSV Trigger: GACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTCAGATGTCATCATACTaGAAGACTGTCGTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLINKPQQKHINRRQNPQMSSY*KTVVSP Trigger: TGGTGACACGACAGTCTTGCAGTATGATGACATCTG...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCTCCAGATCTCCTCACTaGCCTGGTCTAGGGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVSRSPH*PGLGPF Trigger: AAAAGGCCCTAGACCAGGCCAGTGAGGAGATCTGGA...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGACCCTGACATTTACAAATATGCCACCTGATAGGCTTGCTATATTCTTGTCCCAAAGGTCTCAATaGCATACACCTCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTLTFTNMPPDRLAIFLSQRSQ*HTPLLP Trigger: AGGAAGGAGAGGTGTATGCCATTGAGACCTTTGGGA...CAAGAATATAGCAAGCCTATCAGGTGGCATATTTGTAAATGTCAGGGTCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGGCCCTAAGTCTACCTTTCCTTCAGAGACAATGTCAAGCAAAATAAAAAATGTCACACAGTGGTaGGTATGGATCTACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQGPKSTFPSETMSSKIKNVTQW*VWIYNA Trigger: GGCATTGTAGATCCATACCCACCACTGTGTGACATT...TTTTATTTTGCTTGACATTGTCTCTGAAGGAAAGGTAGACTTAGGGCCCTGGAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGAGGGAGGGTCTGTTTaGACTTTTGGTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVEGGSV*TFGPLF Trigger: GAAGAGAGGACCAAAAGTTCAAACAGACCCTCCCTC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTACTACAGAAACCAAATAACTCACTGATAAGACTGAAGACCCTGACATTTGATTCCATAACTTCTTaGATGGCCTCACCGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: AVLQKPNNSLIRLKTLTFDSITS*MASPTS Trigger: CGATGTCGGTGAGGCCATTCAAGAAGTTATGGAATC...AAATGTCAGGGTCTTCAGTCTTATCAGTGAGTTATTTGGTTTCTGTAGTACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGCTGACACAGCCCCTTTaGCCTTCTTCTTCTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKESDLIYSLYLSQEELTQPL*PSSSSV Trigger: GACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAG...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGCTCTCCAGCTGTTTTaGTACTTCATCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVALQLF*YFIHQG Trigger: GCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGTCCAGATCTCCTCACTaGCCTGGTCTAGGGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPKESDLIYSLYLSQEESRSPH*PGLGPF Trigger: AAAAGGCCCTAGACCAGGCCAGTGAGGAGATCTGGA...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTCAAGTGTTTTGTTCTTaGAAGCCTTATTGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLINKPQQKHINRRQNPQVFCS*KPYWHV Trigger: CACGTGCCAATAAGGCTTCCAAGAACAAAACACTTG...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGATTCCATAACTTCTTaGATGGCCTCACCGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVDSITS*MASPTS Trigger: CGATGTCGGTGAGGCCATTCAAGAAGTTATGGAATC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR TCA 90 bp | GCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCCAAAAATACAGCTGACCGTTTTTCCAGCGTaGATTCTATATGGCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: ATKTHQPKTESYVPKIQLTVFPA*ILYGPI Trigger: AATTGGGCCATATAGAATTCACGCTGGAAAAACGGT...CAGCTGTATTTTTGGCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR TCA 90 bp | CACCTGATAGGCTTGCTATATTCTTGCCTCAGAAGAAATGCTCATGAGTTATCAACCGTTTTTCCAGCGTaGATTCTATATGGCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: HLIGLLYSCLRRNAHELSTVFPA*ILYGPI Trigger: AATTGGGCCATATAGAATTCACGCTGGAAAAACGGT...TGATAACTCATGAGCATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGAGGGAGGGTCTGTTTaGACTTTTGCTGTGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVEGGSV*TFAVRY Trigger: GTATCTCACAGCAAAAGTTCAAACAGACCCTCCCTC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181217.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVLLLPS*TISITI Trigger: GATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCTCCCAAAGGTCTCAATaGCATACACCTCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVSQRSQ*HTPLLP Trigger: AGGAAGGAGAGGTGTATGCCATTGAGACCTTTGGGA...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCAGATGTCATCATACTaGAAGACTGTCGTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVQMSSY*KTVVSP Trigger: TGGTGACACGACAGTCTTGCAGTATGATGACATCTG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATGGACCATTTCTAGCAAACATTTAAGTTACGTATaGGTTTCACTTGGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPGQGTNLELRWTISSKHLSYV*VSLGMS Trigger: AGACATACCAAGTGAAACCCATACGTAACTTAAATG...TTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGTCCCAAAGGTCTCAATaGCATACACCTCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPKESDLIYSLYLSQEESQRSQ*HTPLLP Trigger: AGGAAGGAGAGGTGTATGCCATTGAGACCTTTGGGA...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCAATGTCACACAGTGGTaGGTATGGATCTACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVNVTQW*VWIYNA Trigger: GGCATTGTAGATCCATACCCACCACTGTGTGACATT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| 3UTR CAA 72 bp | ACACAAATTAAGGCTTTACCTGGGCAAGGGACGAATTaGGAACTAAGATGGACCATTTCTAGCAAATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQIKALPGQGTN*ELRWTISSKSY Trigger: GTATGATTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGCCTTAATTTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCACCGTTTTTCCAGCGTaGATTCTATATGGCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVTVFPA*ILYGPI Trigger: AATTGGGCCATATAGAATTCACGCTGGAAAAACGGT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCAAGTGTTTTGTTCTTaGAAGCCTTATTGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVQVFCS*KPYWHV Trigger: CACGTGCCAATAAGGCTTCCAAGAACAAAACACTTG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCATTTTTCATGTAGTGTaGACATTCCATGTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVIFHVV*TFHVVM Trigger: CATGACGACATGGAATGTTCACACTACATGAAAAAT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR TCA 90 bp | CATTTACAAATATGCCACCTGATAGGCTTGCTATATTCTTGCCTCAGAAGAAATATTTTTCATGTAGTGTaGACATTCCATGTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLQICHLIGLLYSCLRRNIFHVV*TFHVVM Trigger: CATGACGACATGGAATGTTCACACTACATGAAAAAT...ATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAGGTGGCATATTTGTAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR CCA 90 bp | CTGATAGGCTTGCTATATTCTTGCCTCAGAAGAAATGCTCATGAGTTATCAAGTCATTTAAGTTACGTATaGGTTTCACTTGGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGLLYSCLRRNAHELSSHLSYV*VSLGMS Trigger: AGACATACCAAGTGAAACCCATACGTAACTTAAATG...ACTTGATAACTCATGAGCATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCCATTTAAGTTACGTATaGGTTTCACTTGGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFAFDQTPLNMNNGITQVHLSYV*VSLGMS Trigger: AGACATACCAAGTGAAACCCATACGTAACTTAAATG...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS CCA 90 bp | GGCGGCTTCCTCGGCCGTGCTGGAGGTTCCCTCTTCCCTGTCGTCTaGATCCAGGTCGCCATTCAGGTGGCCCCCGAAGGACGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGFLGRAGGSLFPVV*IQVAIQVAPEGRCL Trigger: CAGGCAGCGTCCTTCGGGGGCCACCTGAATGGCGACCTGGATCCAGACGACAGGGAAGAGGGAACCTCCAGCACGGCCGAGGAAGCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCTCTGCTGCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCCTTCTCCTCCAGTGCTaGGCTCTCCAGCTGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GALLLPWPWPWPPPPNLLLLLQC*ALQLFC Trigger: GCAAAACAGCTGGAGAGCCAAGCACTGGAGGAGAAG...GAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGCAGCAGAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | GCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCAGAAATGGGGCGCTGACACAGCCCCTTaGCCCTTCTTCTTCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AAMAMAMATATQPAQKWGADTAP*PFFFFR Trigger: ACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGC...GCCCCATTTCTGAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | GCTGCCATGGCCATGGCCATGGCCACCGCCACCCAACCTGCTCAGAAATGGGGCTCTTCTTCTTCCCAGTaGCACCATCAGCATCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAMAMAMATATQPAQKWGSSSSQ*HHQHHH Trigger: ATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGA...GCCCCATTTCTGAGCAGGTTGGGTGGCGGTGGCCATGGCCATGGCCATGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | AGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAAGGTGGGCAGCACAGTTGTaGAGAGAACACCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVNIPCRHEPRPSPCSQRWAAQL*REHPVG Trigger: CCCCACTGGGTGTTCTCTCAACAACTGTGCTGCCCA...CCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS GCA 90 bp | TGTAGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTaGTCCCAAAGGTCTCAATGGCATACACCTCTCCTTCCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CSVNIPCRHEPRPSP*SQRSQWHTPLLPPF Trigger: GAATGGAGGAAGGAGAGGTGTATGCCATTGAGACCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 ENSMUST00000181470.2 |
||
| CDS CCA 90 bp | TCTCCATCTTCATCGTCGTCATCTCTCTCCTTCTCCTCCAGTGCTTaGCTCTCCAGCTGTTTTGCTACTTCATCCACCAAGGCTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSSSSSSLSFSSSA*LSSCFATSSTKAPD Trigger: ATCCGGAGCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCCAAGCACTGGAGGAGAAGGAGAGAGATGACGACGATGAAGATGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAAAGGGGATTCCATAACTTCTaGAATGGCCTCACCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SVNIPCRHEPRPSPCSQRGFHNF*NGLTDI Trigger: GATGTCGGTGAGGCCATTCAAGAAGTTATGGAATCC...CCTTTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS GCA 90 bp | CTCCGGATTCTTTATCAAGTTCTTGTTGCACTGACACAGCCCCTTTaGCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCGGCTTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRILYQVLVALTQPL*PSSSSVFSSWRLPR Trigger: CCGAGGAAGCCGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAGAATCCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGTTCTAAAGAAAGCTTTCCAGGTCTTATGGATGGAGCTCTGCTGCTGCCAGGCTCTCCAGCTGTTTaGCTACTTCATCCACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCSKESFPGLMDGALLLPGSPAV*LLHPPR Trigger: CCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCC...TGGCAGCAGCAGAGCTCCATCCATAAGACCTGGAAAGCTTTCTTTAGAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGTGAACATTCCATGTCGTCATGAACCACGCCCTTCCCCGTGCTCCCAATACACCTCTCCTTCCTaGGTATGTCTTCCCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: CSVNIPCRHEPRPSPCSQYTSPS*VCLPIY Trigger: ATAGATGGGAAGACATACCAAGGAAGGAGAGGTGTA...TTGGGAGCACGGGGAAGGGCGTGGTTCATGACGACATGGAATGTTCACACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180392.8 |
||
| CDS GCA 90 bp | GCTACTTCATCCACCAAGGCTCCGGATTCTTTATCAAGTTCTTGTTaGACTGCTGACACAGCCCCTTTGCCCTTCTTCTTCTTCCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATSSTKAPDSLSSSC*TADTAPLPFFFFRL Trigger: AAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCCTTGGTGGATGAAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS GCA 90 bp | GTCATCTCTCTCCTTCTCCTCCAGTGCTTGGCTCTCCAGCTGTTTTaGTACTTCATCCACCAAGGCTCCGGATTCTTTATCAAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VISLLLLQCLALQLF*YFIHQGSGFFIKFL Trigger: CAAGAACTTGATAAAGAATCCGGAGCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCCAAGCACTGGAGGAGAAGGAGAGAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCCCTAAGTCTACCTTTCCTTCAGAGACAATGTCAAGCAAAATAAAAAGCTGTCCGCCCATCTaGTGTGGGTGGGTATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VQGPKSTFPSETMSSKIKSCPPI*CGWVFT Trigger: TGTGAATACCCACCCACACAAGATGGGCGGACAGCT...TTTTATTTTGCTTGACATTGTCTCTGAAGGAAAGGTAGACTTAGGGCCCTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS TCA 90 bp | ATCCACCAAGGCTCCGGATTCTTTATCAAGTTCTTGTTGCACTGCTaGCACAGCCCCTTTGCCCTTCTTCTTCTTCCGTCTTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHQGSGFFIKFLLHC*HSPFALLLLPSFLL Trigger: AAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCCTTGGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTATGTGCTGGGCAGCACAGTTGTaGAGAGAACACCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LINKPQQKHINRRQNPMCWAAQL*REHPVG Trigger: CCCCACTGGGTGTTCTCTCAACAACTGTGCTGCCCA...GCACATAGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS TCA 90 bp | TTCATCCACCAAGGCTCCGGATTCTTTATCAAGTTCTTGTTGCACTaGCACAGCCCCTTTGCCCTTCTTCTTCTTCCGTCTTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIHQGSGFFIKFLLH*HSPFALLLLPSFLL Trigger: AAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCCTTGGTGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCTGGGCAGCACAGTTGTaGAGAGAACACCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVWAAQL*REHPVG Trigger: CCCCACTGGGTGTTCTCTCAACAACTGTGCTGCCCA...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTACCTGGGCAAGGGACGAATTTGGAACTAAGATGGACCATTTCTAGCAAAGGATTCCATAACTTCTaGAATGGCCTCACCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: ALPGQGTNLELRWTISSKGFHNF*NGLTDI Trigger: GATGTCGGTGAGGCCATTCAAGAAGTTATGGAATCC...TTTGCTAGAAATGGTCCATCTTAGTTCCAAATTCGTCCCTTGCCCAGGTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS GCA 90 bp | TTGTCGTCCTCTCTTCTTCTTCTTCTTTTTCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATCTCCATCTTCATCGTCGTCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLLLLLFLLLPS*TISITISIFIVVIS Trigger: AGAGATGACGACGATGAAGATGGAGATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181091.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGCTGACACAGCCCCTTaGCCCTTCTTCTTCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVADTAP*PFFFFR Trigger: ACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCAGCTGTCCGCCCATCTaGTGTGGGTGGGTATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVSCPPI*CGWVFT Trigger: TGTGAATACCCACCCACACAAGATGGGCGGACAGCT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS GCA 90 bp | TTTTGGTCCTCTCTTCTTCTTCTTCTTTTTCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATCTCCATCTTCATCGTCGTCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FWSSLLLLLFLLLPS*TISITISIFIVVIS Trigger: AGAGATGACGACGATGAAGATGGAGATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047910.15 ENSMUST00000180688.2 ENSMUST00000180840.8 |
||
| CDS GCA 90 bp | TTGAAGTCCTCTCTTCTTCTTCTTCTTTTTCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATCTCCATCTTCATCGTCGTCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKSSLLLLLFLLLPS*TISITISIFIVVIS Trigger: AGAGATGACGACGATGAAGATGGAGATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180375.8 |
||
| CDS GCA 90 bp | ACTATGTCCTCTCTTCTTCTTCTTCTTTTTCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATCTCCATCTTCATCGTCGTCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TMSSLLLLLFLLLPS*TISITISIFIVVIS Trigger: AGAGATGACGACGATGAAGATGGAGATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGGCTCTCCAGCTGTTTaGCTACTTCATCCACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVGSPAV*LLHPPR Trigger: CCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGGCCCTAAGTCTACCTTTCCTTCAGAGACAATGTCAAGCAAAATAAAAACAAGTGTTTTGTTCTaGGAAGCCTTATTGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: VQGPKSTFPSETMSSKIKTSVLF*EALLAR Trigger: ACGTGCCAATAAGGCTTCCAAGAACAAAACACTTGT...TTTTATTTTGCTTGACATTGTCTCTGAAGGAAAGGTAGACTTAGGGCCCTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCTCTTCTTCTTCCCAGTaGCACCATCAGCATCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVSSSSQ*HHQHHH Trigger: ATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGA...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGGATTCCATAACTTCTaGAATGGCCTCACCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVGFHNF*NGLTDI Trigger: GATGTCGGTGAGGCCATTCAAGAAGTTATGGAATCC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CATTTACAAATATGCCACCTGATAGGCTTGCTATATTCTTGCCTCAGAAGAAATGGATTCCATAACTTCTaGAATGGCCTCACCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: HLQICHLIGLLYSCLRRNGFHNF*NGLTDI Trigger: GATGTCGGTGAGGCCATTCAAGAAGTTATGGAATCC...ATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAGGTGGCATATTTGTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR CAA 90 bp | CTGATAGGCTTGCTATATTCTTGCCTCAGAAGAAATGCTCATGAGTTATCAAGTACGTATGGGTTTCACTaGGTATGTCTTCCCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LIGLLYSCLRRNAHELSSTYGFH*VCLPIY Trigger: ATAGATGGGAAGACATACCAAGTGAAACCCATACGT...ACTTGATAACTCATGAGCATTTCTTCTGAGGCAAGAATATAGCAAGCCTATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181470.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTTATTAACAAACCGCAACAAAAACACATCAACCGAAGACAGAATCCTGTACCGAAGTTTTCGTaGATGACATTTAACAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLINKPQQKHINRRQNPVPKFS*MTFNKC Trigger: ACACTTGTTAAATGTCATCAACGAAAACTTCGGTAC...AGGATTCTGTCTTCGGTTGATGTGTTTTTGTTGCGGTTTGTTAATAAGCTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCACGTATGGGTTTCACTaGGTATGTCTTCCCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVTYGFH*VCLPIY Trigger: ATAGATGGGAAGACATACCAAGTGAAACCCATACGT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCACAAGTGTTTTGTTCTaGGAAGCCTTATTGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVTSVLF*EALLAR Trigger: ACGTGCCAATAAGGCTTCCAAGAACAAAACACTTGT...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTCCTAAAGAAAGTGACTTAATTTACAGCTTATATCTAAGCCAGGAAGAGACGTATGGGTTTCACTaGGTATGTCTTCCCATCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLPKESDLIYSLYLSQEETYGFH*VCLPIY Trigger: ATAGATGGGAAGACATACCAAGTGAAACCCATACGT...CTCTTCCTGGCTTAGATATAAGCTGTAAATTAAGTCACTTTCTTTAGGAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047910.15 |
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| CDS-3UTR CAA 90 bp | CAGTTTGCCTTTGATCAAACTCCTTTAAACATGAATAACGGTATTACACAGGTCGTACCGAAGTTTTCGTaGATGACATTTAACAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: QFAFDQTPLNMNNGITQVVPKFS*MTFNKC Trigger: ACACTTGTTAAATGTCATCAACGAAAACTTCGGTAC...GACCTGTGTAATACCGTTATTCATGTTTAAAGGAGTTTGATCAAAGGCAAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047910.15 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS CCA 72 bp | CTCGGCCGTGCTGGAGGTTCCCTCTTCCCTGTCGTCTaGATCCAGGTCGCCATTCAGGTGGCCCCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGRAGGSLFPVV*IQVAIQVAPEG Trigger: TCCTTCGGGGGCCACCTGAATGGCGACCTGGATCCAGACGACAGGGAAGAGGGAACCTCCAGCACGGCCGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS GCA 72 bp | TCTTCCGTCTTTTCTTCTTGGCGGCTTCCTCGGCCGTaGTGGAGGTTCCCTCTTCCCTGTCGTCTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SSVFSSWRLPRP*WRFPLPCRLDP Trigger: TGGATCCAGACGACAGGGAAGAGGGAACCTCCAGCACGGCCGAGGAAGCCGCCAAGAAGAAAAGACGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS CCA 72 bp | CCCCTTTGCCCTTCTTCTTCTTCCGTCTTTTCTTCTTaGCGGCTTCCTCGGCCGTGCTGGAGGTTCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLCPSSSSVFSS*RLPRPCWRFPL Trigger: AAGAGGGAACCTCCAGCACGGCCGAGGAAGCCGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS CAA 90 bp | ATCTCCATCTTCATCGTCGTCATCTCTCTCCTTCTCCTCCAGTGCTaGGCTCTCCAGCTGTTTTGCTACTTCATCCACCAAGGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: ISIFIVVISLLLLQC*ALQLFCYFIHQGSG Trigger: TCCGGAGCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCCAAGCACTGGAGGAGAAGGAGAGAGATGACGACGATGAAGATGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS GCA 72 bp | CTCCTTCTCCTCCAGTGCTTGGCTCTCCAGCTGTTTTaGTACTTCATCCACCAAGGCTCCGGATTCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: LLLLQCLALQLF*YFIHQGSGFFI Trigger: GATAAAGAATCCGGAGCCTTGGTGGATGAAGTAGCAAAACAGCTGGAGAGCCAAGCACTGGAGGAGAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS CAA 90 bp | GCTCCGGATTCTTTATCAAGTTCTTGTTGCACTGACACAGCCCCTTaGCCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCGGCTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: APDSLSSSCCTDTAP*PFFFFRLFFLAASS Trigger: CGAGGAAGCCGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAGAATCCGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
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| CDS TCA 72 bp | GGCTCCGGATTCTTTATCAAGTTCTTGTTGCACTGCTaGCACAGCCCCTTTGCCCTTCTTCTTCTTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGFFIKFLLHC*HSPFALLLLPS Trigger: AGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS GCA 72 bp | TCCACCAAGGCTCCGGATTCTTTATCAAGTTCTTGTTaGACTGCTGACACAGCCCCTTTGCCCTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: STKAPDSLSSSC*TADTAPLPFFF Trigger: GAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCCTTGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS TCA 72 bp | CAAGGCTCCGGATTCTTTATCAAGTTCTTGTTGCACTaGCACAGCCCCTTTGCCCTTCTTCTTCTTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: QGSGFFIKFLLH*HSPFALLLLPS Trigger: AGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAGAATCCGGAGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
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| CDS GCA 72 bp | TATCAAGTTCTTGTTGCACTGCTGACACAGCCCCTTTaGCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: YQVLVALLTQPL*PSSSSVFSSWR Trigger: CCGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS GCA 72 bp | CTTTATCAAGTTCTTGTTGCACTGACACAGCCCCTTTaGCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LYQVLVALTQPL*PSSSSVFSSWR Trigger: CCGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
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| CDS CAA 72 bp | TTATCAAGTTCTTGTTGCACTGCTGACACAGCCCCTTaGCCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSSSCCTADTAP*PFFFFRLFFLA Trigger: CGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGCAGTGCAACAAGAACTTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS CAA 72 bp | TCTTTATCAAGTTCTTGTTGCACTGACACAGCCCCTTaGCCCTTCTTCTTCTTCCGTCTTTTCTTCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLSSSCCTDTAP*PFFFFRLFFLA Trigger: CGCCAAGAAGAAAAGACGGAAGAAGAAGAAGGGCAAAGGGGCTGTGTCAGTGCAACAAGAACTTGATAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180688.2 |
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| CDS GCA 72 bp | TCTCTTCTTCTTCTTCTTTTTCTTCTTCTTCCCAGTTaGACCATCAGCATCACCATCTCCATCTTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: SLLLLLFLLLPS*TISITISIFIV Trigger: GACGATGAAGATGGAGATGGTGATGCTGATGGTGCAACTGGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000047910.15 ENSMUST00000180375.8 ENSMUST00000180688.2 ENSMUST00000180840.8 ENSMUST00000181091.8 ENSMUST00000181217.8 |
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| CDS TCA 72 bp | TACAGGTCACATATTGGAACTGAGGGAGGGTCTGTTTaGAGTCCTCTCTTCTTCTTCTTCTTTTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YRSHIGTEGGSV*SPLFFFFFFFF Trigger: GAAGAAGAAAAAGAAGAAGAAGAAGAGAGGACTTCAAACAGACCCTCCCTCAGTTCCAATATGTGACCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180375.8 |
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