Pregenerated sensors for METAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005813Ensembl transcript IDs: ENSMUST00000029804.13, ENSMUST00000197531.2, ENSMUST00000198700.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGCCACCCGTGTGAGCTAGCGCGTGCAGGCCAGGGAGAGGACTaGATCCCTGAAACAGGAGCCACAGGGCTGAGAGCGCTGCTAACC | + |
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Preference number: 1 (lower is better) Translates to: VCHPCELARAGQGED*IPETGATGLRALLT Trigger: GGTTAGCAGCGCTCTCAGCCCTGTGGCTCCTGTTTCAGGGATGCAGTCCTCTCCCTGGCCTGCACGCGCTAGCTCACACGGGTGGCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR GCA 90 bp | GCAGCAGTGCTCTGTAAAGCCACCCCGCAGCTGCCGGCCACTTCCTaGAGCACACACCAGACCTTAAAGTCTGACAACGTCTCACTCACT | + |
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Preference number: 1 (lower is better) Translates to: AAVLCKATPQLPATS*STHQTLKSDNVSLT Trigger: AGTGAGTGAGACGTTGTCAGACTTTAAGGTCTGGTGTGTGCTGCAGGAAGTGGCCGGCAGCTGCGGGGTGGCTTTACAGAGCACTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR CCA 90 bp | GCATGCCTTGTGGCCATGAGGACCAGAAGAGGGCATCTGGTCCCCTaGAACTTAGAGGAGGCTGTGAGCTATCACGGGGGTGCTAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: ACLVAMRTRRGHLVP*NLEEAVSYHGGARN Trigger: ATTCCTAGCACCCCCGTGATAGCTCACAGCCTCCTCTAAGTTCCAGGGGACCAGATGCCCTCTTCTGGTCCTCATGGCCACAAGGCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR TCA 90 bp | GGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCAGTGACAAAGCAGTaGGTGCAGGTTGAAGTCAAAGTGCTCAAGGGGCAAAGAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: GSSWPLVAGLAVTKQ*VQVEVKVLKGQRRK Trigger: TTTTCTTCTTTGCCCCTTGAGCACTTTGACTTCAACCTGCACTCACTGCTTTGTCACTGCCAGACCAGCCACCAAGGGCCAGCTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR CCA 90 bp | TGGACCACTGAGGAAGGGTGTGTCACCCTCGCACAGGGACCCCGCTaGGCCTCACAGAATCATTCCAATCTTAGTCTATTTTCTATCAGA | + |
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Preference number: 1 (lower is better) Translates to: WTTEEGCVTLAQGPR*ASQNHSNLSLFSIR Trigger: TCTGATAGAAAATAGACTAAGATTGGAATGATTCTGTGAGGCCCAGCGGGGTCCCTGTGCGAGGGTGACACACCCTTCCTCAGTGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR TCA 90 bp | GCCCTTGGTGGCTGGTCTGGCAGTGACAAAGCAGTGAGTGCAGGTTaGAGTCAAAGTGCTCAAGGGGCAAAGAAGAAAACACAGTACAGA | + |
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Preference number: 1 (lower is better) Translates to: ALGGWSGSDKAVSAG*SQSAQGAKKKTQYR Trigger: TCTGTACTGTGTTTTCTTCTTTGCCCCTTGAGCACTTTGACTTCAACCTGCACTCACTGCTTTGTCACTGCCAGACCAGCCACCAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR CCA 90 bp | AGGAACAAGGCATATACATATGAACACATTTCTAATGGCCAAGTTTaGCCGTGGCACATAATTAACCAAATACCACCAAAGACGTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: RNKAYTYEHISNGQV*PWHIINQIPPKTCK Trigger: CTTACACGTCTTTGGTGGTATTTGGTTAATTATGTGCCACGGCCAAACTTGGCCATTAGAAATGTGTTCATATGTATATGCCTTGTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGACTGCATCCCTGAAACAGGAGCCACAGGGCTGAGAGCGCTGCTAACCACTCCACACTCAGGAGGCTaGGACAGAAGGAGACTACAT | + |
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Preference number: 2 (lower is better) Translates to: EDCIPETGATGLRALLTTPHSGG*DRRRLH Trigger: ATGTAGTCTCCTTCTGTCTCAGCCTCCTGAGTGTGG...AGTGGTTAGCAGCGCTCTCAGCCCTGTGGCTCCTGTTTCAGGGATGCAGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR TCA 90 bp | TGCGCGGAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGAAAACTGAGGGGGTaGGGCCAGTGGTGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CAESSLQTDKINEQHGGERKLRG*GQWWKE Trigger: TTCCTTCCACCACTGGCCTCACCCCCTCAGTTTTCT...CTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTCCGCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR CCA 90 bp | TCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGTCTCCAACCTTCTGTTaGGAAGCAGCTGGCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SHLTKERSKAAVLCKATPSPTFC*EAAGPW Trigger: CCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGA...CGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR TCA 90 bp | GCTTCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCAGAAAACTGAGGGGGTaGGGCCAGTGGTGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ASHLTKERSKAAVLCKATRKLRG*GQWWKE Trigger: TTCCTTCCACCACTGGCCTCACCCCCTCAGTTTTCT...GGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGAGAAGCCAATTCTCCCGTTCGCTTTTCTCAACTGGACCACTGAGGAAGAACCAGCGCTGGACCTaGTGTGGATTCACAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: RGRSQFSRSLFSTGPLRKNQRWT*CGFTVS Trigger: AGATACTGTGAATCCACATCAGGTCCAGCGCTGGTT...CTTCCTCAGTGGTCCAGTTGAGAAAAGCGAACGGGAGAATTGGCTTCTCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGACTGCATCCCTGAAACAGGAGCCACAGGGCTGAGAGCGCTGCTAACCACTAAGACCAGTAAAGCTTaGCAGCAAACAATGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: EDCIPETGATGLRALLTTKTSKA*QQTMWR Trigger: TCTCCACATTGTTTGCTGTCAAGCTTTACTGGTCTT...AGTGGTTAGCAGCGCTCTCAGCCCTGTGGCTCCTGTTTCAGGGATGCAGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGGAGATCTCCAACCTTCTGTTaGGAAGCAGCTGGCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ESSLQTDKINEQHGGERRSPTFC*EAAGPW Trigger: CCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGA...TCTCCTCTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGAGACCCAAAAGCTCTTaGGGACACACACCAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: SHLTKERSKAAVLCKATPRPKSS*GHTPNA Trigger: AGCATTTGGTGTGTGTCCTCAAGAGCTTTTGGGTCT...CGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR CCA 90 bp | AAAAGATCCAAGCTTCATCCATCTCAGGTCTTACACGCAGACCAAGGAGAAAAGGCACAGGGACCCCGCTaGGCCTCACAGAATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: KRSKLHPSQVLHADQGEKAQGPR*ASQNHS Trigger: GGAATGATTCTGTGAGGCCCAGCGGGGTCCCTGTGC...CTTTTCTCCTTGGTCTGCGTGTAAGACCTGAGATGGATGAAGCTTGGATCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGATACTCTTGTGACAACTTTATCCTCTGGTGTTTGAACCACCACCGAGGAGCCTCTTCTCTTGAGTaGTCCAGAGGTGCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QGYSCDNFILWCLNHHRGASSLE*SRGAAS Trigger: TGAGGCTGCACCTCTGGAGCACTCAAGAGAAGAGGC...TCCTCGGTGGTGGTTCAAACACCAGAGGATAAAGTTGTCACAAGAGTATCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR CAA 90 bp | CAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTaGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCAGTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QHVAKVSRFLISNLL*GSSWPLVAGLAVTK Trigger: CTTTGTCACTGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTCCTTTCTCATTCTGTTATGTTTACTAATGGTAAAGCCACAGCCACCCAACTCCCCCATCCTCTaGCACAGGACAACTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TGSFLILLCLLMVKPQPPNSPIL*HRTTAS Trigger: AGAGGCAGTTGTCCTGTGGCAGAGGATGGGGGAGTT...GGGTGGCTGTGGCTTTACCATTAGTAAACATAACAGAATGAGAAAGGAGCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTTGGCTGGTCTGGCAGTaGCAAAGCAGTGAGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCWLVWQ*QSSECR Trigger: CCTGCACTCACTGCTTTGTCACTGCCAGACCAGCCA...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGGAGAAGGTTGAAGTCAAAGTaGTCAAGGGGCAAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: ESSLQTDKINEQHGGERRRLKSK*SRGKEE Trigger: TTCTTCTTTGCCCCTTGAGCACTTTGACTTCAACCT...TCTCCTCTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAAATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTGTTGGGAAGCAGCTaGCCCTTGGTGGCTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SKNLEQHVAKVSRFLISNLLGSS*PLVAGL Trigger: CAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAG...GTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGATTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGAGGCACTCTGGGAAAGATGTCTTGAAGTATGTGTCAGTGGTATCAAATTTATGGATCCGTTTCTaGGAGCAGATATCCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GLRHSGKDVLKYVSVVSNLWIRF*EQISCQ Trigger: TTGACAGGATATCTGCTCTCAGAAACGGATCCATAA...ATTTGATACCACTGACACATACTTCAAGACATCTTTCCCAGAGTGCCTCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR GCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCAGGTTGAAGTCAAAGTaGTCAAGGGGCAAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRYPVKAESTQTEGHIVFRLKSK*SRGKEE Trigger: TTCTTCTTTGCCCCTTGAGCACTTTGACTTCAACCT...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGATCCAAGCTTCATCCATCTCAGGTCTTACACGCAGACCAAGGAGAAAAGCTAAGTCCACTGACCTaGGTAGCAAATTACTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KRSKLHPSQVLHADQGEKLSPLT*VANYSS Trigger: AGATGAGTAATTTGCTACCCAGGTCAGTGGACTTAG...CTTTTCTCCTTGGTCTGCGTGTAAGACCTGAGATGGATGAAGCTTGGATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGATCCAAGCTTCATCCATCTCAGGTCTTACACGCAGACCAAGGAGAAAAGAAATGGAGTAACACGTaGAAAGAACTTAGCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: KRSKLHPSQVLHADQGEKKWSNT*KELSTV Trigger: CACTGTGCTAAGTTCTTTGCACGTGTTACTCCATTT...CTTTTCTCCTTGGTCTGCGTGTAAGACCTGAGATGGATGAAGCTTGGATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTATGCACAGTACGAGATaGTGTTCGTATGTTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCMHSTR*CSYVRH Trigger: ATGCCTAACATACGAACACCATCTCGTACTGTGCAT...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAGTATGTGTCAGTGGTATCAAATTATACTATAAAAGTCATGAGACACCCATAGCAGCAGCATACTaGGTGTTTACAGTACCGCAA | + |
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Preference number: 2 (lower is better) Translates to: LEVCVSGIKLYYKSHETPIAAAY*VFTVPQ Trigger: TTGCGGTACTGTAAACACTCAGTATGCTGCTGCTAT...GGGTGTCTCATGACTTTTATAGTATAATTTGATACCACTGACACATACTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR CAA 90 bp | GATCGTGGCATAAAGCCCGTTTCTCACTCGGGTCATAATAAAAGTTaGGGAGATACTGCCCAAATAATCTTCATTAATGAAATTAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: DRGIKPVSHSGHNKS*GDTAQIIFINEISL Trigger: TAGACTAATTTCATTAATGAAGATTATTTGGGCAGTATCTCCCAAACTTTTATTATGACCCGAGTGAGAAACGGGCTTTATGCCACGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGTATGTGTCAGTGGTATCAAATTATACTATAAAAGTCATGAGACACCCATGCACAGTACGAGATaGTGTTCGTATGTTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LEVCVSGIKLYYKSHETPMHSTR*CSYVRH Trigger: ATGCCTAACATACGAACACCATCTCGTACTGTGCAT...GGGTGTCTCATGACTTTTATAGTATAATTTGATACCACTGACACATACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR TCA 72 bp | GCTAGCGCGTGCAGGCCAGGGAGAGGACTGCATCCCTaGAACAGGAGCCACAGGGCTGAGAGCGCTGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: ASACRPGRGLHP*NRSHRAESAAN Trigger: GTTAGCAGCGCTCTCAGCCCTGTGGCTCCTGTTTCAGGGATGCAGTCCTCTCCCTGGCCTGCACGCGCTAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR CCA 72 bp | GTGGCCATGAGGACCAGAAGAGGGCATCTGGTCCCCTaGAACTTAGAGGAGGCTGTGAGCTATCACGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: VAMRTRRGHLVP*NLEEAVSYHGG Trigger: ACCCCCGTGATAGCTCACAGCCTCCTCTAAGTTCCAGGGGACCAGATGCCCTCTTCTGGTCCTCATGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR TCA 72 bp | CCCCATCCTCTGCCACAGGACAACTGCCTCTTCTCTTaGGTGCTCCAGAGGTGCAGCCTCACATCAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: PHPLPQDNCLFS*VLQRCSLTSEG Trigger: CCCTTCTGATGTGAGGCTGCACCTCTGGAGCACTCAAGAGAAGAGGCAGTTGTCCTGTGGCAGAGGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR GCA 72 bp | CTCTGTAAAGCCACCCCGCAGCTGCCGGCCACTTCCTaGAGCACACACCAGACCTTAAAGTCTGACAACGTC | + |
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Preference number: 3 (lower is better) Translates to: LCKATPQLPATS*STHQTLKSDNV Trigger: GACGTTGTCAGACTTTAAGGTCTGGTGTGTGCTGCAGGAAGTGGCCGGCAGCTGCGGGGTGGCTTTACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR TCA 72 bp | TGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCAGTaGCAAAGCAGTGAGTGCAGGTTGAAGTCAAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: WEAAGPWWLVWQ*QSSECRLKSKC Trigger: GCACTTTGACTTCAACCTGCACTCACTGCTTTGTCACTGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR TCA 72 bp | TGGCCCTTGGTGGCTGGTCTGGCAGTGACAAAGCAGTaGGTGCAGGTTGAAGTCAAAGTGCTCAAGGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: WPLVAGLAVTKQ*VQVEVKVLKGQ Trigger: TTGCCCCTTGAGCACTTTGACTTCAACCTGCACTCACTGCTTTGTCACTGCCAGACCAGCCACCAAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR GCA 72 bp | ATCCTCTGCCACAGGACAACTGCCTCTTCTCTTGAGTaGTCCAGAGGTGCAGCCTCACATCAGAAGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: ILCHRTTASSLE*SRGAASHQKGL Trigger: CAGACCCTTCTGATGTGAGGCTGCACCTCTGGAGCACTCAAGAGAAGAGGCAGTTGTCCTGTGGCAGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR TCA 72 bp | AGTGCTCCAGAGGTGCAGCCTCACATCAGAAGGGTCTaGAAAAAGGGGGCTTCACACCTGACCAAAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SAPEVQPHIRRV*KKGASHLTKER Trigger: CCTCTCTTTGGTCAGGTGTGAAGCCCCCTTTTTTCAGACCCTTCTGATGTGAGGCTGCACCTCTGGAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR TCA 72 bp | TGTGTACAGATATTCCACACGCATGCCTTGTGGCCATaGGGACCAGAAGAGGGCATCTGGTCCCCTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: CVQIFHTHALWP*GPEEGIWSPGT Trigger: AGTTCCAGGGGACCAGATGCCCTCTTCTGGTCCTCATGGCCACAAGGCATGCGTGTGGAATATCTGTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR CCA 72 bp | GAGGAAGGGTGTGTCACCCTCGCACAGGGACCCCGCTaGGCCTCACAGAATCATTCCAATCTTAGTCTATTT | + |
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Preference number: 3 (lower is better) Translates to: EEGCVTLAQGPR*ASQNHSNLSLF Trigger: AAATAGACTAAGATTGGAATGATTCTGTGAGGCCCAGCGGGGTCCCTGTGCGAGGGTGACACACCCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAGACACCCAGCAATCAAGGATACTCTTGTGACAACTTTATCCTCTGGTGGAAGCAGCTGGCCCTaGGTGGCTGGTCTGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VMRHPAIKDTLVTTLSSGGSSWP*VAGLAV Trigger: CACTGCCAGACCAGCCACCAAGGGCCAGCTGCTTCC...ACCAGAGGATAAAGTTGTCACAAGAGTATCCTTGATTGCTGGGTGTCTCATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR CAA 90 bp | TGCGCGGAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGCAGTGAGTGCAGGTaGAAGTCAAAGTGCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: CAESSLQTDKINEQHGGESSECR*KSKCSR Trigger: CCTTGAGCACTTTGACTTCAACCTGCACTCACTGCT...CTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTCCGCGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR GCA 72 bp | CTGACAACGTCTCACTCACTGACACACAGTCCACACTaGGCGGAGTCTTCCCTGCAGACAGACAAGATAAAT | + |
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Preference number: 3 (lower is better) Translates to: LTTSHSLTHSPH*AESSLQTDKIN Trigger: ATTTATCTTGTCTGTCTGCAGGGAAGACTCCGCGCAGTGTGGACTGTGTGTCAGTGAGTGAGACGTTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR TCA 72 bp | GGCTGGTCTGGCAGTGACAAAGCAGTGAGTGCAGGTTaGAGTCAAAGTGCTCAAGGGGCAAAGAAGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: GWSGSDKAVSAG*SQSAQGAKKKT Trigger: TGTTTTCTTCTTTGCCCCTTGAGCACTTTGACTTCAACCTGCACTCACTGCTTTGTCACTGCCAGACCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| 3UTR TCA 72 bp | AAGGATACTCTTGTGACAACTTTATCCTCTGGTGTTTaGACCACCACCGAGGAGCACAGATTCCGGGCAACC | + |
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Preference number: 3 (lower is better) Translates to: KDTLVTTLSSGV*TTTEEHRFRAT Trigger: GGTTGCCCGGAATCTGTGCTCCTCGGTGGTGGTTCAAACACCAGAGGATAAAGTTGTCACAAGAGTATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAGACACCCAGCAATCAAGGATACTCTTGTGACAACTTTATCCTCTGGTATCTCCAACCTTCTGTaGGGAAGCAGCTGGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VMRHPAIKDTLVTTLSSGISNLL*GSSWPL Trigger: CAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGAT...ACCAGAGGATAAAGTTGTCACAAGAGTATCCTTGATTGCTGGGTGTCTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| 3UTR TCA 72 bp | GAGAGCGCTGCTAACCACTCGGCTAGCTCCCCAGCCTaGTTCACATCAAAAGATAGGGCTATTAATTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: ESAANHSASSPA*FTSKDRAINSI Trigger: TATTGAATTAATAGCCCTATCTTTTGATGTGAATCAGGCTGGGGAGCTAGCCGAGTGGTTAGCAGCGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| 3UTR CCA 72 bp | AGCAATCAAGGATACTCTTGTGACAACTTTATCCTCTaGTGTTTGAACCACCACCGAGGAGCACAGATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SNQGYSCDNFIL*CLNHHRGAQIP Trigger: CGGAATCTGTGCTCCTCGGTGGTGGTTCAAACACCAGAGGATAAAGTTGTCACAAGAGTATCCTTGATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| 3UTR CCA 72 bp | TACAATTCCAAAGGTCAGAGACTAAGTCCACTGACCTaGGTAGCAAATTACTCATCTTCTCTGCATGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YNSKGQRLSPLT*VANYSSSLHVS Trigger: TGAGACATGCAGAGAAGATGAGTAATTTGCTACCCAGGTCAGTGGACTTAGTCTCTGACCTTTGGAATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| 3UTR CCA 72 bp | CATCATTCTCTTAAAGCAATAAGGTCTGAGGCACTCTaGGAAAGATGTCTTGAAGTATGTGTCAGTGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: HHSLKAIRSEAL*ERCLEVCVSGI Trigger: GATACCACTGACACATACTTCAAGACATCTTTCCCAGAGTGCCTCAGACCTTATTGCTTTAAGAGAATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| 3UTR GCA 72 bp | GAAACAGTCAACACAGCAACTATTTCAAAATCTTGGTaGGGTGGGTGTGAAACAAATCAACCCTATTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ETVNTATISKSW*GGCETNQPYLH Trigger: ATGCAAATAGGGTTGATTTGTTTCACACCCACCGCACCAAGATTTTGAAATAGTTGCTGTGTTGACTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| 3UTR CCA 72 bp | ACATATGAACACATTTCTAATGGCCAAGTTTGGCCGTaGCACATAATTAACCAAATACCACCAAAGACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TYEHISNGQVWP*HIINQIPPKTC Trigger: ACACGTCTTTGGTGGTATTTGGTTAATTATGTGCCACGGCCAAACTTGGCCATTAGAAATGTGTTCATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| 3UTR CCA 72 bp | GCATATACATATGAACACATTTCTAATGGCCAAGTTTaGCCGTGGCACATAATTAACCAAATACCACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AYTYEHISNGQV*PWHIINQIPPK Trigger: CTTTGGTGGTATTTGGTTAATTATGTGCCACGGCCAAACTTGGCCATTAGAAATGTGTTCATATGTATATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGCAGCTGCCGGCCATGGGACACTGGAGCTTaGCCTCGCTGCTGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRGLKQQCSVKPPRSCRPWDTGA*PRCCSR Trigger: ACGGCTGCAGCAGCGAGGCCAAGCTCCAGTGTCCCA...TGGCCGGCAGCTGCGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGCAGCTGCCGGCCAATGCAGGTGGGACACTaGAGCTTGGCCTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGLKQQCSVKPPRSCRPMQVGH*SLASLL Trigger: CAGCAGCGAGGCCAAGCTCCAGTGTCCCACCTGCAT...TGGCCGGCAGCTGCGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | CTCATCTCCAACCTTCTGTTGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCAAGGGTGTGCTCAAACTaGGCAGATCGCTTCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LISNLLLGSSWPLVAGLARVCSN*ADRFPS Trigger: GGACGGGAAGCGATCTGCTCAGTTTGAGCACACCCT...TGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR CCA 90 bp | GAGGACTGCATCCCTGAAACAGGAGCCACAGGGCTGAGAGCGCTGCTAACCACTGCCTCTGAATGTAACTaGGCACTGGCCGTGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDCIPETGATGLRALLTTASECN*ALAVLA Trigger: TGCCAACACGGCCAGTGCCCAGTTACATTCAGAGGC...AGTGGTTAGCAGCGCTCTCAGCCCTGTGGCTCCTGTTTCAGGGATGCAGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| 3UTR CAA 72 bp | CCCCCATCCTCTGCCACAGGACAACTGCCTCTTCTCTaGAGTGCTCCAGAGGTGCAGCCTCACATCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSATGQLPLL*SAPEVQPHIRR Trigger: CCTTCTGATGTGAGGCTGCACCTCTGGAGCACTCAAGAGAAGAGGCAGTTGTCCTGTGGCAGAGGATGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | ACAGCAAACAATGTGGAGACAAAGGGGGAGAAGCCAATTCTCCCGTTCGCTTTTGGAGCTTGGCCTCGCTaGTGCAGCCGTCCGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TANNVETKGEKPILPFAFGAWPR*CSRPSR Trigger: GCGAGACGGACGGCTGCAGCAGCGAGGCCAAGCTCC...AAAAGCGAACGGGAGAATTGGCTTCTCCCCCTTTGTCTCCACATTGTTTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAGAAGCCAATTCTCCCGTTCGCTTTTCTCAACTGGACCACTGAGGAAGATGCAGGTGGGACACTaGAGCTTGGCCTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRSQFSRSLFSTGPLRKMQVGH*SLASLL Trigger: CAGCAGCGAGGCCAAGCTCCAGTGTCCCACCTGCAT...CTTCCTCAGTGGTCCAGTTGAGAAAAGCGAACGGGAGAATTGGCTTCTCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR TCA 90 bp | GAGACTACATGTGAGGCCAGCCTGGGCGAAGCAGTAAGATCATGTCTCAAGACTCCTGGATGCCCAGCTTaGTGCAGGTGGGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETTCEASLGEAVRSCLKTPGCPA*CRWDTG Trigger: TCCAGTGTCCCACCTGCATCAAGCTGGGCATCCAGG...AGTCTTGAGACATGATCTTACTGCTTCGCCCAGGCTGGCCTCACATGTAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR TCA 90 bp | TCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGAGGGTGTGCTCAAACTaGGCAGATCGCTTCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLTKERSKAAVLCKATPRVCSN*ADRFPS Trigger: GGACGGGAAGCGATCTGCTCAGTTTGAGCACACCCT...CGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAACAATGTGGAGACAAAGGGGGAGAAGCCAATTCTCCCGTTCGCTTTTTGGGACACTGGAGCTTaGCCTCGCTGCTGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TANNVETKGEKPILPFAFWDTGA*PRCCSR Trigger: ACGGCTGCAGCAGCGAGGCCAAGCTCCAGTGTCCCA...AAAAGCGAACGGGAGAATTGGCTTCTCCCCCTTTGTCTCCACATTGTTTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR GCA 90 bp | GACAACGTCTCACTCACTGACACACAGTCCACACTGCGCGGAGTCTTCCCTGCAACAATATCACCTTCTTaGAAAGGCCGCCTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNVSLTDTQSTLRGVFPATISPS*KGRLSG Trigger: TCCAGACAGGCGGCCTTTGCAAGAAGGTGATATTGT...TGCAGGGAAGACTCCGCGCAGTGTGGACTGTGTGTCAGTGAGTGAGACGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | CTCATCTCCAACCTTCTGTTGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCATTATGTAGTAACTTGTaGGTGGCCCAGCTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LISNLLLGSSWPLVAGLALCSNL*VAQLPL Trigger: TAAAGGAAGCTGGGCCACTCACAAGTTACTACATAA...TGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | GACAACGTCTCACTCACTGACACACAGTCCACACTGCGCGGAGTCTTCCCTGCACACTCATATGTAGTCTaGACAAGTTTCCGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DNVSLTDTQSTLRGVFPAHSYVV*TSFRAP Trigger: AGGAGCACGGAAACTTGTTCAGACTACATATGAGTG...TGCAGGGAAGACTCCGCGCAGTGTGGACTGTGTGTCAGTGAGTGAGACGTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR GCA 90 bp | TATCCTCTGGTGTTTGAACCACCACCGAGGAGCACAGATTCCGGGCAACCTAGTAACACCAGGCTTCACTaGATCGATGGCTTGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPLVFEPPPRSTDSGQPSNTRLH*IDGLHQ Trigger: CTGATGCAAGCCATCGATGCAGTGAAGCCTGGTGTT...ACTAGGTTGCCCGGAATCTGTGCTCCTCGGTGGTGGTTCAAACACCAGAGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | GAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGGAGATGCAGTCCAGCCATCTaGCCAAGTCTCATCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQTDKINEQHGGERRCSPAI*PSLILP Trigger: TGGCAGGATGAGACTTGGCCAGATGGCTGGACTGCA...TCTCCTCTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR CCA 90 bp | CTCATCTCCAACCTTCTGTTGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCATATTTTCTGCATCGATaGCTTGCATCAGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LISNLLLGSSWPLVAGLAYFLHR*LASGTH Trigger: ATGAGTGCCTGATGCAAGCCATCGATGCAGAAAATA...TGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198700.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCCTTTCTCATTCTGTTATGTTTACTAATGGTAAAGCCACAGCCACCCCCTGGATGCCCAGCTTaGTGCAGGTGGGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLILLCLLMVKPQPPPGCPA*CRWDTG Trigger: TCCAGTGTCCCACCTGCATCAAGCTGGGCATCCAGG...GGGTGGCTGTGGCTTTACCATTAGTAAACATAACAGAATGAGAAAGGAGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | TATCCTCTGGTGTTTGAACCACCACCGAGGAGCACAGATTCCGGGCAACCTAGTGGGCGTGTTTCTGAATaGTGTTTCCCAGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPLVFEPPPRSTDSGQPSGRVSE*CFPVLC Trigger: ACAGAGAACTGGGAAACATCATTCAGAAACACGCCC...ACTAGGTTGCCCGGAATCTGTGCTCCTCGGTGGTGGTTCAAACACCAGAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| 3UTR CAA 72 bp | GCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTaGGGAAGCAGCTGGCCCTTGGTGGCTGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKVSRFLISNLL*GSSWPLVAGLA Trigger: TGCCAGACCAGCCACCAAGGGCCAGCTGCTTCCCAACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR GCA 90 bp | CATTTCCATACTTTCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGGGAGCTTGGCCTCGCTaGTGCAGCCGTCCGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFHTFNKMHSTRWCSYVRGAWPR*CSRPSR Trigger: GCGAGACGGACGGCTGCAGCAGCGAGGCCAAGCTCC...CCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGAAAGTATGGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | GAGACTACATGTGAGGCCAGCCTGGGCGAAGCAGTAAGATCATGTCTCAAGACTCCGTGTTGGCATCAGTaGATAATGTGGCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETTCEASLGEAVRSCLKTPCWHQ*IMWPEF Trigger: AAACTCAGGCCACATTATCCACTGATGCCAACACGG...AGTCTTGAGACATGATCTTACTGCTTCGCCCAGGCTGGCCTCACATGTAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR CCA 90 bp | TCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGACATTGGGGGCTGTATaGAAAAGTTTGTGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLTKERSKAAVLCKATPTLGAV*KSLWIP Trigger: TGGGATCCACAAACTTTTCCATACAGCCCCCAATGT...CGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| 3UTR CAA 72 bp | CAAGGATACTCTTGTGACAACTTTATCCTCTGGTGTTaGAACCACCACCGAGGAGCACAGATTCCGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGYSCDNFILWC*NHHRGAQIPGN Trigger: GTTGCCCGGAATCTGTGCTCCTCGGTGGTGGTTCAAACACCAGAGGATAAAGTTGTCACAAGAGTATCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | AGGGGGAGAAGCCAATTCTCCCGTTCGCTTTTCTCAACTGGACCACTGAGGAAGTTATGTAGTAACTTGTaGGTGGCCCAGCTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGRSQFSRSLFSTGPLRKLCSNL*VAQLPL Trigger: TAAAGGAAGCTGGGCCACTCACAAGTTACTACATAA...CTTCCTCAGTGGTCCAGTTGAGAAAAGCGAACGGGAGAATTGGCTTCTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGGAGAGAATCCCATGGCAGATaGCTTCATTCACTGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQTDKINEQHGGERRESHGR*LHSLRY Trigger: GTACCTCAGTGAATGAAGTCATCTGCCATGGGATTC...TCTCCTCTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | GAGTCTTCCCTGCAGACAGACAAGATAAATGAACAGCATGGGGGTGAGAGGAGAGCTTGGGCGTGTTTCTaGATGATGTTTCCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQTDKINEQHGGERRAWACF*MMFPSS Trigger: AGAACTGGGAAACATCATTCAGAAACACGCCCAAGC...TCTCCTCTCACCCCCATGCTGTTCATTTATCTTGTCTGTCTGCAGGGAAGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | GACAACGTCTCACTCACTGACACACAGTCCACACTGCGCGGAGTCTTCCCTGCACTTCATCACACCAACTaGTTTATTTTTGGCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DNVSLTDTQSTLRGVFPALHHTN*FIFGIV Trigger: CACTATGCCAAAAATAAAGCAGTTGGTGTGATGAAG...TGCAGGGAAGACTCCGCGCAGTGTGGACTGTGTGTCAGTGAGTGAGACGTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | TCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGCATCTTGAGAGAACCCGTCCCTCGTCACTaGAGTCCAGCCATCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKCTVRDGVRMLGILREPVPRH*SPAIWP Trigger: TGGCCAGATGGCTGGACTGCAGTGACGAGGGACGGG...TTCTCTCAAGATGCCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGAGACACCCAGCAATCAAGGATACTCTTGTGACAACTTTATCCTCTGGTGCCTCTGAATGTAACTaGGCACTGGCCGTGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VMRHPAIKDTLVTTLSSGASECN*ALAVLA Trigger: TGCCAACACGGCCAGTGCCCAGTTACATTCAGAGGC...ACCAGAGGATAAAGTTGTCACAAGAGTATCCTTGATTGCTGGGTGTCTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | TCACACCTGACCAAAGAGAGGTCTAAAGCAGCAGTGCTCTGTAAAGCCACCCCGAGCAATTTCTTGCAATaGATGCTAAGTGTACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLTKERSKAAVLCKATPSNFLQ*MLSVQR Trigger: ACGCTGTACACTTAGCATGCATTGCAAGAAATTGCT...CGGGGTGGCTTTACAGAGCACTGCTGCTTTAGACCTCTCTTTGGTCAGGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | AATTCCAAAGGTCAGAGACTAAGTCCACTGACCTGGGTAGCAAATTACTCATCTTGCACACTGTGGAGATaGGCCAAGCAGGACTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NSKGQRLSPLTWVANYSSCTLWR*AKQDLP Trigger: AGGTAAGTCCTGCTTGGCTCATCTCCACAGTGTGCA...AGATGAGTAATTTGCTACCCAGGTCAGTGGACTTAGTCTCTGACCTTTGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCCCTTTAAAGCATTCCTaGGAGCAGAAGTACGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRYPVKAESTQTEGHIVFPLKHS*EQKYEP Trigger: GGGCTCGTACTTCTGCTCGCAGGAATGCTTTAAAGG...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | TCAGAGACTAAGTCCACTGACCTGGGTAGCAAATTACTCATCTTCTCTGCATGTCCTTTAAAGCATTCCTaGGAGCAGAAGTACGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SETKSTDLGSKLLIFSACPLKHS*EQKYEP Trigger: GGGCTCGTACTTCTGCTCGCAGGAATGCTTTAAAGG...ACATGCAGAGAAGATGAGTAATTTGCTACCCAGGTCAGTGGACTTAGTCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCCTGAACAAGTTTCCGTaGTCCTTCATCCACATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRYPVKAESTQTEGHIVFLNKFP*SFIHIA Trigger: GGCGATGTGGATGAAGGAGCACGGAAACTTGTTCAG...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCGCTTCACTGCATCGATaGCTTGCATCAGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRYPVKAESTQTEGHIVFASLHR*LASGTH Trigger: ATGAGTGCCTGATGCAAGCCATCGATGCAGTGAAGC...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | CATCATTCTCTTAAAGCAATAAGGTCTGAGGCACTCTGGGAAAGATGTCTTGAATGCAGTCCAGCCATCTaGCCAAGTCTCATCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHSLKAIRSEALWERCLECSPAI*PSLILP Trigger: TGGCAGGATGAGACTTGGCCAGATGGCTGGACTGCA...TTCAAGACATCTTTCCCAGAGTGCCTCAGACCTTATTGCTTTAAGAGAATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCQKYEP*MPSLMQ Trigger: CTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTG...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR GCA 90 bp | CATCATTCTCTTAAAGCAATAAGGTCTGAGGCACTCTGGGAAAGATGTCTTGAACTGAACAAGTTTCCGTaGTCCTTCATCCACATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHSLKAIRSEALWERCLELNKFP*SFIHIA Trigger: GGCGATGTGGATGAAGGAGCACGGAAACTTGTTCAG...TTCAAGACATCTTTCCCAGAGTGCCTCAGACCTTATTGCTTTAAGAGAATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCCTGTCTGGAATCCCATaGCAGATGACTTCATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRYPVKAESTQTEGHIVFLSGIP*QMTSFT Trigger: AGTGAATGAAGTCATCTGCCATGGGATTCCAGACAG...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
||
| CDS-3UTR TCA 90 bp | GTCATGAGACACCCAGCAATCAAGGATACTCTTGTGACAACTTTATCCTCTGGTGATGACTTCATTCACTaGGGTACAACAAGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMRHPAIKDTLVTTLSSGDDFIH*GTTRLW Trigger: CCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATC...ACCAGAGGATAAAGTTGTCACAAGAGTATCCTTGATTGCTGGGTGTCTCATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR TCA 90 bp | GGTCTGAGGCACTCTGGGAAAGATGTCTTGAAGTATGTGTCAGTGGTATCAAATTCAATTGTAAACACATaGCCCGACTTCATCACACCA | + |
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Preference number: 4 (lower is better) Translates to: GLRHSGKDVLKYVSVVSNSIVNT*PDFITP Trigger: TGGTGTGATGAAGTCGGGTCATGTGTTTACAATTGA...ATTTGATACCACTGACACATACTTCAAGACATCTTTCCCAGAGTGCCTCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR TCA 90 bp | ATTTCCATACTTTCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGCTATCGAGTCTCCGGGTaGGAATTTCACAGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ISILSIKCTVRDGVRMLGYRVSG*EFHSQC Trigger: ACACTGGCTGTGAAATTCTCACCCGGAGACTCGATA...GCCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGAAAGTATGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| CDS-3UTR TCA 90 bp | CATTTCCATACTTTCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGTATCGAGTCTCCGGGTaGGAATTTCACAGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: HFHTFNKMHSTRWCSYVRYRVSG*EFHSQC Trigger: ACACTGGCTGTGAAATTCTCACCCGGAGACTCGATA...CCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGAAAGTATGGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| CDS-3UTR GCA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCAACTGCTTTATTTTCTaGATCGATGGCTTGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: SRYPVKAESTQTEGHIVFNCFIF*IDGLHQ Trigger: CTGATGCAAGCCATCGATGCAGAAAATAAAGCAGTT...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198700.2 |
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| CDS-3UTR CCA 90 bp | GAGTGTTTACAGTACCGCAACAGGCTCCTTTCTCATTCTGTTATGTTTACTAATCCGTGTTGGCATCAGTaGATAATGTGGCCTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ECLQYRNRLLSHSVMFTNPCWHQ*IMWPEF Trigger: AAACTCAGGCCACATTATCCACTGATGCCAACACGG...ATTAGTAAACATAACAGAATGAGAAAGGAGCCTGTTGCGGTACTGTAAACACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR CCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTTGTCCAAAACTTCTCTaGCAAGCCTACACACGAGTC | + |
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Preference number: 4 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCCPKLL*QAYTRV Trigger: GACTCGTGTGTAGGCTTGCCAGAGAAGTTTTGGACA...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR TCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTCACTCATATGTAGTCTaGACAAGTTTCCGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCHSYVV*TSFRAP Trigger: AGGAGCACGGAAACTTGTTCAGACTACATATGAGTG...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| CDS-3UTR CCA 90 bp | TCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGCATCTTGAGAGAAGCTAAGTGTACAGCGTaGTCGATCTCTTCAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SIKCTVRDGVRMLGILREAKCTA*SISSVV Trigger: AACTACTGAAGAGATCGACCACGCTGTACACTTAGC...TTCTCTCAAGATGCCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR TCA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTTCAATTGTAAACACATaGCCCGACTTCATCACACCA | + |
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Preference number: 4 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCSIVNT*PDFITP Trigger: TGGTGTGATGAAGTCGGGTCATGTGTTTACAATTGA...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| CDS-3UTR CCA 90 bp | GAGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTGGTACAACAAGACTTTaGGAAGTTATAGTAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: EQISCQSRINPDRRSYSVGTTRL*EVIVIQ Trigger: CTGAATTACTATAACTTCCCAAAGTCTTGTTGTACC...AACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR CCA 90 bp | ATTTCCATACTTTCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGCCAACTGCTTTATTTTTaGCATAGTGCGGGACATTGG | + |
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Preference number: 4 (lower is better) Translates to: ISILSIKCTVRDGVRMLGQLLYF*HSAGHW Trigger: CCAATGTCCCGCACTATGCCAAAAATAAAGCAGTTG...GCCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGAAAGTATGGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR GCA 90 bp | ATTTCCATACTTTCAATAAAATGCACAGTACGAGATGGTGTTCGTATGTTAGGCCTTCATCACACCAACTaGTTTATTTTCTGCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: ISILSIKCTVRDGVRMLGLHHTN*FIFCID Trigger: ATCGATGCAGAAAATAAAGCAGTTGGTGTGATGAAG...GCCTAACATACGAACACCATCTCGTACTGTGCATTTTATTGAAAGTATGGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198700.2 |
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| 3UTR CAA 72 bp | ATAAAGCCCGTTTCTCACTCGGGTCATAATAAAAGTTaGGGAGATACTGCCCAAATAATCTTCATTAATGAA | + |
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Preference number: 4 (lower is better) Translates to: IKPVSHSGHNKS*GDTAQIIFINE Trigger: TTCATTAATGAAGATTATTTGGGCAGTATCTCCCAAACTTTTATTATGACCCGAGTGAGAAACGGGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| CDS-3UTR CAA 90 bp | AGCAGATATCCTGTCAAAGCAGAATCAACCCAGACCGAAGGTCATATAGTGTTCTGGGCACTGGCCGTGTaGGCATCAGTGGATAATGTG | + |
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Preference number: 5 (lower is better) Translates to: SRYPVKAESTQTEGHIVFWALAV*ASVDNV Trigger: CACATTATCCACTGATGCCAACACGGCCAGTGCCCA...GAACACTATATGACCTTCGGTCTGGGTTGATTCTGCTTTGACAGGATATCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR CAA 90 bp | TCAGAGACTAAGTCCACTGACCTGGGTAGCAAATTACTCATCTTCTCTGCATGTTGGGCACTGGCCGTGTaGGCATCAGTGGATAATGTG | + |
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Preference number: 5 (lower is better) Translates to: SETKSTDLGSKLLIFSACWALAV*ASVDNV Trigger: CACATTATCCACTGATGCCAACACGGCCAGTGCCCA...ACATGCAGAGAAGATGAGTAATTTGCTACCCAGGTCAGTGGACTTAGTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| CDS TCA 90 bp | CAAAGGCCGCCTGTCTGGAATCCCATGGCAGATGACTTCATTCACTaGGGTACAACAAGACTTTGGGAAGTTATAGTAATTCAGGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: QRPPVWNPMADDFIH*GTTRLWEVIVIQGR Trigger: TCTCCCCTGAATTACTATAACTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATCTGCCATGGGATTCCAGACAGGCGGCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS TCA 90 bp | TATCACCTTCTTGCAAAGGCCGCCTGTCTGGAATCCCATGGCAGATaGCTTCATTCACTGAGGTACAACAAGACTTTGGGAAGTTATAGT | + |
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Preference number: 5 (lower is better) Translates to: YHLLAKAACLESHGR*LHSLRYNKTLGSYS Trigger: ACTATAACTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATCTGCCATGGGATTCCAGACAGGCGGCCTTTGCAAGAAGGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR CAA 90 bp | CAAGGATACTCTTGTGACAACTTTATCCTCTGGTGTTTGAACCACCACCGAGGAAAGGATAGCAATTTCTaGCAATGCATGCTAAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: QGYSCDNFILWCLNHHRGKDSNF*QCMLSV Trigger: TACACTTAGCATGCATTGCAAGAAATTGCTATCCTT...TCCTCGGTGGTGGTTCAAACACCAGAGGATAAAGTTGTCACAAGAGTATCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS-3UTR CAA 90 bp | ATCTGGAGCAACATGTTGCTAAAGTTTCAAGATTTCTCATCTCCAACCTTCTGTGCTGTATGGAAAAGTTaGTGGATCCCATGCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: IWSNMLLKFQDFSSPTFCAVWKS*WIPCPQ Trigger: TTGTGGGCATGGGATCCACAAACTTTTCCATACAGC...ACAGAAGGTTGGAGATGAGAAATCTTGAAACTTTAGCAACATGTTGCTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS TCA 72 bp | CAGCCAGTGTCCGTGACCAGCAGGGTGTGCTCAAACTaGGCAGATCGCTTCCCGTCCCTCGTCACTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QPVSVTSRVCSN*ADRFPSLVTAV Trigger: GACTGCAGTGACGAGGGACGGGAAGCGATCTGCTCAGTTTGAGCACACCCTGCTGGTCACGGACACTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000198700.2 |
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| CDS CCA 72 bp | GTCAGCATAGTCCGGCCTCTGAATGTAACTGGGCACTaGCCGTGTTGGCATCAGTGGATAATGTGGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VSIVRPLNVTGH*PCWHQWIMWPE Trigger: CTCAGGCCACATTATCCACTGATGCCAACACGGCCAGTGCCCAGTTACATTCAGAGGCCGGACTATGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000197531.2 |
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| CDS CCA 72 bp | AGGGATGGTCAGCATAGTCCGGCCTCTGAATGTAACTaGGCACTGGCCGTGTTGGCATCAGTGGATAATGTG | + |
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Preference number: 6 (lower is better) Translates to: RDGQHSPASECN*ALAVLASVDNV Trigger: CACATTATCCACTGATGCCAACACGGCCAGTGCCCAGTTACATTCAGAGGCCGGACTATGCTGACCATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029804.13 ENSMUST00000197531.2 |
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| CDS TCA 72 bp | CTTGCAAAGGCCGCCTGTCTGGAATCCCATGGCAGATaGCTTCATTCACTGAGGTACAACAAGACTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LAKAACLESHGR*LHSLRYNKTLG Trigger: TCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATCTGCCATGGGATTCCAGACAGGCGGCCTTTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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| CDS TCA 72 bp | CAGATAATGAAGCCCACAAACTGCACACTGTGGAGATaGGCCAAGCAGGACTTACCTAAGGGATGGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QIMKPTNCTLWR*AKQDLPKGWSA Trigger: TGCTGACCATCCCTTAGGTAAGTCCTGCTTGGCTCATCTCCACAGTGTGCAGTTTGTGGGCTTCATTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197531.2 |
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| CDS TCA 72 bp | CCTGTCTGGAATCCCATGGCAGATGACTTCATTCACTaGGGTACAACAAGACTTTGGGAAGTTATAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: PVWNPMADDFIH*GTTRLWEVIVI Trigger: AATTACTATAACTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATCTGCCATGGGATTCCAGACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029804.13 |
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