Pregenerated sensors for METAP1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041921Ensembl transcript IDs: ENSMUST00000037210.9
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGGCCTaGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SSLRFLLDTADLCVA*GCFLSPLGLGGLLA Trigger: GGCCAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTCCCCAGACTTGTGTGTGGCCTaGGGATGCTTTCTCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: REVCFSSHKGCPVGPESPDLCVA*GCFLSP Trigger: AGGACTGAGAAAGCATCCCCAGGCCACACACAAGTC...TGGGGACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGGCGGAATATGGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGACAAGGGCTGTCCTGTaGGACCTGAGTCCCCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TWAEYGQEKGEPPAQEGRTRAVL*DLSPQS Trigger: GCTCTGGGGACTCAGGTCCAACAGGACAGCCCTTGT...CCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCCATATTCCGCCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGGCCTGTCAGTCCTCTGGGTCTaGGTGGCCTTCTGGCCGATT | + |
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Preference number: 3 (lower is better) Translates to: EPVLSAFSPRHCRLVCGLSVLWV*VAFWPI Trigger: AATCGGCCAGAAGGCCACCAAGACCCAGAGGACTGA...CAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR GCA 72 bp | CTCCTAGACACTGCAGACTTGTGTGTGGCCTGGGGATaGTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLDTADLCVAWG*FLSPLGLGGLL Trigger: CAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR GCA 72 bp | CCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTaGAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PEPVLSAFSPRH*RLVCGLGMLSQ Trigger: CTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR CCA 72 bp | CGTTTTCTCCTAGACACTGCAGACTTGTGTGTGGCCTaGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: RFLLDTADLCVA*GCFLSPLGLGG Trigger: GCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGCTTGGGGACAGGATGTaGGGGAGAGACGGCAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PQSPSSLRFLLDTADLCVLGDRM*GRDGSR Trigger: CCGGCTGCCGTCTCTCCCGCACATCCTGTCCCCAAG...CACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGAGGGGGCCCCAGCTCTaGAGGCTGCAATCGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PQSPSSLRFLLDTADLCVRGPQL*RLQSLH Trigger: ATGAAGCGATTGCAGCCTGCAGAGCTGGGGCCCCCT...CACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR CAA 72 bp | GGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTaGGACCTGAGTCCCCAGAGCCCGTCCTCTCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: GRFVFLATRAVL*DLSPQSPSSLR Trigger: ACGCAGAGAGGACGGGCTCTGGGGACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | AGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGGCCTGGTCCATAGCCCAGAGGTaGGGGATATGCGTCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPSSLRFLLDTADLCVAWSIAQR*GICVMP Trigger: AGGCATGACGCATATCCCTCACCTCTGGGCTATGGA...CCAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTGGCATCCTTCACTTCTATaGTGTCTCCCCAGTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CVWPGDAFSVLWVLVAFWHPSLL*CLPSPA Trigger: TGCCGGACTGGGGAGACAGCATAGAAGTGAAGGATG...CCAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | ACTTGGGCGGAATATGGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGAACTGCGCAGACCTTTaGTTGTCTAGGGAGACCACG | + |
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Preference number: 4 (lower is better) Translates to: TWAEYGQEKGEPPAQEGRNCADL*LSRETT Trigger: CGTGGTCTCCCTAGACAACCAAAGGTCTGCGCAGTT...CCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCCATATTCCGCCCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | GAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGGCCTGGTCGGCTGTCAGGAATaGCATGACAGAGCACGTTGT | + |
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Preference number: 4 (lower is better) Translates to: EPVLSAFSPRHCRLVCGLVGCQE*HDRARC Trigger: ACAACGTGCTCTGTCATGGCATTCCTGACAGCCGAC...CAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | TGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTGGCCGATTGGAGACCACGGTCCATaGGTCCTCAAGGACTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: WPGDAFSVLWVLVAFWPIGDHGP*VLKDFK Trigger: TTTAAAGTCCTTGAGGACGCATGGACCGTGGTCTCC...AATCGGCCAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| 3UTR CAA 72 bp | CCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTaGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PSSLRFLLDTAD*CVAWGCFLSPL Trigger: CAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | GGACCTGAGTCCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTGTCAGGAATGCCATaGCAGAGCACGTTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: GPESPEPVLSAFSPRHCRLSGMP*QSTLFT Trigger: TGTAAACAACGTGCTCTGTCATGGCATTCCTGACAG...TCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGGACTCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | GAGTCCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGATAATATCTCCATCCTaGAGAGGTCGGCTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESPEPVLSAFSPRHCRLVIISPS*RGRLSG Trigger: TCCTGACAGCCGACCTCTTCAGGATGGAGATATTAT...CACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | TTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTGGGTGCAAACAGATTTTaGAAAGCGTCCATAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCVAWGCFLSPLGLGGLLGANRF*KASIAQ Trigger: CTGGGCTATGGACGCTTTCCAAAATCTGTTTGCACC...CAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | GCCCAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGCTTCTTGTGGCAGTTTaGTCAGTATCTCCACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AQEGRFVFLATRAVLLDLLLVAV*SVSPLP Trigger: GGGGAGTGGAGATACTGACCAAACTGCCACAAGAAG...CAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCTTCCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | CAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCCTGATGATTTCCCAATaGACAAGCGCATCTATCTCT | + |
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Preference number: 4 (lower is better) Translates to: QTCVWPGDAFSVLWVLVALMISQ*TSASIS Trigger: AGAGATAGATGCGCTTGTTCATTGGGAAATCATCAG...GGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | GGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGTTTTTCTAGCCGTGTCCATGAAAGTATaGTCCTATCCCATGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GQEKGEPPAQEGRFVFLAVSMKV*SYPMSH Trigger: GTGGGACATGGGATAGGATCATACTTTCATGGACAC...GGCTAGAAAAACAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | GGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGAGTCTGGCTTCTTTATaGGCTTGGGGACAGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: GKGRTTCPGREVCFSSHKSLASL*AWGQDV Trigger: CACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACT...CTTGTGGCTAGAAAAACAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTCCCAGCTCTGCAGGCTaGAATCGCTTCATCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: QEGRFVFLATRAVLLDLSPSSAG*NRFIST Trigger: TGTAGAGATGAAGCGATTGCAGCCTGCAGAGCTGGG...ACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTGTGATGAGGACTGTGTaGTCGAACTGCGCAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: QEGRFVFLATRAVLLDLSVMRTV*SNCADL Trigger: AAGGTCTGCGCAGTTCGAGCACACAGTCCTCATCAC...ACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | GGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGCCATGCCCTCCTCCATaGGCAGATCATTGTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: GKGRTTCPGREVCFSSHKPCPPP*ADHCHL Trigger: CAAATGACAATGATCTGCCCATGGAGGAGGGCATGG...CTTGTGGCTAGAAAAACAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | TCCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGTCTTCTTTGTTGACTaGCTGACCGCTTGTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: SPEPVLSAFSPRHCRLVCVFFVD*LTACVS Trigger: ACTTACACAAGCGGTCAGGCAGTCAACAAAGAAGAC...ACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | AGACACTGCAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTCACTTTCATCCACATTaGCCACCAGAAAGGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RHCRLVCGLGMLSQSSGSHFHPH*PPERFQ Trigger: CTGAAACCTTTCTGGTGGGCAATGTGGATGAAAGTG...AGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | AGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTCCCCAGGTGAAACCACACTGTaGGAGATATCCCTTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: REVCFSSHKGCPVGPESPGETTL*EISLCL Trigger: GAGACAAAGGGATATCTCCCACAGTGTGGTTTCACC...TGGGGACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | GGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGTTTTTCTAGCCCATCTCTACACCTCCTaGCAACCTCCACTAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: GQEKGEPPAQEGRFVFLAHLYTS*QPPLTF Trigger: AAAAGTTAGTGGAGGTTGCCAGGAGGTGTAGAGATG...GGCTAGAAAAACAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | GGGCGGAATATGGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGATGTCCCACAAAATGTaGACAGACTTGCAAACCATT | + |
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Preference number: 4 (lower is better) Translates to: GRNMDRKRANHLPRKGGLMSHKM*TDLQTI Trigger: AATGGTTTGCAAGTCTGTCCACATTTTGTGGGACAT...CAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCCATATTCCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | CAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCAAGGACTTTAAATTCTaGGGAACCTTCAGTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: QTCVWPGDAFSVLWVLVAKDFKF*GTFSDD Trigger: ATCATCACTGAAGGTTCCCCAGAATTTAAAGTCCTT...GGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | AGACACTGCAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTGTAAGTAGATATGATTaGGTGGCGAAGACAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: RHCRLVCGLGMLSQSSGSVSRYD*VAKTEF Trigger: GAATTCTGTCTTCGCCACTCAATCATATCTACTTAC...AGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTGCAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR TCA 90 bp | CAGGAAGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTAAATGTCTTCTTTGTTaGCTGCCTGACCGCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QEGRFVFLATRAVLLDLSKCLLC*LPDRLC Trigger: ACACAAGCGGTCAGGCAGTCAACAAAGAAGACATTT...ACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CCA 90 bp | TCCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTGTAGATATGATTGAGTaGCGAAGACAGAATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPEPVLSAFSPRHCRLVCVDMIE*RRQNSL Trigger: CAGAGAATTCTGTCTTCGCCACTCAATCATATCTAC...ACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGGAGGTTTGTTTTTCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTCCCGTTGTTTACAGAGGTaGAAACAGATTTTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GREVCFSSHKGCPVGPESRCLQR*KQILES Trigger: GCTTTCCAAAATCTGTTTGCACCTCTGTAAACAACG...GGACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGAAAAACAAACCTCCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR GCA 90 bp | CAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGTTTTTCTAGCCACACAGATCATTGTCATTTaGATGATGCCAAATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QEKGEPPAQEGRFVFLATQIIVI*MMPNFW Trigger: CCAGAAATTTGGCATCATGCAAATGACAATGATCTG...TGTGGCTAGAAAAACAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 90 bp | CCCAGTCCGGCACAATGCCTGTCGTCACGTAGTCTGGCTTCTTTATaGGCTTGGGGACAGGATGTGCGGGAGAGACGGCAGCCGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PSPAQCLSSRSLASL*AWGQDVRERRQPVK Trigger: TTTCACCGGCTGCCGTCTCTCCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCATTGTGCCGGACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 90 bp | CCGGCACAATGCCTGTCGTCACGTAGTCTGGCTTCTTTATGCGCTTaGGGACAGGATGTGCGGGAGAGACGGCAGCCGGTGAAACCACAC | + |
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Preference number: 5 (lower is better) Translates to: PAQCLSSRSLASLCA*GQDVRERRQPVKPH Trigger: GTGTGGTTTCACCGGCTGCCGTCTCTCCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCATTGTGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 90 bp | TATGCTGTCTCCCCAGTCCGGCACAATGCCTGTCGTCACGTAGTCTaGCTTCTTTATGCGCTTGGGGACAGGATGTGCGGGAGAGACGGC | + |
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Preference number: 5 (lower is better) Translates to: YAVSPVRHNACRHVV*LLYALGDRMCGRDG Trigger: GCCGTCTCTCCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCATTGTGCCGGACTGGGGAGACAGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | CAGACTTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTGCGCAGACCTTTGGTaGTCTAGGGAGACCACGGTC | + |
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Preference number: 5 (lower is better) Translates to: QTCVWPGDAFSVLWVLVACADLW*SRETTV Trigger: GACCGTGGTCTCCCTAGACAACCAAAGGTCTGCGCA...GGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAAGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | TCTAGCCACAAGGGCTGTCCTGTTGGACCTGAGTCCCCAGAGCCCGTCCTCTCTCCACTTTCATCCACATaGCCCACCAGAAAGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSHKGCPVGPESPEPVLSPLSST*PTRKVS Trigger: TGAAACCTTTCTGGTGGGCAATGTGGATGAAAGTGG...AGAGAGGACGGGCTCTGGGGACTCAGGTCCAACAGGACAGCCCTTGTGGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | GGGCGGAATATGGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAGGTTTGGTGGGAGATATCCCTTaGTCTCCAGAAAAAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: GRNMDRKRANHLPRKGGLVGDIP*SPEKEM Trigger: CATTTCTTTTTCTGGAGACAAAGGGATATCTCCCAC...CAAACCTCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCCATATTCCGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | TCCCCAGAGCCCGTCCTCTCTGCGTTTTCTCCTAGACACTGCAGACTTGTGTGTAGCCTCACGAAGCCCTaGAATCTGATCTTCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPEPVLSAFSPRHCRLVCSLTKP*NLIFIL Trigger: AAGGATGAAGATCAGATTCAAGGGCTTCGTGAGGCT...ACACACAAGTCTGCAGTGTCTAGGAGAAAACGCAGAGAGGACGGGCTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 90 bp | GTCGGCTGTCAGGAATGCCATGACAGAGCACGTTGTTTACAGAGGTaGAAACAGATTTTGGAAAGCGTCCATAGCCCAGAGGTGAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: VGCQECHDRARCLQR*KQILESVHSPEVRD Trigger: ATCCCTCACCTCTGGGCTATGGACGCTTTCCAAAATCTGTTTGCACCTCTGTAAACAACGTGCTCTGTCATGGCATTCCTGACAGCCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | TTGTGTGTGGCCTGGGGATGCTTTCTCAGTCCTCTGGGTCTTGGTGGCCTTCTGGCAGATCATTGTCATTaGCATGATGCCAAATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LCVAWGCFLSPLGLGGLLADHCH*HDAKFL Trigger: CAGAAATTTGGCATCATGCAAATGACAATGATCTGC...CAGAAGGCCACCAAGACCCAGAGGACTGAGAAAGCATCCCCAGGCCACACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 90 bp | TACAGAGGTGCAAACAGATTTTGGAAAGCGTCCATAGCCCAGAGGTaGGGGATATGCGTCATGCCTGATGATTTCCCAATGAACAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: YRGANRFWKASIAQR*GICVMPDDFPMNKR Trigger: GCGCTTGTTCATTGGGAAATCATCAGGCATGACGCATATCCCTCACCTCTGGGCTATGGACGCTTTCCAAAATCTGTTTGCACCTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS-3UTR CAA 90 bp | AAACTTGGGCGGAATATGGACAGGAAAAGGGCGAACCACCTGCCCAGGAAGGGAAAAATGTGGACAGACTaGCAAACCATTCTGATGAGT | + |
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Preference number: 5 (lower is better) Translates to: KLGRNMDRKRANHLPRKGKMWTD*QTILMS Trigger: ACTCATCAGAATGGTTTGCAAGTCTGTCCACATTTT...TCCCTTCCTGGGCAGGTGGTTCGCCCTTTTCCTGTCCATATTCCGCCCAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 90 bp | GTCTTCTTTGTTGACTGCCTGACCGCTTGTGTAAGTAGATATGATTaGGTGGCGAAGACAGAATTCTCTGACAACCTCCACGGACGAGCA | + |
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Preference number: 5 (lower is better) Translates to: VFFVDCLTACVSRYD*VAKTEFSDNLHGRA Trigger: TGCTCGTCCGTGGAGGTTGTCAGAGAATTCTGTCTTCGCCACTCAATCATATCTACTTACACAAGCGGTCAGGCAGTCAACAAAGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 90 bp | ATTGTCATTTGCATGATGCCAAATTTCTGGGTGTCCATGAAAGTATaGTCCTATCCCATGTCCCACAAAATGTGGACAGACTTGCAAACC | + |
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Preference number: 5 (lower is better) Translates to: IVICMMPNFWVSMKV*SYPMSHKMWTDLQT Trigger: GGTTTGCAAGTCTGTCCACATTTTGTGGGACATGGGATAGGATCATACTTTCATGGACACCCAGAAATTTGGCATCATGCAAATGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 72 bp | TGCCTGTCGTCACGTAGTCTGGCTTCTTTATGCGCTTaGGGACAGGATGTGCGGGAGAGACGGCAGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLSSRSLASLCA*GQDVRERRQPV Trigger: CACCGGCTGCCGTCTCTCCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 72 bp | TCCCCAGTCCGGCACAATGCCTGTCGTCACGTAGTCTaGCTTCTTTATGCGCTTGGGGACAGGATGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SPVRHNACRHVV*LLYALGDRMCG Trigger: CCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCATTGTGCCGGACTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 72 bp | CTTGGGGACAGGATGTGCGGGAGAGACGGCAGCCGGTaGAACCACACTGTGGGAGATATCCCTTTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGDRMCGRDGSR*NHTVGDIPLSP Trigger: TGGAGACAAAGGGATATCTCCCACAGTGTGGTTTCACCGGCTGCCGTCTCTCCCGCACATCCTGTCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 72 bp | GCACAATGCCTGTCGTCACGTAGTCTGGCTTCTTTATaGGCTTGGGGACAGGATGTGCGGGAGAGACGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AQCLSSRSLASL*AWGQDVRERRQ Trigger: CTGCCGTCTCTCCCGCACATCCTGTCCCCAAGCGCATAAAGAAGCCAGACTACGTGACGACAGGCATTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 72 bp | TCCAATTACAGAGAAGGGGGCCCCAGCTCTGCAGGCTaGAATCGCTTCATCTCTACACCTCCTGGCAACCTC | + |
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Preference number: 6 (lower is better) Translates to: SNYREGGPSSAG*NRFISTPPGNL Trigger: GAGGTTGCCAGGAGGTGTAGAGATGAAGCGATTGCAGCCTGCAGAGCTGGGGCCCCCTTCTCTGTAATTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CAA 90 bp | CAGGAGGAGGACGTGTCTCGCCAGCCGACAAGCCTCACGAAGCCCTaGAATCTGATCTTCATCCTTCACTTCTATGCTGTCTCCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QEEDVSRQPTSLTKP*NLIFILHFYAVSPV Trigger: GACTGGGGAGACAGCATAGAAGTGAAGGATGAAGATCAGATTCAAGGGCTTCGTGAGGCTTGTCGGCTGGCGAGACACGTCCTCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 72 bp | AGTATCTCCACTCCCCTTGGCGTGATGAGGACTGTGTaGTCGAACTGCGCAGACCTTTGGTTGTCTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SISTPLGVMRTV*SNCADLWLSRE Trigger: CTCCCTAGACAACCAAAGGTCTGCGCAGTTCGAGCACACAGTCCTCATCACGCCAAGGGGAGTGGAGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 72 bp | TTCTTGTGGCAGTTTGGTCAGTATCTCCACTCCCCTTaGCGTGATGAGGACTGTGTGCTCGAACTGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLWQFGQYLHSP*RDEDCVLELRR Trigger: TCTGCGCAGTTCGAGCACACAGTCCTCATCACGCCAAGGGGAGTGGAGATACTGACCAAACTGCCACAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CAA 72 bp | GACGTGTCTCGCCAGCCGACAAGCCTCACGAAGCCCTaGAATCTGATCTTCATCCTTCACTTCTATGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DVSRQPTSLTKP*NLIFILHFYAV Trigger: GACAGCATAGAAGTGAAGGATGAAGATCAGATTCAAGGGCTTCGTGAGGCTTGTCGGCTGGCGAGACACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 72 bp | TGTGCGGGAGAGACGGCAGCCGGTGAAACCACACTGTaGGAGATATCCCTTTGTCTCCAGAAAAAGAAATGT | + |
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Preference number: 6 (lower is better) Translates to: CAGETAAGETTL*EISLCLQKKKC Trigger: ACATTTCTTTTTCTGGAGACAAAGGGATATCTCCCACAGTGTGGTTTCACCGGCTGCCGTCTCTCCCGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 72 bp | GCAAACAGATTTTGGAAAGCGTCCATAGCCCAGAGGTaGGGGATATGCGTCATGCCTGATGATTTCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: ANRFWKASIAQR*GICVMPDDFPM Trigger: CATTGGGAAATCATCAGGCATGACGCATATCCCTCACCTCTGGGCTATGGACGCTTTCCAAAATCTGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS GCA 72 bp | CAGGAATGCCATGACAGAGCACGTTGTTTACAGAGGTaGAAACAGATTTTGGAAAGCGTCCATAGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QECHDRARCLQR*KQILESVHSPE Trigger: CTCTGGGCTATGGACGCTTTCCAAAATCTGTTTGCACCTCTGTAAACAACGTGCTCTGTCATGGCATTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CCA 72 bp | GACCACGGTCCATGCGTCCTCAAGGACTTTAAATTCTaGGGAACCTTCAGTGATGATTGGCTCTATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: DHGPCVLKDFKF*GTFSDDWLYGE Trigger: TTCACCATAGAGCCAATCATCACTGAAGGTTCCCCAGAATTTAAAGTCCTTGAGGACGCATGGACCGTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 72 bp | GTTGACTGCCTGACCGCTTGTGTAAGTAGATATGATTaGGTGGCGAAGACAGAATTCTCTGACAACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VDCLTACVSRYD*VAKTEFSDNLH Trigger: GTGGAGGTTGTCAGAGAATTCTGTCTTCGCCACTCAATCATATCTACTTACACAAGCGGTCAGGCAGTCAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS CAA 72 bp | GCAACCTCCACTAACTTTTTACCACTTTCATCCACATaGCCCACCAGAAAGGTTTCAGAGGTGTCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ATSTNFLPLSST*PTRKVSEVSPW Trigger: CCATGGAGACACCTCTGAAACCTTTCTGGTGGGCAATGTGGATGAAAGTGGTAAAAAGTTAGTGGAGGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 72 bp | GGTGAGGGATATGCGTCATGCCTGATGATTTCCCAATaGACAAGCGCATCTATCTCTTCAGTTGTCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: GEGYASCLMISQ*TSASISSVVMS Trigger: TGACATGACAACTGAAGAGATAGATGCGCTTGTTCATTGGGAAATCATCAGGCATGACGCATATCCCTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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| CDS TCA 72 bp | TGCATGATGCCAAATTTCTGGGTGTCCATGAAAGTATaGTCCTATCCCATGTCCCACAAAATGTGGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: CMMPNFWVSMKV*SYPMSHKMWTD Trigger: GTCTGTCCACATTTTGTGGGACATGGGATAGGATCATACTTTCATGGACACCCAGAAATTTGGCATCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037210.9 |
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